Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1183950 | XP_024629162.1 | 89.269 | 438 | 47 | 0 | 1 | 438 | 1 | 438 | 0.0 | 776 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1183950 | sp|A3KPW7|PTAR1_DANRE | 32.900 | 231 | 112 | 7 | 143 | 334 | 93 | 319 | 7.06e-25 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0606720 | Msa1183950 | 0.817757 | 2.794966e-52 | -8.615850e-47 |
| Msa0709400 | Msa1183950 | 0.820016 | 8.569281e-53 | -8.615850e-47 |
| Msa0189320 | Msa1183950 | 0.851189 | 1.043659e-60 | -8.615850e-47 |
| Msa0398670 | Msa1183950 | 0.838392 | 2.956177e-57 | -8.615850e-47 |
| Msa0240920 | Msa1183950 | 0.856357 | 3.397020e-62 | -8.615850e-47 |
| Msa0271510 | Msa1183950 | 0.869800 | 2.360085e-66 | -8.615850e-47 |
| Msa0334550 | Msa1183950 | 0.814649 | 1.383231e-51 | -8.615850e-47 |
| Msa1124960 | Msa1183950 | 0.803449 | 3.467483e-49 | -8.615850e-47 |
| Msa1183950 | Msa1228520 | 0.883347 | 4.846372e-71 | -8.615850e-47 |
| Msa1183950 | Msa1385770 | 0.800596 | 1.337912e-48 | -8.615850e-47 |
| Msa1183950 | Msa1405310 | 0.997126 | 2.670024e-237 | -8.615850e-47 |
| Msa1183950 | Msa1409240 | 0.802788 | 4.751085e-49 | -8.615850e-47 |
| Msa1183950 | Msa1419690 | 0.814316 | 1.639536e-51 | -8.615850e-47 |
| Msa1183950 | Msa1434140 | 0.801617 | 8.275905e-49 | -8.615850e-47 |
| Msa1183950 | Msa1440200 | 0.805712 | 1.169148e-49 | -8.615850e-47 |
| Msa1183950 | Msa1453610 | 0.808617 | 2.835929e-50 | -8.615850e-47 |
| Msa0567350 | Msa1183950 | 0.816637 | 4.990796e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1183950 | MtrunA17_Chr8g0335281 | 83.871 | 465 | 48 | 1 | 1 | 438 | 1 | 465 | 0.0 | 760 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1183950 | AT1G10095.1 | 48.655 | 446 | 194 | 7 | 1 | 438 | 1 | 419 | 1.38e-132 | 389 |
| Msa1183950 | AT1G10095.2 | 50.118 | 425 | 177 | 7 | 1 | 416 | 1 | 399 | 4.39e-132 | 387 |
| Msa1183950 | AT1G10095.3 | 51.818 | 330 | 126 | 5 | 1 | 323 | 1 | 304 | 8.80e-106 | 316 |
| Msa1183950 | AT1G10095.4 | 51.672 | 329 | 126 | 5 | 1 | 322 | 1 | 303 | 2.96e-105 | 314 |
Find 96 sgRNAs with CRISPR-Local
Find 467 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATTTCAAAGAGATTT+TGG | 0.053225 | 8_1:-19483076 | Msa1183950:CDS |
| CTTTATTTGTAAAATTATTT+TGG | 0.061723 | 8_1:+19479246 | None:intergenic |
| ACTCCAAGCTTGTTCACTTT+TGG | 0.178561 | 8_1:+19483423 | None:intergenic |
| TGTAGATTTGAAGACCTTAT+TGG | 0.188433 | 8_1:-19479603 | Msa1183950:CDS |
| AAAGTATAGTTTCTCTTGTT+TGG | 0.245840 | 8_1:+19484635 | None:intergenic |
| TTGGAACAGAGATCATAAAT+TGG | 0.250447 | 8_1:-19484613 | Msa1183950:CDS |
| CTGCTCCTTGACTTGAGATA+TGG | 0.265621 | 8_1:+19479510 | None:intergenic |
| CTTCATTTAACAATGAAAAC+TGG | 0.275914 | 8_1:+19484736 | None:intergenic |
| GAACAGTAACACAATGGTTT+TGG | 0.279747 | 8_1:-19487092 | Msa1183950:five_prime_UTR |
| TAGAAATTCAGAATCGAAAT+TGG | 0.280241 | 8_1:+19487062 | None:intergenic |
| AATGAAGAGTCTAATTCTTA+TGG | 0.301067 | 8_1:-19485812 | Msa1183950:CDS |
| AACAAGAGAAACTATACTTT+TGG | 0.306893 | 8_1:-19484632 | Msa1183950:CDS |
| TTCTGAAAGCTGATTCAAAA+AGG | 0.315689 | 8_1:-19487038 | Msa1183950:intron |
| TTATGACTGCTTGGAATTGC+AGG | 0.316298 | 8_1:-19484395 | Msa1183950:intron |
| TGTAAGTTGTAGCACAAAAT+AGG | 0.316702 | 8_1:-19479180 | Msa1183950:three_prime_UTR |
| TGTTTCTTGTTTCATACTAT+AGG | 0.339556 | 8_1:+19479048 | None:intergenic |
| GCGGAAGAATCTGCATCTTA+TGG | 0.356630 | 8_1:-19481522 | Msa1183950:CDS |
| AAATGAAGAATCTGGCATTT+CGG | 0.372365 | 8_1:-19484721 | Msa1183950:CDS |
| ATGCAGTGCAGCCCAACTTC+TGG | 0.379066 | 8_1:+19481764 | None:intergenic |
| GTCGCTTTCTTTCCACGTGC+TGG | 0.380037 | 8_1:-19479955 | Msa1183950:CDS |
| GTGAACAAGCTTGGAGTCAT+AGG | 0.403674 | 8_1:-19483417 | Msa1183950:intron |
| TGGAACAGAGATCATAAATT+GGG | 0.406123 | 8_1:-19484612 | Msa1183950:CDS |
| CCGTACATCAATCAGCAAAC+AGG | 0.410034 | 8_1:-19484680 | Msa1183950:CDS |
| CTATTATTACCTTCACTGCT+TGG | 0.412692 | 8_1:+19481481 | None:intergenic |
| CAGCAAGTGCCCAAGCCTCT+TGG | 0.415655 | 8_1:-19479653 | Msa1183950:CDS |
| AGTTCATTTCCAAGAGGCTT+GGG | 0.418687 | 8_1:+19479644 | None:intergenic |
| GTGCTTGGAATCACCGTTGC+TGG | 0.420371 | 8_1:-19482607 | Msa1183950:CDS |
| TTAAATAGAGAAGATTTCTC+AGG | 0.421703 | 8_1:+19479569 | None:intergenic |
| TCATTGTTAAATGAAGAATC+TGG | 0.425321 | 8_1:-19484729 | Msa1183950:CDS |
| CTGTTTGCTGATTGATGTAC+GGG | 0.432375 | 8_1:+19484681 | None:intergenic |
| GCTAGCATGTTTCATGACTT+TGG | 0.434326 | 8_1:-19479878 | Msa1183950:CDS |
| TAAACAAAGTTCAATGTTGT+CGG | 0.441931 | 8_1:+19484497 | None:intergenic |
| ATTCTGCTAGTTACATACTT+TGG | 0.453158 | 8_1:-19479769 | Msa1183950:CDS |
| TGCTCCTTGACTTGAGATAT+GGG | 0.453784 | 8_1:+19479511 | None:intergenic |
| CAAAGATGAATTATCGTGCT+TGG | 0.454642 | 8_1:-19482622 | Msa1183950:CDS |
| CCTGTTTGCTGATTGATGTA+CGG | 0.455661 | 8_1:+19484680 | None:intergenic |
| CTCATACATGACTAAAGAAC+AGG | 0.456796 | 8_1:-19482579 | Msa1183950:intron |
| AAGTCAAGGAGCAGGAGTTT+CGG | 0.461495 | 8_1:-19479501 | Msa1183950:three_prime_UTR |
| CAGAATATGTGGCTTGTGCT+TGG | 0.464432 | 8_1:+19479786 | None:intergenic |
| AGGGCATGACTTATCCAATA+AGG | 0.468882 | 8_1:+19479589 | None:intergenic |
| AGTTGAAGAAATCCAGAAGT+TGG | 0.470128 | 8_1:-19481776 | Msa1183950:CDS |
| TTTGGATCCAGTGATGAGCT+GGG | 0.471807 | 8_1:-19484774 | Msa1183950:intron |
| GAGTTCATTTCCAAGAGGCT+TGG | 0.484081 | 8_1:+19479643 | None:intergenic |
| CACCCAAAAGTGAACAAGCT+TGG | 0.486777 | 8_1:-19483426 | Msa1183950:CDS |
| GCGGTTACTGCAGAAAATTA+TGG | 0.487418 | 8_1:-19481559 | Msa1183950:CDS |
| TTACATACTTTGGTTGAAAG+TGG | 0.487489 | 8_1:-19479759 | Msa1183950:intron |
| AAACATGCTAGCTTCCTCCT+TGG | 0.501239 | 8_1:+19479889 | None:intergenic |
| AGCTTCCTCCTTGGAATGGT+CGG | 0.501888 | 8_1:+19479898 | None:intergenic |
| TTTGTCAGGACGAACTCGAT+TGG | 0.506946 | 8_1:-19480652 | Msa1183950:intron |
| TAATTCTTATGGAAATGCTA+CGG | 0.511716 | 8_1:-19485801 | Msa1183950:CDS |
| TACGGGTCTCTTGCATCAGC+TGG | 0.514712 | 8_1:-19485783 | Msa1183950:CDS |
| CAGATTCTTCCGCATTACTT+CGG | 0.515451 | 8_1:+19481532 | None:intergenic |
| GTTGAAGAAATCCAGAAGTT+GGG | 0.520728 | 8_1:-19481775 | Msa1183950:CDS |
| GCTGTGACTTTATGACTGCT+TGG | 0.521973 | 8_1:-19484404 | Msa1183950:CDS |
| TTTAACAATGAAAACTGGGA+TGG | 0.522744 | 8_1:+19484741 | None:intergenic |
| TATTGATAAAGCGTTATGTC+GGG | 0.530806 | 8_1:-19480622 | Msa1183950:CDS |
| AATTCTTATGGAAATGCTAC+GGG | 0.531467 | 8_1:-19485800 | Msa1183950:CDS |
| TAAATAGAGAAGATTTCTCA+GGG | 0.532114 | 8_1:+19479570 | None:intergenic |
| TTTCTAACTGATTCTAGTGA+CGG | 0.533549 | 8_1:-19479923 | Msa1183950:CDS |
| TTCATTTAACAATGAAAACT+GGG | 0.534643 | 8_1:+19484737 | None:intergenic |
| CAAAATAATAAACAATACAT+AGG | 0.536084 | 8_1:+19479442 | None:intergenic |
| TATGTAACTAGCAGAATATG+TGG | 0.536777 | 8_1:+19479775 | None:intergenic |
| GGCGTTTAAACAATACAAGA+TGG | 0.537525 | 8_1:-19484532 | Msa1183950:CDS |
| ATTAGTGTCTAAGAAGAAGC+AGG | 0.548077 | 8_1:-19483500 | Msa1183950:CDS |
| CTACATCTCTTATCTTCTCA+AGG | 0.549991 | 8_1:+19479621 | None:intergenic |
| TGTTTAGCAGCTCTATATAA+CGG | 0.552466 | 8_1:+19484567 | None:intergenic |
| CATATCTCAAGTCAAGGAGC+AGG | 0.555571 | 8_1:-19479509 | Msa1183950:three_prime_UTR |
| GGGGAAAGAATCTGAGCTTG+TGG | 0.560130 | 8_1:-19483055 | Msa1183950:CDS |
| TGCTAGCTTCCTCCTTGGAA+TGG | 0.562432 | 8_1:+19479894 | None:intergenic |
| CAGCAAAAGTCGAGGTGTGA+AGG | 0.567112 | 8_1:+19479828 | None:intergenic |
| GTATGCTTTCAAGATGGTCA+TGG | 0.570789 | 8_1:+19484460 | None:intergenic |
| ATATTGATAAAGCGTTATGT+CGG | 0.571042 | 8_1:-19480623 | Msa1183950:CDS |
| GCTATACATCAATAATGTAT+CGG | 0.584070 | 8_1:+19479070 | None:intergenic |
| TATGCTTTCAAGATGGTCAT+GGG | 0.585632 | 8_1:+19484461 | None:intergenic |
| ACATAATTCATTCTGCAGAA+AGG | 0.585680 | 8_1:+19479853 | None:intergenic |
| TCAAAAGTATGCTTTCAAGA+TGG | 0.587892 | 8_1:+19484454 | None:intergenic |
| TTGGATCCAGTGATGAGCTG+GGG | 0.598597 | 8_1:-19484773 | Msa1183950:intron |
| GCGTTTAAACAATACAAGAT+GGG | 0.601607 | 8_1:-19484531 | Msa1183950:CDS |
| AAAATTATTTATCCAGCACG+TGG | 0.606857 | 8_1:+19479943 | None:intergenic |
| TATTTGCACAAATCACTCGT+CGG | 0.606960 | 8_1:+19479212 | None:intergenic |
| TGCTAAACATGCATTTATGA+CGG | 0.607063 | 8_1:-19484553 | Msa1183950:CDS |
| AGTTCCCATATCTCAAGTCA+AGG | 0.608361 | 8_1:-19479515 | Msa1183950:three_prime_UTR |
| TGACGGATCCGACCATTCCA+AGG | 0.613951 | 8_1:-19479906 | Msa1183950:CDS |
| CGTACATCAATCAGCAAACA+GGG | 0.623280 | 8_1:-19484679 | Msa1183950:CDS |
| GGGTCTCTTGCATCAGCTGG+AGG | 0.626069 | 8_1:-19485780 | Msa1183950:CDS |
| AGATGGTCATGGGATACTGA+AGG | 0.627744 | 8_1:+19484471 | None:intergenic |
| AAAGCGTTATGTCGGGAGAG+AGG | 0.643432 | 8_1:-19480615 | Msa1183950:intron |
| TCAAGGAGTTCATTTCCAAG+AGG | 0.647521 | 8_1:+19479638 | None:intergenic |
| TGTATGAGATTAGCCAGCAA+CGG | 0.659532 | 8_1:+19482594 | None:intergenic |
| TTATATTGTCCAAGCAGTGA+AGG | 0.660492 | 8_1:-19481490 | Msa1183950:intron |
| TATGGAGGACCGAAGTAATG+CGG | 0.664604 | 8_1:-19481541 | Msa1183950:CDS |
| ATCGTCATCAGCAAAAGTCG+AGG | 0.675500 | 8_1:+19479820 | None:intergenic |
| TGGTCATGGGATACTGAAGG+AGG | 0.684375 | 8_1:+19484474 | None:intergenic |
| GTTACTGCAGAAAATTATGG+AGG | 0.691465 | 8_1:-19481556 | Msa1183950:CDS |
| TTGAACGAACAGTAACACAA+TGG | 0.693167 | 8_1:-19487098 | Msa1183950:five_prime_UTR |
| CGGATCCGACCATTCCAAGG+AGG | 0.730357 | 8_1:-19479903 | Msa1183950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCTTAATAAAAAATTG+GGG | + | chr8_1:19480459-19480478 | None:intergenic | 10.0% |
| !! | CAAATTTCTTAATAAAAAAT+TGG | + | chr8_1:19480461-19480480 | None:intergenic | 10.0% |
| !!! | ATTTTTTATTAAGAAATTTG+TGG | - | chr8_1:19480461-19480480 | Msa1183950:intron | 10.0% |
| !!! | TTTTTTATTAAGAAATTTGT+GGG | - | chr8_1:19480462-19480481 | Msa1183950:intron | 10.0% |
| !!! | TGATTAATATATTTTTAAGA+TGG | - | chr8_1:19480749-19480768 | Msa1183950:intron | 10.0% |
| !! | ATATTTATTAAACGAAAAAT+TGG | + | chr8_1:19481173-19481192 | None:intergenic | 10.0% |
| !! | AAAACATAATATAAAGTTTA+AGG | + | chr8_1:19482484-19482503 | None:intergenic | 10.0% |
| !!! | TTAATATTTTTAATACAACA+TGG | + | chr8_1:19483306-19483325 | None:intergenic | 10.0% |
| !!! | AAAAATATATTTGAGTTTTT+CGG | + | chr8_1:19484181-19484200 | None:intergenic | 10.0% |
| !! | AACTAATAATAAACATAAAA+TGG | + | chr8_1:19485564-19485583 | None:intergenic | 10.0% |
| !!! | CTTTATTTGTAAAATTATTT+TGG | + | chr8_1:19486903-19486922 | None:intergenic | 10.0% |
| !!! | TTTTTATGTAATTCTTTGAT+CGG | - | chr8_1:19479481-19479500 | Msa1183950:three_prime_UTR | 15.0% |
| !! | ATGTAATATGTACATATTAT+AGG | - | chr8_1:19479931-19479950 | Msa1183950:CDS | 15.0% |
| !! | TGTAATATGTACATATTATA+GGG | - | chr8_1:19479932-19479951 | Msa1183950:CDS | 15.0% |
| !! | AAAAGAAAGAAAAAAAACAA+CGG | + | chr8_1:19480263-19480282 | None:intergenic | 15.0% |
| !!! | ATATATTTTTAAGATGGAAA+TGG | - | chr8_1:19480755-19480774 | Msa1183950:intron | 15.0% |
| !! | CTAAAGAAAAATATATGTAA+TGG | + | chr8_1:19481017-19481036 | None:intergenic | 15.0% |
| !! | AGAAAATATAAAAAGATAAG+AGG | + | chr8_1:19481781-19481800 | None:intergenic | 15.0% |
| !! | AATTTGACAATAGAAAATTA+GGG | + | chr8_1:19482844-19482863 | None:intergenic | 15.0% |
| !! | AAATTTGACAATAGAAAATT+AGG | + | chr8_1:19482845-19482864 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCTTTAACATCTT+TGG | - | chr8_1:19483265-19483284 | Msa1183950:intron | 15.0% |
| !! | TTTCAATAAAAAGTTAAACA+TGG | - | chr8_1:19483947-19483966 | Msa1183950:intron | 15.0% |
| !!! | AACTATTTTTTCACATATTT+TGG | + | chr8_1:19484001-19484020 | None:intergenic | 15.0% |
| !! | AAAAATTGATTGAAATTGAA+AGG | - | chr8_1:19485002-19485021 | Msa1183950:intron | 15.0% |
| !!! | GAATGAAGATATTATTTTAA+TGG | + | chr8_1:19485647-19485666 | None:intergenic | 15.0% |
| !!! | TTTATATTTTATTGAAACAC+CGG | + | chr8_1:19485738-19485757 | None:intergenic | 15.0% |
| !! | CAAAATAATAAACAATACAT+AGG | + | chr8_1:19486707-19486726 | None:intergenic | 15.0% |
| !!! | AATTTTACAAATAAAGATTC+AGG | - | chr8_1:19486907-19486926 | Msa1183950:intron | 15.0% |
| !! | TAAAAAAAGAACTTGTAGAT+AGG | - | chr8_1:19479807-19479826 | Msa1183950:CDS | 20.0% |
| !! | AATATGTACATATTACATGA+GGG | + | chr8_1:19479929-19479948 | None:intergenic | 20.0% |
| !! | TAATATGTACATATTACATG+AGG | + | chr8_1:19479930-19479949 | None:intergenic | 20.0% |
| !!! | TAAAATTTTCCTGAAAATTC+TGG | - | chr8_1:19480071-19480090 | Msa1183950:intron | 20.0% |
| !!! | GATTCTTTTATTGTTCTAAT+AGG | - | chr8_1:19480120-19480139 | Msa1183950:intron | 20.0% |
| !! | AAGGAATCAATTTCTATAAA+GGG | + | chr8_1:19480240-19480259 | None:intergenic | 20.0% |
| !! | TTCATTTAACAATGAAAACT+GGG | + | chr8_1:19481412-19481431 | None:intergenic | 20.0% |
| !!! | AATCCAGAATATCTAAAATA+TGG | + | chr8_1:19482266-19482285 | None:intergenic | 20.0% |
| !!! | AGCTTATTGTATGATTTTTT+TGG | - | chr8_1:19482361-19482380 | Msa1183950:intron | 20.0% |
| !!! | TATGATTTTTTTGGCTTTAT+TGG | - | chr8_1:19482370-19482389 | Msa1183950:intron | 20.0% |
| !!! | TGATTTTATGACTTCATATT+TGG | - | chr8_1:19482432-19482451 | Msa1183950:intron | 20.0% |
| !!! | AATGACATTCTAGAATTATA+AGG | - | chr8_1:19482534-19482553 | Msa1183950:intron | 20.0% |
| !!! | AATATTTATCCTTTTGTGAT+GGG | + | chr8_1:19482786-19482805 | None:intergenic | 20.0% |
| !!! | AAATATTTATCCTTTTGTGA+TGG | + | chr8_1:19482787-19482806 | None:intergenic | 20.0% |
| !!! | AAAGGATAAATATTTTTCAG+AGG | - | chr8_1:19482792-19482811 | Msa1183950:intron | 20.0% |
| !!! | TTCAAATTTCAAAGAGATTT+TGG | - | chr8_1:19483070-19483089 | Msa1183950:CDS | 20.0% |
| !!! | TCAAATTTCAAAGAGATTTT+GGG | - | chr8_1:19483071-19483090 | Msa1183950:CDS | 20.0% |
| !! | AGAATTGCATACTATTTAAT+TGG | - | chr8_1:19483143-19483162 | Msa1183950:intron | 20.0% |
| !! | TTACTAGTATATACTAACAT+TGG | - | chr8_1:19483225-19483244 | Msa1183950:intron | 20.0% |
| !!! | TTTGATCTCTGAAAATTAAA+GGG | + | chr8_1:19483508-19483527 | None:intergenic | 20.0% |
| !! | ACATTATATCAACCAAAAAT+GGG | + | chr8_1:19483855-19483874 | None:intergenic | 20.0% |
| !! | TACATTATATCAACCAAAAA+TGG | + | chr8_1:19483856-19483875 | None:intergenic | 20.0% |
| !! | AACTATAGTGCAAATAAAAA+CGG | - | chr8_1:19484217-19484236 | Msa1183950:intron | 20.0% |
| !! | TTTGTCAATGATTTGATTAA+TGG | - | chr8_1:19484298-19484317 | Msa1183950:intron | 20.0% |
| !! | TTGTCAATGATTTGATTAAT+GGG | - | chr8_1:19484299-19484318 | Msa1183950:intron | 20.0% |
| !! | AATTAAAGATGTGCTTATTT+AGG | - | chr8_1:19484338-19484357 | Msa1183950:intron | 20.0% |
| !! | ATAAATGAAATAAATGAGCA+AGG | + | chr8_1:19484691-19484710 | None:intergenic | 20.0% |
| !! | ATATCTTCATTCATTATCTA+TGG | - | chr8_1:19485655-19485674 | Msa1183950:intron | 20.0% |
| !! | TATCTTCATTCATTATCTAT+GGG | - | chr8_1:19485656-19485675 | Msa1183950:intron | 20.0% |
| !! | AGAAATTTAAATGCATATCT+AGG | - | chr8_1:19485938-19485957 | Msa1183950:intron | 20.0% |
| !! | TAGAAAAACATATTGTATTC+GGG | + | chr8_1:19486109-19486128 | None:intergenic | 20.0% |
| !! | GTAGAAAAACATATTGTATT+CGG | + | chr8_1:19486110-19486129 | None:intergenic | 20.0% |
| !!! | CCTAATTTTCTCTTATAAAT+AGG | + | chr8_1:19486751-19486770 | None:intergenic | 20.0% |
| !! | CCTATTTATAAGAGAAAATT+AGG | - | chr8_1:19486748-19486767 | Msa1183950:intron | 20.0% |
| !! | TCAACAAAAGTTAATGTATT+TGG | - | chr8_1:19486771-19486790 | Msa1183950:intron | 20.0% |
| ! | TAGAAATTCAGAATCGAAAT+TGG | + | chr8_1:19479087-19479106 | None:intergenic | 25.0% |
| !!! | TATTTCGTAATGTTTGTTGT+GGG | - | chr8_1:19479152-19479171 | Msa1183950:three_prime_UTR | 25.0% |
| !! | CATTTTATCAAACAGGTAAT+GGG | + | chr8_1:19479229-19479248 | None:intergenic | 25.0% |
| ! | TTCAGACAAAAGTGAAAAAT+GGG | + | chr8_1:19479300-19479319 | None:intergenic | 25.0% |
| ! | ATTCAGACAAAAGTGAAAAA+TGG | + | chr8_1:19479301-19479320 | None:intergenic | 25.0% |
| ! | TATTGAAACTTATCATGTTG+TGG | - | chr8_1:19479357-19479376 | Msa1183950:intron | 25.0% |
| !! | ATTATTTTCCTAGTCATACA+AGG | + | chr8_1:19479444-19479463 | None:intergenic | 25.0% |
| ! | TAATTCTTTGATCGGAAAAT+GGG | - | chr8_1:19479489-19479508 | Msa1183950:three_prime_UTR | 25.0% |
| ! | GCTTATACATAAATGCTTAT+AGG | - | chr8_1:19479658-19479677 | Msa1183950:intron | 25.0% |
| !!! | CTACAAGTTCTTTTTTTAGA+AGG | + | chr8_1:19479805-19479824 | None:intergenic | 25.0% |
| ! | TATGCTATAAACGTTCAATT+AGG | - | chr8_1:19479834-19479853 | Msa1183950:CDS | 25.0% |
| !! | AGATTTAAACCAGAATTTTC+AGG | + | chr8_1:19480083-19480102 | None:intergenic | 25.0% |
| ! | GAAGGAATCAATTTCTATAA+AGG | + | chr8_1:19480241-19480260 | None:intergenic | 25.0% |
| !!! | TTCTTTTTGTTCTTTGAAGT+TGG | - | chr8_1:19480276-19480295 | Msa1183950:intron | 25.0% |
| !!! | GTTTTTACTGACTATACAAA+AGG | + | chr8_1:19480304-19480323 | None:intergenic | 25.0% |
| ! | AATGAAGAGTCTAATTCTTA+TGG | - | chr8_1:19480334-19480353 | Msa1183950:intron | 25.0% |
| ! | TAATTCTTATGGAAATGCTA+CGG | - | chr8_1:19480345-19480364 | Msa1183950:intron | 25.0% |
| ! | TTCATAAAAGTAGAATGGTA+AGG | + | chr8_1:19480833-19480852 | None:intergenic | 25.0% |
| !! | CACTTTTCATAAAAGTAGAA+TGG | + | chr8_1:19480838-19480857 | None:intergenic | 25.0% |
| ! | GTCATTCAAAATTGTTAGAA+AGG | - | chr8_1:19480877-19480896 | Msa1183950:intron | 25.0% |
| !! | CAAATTTTGAGCAATTACTT+AGG | + | chr8_1:19480953-19480972 | None:intergenic | 25.0% |
| ! | CTAAGTAATTGCTCAAAATT+TGG | - | chr8_1:19480951-19480970 | Msa1183950:intron | 25.0% |
| ! | TAATTGCTCAAAATTTGGAA+GGG | - | chr8_1:19480956-19480975 | Msa1183950:intron | 25.0% |
| !! | ATATTGATTAACATGAACAC+AGG | + | chr8_1:19481068-19481087 | None:intergenic | 25.0% |
| ! | ATGTTAATCAATATACCATG+TGG | - | chr8_1:19481074-19481093 | Msa1183950:intron | 25.0% |
| ! | CTTCATTTAACAATGAAAAC+TGG | + | chr8_1:19481413-19481432 | None:intergenic | 25.0% |
| ! | TCATTGTTAAATGAAGAATC+TGG | - | chr8_1:19481417-19481436 | Msa1183950:intron | 25.0% |
| ! | AAAGTATAGTTTCTCTTGTT+TGG | + | chr8_1:19481514-19481533 | None:intergenic | 25.0% |
| !! | AACAAGAGAAACTATACTTT+TGG | - | chr8_1:19481514-19481533 | Msa1183950:CDS | 25.0% |
| ! | TAAACAAAGTTCAATGTTGT+CGG | + | chr8_1:19481652-19481671 | None:intergenic | 25.0% |
| !! | ATTGTTTTCAGTTGCTTAAA+AGG | - | chr8_1:19481854-19481873 | Msa1183950:intron | 25.0% |
| ! | GAACCAAGATAAAAAGATAA+AGG | - | chr8_1:19481876-19481895 | Msa1183950:intron | 25.0% |
| ! | ATAACGACTCTAATTATACA+GGG | + | chr8_1:19482105-19482124 | None:intergenic | 25.0% |
| ! | CAAATATACATATTGAGGTA+CGG | + | chr8_1:19482242-19482261 | None:intergenic | 25.0% |
| ! | ATGGTCAAATATACATATTG+AGG | + | chr8_1:19482247-19482266 | None:intergenic | 25.0% |
| !!! | TGACCATATTTTAGATATTC+TGG | - | chr8_1:19482260-19482279 | Msa1183950:intron | 25.0% |
| ! | GTTCAAAATTTGAGCATATA+TGG | + | chr8_1:19482822-19482841 | None:intergenic | 25.0% |
| !! | CAAATTTCAAAGAGATTTTG+GGG | - | chr8_1:19483072-19483091 | Msa1183950:CDS | 25.0% |
| !! | TTGATCTCTGAAAATTAAAG+GGG | + | chr8_1:19483507-19483526 | None:intergenic | 25.0% |
| !! | CTTTGATCTCTGAAAATTAA+AGG | + | chr8_1:19483509-19483528 | None:intergenic | 25.0% |
| !!! | TTTCACATATTTTGGTGAAA+GGG | + | chr8_1:19483993-19484012 | None:intergenic | 25.0% |
| !!! | TTTTCACATATTTTGGTGAA+AGG | + | chr8_1:19483994-19484013 | None:intergenic | 25.0% |
| ! | CAAAGAAATCATATTTCGTA+TGG | + | chr8_1:19484282-19484301 | None:intergenic | 25.0% |
| ! | TGTCAATGATTTGATTAATG+GGG | - | chr8_1:19484300-19484319 | Msa1183950:intron | 25.0% |
| ! | TAAAACTAGATAGCAATCAA+AGG | + | chr8_1:19484775-19484794 | None:intergenic | 25.0% |
| ! | ATGTAAACTACAAACATGAA+AGG | + | chr8_1:19484918-19484937 | None:intergenic | 25.0% |
| ! | ATTGAAAGGCAAGATAAAAT+TGG | - | chr8_1:19485016-19485035 | Msa1183950:intron | 25.0% |
| ! | AATAATATAACATCCCTATG+AGG | - | chr8_1:19485170-19485189 | Msa1183950:intron | 25.0% |
| !! | TAAATTATAGTCTTGATCGT+TGG | - | chr8_1:19485256-19485275 | Msa1183950:intron | 25.0% |
| ! | TATACTAGTAAAGCTATACA+AGG | + | chr8_1:19485437-19485456 | None:intergenic | 25.0% |
| !! | ATATTGATAAAGCGTTATGT+CGG | - | chr8_1:19485523-19485542 | Msa1183950:intron | 25.0% |
| ! | AACAATTTCATGAAAAGTCT+CGG | + | chr8_1:19485707-19485726 | None:intergenic | 25.0% |
| ! | ATCTATAACCAAGGTAAAAA+GGG | + | chr8_1:19485833-19485852 | None:intergenic | 25.0% |
| !!! | ACTTTGTTTTACTCCTAATT+AGG | + | chr8_1:19485980-19485999 | None:intergenic | 25.0% |
| ! | TATAAATGTAAATGTGGCTT+TGG | + | chr8_1:19486082-19486101 | None:intergenic | 25.0% |
| ! | GGAATCTATAAATGTAAATG+TGG | + | chr8_1:19486088-19486107 | None:intergenic | 25.0% |
| !!! | CTATAGTAAGTTGTTTTAGA+TGG | - | chr8_1:19486129-19486148 | Msa1183950:intron | 25.0% |
| !!! | TAATGTTGTTCGTTTTAAAC+AGG | - | chr8_1:19486153-19486172 | Msa1183950:intron | 25.0% |
| ! | CTTATCTAGATTACTTAATC+AGG | - | chr8_1:19486451-19486470 | Msa1183950:intron | 25.0% |
| ! | TAAATAGAGAAGATTTCTCA+GGG | + | chr8_1:19486579-19486598 | None:intergenic | 25.0% |
| ! | TTAAATAGAGAAGATTTCTC+AGG | + | chr8_1:19486580-19486599 | None:intergenic | 25.0% |
| !! | TTTTCTCTTATAAATAGGAC+CGG | + | chr8_1:19486746-19486765 | None:intergenic | 25.0% |
| ! | CCTATTTATAAGAGAAACTT+GGG | + | chr8_1:19486833-19486852 | None:intergenic | 25.0% |
| ! | TCCTATTTATAAGAGAAACT+TGG | + | chr8_1:19486834-19486853 | None:intergenic | 25.0% |
| !! | AGTTTTTCCTTGCAAATTTT+TGG | - | chr8_1:19486870-19486889 | Msa1183950:intron | 25.0% |
| !! | GTTTTTCCTTGCAAATTTTT+GGG | - | chr8_1:19486871-19486890 | Msa1183950:intron | 25.0% |
| ! | GCTATACATCAATAATGTAT+CGG | + | chr8_1:19487079-19487098 | None:intergenic | 25.0% |
| !! | TGTTTCTTGTTTCATACTAT+AGG | + | chr8_1:19487101-19487120 | None:intergenic | 25.0% |
| ! | AACAGTAACACAATGGTTTT+GGG | - | chr8_1:19479055-19479074 | Msa1183950:three_prime_UTR | 30.0% |
| ! | TTCTGAAAGCTGATTCAAAA+AGG | - | chr8_1:19479108-19479127 | Msa1183950:three_prime_UTR | 30.0% |
| !! | AAAAAGGTATTTGTCTACAC+TGG | - | chr8_1:19479124-19479143 | Msa1183950:three_prime_UTR | 30.0% |
| ! | CTATTTCGTAATGTTTGTTG+TGG | - | chr8_1:19479151-19479170 | Msa1183950:three_prime_UTR | 30.0% |
| AACAAAAACTGAACACAGAT+CGG | + | chr8_1:19479197-19479216 | None:intergenic | 30.0% | |
| ! | GCATTTTATCAAACAGGTAA+TGG | + | chr8_1:19479230-19479249 | None:intergenic | 30.0% |
| ! | GAATTGGCATTTTATCAAAC+AGG | + | chr8_1:19479236-19479255 | None:intergenic | 30.0% |
| TATCCTACAAAAGCAAGAAT+TGG | + | chr8_1:19479252-19479271 | None:intergenic | 30.0% | |
| TTGTAGGATAGTGTAAAGTT+TGG | - | chr8_1:19479262-19479281 | Msa1183950:three_prime_UTR | 30.0% | |
| TAAATGATGATTTGAGCTTC+CGG | - | chr8_1:19479385-19479404 | Msa1183950:intron | 30.0% | |
| GTAATTCTTTGATCGGAAAA+TGG | - | chr8_1:19479488-19479507 | Msa1183950:three_prime_UTR | 30.0% | |
| AATTCTTTGATCGGAAAATG+GGG | - | chr8_1:19479490-19479509 | Msa1183950:three_prime_UTR | 30.0% | |
| GTTATTGAGTATAAGTAACG+TGG | - | chr8_1:19479689-19479708 | Msa1183950:intron | 30.0% | |
| ACTAATCAAAGCATACAGAA+TGG | + | chr8_1:19479763-19479782 | None:intergenic | 30.0% | |
| TTCTGTATGCTTTGATTAGT+TGG | - | chr8_1:19479763-19479782 | Msa1183950:CDS | 30.0% | |
| AAATAAACTCATGAGTAACG+AGG | + | chr8_1:19480010-19480029 | None:intergenic | 30.0% | |
| CTGGTTTAAATCTGTTATGT+AGG | - | chr8_1:19480090-19480109 | Msa1183950:intron | 30.0% | |
| GAAAGAAAAAAAACAACGGA+AGG | + | chr8_1:19480259-19480278 | None:intergenic | 30.0% | |
| AATTCTTATGGAAATGCTAC+GGG | - | chr8_1:19480346-19480365 | Msa1183950:intron | 30.0% | |
| ATTCCATATCAACATAGTGT+GGG | - | chr8_1:19480524-19480543 | Msa1183950:intron | 30.0% | |
| GTAATTGCTCAAAATTTGGA+AGG | - | chr8_1:19480955-19480974 | Msa1183950:intron | 30.0% | |
| ! | ATGTGTTGATGAACATGTTA+AGG | - | chr8_1:19481040-19481059 | Msa1183950:intron | 30.0% |
| ! | TGTGTTGATGAACATGTTAA+GGG | - | chr8_1:19481041-19481060 | Msa1183950:intron | 30.0% |
| CATGTTAAAGCAAGAAAAGA+AGG | + | chr8_1:19481100-19481119 | None:intergenic | 30.0% | |
| GTTGTTGAGAAATAATAACC+TGG | - | chr8_1:19481236-19481255 | Msa1183950:intron | 30.0% | |
| GAACAAATTGATTGCTAAGA+GGG | + | chr8_1:19481277-19481296 | None:intergenic | 30.0% | |
| TGAACAAATTGATTGCTAAG+AGG | + | chr8_1:19481278-19481297 | None:intergenic | 30.0% | |
| ! | TCTTAGCAATCAATTTGTTC+AGG | - | chr8_1:19481277-19481296 | Msa1183950:intron | 30.0% |
| TAGAAGAAGCAACAAAACAT+GGG | + | chr8_1:19481332-19481351 | None:intergenic | 30.0% | |
| TTAGAAGAAGCAACAAAACA+TGG | + | chr8_1:19481333-19481352 | None:intergenic | 30.0% | |
| TTTAACAATGAAAACTGGGA+TGG | + | chr8_1:19481408-19481427 | None:intergenic | 30.0% | |
| AAATGAAGAATCTGGCATTT+CGG | - | chr8_1:19481425-19481444 | Msa1183950:intron | 30.0% | |
| TTGGAACAGAGATCATAAAT+TGG | - | chr8_1:19481533-19481552 | Msa1183950:CDS | 30.0% | |
| TGGAACAGAGATCATAAATT+GGG | - | chr8_1:19481534-19481553 | Msa1183950:CDS | 30.0% | |
| TGTTTAGCAGCTCTATATAA+CGG | + | chr8_1:19481582-19481601 | None:intergenic | 30.0% | |
| TGCTAAACATGCATTTATGA+CGG | - | chr8_1:19481593-19481612 | Msa1183950:intron | 30.0% | |
| GCGTTTAAACAATACAAGAT+GGG | - | chr8_1:19481615-19481634 | Msa1183950:intron | 30.0% | |
| ! | TCAAAAGTATGCTTTCAAGA+TGG | + | chr8_1:19481695-19481714 | None:intergenic | 30.0% |
| TTGTAGTCAACATCATAAGT+TGG | - | chr8_1:19481819-19481838 | Msa1183950:intron | 30.0% | |
| ! | GAGCCTTTATCTTTTTATCT+TGG | + | chr8_1:19481882-19481901 | None:intergenic | 30.0% |
| ! | AGATTTTCCTGATAACTGTA+GGG | + | chr8_1:19481925-19481944 | None:intergenic | 30.0% |
| ! | AAGATTTTCCTGATAACTGT+AGG | + | chr8_1:19481926-19481945 | None:intergenic | 30.0% |
| ! | ACAACCAGCATAATTGTTTT+GGG | + | chr8_1:19481959-19481978 | None:intergenic | 30.0% |
| CATAACGACTCTAATTATAC+AGG | + | chr8_1:19482106-19482125 | None:intergenic | 30.0% | |
| GATAACAATTGAACGAGTTT+AGG | + | chr8_1:19482194-19482213 | None:intergenic | 30.0% | |
| ! | AATGATTATGTCTTTTCCTG+TGG | - | chr8_1:19482311-19482330 | Msa1183950:intron | 30.0% |
| !! | CATTAGTGTGATTTGTTTGT+AGG | - | chr8_1:19482404-19482423 | Msa1183950:intron | 30.0% |
| ! | TTTAATGCTGATTGATCCTA+AGG | - | chr8_1:19482866-19482885 | Msa1183950:intron | 30.0% |
| ! | AGTACTCTTCTGGAAAATAT+CGG | + | chr8_1:19482901-19482920 | None:intergenic | 30.0% |
| GAACATATATAGTACTCTTC+TGG | + | chr8_1:19482911-19482930 | None:intergenic | 30.0% | |
| ! | CGCATACAAGTATTTTATCT+AGG | - | chr8_1:19483015-19483034 | Msa1183950:intron | 30.0% |
| ! | AAGTATTTTATCTAGGCGAT+GGG | - | chr8_1:19483022-19483041 | Msa1183950:intron | 30.0% |
| CTAATGCTCATTTAGTTGAT+TGG | - | chr8_1:19483175-19483194 | Msa1183950:intron | 30.0% | |
| GTAACAATTATCCTTTGCTT+GGG | + | chr8_1:19483209-19483228 | None:intergenic | 30.0% | |
| AGTAACAATTATCCTTTGCT+TGG | + | chr8_1:19483210-19483229 | None:intergenic | 30.0% | |
| !!! | ACAGAACATGTCTTGTTTTT+TGG | + | chr8_1:19483374-19483393 | None:intergenic | 30.0% |
| ! | AATACTTCACCTTTTTGTCA+TGG | - | chr8_1:19483414-19483433 | Msa1183950:intron | 30.0% |
| GGGTAAAAACGATGAAAAAT+GGG | + | chr8_1:19483487-19483506 | None:intergenic | 30.0% | |
| ACTACAGTACATAATCGTTT+AGG | + | chr8_1:19483716-19483735 | None:intergenic | 30.0% | |
| GATGAGGTTAATATGACAAT+TGG | + | chr8_1:19483827-19483846 | None:intergenic | 30.0% | |
| !! | ATGCCTATAGTTGATAGAAT+GGG | - | chr8_1:19483923-19483942 | Msa1183950:intron | 30.0% |
| AAACCCATTCTATCAACTAT+AGG | + | chr8_1:19483929-19483948 | None:intergenic | 30.0% | |
| !!! | TTCACATATTTTGGTGAAAG+GGG | + | chr8_1:19483992-19484011 | None:intergenic | 30.0% |
| AAACTATAACCATCAGTATC+AGG | + | chr8_1:19484466-19484485 | None:intergenic | 30.0% | |
| AAGATAAAATTGGAGCAAGA+AGG | - | chr8_1:19485026-19485045 | Msa1183950:intron | 30.0% | |
| TTTGTAGCAACTCATTAGTT+TGG | + | chr8_1:19485102-19485121 | None:intergenic | 30.0% | |
| AGAACCCATCAATATATACT+TGG | - | chr8_1:19485142-19485161 | Msa1183950:intron | 30.0% | |
| ! | TATTGATAAAGCGTTATGTC+GGG | - | chr8_1:19485524-19485543 | Msa1183950:intron | 30.0% |
| TAGTAAGCTTAAGTCTTACA+TGG | - | chr8_1:19485610-19485629 | Msa1183950:intron | 30.0% | |
| ATGAAATTGTTGTATGTGAC+CGG | - | chr8_1:19485716-19485735 | Msa1183950:intron | 30.0% | |
| GAAAACTTCTGTATAACTCT+AGG | - | chr8_1:19485784-19485803 | Msa1183950:CDS | 30.0% | |
| AAGGGATCAAAGTTAACTTT+GGG | + | chr8_1:19485815-19485834 | None:intergenic | 30.0% | |
| AAAGGGATCAAAGTTAACTT+TGG | + | chr8_1:19485816-19485835 | None:intergenic | 30.0% | |
| CATCTATAACCAAGGTAAAA+AGG | + | chr8_1:19485834-19485853 | None:intergenic | 30.0% | |
| AATAAGCACATCTATAACCA+AGG | + | chr8_1:19485842-19485861 | None:intergenic | 30.0% | |
| GTGCTTATTGAACAAATACA+TGG | - | chr8_1:19485853-19485872 | Msa1183950:five_prime_UTR | 30.0% | |
| AAAATTATTTATCCAGCACG+TGG | + | chr8_1:19486206-19486225 | None:intergenic | 30.0% | |
| ! | TTTCTAACTGATTCTAGTGA+CGG | - | chr8_1:19486223-19486242 | Msa1183950:intron | 30.0% |
| ACATAATTCATTCTGCAGAA+AGG | + | chr8_1:19486296-19486315 | None:intergenic | 30.0% | |
| TATGTAACTAGCAGAATATG+TGG | + | chr8_1:19486374-19486393 | None:intergenic | 30.0% | |
| ATTCTGCTAGTTACATACTT+TGG | - | chr8_1:19486377-19486396 | Msa1183950:intron | 30.0% | |
| TTACATACTTTGGTTGAAAG+TGG | - | chr8_1:19486387-19486406 | Msa1183950:intron | 30.0% | |
| TGTAGATTTGAAGACCTTAT+TGG | - | chr8_1:19486543-19486562 | Msa1183950:intron | 30.0% | |
| CCCAAGTTTCTCTTATAAAT+AGG | - | chr8_1:19486830-19486849 | Msa1183950:intron | 30.0% | |
| GTTTCTCTTATAAATAGGAC+CGG | - | chr8_1:19486835-19486854 | Msa1183950:intron | 30.0% | |
| AAAAACTTATATACTCCCTC+CGG | + | chr8_1:19486857-19486876 | None:intergenic | 30.0% | |
| TGTAAGTTGTAGCACAAAAT+AGG | - | chr8_1:19486966-19486985 | Msa1183950:intron | 30.0% | |
| TTGAACGAACAGTAACACAA+TGG | - | chr8_1:19479048-19479067 | Msa1183950:three_prime_UTR | 35.0% | |
| ! | GAACAGTAACACAATGGTTT+TGG | - | chr8_1:19479054-19479073 | Msa1183950:three_prime_UTR | 35.0% |
| !! | ATGCCAATTCTTGCTTTTGT+AGG | - | chr8_1:19479246-19479265 | Msa1183950:three_prime_UTR | 35.0% |
| AAATGATGATTTGAGCTTCC+GGG | - | chr8_1:19479386-19479405 | Msa1183950:intron | 35.0% | |
| ! | AAAATGGGGTTTGTTTGGAT+TGG | - | chr8_1:19479504-19479523 | Msa1183950:three_prime_UTR | 35.0% |
| TTGAGTTTATCTGCTAGCAT+AGG | - | chr8_1:19479532-19479551 | Msa1183950:three_prime_UTR | 35.0% | |
| TGAGTATAAGTAACGTGGTT+TGG | - | chr8_1:19479694-19479713 | Msa1183950:intron | 35.0% | |
| ATTAGGCTGTTTATCCAAAC+AGG | - | chr8_1:19479851-19479870 | Msa1183950:CDS | 35.0% | |
| TTAGGCTGTTTATCCAAACA+GGG | - | chr8_1:19479852-19479871 | Msa1183950:CDS | 35.0% | |
| GTACATATTACATGAGGGTA+TGG | + | chr8_1:19479924-19479943 | None:intergenic | 35.0% | |
| ATTGTTCTAATAGGATGTGC+TGG | - | chr8_1:19480129-19480148 | Msa1183950:intron | 35.0% | |
| CATTCCATATCAACATAGTG+TGG | - | chr8_1:19480523-19480542 | Msa1183950:intron | 35.0% | |
| TTCCATATCAACATAGTGTG+GGG | - | chr8_1:19480525-19480544 | Msa1183950:intron | 35.0% | |
| GTAATATGTTGCTACACACA+TGG | - | chr8_1:19480585-19480604 | Msa1183950:intron | 35.0% | |
| TACACACATGGTATTCTCTT+AGG | - | chr8_1:19480597-19480616 | Msa1183950:intron | 35.0% | |
| ATATGTTGATCCAACACACT+TGG | + | chr8_1:19480903-19480922 | None:intergenic | 35.0% | |
| ! | CTCTAAGAAGTCTTAAGAGT+AGG | - | chr8_1:19481205-19481224 | Msa1183950:intron | 35.0% |
| ! | CACGTTTTCCCTTATTCTTT+TGG | - | chr8_1:19481354-19481373 | Msa1183950:intron | 35.0% |
| CACTGGATCCAAAAGAATAA+GGG | + | chr8_1:19481365-19481384 | None:intergenic | 35.0% | |
| TCACTGGATCCAAAAGAATA+AGG | + | chr8_1:19481366-19481385 | None:intergenic | 35.0% | |
| GGCGTTTAAACAATACAAGA+TGG | - | chr8_1:19481614-19481633 | Msa1183950:intron | 35.0% | |
| TATGCTTTCAAGATGGTCAT+GGG | + | chr8_1:19481688-19481707 | None:intergenic | 35.0% | |
| ! | AAAGGCTCATAGTTGATTCT+TGG | - | chr8_1:19481894-19481913 | Msa1183950:intron | 35.0% |
| TTCTCCCAAAACAATTATGC+TGG | - | chr8_1:19481952-19481971 | Msa1183950:intron | 35.0% | |
| ! | CACAACCAGCATAATTGTTT+TGG | + | chr8_1:19481960-19481979 | None:intergenic | 35.0% |
| ! | CAAAACAATTATGCTGGTTG+TGG | - | chr8_1:19481958-19481977 | Msa1183950:intron | 35.0% |
| ! | ATGTCATAGGTTTTCTGCTA+GGG | + | chr8_1:19482011-19482030 | None:intergenic | 35.0% |
| TAGCAGAAAACCTATGACAT+GGG | - | chr8_1:19482011-19482030 | Msa1183950:intron | 35.0% | |
| AACAATTGAACGAGTTTAGG+AGG | + | chr8_1:19482191-19482210 | None:intergenic | 35.0% | |
| !! | TCTGGATTAGTTCGTAAAAG+CGG | - | chr8_1:19482278-19482297 | Msa1183950:intron | 35.0% |
| GGCAAGAAAACATACGAAAA+TGG | - | chr8_1:19482555-19482574 | Msa1183950:intron | 35.0% | |
| TTTCTGCAATATGCACAAAC+AGG | + | chr8_1:19482623-19482642 | None:intergenic | 35.0% | |
| ATTAGTGTCTAAGAAGAAGC+AGG | - | chr8_1:19482646-19482665 | Msa1183950:intron | 35.0% | |
| ! | ATATCGGTGTTCAAAACCTT+AGG | + | chr8_1:19482885-19482904 | None:intergenic | 35.0% |
| !! | TTTAGTACCGATTGATCTGA+AGG | - | chr8_1:19482967-19482986 | Msa1183950:intron | 35.0% |
| !!! | GAAGGTTTTGGGACATTAAT+AGG | - | chr8_1:19482985-19483004 | Msa1183950:intron | 35.0% |
| ! | CAAGTATTTTATCTAGGCGA+TGG | - | chr8_1:19483021-19483040 | Msa1183950:intron | 35.0% |
| TCTGAACTGAATTTAGACCT+CGG | + | chr8_1:19483126-19483145 | None:intergenic | 35.0% | |
| ACAAAACGTTATCTCACTGA+AGG | - | chr8_1:19483333-19483352 | Msa1183950:intron | 35.0% | |
| CAAAACGTTATCTCACTGAA+GGG | - | chr8_1:19483334-19483353 | Msa1183950:intron | 35.0% | |
| ACTGAAGGGAAAAAGATAGA+GGG | - | chr8_1:19483348-19483367 | Msa1183950:intron | 35.0% | |
| ! | ACCTTTTTGTCATGGAGATT+AGG | - | chr8_1:19483422-19483441 | Msa1183950:CDS | 35.0% |
| TCCTAATCTCCATGACAAAA+AGG | + | chr8_1:19483426-19483445 | None:intergenic | 35.0% | |
| ! | GTGTTTAGCTCAAAATATGC+TGG | + | chr8_1:19483465-19483484 | None:intergenic | 35.0% |
| GGGGTAAAAACGATGAAAAA+TGG | + | chr8_1:19483488-19483507 | None:intergenic | 35.0% | |
| CAAAGATGAATTATCGTGCT+TGG | - | chr8_1:19483524-19483543 | Msa1183950:intron | 35.0% | |
| CTCATACATGACTAAAGAAC+AGG | - | chr8_1:19483567-19483586 | Msa1183950:intron | 35.0% | |
| GCAAGTATGTATCACAATTC+TGG | - | chr8_1:19483617-19483636 | Msa1183950:intron | 35.0% | |
| ATTTCGTGACTTATTGCTAG+TGG | + | chr8_1:19483671-19483690 | None:intergenic | 35.0% | |
| TTGTGTTCTTGTGTAGTTGT+TGG | - | chr8_1:19483782-19483801 | Msa1183950:intron | 35.0% | |
| ! | TGTTGGTTAACCTTAGTTGT+TGG | - | chr8_1:19483799-19483818 | Msa1183950:intron | 35.0% |
| !! | CATGCCTATAGTTGATAGAA+TGG | - | chr8_1:19483922-19483941 | Msa1183950:intron | 35.0% |
| TTCATCCAAAATCTCTGTTG+AGG | - | chr8_1:19484042-19484061 | Msa1183950:intron | 35.0% | |
| ! | TTTGACCTCAACAGAGATTT+TGG | + | chr8_1:19484050-19484069 | None:intergenic | 35.0% |
| AGTTGAAGAAATCCAGAAGT+TGG | - | chr8_1:19484370-19484389 | Msa1183950:intron | 35.0% | |
| GTTGAAGAAATCCAGAAGTT+GGG | - | chr8_1:19484371-19484390 | Msa1183950:intron | 35.0% | |
| TTGTTTGAACCTGATACTGA+TGG | - | chr8_1:19484454-19484473 | Msa1183950:CDS | 35.0% | |
| GTTACTGCAGAAAATTATGG+AGG | - | chr8_1:19484590-19484609 | Msa1183950:CDS | 35.0% | |
| TTATATTGTCCAAGCAGTGA+AGG | - | chr8_1:19484656-19484675 | Msa1183950:CDS | 35.0% | |
| CTATTATTACCTTCACTGCT+TGG | + | chr8_1:19484668-19484687 | None:intergenic | 35.0% | |
| ATCAAAGGTCCTTCAATCTT+AGG | + | chr8_1:19484760-19484779 | None:intergenic | 35.0% | |
| !! | ATTGTGCTGAATTTTCTAGC+AGG | + | chr8_1:19484864-19484883 | None:intergenic | 35.0% |
| CCAGCCAAGTATATATTGAT+GGG | + | chr8_1:19485149-19485168 | None:intergenic | 35.0% | |
| TCCAGCCAAGTATATATTGA+TGG | + | chr8_1:19485150-19485169 | None:intergenic | 35.0% | |
| ACTAGTAAAGCTATACAAGG+TGG | + | chr8_1:19485434-19485453 | None:intergenic | 35.0% | |
| ! | TGTGACAGTTATGATTTGTC+AGG | - | chr8_1:19485480-19485499 | Msa1183950:intron | 35.0% |
| AGCTTAAGTCTTACATGGAT+CGG | - | chr8_1:19485615-19485634 | Msa1183950:intron | 35.0% | |
| AGGGATCAAAGTTAACTTTG+GGG | + | chr8_1:19485814-19485833 | None:intergenic | 35.0% | |
| ! | ACTTTGATCCCTTTTTACCT+TGG | - | chr8_1:19485822-19485841 | Msa1183950:exon | 35.0% |
| ATGCATATCTAGGAAACACA+CGG | - | chr8_1:19485948-19485967 | Msa1183950:intron | 35.0% | |
| !! | ATGTAAATGTGGCTTTGGTA+GGG | + | chr8_1:19486077-19486096 | None:intergenic | 35.0% |
| !! | AATGTAAATGTGGCTTTGGT+AGG | + | chr8_1:19486078-19486097 | None:intergenic | 35.0% |
| !! | TTCGTTTTAAACAGGCTCTA+TGG | - | chr8_1:19486161-19486180 | Msa1183950:intron | 35.0% |
| !! | ACTTTTGCTGATGACGATTA+TGG | - | chr8_1:19486331-19486350 | Msa1183950:intron | 35.0% |
| !! | CTTTTGCTGATGACGATTAT+GGG | - | chr8_1:19486332-19486351 | Msa1183950:intron | 35.0% |
| !! | TTTTGCTGATGACGATTATG+GGG | - | chr8_1:19486333-19486352 | Msa1183950:intron | 35.0% |
| GTCTCAAAATGGAAAGTCTA+GGG | + | chr8_1:19486429-19486448 | None:intergenic | 35.0% | |
| AGTCTCAAAATGGAAAGTCT+AGG | + | chr8_1:19486430-19486449 | None:intergenic | 35.0% | |
| CTAGATAAGCAGTCTCAAAA+TGG | + | chr8_1:19486440-19486459 | None:intergenic | 35.0% | |
| CTACATCTCTTATCTTCTCA+AGG | + | chr8_1:19486528-19486547 | None:intergenic | 35.0% | |
| TATTTGCACAAATCACTCGT+CGG | + | chr8_1:19486937-19486956 | None:intergenic | 35.0% | |
| ! | GTGCTTTTCACACATAACAT+TGG | + | chr8_1:19487040-19487059 | None:intergenic | 35.0% |
| !! | TAGTCATACAAGGTACTGTC+AGG | + | chr8_1:19479434-19479453 | None:intergenic | 40.0% |
| TGACAGTACCTTGTATGACT+AGG | - | chr8_1:19479433-19479452 | Msa1183950:intron | 40.0% | |
| ! | ATCGGAAAATGGGGTTTGTT+TGG | - | chr8_1:19479499-19479518 | Msa1183950:three_prime_UTR | 40.0% |
| TAGGCAATTGTGAGGATGTT+TGG | - | chr8_1:19479551-19479570 | Msa1183950:exon | 40.0% | |
| !! | AATGTTGACTCACTTCCACA+TGG | - | chr8_1:19479971-19479990 | Msa1183950:CDS | 40.0% |
| GGTAAGTACATATCTCCATG+TGG | + | chr8_1:19479989-19480008 | None:intergenic | 40.0% | |
| GAGTCTGATGCTCTAATGTA+AGG | - | chr8_1:19480397-19480416 | Msa1183950:intron | 40.0% | |
| ! | TTTGTGGGTTTTGCGACATT+TGG | - | chr8_1:19480477-19480496 | Msa1183950:intron | 40.0% |
| GCTCCGTTTAAGAGTTTCAA+GGG | - | chr8_1:19480619-19480638 | Msa1183950:CDS | 40.0% | |
| CTCCGTTTAAGAGTTTCAAG+GGG | - | chr8_1:19480620-19480639 | Msa1183950:CDS | 40.0% | |
| TCCGTTTAAGAGTTTCAAGG+GGG | - | chr8_1:19480621-19480640 | Msa1183950:CDS | 40.0% | |
| TCCCCCTTGAAACTCTTAAA+CGG | + | chr8_1:19480625-19480644 | None:intergenic | 40.0% | |
| TCTGTTTGTGAGTCTAGAAG+GGG | + | chr8_1:19480809-19480828 | None:intergenic | 40.0% | |
| CTCTGTTTGTGAGTCTAGAA+GGG | + | chr8_1:19480810-19480829 | None:intergenic | 40.0% | |
| !! | CGTTTTGAGCAAATGTGCTA+AGG | - | chr8_1:19480991-19481010 | Msa1183950:intron | 40.0% |
| ! | CTGTTTGCTGATTGATGTAC+GGG | + | chr8_1:19481468-19481487 | None:intergenic | 40.0% |
| ! | CCTGTTTGCTGATTGATGTA+CGG | + | chr8_1:19481469-19481488 | None:intergenic | 40.0% |
| CGTACATCAATCAGCAAACA+GGG | - | chr8_1:19481467-19481486 | Msa1183950:intron | 40.0% | |
| GTATGCTTTCAAGATGGTCA+TGG | + | chr8_1:19481689-19481708 | None:intergenic | 40.0% | |
| TTATGACTGCTTGGAATTGC+AGG | - | chr8_1:19481751-19481770 | Msa1183950:CDS | 40.0% | |
| TTTCCTGATAACTGTAGGGA+TGG | + | chr8_1:19481921-19481940 | None:intergenic | 40.0% | |
| ! | CATGTCATAGGTTTTCTGCT+AGG | + | chr8_1:19482012-19482031 | None:intergenic | 40.0% |
| CTAGCAGAAAACCTATGACA+TGG | - | chr8_1:19482010-19482029 | Msa1183950:intron | 40.0% | |
| ACACAAGAAACCCATGTCAT+AGG | + | chr8_1:19482024-19482043 | None:intergenic | 40.0% | |
| !!! | AATCACAGTTTTGACTCCAC+AGG | + | chr8_1:19482330-19482349 | None:intergenic | 40.0% |
| !! | CTCCAAGCTTGTTCACTTTT+GGG | + | chr8_1:19482725-19482744 | None:intergenic | 40.0% |
| !! | ACTCCAAGCTTGTTCACTTT+TGG | + | chr8_1:19482726-19482745 | None:intergenic | 40.0% |
| TATGTAGCAGTTTCCCCTTA+TGG | - | chr8_1:19482757-19482776 | Msa1183950:intron | 40.0% | |
| ! | TTTGTGATGGGAAGCCATAA+GGG | + | chr8_1:19482774-19482793 | None:intergenic | 40.0% |
| !! | TTTTGTGATGGGAAGCCATA+AGG | + | chr8_1:19482775-19482794 | None:intergenic | 40.0% |
| TTATGGCTTCCCATCACAAA+AGG | - | chr8_1:19482774-19482793 | Msa1183950:intron | 40.0% | |
| ! | ACCGATTGATCTGAAGGTTT+TGG | - | chr8_1:19482973-19482992 | Msa1183950:intron | 40.0% |
| CCCAAAACCTTCAGATCAAT+CGG | + | chr8_1:19482977-19482996 | None:intergenic | 40.0% | |
| ! | CCGATTGATCTGAAGGTTTT+GGG | - | chr8_1:19482974-19482993 | Msa1183950:intron | 40.0% |
| ! | TGGTTTTCTTACCCAAGCAA+AGG | - | chr8_1:19483195-19483214 | Msa1183950:intron | 40.0% |
| CACTGAAGGGAAAAAGATAG+AGG | - | chr8_1:19483347-19483366 | Msa1183950:intron | 40.0% | |
| ! | TGTATGAGATTAGCCAGCAA+CGG | + | chr8_1:19483555-19483574 | None:intergenic | 40.0% |
| ! | ACAATTGGCTCCAACAACTA+AGG | + | chr8_1:19483812-19483831 | None:intergenic | 40.0% |
| ATATATTCCCGTTCCCTGTT+TGG | - | chr8_1:19483875-19483894 | Msa1183950:intron | 40.0% | |
| TCAAAGGACCTTACCAAACA+GGG | + | chr8_1:19483891-19483910 | None:intergenic | 40.0% | |
| TTCAAAGGACCTTACCAAAC+AGG | + | chr8_1:19483892-19483911 | None:intergenic | 40.0% | |
| !!! | TATTTTGGTGAAAGGGGAAG+TGG | + | chr8_1:19483986-19484005 | None:intergenic | 40.0% |
| TCAGTCCAACACAATGTTGT+CGG | + | chr8_1:19484089-19484108 | None:intergenic | 40.0% | |
| TAGCGTACATCATATTGCAG+CGG | - | chr8_1:19484568-19484587 | Msa1183950:CDS | 40.0% | |
| GCGGTTACTGCAGAAAATTA+TGG | - | chr8_1:19484587-19484606 | Msa1183950:CDS | 40.0% | |
| CAGATTCTTCCGCATTACTT+CGG | + | chr8_1:19484617-19484636 | None:intergenic | 40.0% | |
| ! | TCTGAAGTGCCTAAGATTGA+AGG | - | chr8_1:19484748-19484767 | Msa1183950:CDS | 40.0% |
| CCCATCAATATATACTTGGC+TGG | - | chr8_1:19485146-19485165 | Msa1183950:intron | 40.0% | |
| AGCAGTAATTCAGCCTCATA+GGG | + | chr8_1:19485186-19485205 | None:intergenic | 40.0% | |
| TAGCAGTAATTCAGCCTCAT+AGG | + | chr8_1:19485187-19485206 | None:intergenic | 40.0% | |
| AAGTGCGATAAGTAGTGCAT+TGG | + | chr8_1:19485325-19485344 | None:intergenic | 40.0% | |
| TCCTTCACAGGAACTTTGAA+AGG | - | chr8_1:19485357-19485376 | Msa1183950:intron | 40.0% | |
| ! | CCTTCACAGGAACTTTGAAA+GGG | - | chr8_1:19485358-19485377 | Msa1183950:intron | 40.0% |
| ! | TGAACAAATACATGGTGCCA+TGG | - | chr8_1:19485861-19485880 | Msa1183950:intron | 40.0% |
| !! | TGGCTTTGGTAGGGTTATTA+TGG | + | chr8_1:19486068-19486087 | None:intergenic | 40.0% |
| GCTAGCATGTTTCATGACTT+TGG | - | chr8_1:19486268-19486287 | Msa1183950:intron | 40.0% | |
| AGTTCATTTCCAAGAGGCTT+GGG | + | chr8_1:19486505-19486524 | None:intergenic | 40.0% | |
| TCAAGGAGTTCATTTCCAAG+AGG | + | chr8_1:19486511-19486530 | None:intergenic | 40.0% | |
| AGGGCATGACTTATCCAATA+AGG | + | chr8_1:19486560-19486579 | None:intergenic | 40.0% | |
| AGTTCCCATATCTCAAGTCA+AGG | - | chr8_1:19486631-19486650 | Msa1183950:intron | 40.0% | |
| ! | TGCTCCTTGACTTGAGATAT+GGG | + | chr8_1:19486638-19486657 | None:intergenic | 40.0% |
| TTGATATCTTGTACTCCCTC+CGG | - | chr8_1:19486724-19486743 | Msa1183950:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | + | chr8_1:19486839-19486858 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | + | chr8_1:19486838-19486857 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr8_1:19486838-19486857 | Msa1183950:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | chr8_1:19486839-19486858 | Msa1183950:intron | 40.0% | |
| GTGTTGCCCAAAAATTTGCA+AGG | + | chr8_1:19486880-19486899 | None:intergenic | 40.0% | |
| TGCTAGCATAGGCAATTGTG+AGG | - | chr8_1:19479543-19479562 | Msa1183950:exon | 45.0% | |
| AAGCCAACTCCTTCACACTA+AGG | + | chr8_1:19479878-19479897 | None:intergenic | 45.0% | |
| GACCCCACACTATGTTGATA+TGG | + | chr8_1:19480530-19480549 | None:intergenic | 45.0% | |
| GGCTCCGTTTAAGAGTTTCA+AGG | - | chr8_1:19480618-19480637 | Msa1183950:CDS | 45.0% | |
| TTTGTGAGTCTAGAAGGGGA+GGG | + | chr8_1:19480805-19480824 | None:intergenic | 45.0% | |
| GCTCTGTTTGTGAGTCTAGA+AGG | + | chr8_1:19480811-19480830 | None:intergenic | 45.0% | |
| GTTAGAAAGGCCAAGTGTGT+TGG | - | chr8_1:19480890-19480909 | Msa1183950:intron | 45.0% | |
| AGCAAGAAAAGAAGGCCACA+TGG | + | chr8_1:19481092-19481111 | None:intergenic | 45.0% | |
| !! | GGGTGTTATTCTAACAGTCC+AGG | + | chr8_1:19481257-19481276 | None:intergenic | 45.0% |
| ! | TTTTGGATCCAGTGATGAGC+TGG | - | chr8_1:19481371-19481390 | Msa1183950:intron | 45.0% |
| TTTGGATCCAGTGATGAGCT+GGG | - | chr8_1:19481372-19481391 | Msa1183950:intron | 45.0% | |
| AATAAACCCCAGCTCATCAC+TGG | + | chr8_1:19481382-19481401 | None:intergenic | 45.0% | |
| CCGTACATCAATCAGCAAAC+AGG | - | chr8_1:19481466-19481485 | Msa1183950:intron | 45.0% | |
| AGATGGTCATGGGATACTGA+AGG | + | chr8_1:19481678-19481697 | None:intergenic | 45.0% | |
| !!! | GCATACTTTTGAGACACAGC+AGG | - | chr8_1:19481703-19481722 | Msa1183950:intron | 45.0% |
| GCTGTGACTTTATGACTGCT+TGG | - | chr8_1:19481742-19481761 | Msa1183950:CDS | 45.0% | |
| TCTGCTAGGGAGGTTAACTA+CGG | + | chr8_1:19481998-19482017 | None:intergenic | 45.0% | |
| ! | TCATAGGTTTTCTGCTAGGG+AGG | + | chr8_1:19482008-19482027 | None:intergenic | 45.0% |
| ATTGAGGTACGGAAAGAGCT+AGG | + | chr8_1:19482231-19482250 | None:intergenic | 45.0% | |
| CACCCAAAAGTGAACAAGCT+TGG | - | chr8_1:19482720-19482739 | Msa1183950:intron | 45.0% | |
| GTGAACAAGCTTGGAGTCAT+AGG | - | chr8_1:19482729-19482748 | Msa1183950:intron | 45.0% | |
| ! | TTGTGATGGGAAGCCATAAG+GGG | + | chr8_1:19482773-19482792 | None:intergenic | 45.0% |
| GCTTGTGGAAAAAATAGCCG+AGG | - | chr8_1:19483106-19483125 | Msa1183950:CDS | 45.0% | |
| !! | CCAAAAATGGGCTACTGATG+AGG | + | chr8_1:19483843-19483862 | None:intergenic | 45.0% |
| ! | CCTCATCAGTAGCCCATTTT+TGG | - | chr8_1:19483840-19483859 | Msa1183950:intron | 45.0% |
| GCATGCGCATACTCATTCAA+AGG | + | chr8_1:19483907-19483926 | None:intergenic | 45.0% | |
| TATGCCCGACAACATTGTGT+TGG | - | chr8_1:19484081-19484100 | Msa1183950:intron | 45.0% | |
| CAGTCCAACACAATGTTGTC+GGG | + | chr8_1:19484088-19484107 | None:intergenic | 45.0% | |
| AACATTGTGTTGGACTGACC+TGG | - | chr8_1:19484091-19484110 | Msa1183950:intron | 45.0% | |
| ACATTGTGTTGGACTGACCT+GGG | - | chr8_1:19484092-19484111 | Msa1183950:intron | 45.0% | |
| CGAAAGTTACTGGTCAGGTA+CGG | + | chr8_1:19484123-19484142 | None:intergenic | 45.0% | |
| CGTACCTGACCAGTAACTTT+CGG | - | chr8_1:19484121-19484140 | Msa1183950:intron | 45.0% | |
| TTTGGCTGACCGAAAGTTAC+TGG | + | chr8_1:19484133-19484152 | None:intergenic | 45.0% | |
| TATGGAGGACCGAAGTAATG+CGG | - | chr8_1:19484605-19484624 | Msa1183950:CDS | 45.0% | |
| GCGGAAGAATCTGCATCTTA+TGG | - | chr8_1:19484624-19484643 | Msa1183950:CDS | 45.0% | |
| !! | GTGCTGAATTTTCTAGCAGG+AGG | + | chr8_1:19484861-19484880 | None:intergenic | 45.0% |
| TGAGGCTGAATTACTGCTAC+TGG | - | chr8_1:19485188-19485207 | Msa1183950:intron | 45.0% | |
| CTTGATCGTTGGAGTATGTG+TGG | - | chr8_1:19485267-19485286 | Msa1183950:intron | 45.0% | |
| ATCGTTGGAGTATGTGTGGA+AGG | - | chr8_1:19485271-19485290 | Msa1183950:intron | 45.0% | |
| TGGAGTATGTGTGGAAGGTT+TGG | - | chr8_1:19485276-19485295 | Msa1183950:intron | 45.0% | |
| GTATCACACGTTTCCTTCAC+AGG | - | chr8_1:19485345-19485364 | Msa1183950:intron | 45.0% | |
| CCCTTTCAAAGTTCCTGTGA+AGG | + | chr8_1:19485361-19485380 | None:intergenic | 45.0% | |
| TTTGTCAGGACGAACTCGAT+TGG | - | chr8_1:19485494-19485513 | Msa1183950:intron | 45.0% | |
| TAAGTCTTACATGGATCGGC+TGG | - | chr8_1:19485619-19485638 | Msa1183950:intron | 45.0% | |
| !! | ACAAATACATGGTGCCATGG+TGG | - | chr8_1:19485864-19485883 | Msa1183950:intron | 45.0% |
| !! | TCTGCAAAAAGCATCCACCA+TGG | + | chr8_1:19485881-19485900 | None:intergenic | 45.0% |
| CACACGGTTTCTGCCTAATT+AGG | - | chr8_1:19485964-19485983 | Msa1183950:intron | 45.0% | |
| AAACGCACAAACAACAGCGT+AGG | - | chr8_1:19486023-19486042 | Msa1183950:intron | 45.0% | |
| ! | AAACATGCTAGCTTCCTCCT+TGG | + | chr8_1:19486260-19486279 | None:intergenic | 45.0% |
| ATCGTCATCAGCAAAAGTCG+AGG | + | chr8_1:19486329-19486348 | None:intergenic | 45.0% | |
| ! | CAGAATATGTGGCTTGTGCT+TGG | + | chr8_1:19486363-19486382 | None:intergenic | 45.0% |
| GAGTTCATTTCCAAGAGGCT+TGG | + | chr8_1:19486506-19486525 | None:intergenic | 45.0% | |
| ! | CTGCTCCTTGACTTGAGATA+TGG | + | chr8_1:19486639-19486658 | None:intergenic | 45.0% |
| CATATCTCAAGTCAAGGAGC+AGG | - | chr8_1:19486637-19486656 | Msa1183950:intron | 45.0% | |
| AAGTCAAGGAGCAGGAGTTT+CGG | - | chr8_1:19486645-19486664 | Msa1183950:intron | 45.0% | |
| !! | AAATTTCTTAATAAAAAATT+GGG | + | chr8_1:19480460-19480479 | None:intergenic | 5.0% |
| !!! | TTTATTTGTAAAATTATTTT+GGG | + | chr8_1:19486902-19486921 | None:intergenic | 5.0% |
| TTTGAGCTTCCGGGTCAACT+CGG | - | chr8_1:19479395-19479414 | Msa1183950:intron | 50.0% | |
| ! | TCATCAAGACCGAGTTGACC+CGG | + | chr8_1:19479407-19479426 | None:intergenic | 50.0% |
| CTTCACACTAAGGCCCTGTT+TGG | + | chr8_1:19479868-19479887 | None:intergenic | 50.0% | |
| CAAACAGGGCCTTAGTGTGA+AGG | - | chr8_1:19479866-19479885 | Msa1183950:CDS | 50.0% | |
| TTCAAGGGGGAGAGAATGAG+AGG | - | chr8_1:19480634-19480653 | Msa1183950:CDS | 50.0% | |
| TCAAGGGGGAGAGAATGAGA+GGG | - | chr8_1:19480635-19480654 | Msa1183950:CDS | 50.0% | |
| GGAGAGAATGAGAGGGCTTT+GGG | - | chr8_1:19480642-19480661 | Msa1183950:CDS | 50.0% | |
| TTGTGAGTCTAGAAGGGGAG+GGG | + | chr8_1:19480804-19480823 | None:intergenic | 50.0% | |
| GTTTGTGAGTCTAGAAGGGG+AGG | + | chr8_1:19480806-19480825 | None:intergenic | 50.0% | |
| TTGGATCCAGTGATGAGCTG+GGG | - | chr8_1:19481373-19481392 | Msa1183950:intron | 50.0% | |
| TGGTCATGGGATACTGAAGG+AGG | + | chr8_1:19481675-19481694 | None:intergenic | 50.0% | |
| GGTCCATCCCTACAGTTATC+AGG | - | chr8_1:19481915-19481934 | Msa1183950:intron | 50.0% | |
| CTAGGGAGGTTAACTACGGA+AGG | + | chr8_1:19481994-19482013 | None:intergenic | 50.0% | |
| GGGGAAAGAATCTGAGCTTG+TGG | - | chr8_1:19483091-19483110 | Msa1183950:CDS | 50.0% | |
| TTCCCGTTCCCTGTTTGGTA+AGG | - | chr8_1:19483880-19483899 | Msa1183950:intron | 50.0% | |
| GACCTTACCAAACAGGGAAC+GGG | + | chr8_1:19483885-19483904 | None:intergenic | 50.0% | |
| GGACCTTACCAAACAGGGAA+CGG | + | chr8_1:19483886-19483905 | None:intergenic | 50.0% | |
| GTGAAAGGGGAAGTGGAATG+TGG | + | chr8_1:19483979-19483998 | None:intergenic | 50.0% | |
| CTGACCGAAAGTTACTGGTC+AGG | + | chr8_1:19484128-19484147 | None:intergenic | 50.0% | |
| GCCAAAATCGAGCTAAGCTG+AGG | - | chr8_1:19484147-19484166 | Msa1183950:intron | 50.0% | |
| ! | GCCTCAGCTTAGCTCGATTT+TGG | + | chr8_1:19484151-19484170 | None:intergenic | 50.0% |
| ! | AAAGCGTTATGTCGGGAGAG+AGG | - | chr8_1:19485531-19485550 | Msa1183950:intron | 50.0% |
| AGCTTCCTCCTTGGAATGGT+CGG | + | chr8_1:19486251-19486270 | None:intergenic | 50.0% | |
| ! | TGCTAGCTTCCTCCTTGGAA+TGG | + | chr8_1:19486255-19486274 | None:intergenic | 50.0% |
| CAGCAAAAGTCGAGGTGTGA+AGG | + | chr8_1:19486321-19486340 | None:intergenic | 50.0% | |
| GGGCCTTAGTGTGAAGGAGT+TGG | - | chr8_1:19479872-19479891 | Msa1183950:CDS | 55.0% | |
| TACGGGTCTCTTGCATCAGC+TGG | - | chr8_1:19480363-19480382 | Msa1183950:intron | 55.0% | |
| GGGAGAGAATGAGAGGGCTT+TGG | - | chr8_1:19480641-19480660 | Msa1183950:CDS | 55.0% | |
| !! | GAGAATGAGAGGGCTTTGGG+AGG | - | chr8_1:19480645-19480664 | Msa1183950:CDS | 55.0% |
| !! | AATGAGAGGGCTTTGGGAGG+AGG | - | chr8_1:19480648-19480667 | Msa1183950:intron | 55.0% |
| !! | ATGAGAGGGCTTTGGGAGGA+GGG | - | chr8_1:19480649-19480668 | Msa1183950:intron | 55.0% |
| ! | CTTTGGGAGGAGGGAAGGAA+AGG | - | chr8_1:19480658-19480677 | Msa1183950:intron | 55.0% |
| GTGCTTGGAATCACCGTTGC+TGG | - | chr8_1:19483539-19483558 | Msa1183950:intron | 55.0% | |
| ATGCAGTGCAGCCCAACTTC+TGG | + | chr8_1:19484385-19484404 | None:intergenic | 55.0% | |
| CGTTATGTCGGGAGAGAGGT+AGG | - | chr8_1:19485535-19485554 | Msa1183950:intron | 55.0% | |
| TATGTCGGGAGAGAGGTAGG+TGG | - | chr8_1:19485538-19485557 | Msa1183950:intron | 55.0% | |
| ! | GTCGCTTTCTTTCCACGTGC+TGG | - | chr8_1:19486191-19486210 | Msa1183950:intron | 55.0% |
| ! | TGACGGATCCGACCATTCCA+AGG | - | chr8_1:19486240-19486259 | Msa1183950:intron | 55.0% |
| GGGTCTCTTGCATCAGCTGG+AGG | - | chr8_1:19480366-19480385 | Msa1183950:intron | 60.0% | |
| CGGATCCGACCATTCCAAGG+AGG | - | chr8_1:19486243-19486262 | Msa1183950:intron | 60.0% | |
| CAGCAAGTGCCCAAGCCTCT+TGG | - | chr8_1:19486493-19486512 | Msa1183950:intron | 60.0% | |
| !! | GAGGGCTTTGGGAGGAGGGA+AGG | - | chr8_1:19480653-19480672 | Msa1183950:intron | 65.0% |
| GGTCAGGTACGGAAGAGCCC+AGG | + | chr8_1:19484112-19484131 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 19479029 | 19487139 | 19479029 | ID=Msa1183950;Name=Msa1183950 |
| chr8_1 | mRNA | 19479029 | 19487139 | 19479029 | ID=Msa1183950-mRNA-1;Parent=Msa1183950;Name=Msa1183950-mRNA-1;_AED=0.25;_eAED=0.25;_QI=137|1|1|1|0.81|0.66|12|387|438 |
| chr8_1 | exon | 19479029 | 19479304 | 19479029 | ID=Msa1183950-mRNA-1:exon:7584;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19479442 | 19479672 | 19479442 | ID=Msa1183950-mRNA-1:exon:7583;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19479760 | 19479993 | 19479760 | ID=Msa1183950-mRNA-1:exon:7582;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19480616 | 19480666 | 19480616 | ID=Msa1183950-mRNA-1:exon:7581;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19481491 | 19481580 | 19481491 | ID=Msa1183950-mRNA-1:exon:7580;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19481731 | 19481808 | 19481731 | ID=Msa1183950-mRNA-1:exon:7579;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19482580 | 19482648 | 19482580 | ID=Msa1183950-mRNA-1:exon:7578;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19483041 | 19483131 | 19483041 | ID=Msa1183950-mRNA-1:exon:7577;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19483418 | 19483528 | 19483418 | ID=Msa1183950-mRNA-1:exon:7576;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19484396 | 19484785 | 19484396 | ID=Msa1183950-mRNA-1:exon:7575;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19485755 | 19485873 | 19485755 | ID=Msa1183950-mRNA-1:exon:7574;Parent=Msa1183950-mRNA-1 |
| chr8_1 | exon | 19487039 | 19487139 | 19487039 | ID=Msa1183950-mRNA-1:exon:7573;Parent=Msa1183950-mRNA-1 |
| chr8_1 | five_prime_UTR | 19487039 | 19487139 | 19487039 | ID=Msa1183950-mRNA-1:five_prime_utr;Parent=Msa1183950-mRNA-1 |
| chr8_1 | five_prime_UTR | 19485838 | 19485873 | 19485838 | ID=Msa1183950-mRNA-1:five_prime_utr;Parent=Msa1183950-mRNA-1 |
| chr8_1 | CDS | 19485755 | 19485837 | 19485755 | ID=Msa1183950-mRNA-1:cds;Parent=Msa1183950-mRNA-1 |
| chr8_1 | CDS | 19484396 | 19484785 | 19484396 | ID=Msa1183950-mRNA-1:cds;Parent=Msa1183950-mRNA-1 |
| chr8_1 | CDS | 19483418 | 19483528 | 19483418 | ID=Msa1183950-mRNA-1:cds;Parent=Msa1183950-mRNA-1 |
| chr8_1 | CDS | 19483041 | 19483131 | 19483041 | ID=Msa1183950-mRNA-1:cds;Parent=Msa1183950-mRNA-1 |
| chr8_1 | CDS | 19482580 | 19482648 | 19482580 | ID=Msa1183950-mRNA-1:cds;Parent=Msa1183950-mRNA-1 |
| chr8_1 | CDS | 19481731 | 19481808 | 19481731 | ID=Msa1183950-mRNA-1:cds;Parent=Msa1183950-mRNA-1 |
| chr8_1 | CDS | 19481491 | 19481580 | 19481491 | ID=Msa1183950-mRNA-1:cds;Parent=Msa1183950-mRNA-1 |
| chr8_1 | CDS | 19480616 | 19480666 | 19480616 | ID=Msa1183950-mRNA-1:cds;Parent=Msa1183950-mRNA-1 |
| chr8_1 | CDS | 19479760 | 19479993 | 19479760 | ID=Msa1183950-mRNA-1:cds;Parent=Msa1183950-mRNA-1 |
| chr8_1 | CDS | 19479553 | 19479672 | 19479553 | ID=Msa1183950-mRNA-1:cds;Parent=Msa1183950-mRNA-1 |
| chr8_1 | three_prime_UTR | 19479442 | 19479552 | 19479442 | ID=Msa1183950-mRNA-1:three_prime_utr;Parent=Msa1183950-mRNA-1 |
| chr8_1 | three_prime_UTR | 19479029 | 19479304 | 19479029 | ID=Msa1183950-mRNA-1:three_prime_utr;Parent=Msa1183950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
