Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1405310 | XP_024629162.1 | 89.269 | 438 | 47 | 0 | 1 | 438 | 1 | 438 | 0.0 | 776 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1405310 | sp|A3KPW7|PTAR1_DANRE | 32.900 | 231 | 112 | 7 | 143 | 334 | 93 | 319 | 7.06e-25 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1405310 | A0A072TJX1 | 84.086 | 465 | 47 | 1 | 1 | 438 | 1 | 465 | 0.0 | 763 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1385770 | Msa1405310 | 0.803983 | 2.686388e-49 | -8.615850e-47 |
| Msa1405310 | Msa1409240 | 0.805552 | 1.263110e-49 | -8.615850e-47 |
| Msa1405310 | Msa1419690 | 0.808364 | 3.212421e-50 | -8.615850e-47 |
| Msa1405310 | Msa1434140 | 0.804272 | 2.339696e-49 | -8.615850e-47 |
| Msa1405310 | Msa1440200 | 0.801725 | 7.863124e-49 | -8.615850e-47 |
| Msa1405310 | Msa1453610 | 0.805095 | 1.575104e-49 | -8.615850e-47 |
| Msa0606720 | Msa1405310 | 0.816746 | 4.716336e-52 | -8.615850e-47 |
| Msa0709400 | Msa1405310 | 0.823221 | 1.556295e-53 | -8.615850e-47 |
| Msa0189320 | Msa1405310 | 0.853984 | 1.664934e-61 | -8.615850e-47 |
| Msa1228520 | Msa1405310 | 0.881473 | 2.331852e-70 | -8.615850e-47 |
| Msa0398670 | Msa1405310 | 0.836841 | 7.386482e-57 | -8.615850e-47 |
| Msa0240920 | Msa1405310 | 0.856836 | 2.457111e-62 | -8.615850e-47 |
| Msa0271510 | Msa1405310 | 0.869025 | 4.215933e-66 | -8.615850e-47 |
| Msa0334550 | Msa1405310 | 0.813885 | 2.040698e-51 | -8.615850e-47 |
| Msa1124960 | Msa1405310 | 0.806726 | 7.150601e-50 | -8.615850e-47 |
| Msa1183950 | Msa1405310 | 0.997126 | 2.670024e-237 | -8.615850e-47 |
| Msa0567350 | Msa1405310 | 0.818158 | 2.267791e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1405310 | MtrunA17_Chr8g0335281 | 83.871 | 465 | 48 | 1 | 1 | 438 | 1 | 465 | 0.0 | 760 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1405310 | AT1G10095.1 | 48.655 | 446 | 194 | 7 | 1 | 438 | 1 | 419 | 1.38e-132 | 389 |
| Msa1405310 | AT1G10095.2 | 50.118 | 425 | 177 | 7 | 1 | 416 | 1 | 399 | 4.39e-132 | 387 |
| Msa1405310 | AT1G10095.3 | 51.818 | 330 | 126 | 5 | 1 | 323 | 1 | 304 | 8.80e-106 | 316 |
| Msa1405310 | AT1G10095.4 | 51.672 | 329 | 126 | 5 | 1 | 322 | 1 | 303 | 2.96e-105 | 314 |
Find 96 sgRNAs with CRISPR-Local
Find 467 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATTTCAAAGAGATTT+TGG | 0.053225 | tig0023127:-30998 | Msa1405310:CDS |
| CTTTATTTGTAAAATTATTT+TGG | 0.061723 | tig0023127:+27169 | None:intergenic |
| ACTCCAAGCTTGTTCACTTT+TGG | 0.178561 | tig0023127:+31345 | None:intergenic |
| TGTAGATTTGAAGACCTTAT+TGG | 0.188433 | tig0023127:-27526 | Msa1405310:CDS |
| AAAGTATAGTTTCTCTTGTT+TGG | 0.245840 | tig0023127:+32557 | None:intergenic |
| TTGGAACAGAGATCATAAAT+TGG | 0.250447 | tig0023127:-32535 | Msa1405310:CDS |
| CTGCTCCTTGACTTGAGATA+TGG | 0.265621 | tig0023127:+27433 | None:intergenic |
| CTTCATTTAACAATGAAAAC+TGG | 0.275914 | tig0023127:+32658 | None:intergenic |
| GAACAGTAACACAATGGTTT+TGG | 0.279747 | tig0023127:-35014 | Msa1405310:five_prime_UTR |
| TAGAAATTCAGAATCGAAAT+TGG | 0.280241 | tig0023127:+34984 | None:intergenic |
| AATGAAGAGTCTAATTCTTA+TGG | 0.301067 | tig0023127:-33734 | Msa1405310:CDS |
| AACAAGAGAAACTATACTTT+TGG | 0.306893 | tig0023127:-32554 | Msa1405310:CDS |
| TTCTGAAAGCTGATTCAAAA+AGG | 0.315689 | tig0023127:-34960 | Msa1405310:intron |
| TTATGACTGCTTGGAATTGC+AGG | 0.316298 | tig0023127:-32317 | Msa1405310:intron |
| TGTAAGTTGTAGCACAAAAT+AGG | 0.316702 | tig0023127:-27103 | Msa1405310:three_prime_UTR |
| TGTTTCTTGTTTCATACTAT+AGG | 0.339556 | tig0023127:+26971 | None:intergenic |
| GCGGAAGAATCTGCATCTTA+TGG | 0.356630 | tig0023127:-29444 | Msa1405310:CDS |
| AAATGAAGAATCTGGCATTT+CGG | 0.372365 | tig0023127:-32643 | Msa1405310:CDS |
| ATGCAGTGCAGCCCAACTTC+TGG | 0.379066 | tig0023127:+29686 | None:intergenic |
| GTCGCTTTCTTTCCACGTGC+TGG | 0.380037 | tig0023127:-27878 | Msa1405310:CDS |
| GTGAACAAGCTTGGAGTCAT+AGG | 0.403674 | tig0023127:-31339 | Msa1405310:intron |
| TGGAACAGAGATCATAAATT+GGG | 0.406123 | tig0023127:-32534 | Msa1405310:CDS |
| CCGTACATCAATCAGCAAAC+AGG | 0.410034 | tig0023127:-32602 | Msa1405310:CDS |
| CTATTATTACCTTCACTGCT+TGG | 0.412692 | tig0023127:+29403 | None:intergenic |
| CAGCAAGTGCCCAAGCCTCT+TGG | 0.415655 | tig0023127:-27576 | Msa1405310:CDS |
| AGTTCATTTCCAAGAGGCTT+GGG | 0.418687 | tig0023127:+27567 | None:intergenic |
| GTGCTTGGAATCACCGTTGC+TGG | 0.420371 | tig0023127:-30529 | Msa1405310:CDS |
| TTAAATAGAGAAGATTTCTC+AGG | 0.421703 | tig0023127:+27492 | None:intergenic |
| TCATTGTTAAATGAAGAATC+TGG | 0.425321 | tig0023127:-32651 | Msa1405310:CDS |
| CTGTTTGCTGATTGATGTAC+GGG | 0.432375 | tig0023127:+32603 | None:intergenic |
| GCTAGCATGTTTCATGACTT+TGG | 0.434326 | tig0023127:-27801 | Msa1405310:CDS |
| TAAACAAAGTTCAATGTTGT+CGG | 0.441931 | tig0023127:+32419 | None:intergenic |
| ATTCTGCTAGTTACATACTT+TGG | 0.453158 | tig0023127:-27692 | Msa1405310:CDS |
| TGCTCCTTGACTTGAGATAT+GGG | 0.453784 | tig0023127:+27434 | None:intergenic |
| CAAAGATGAATTATCGTGCT+TGG | 0.454642 | tig0023127:-30544 | Msa1405310:CDS |
| CCTGTTTGCTGATTGATGTA+CGG | 0.455661 | tig0023127:+32602 | None:intergenic |
| CTCATACATGACTAAAGAAC+AGG | 0.456796 | tig0023127:-30501 | Msa1405310:intron |
| AAGTCAAGGAGCAGGAGTTT+CGG | 0.461495 | tig0023127:-27424 | Msa1405310:three_prime_UTR |
| CAGAATATGTGGCTTGTGCT+TGG | 0.464432 | tig0023127:+27709 | None:intergenic |
| AGGGCATGACTTATCCAATA+AGG | 0.468882 | tig0023127:+27512 | None:intergenic |
| AGTTGAAGAAATCCAGAAGT+TGG | 0.470128 | tig0023127:-29698 | Msa1405310:CDS |
| TTTGGATCCAGTGATGAGCT+GGG | 0.471807 | tig0023127:-32696 | Msa1405310:intron |
| GAGTTCATTTCCAAGAGGCT+TGG | 0.484081 | tig0023127:+27566 | None:intergenic |
| CACCCAAAAGTGAACAAGCT+TGG | 0.486777 | tig0023127:-31348 | Msa1405310:CDS |
| GCGGTTACTGCAGAAAATTA+TGG | 0.487418 | tig0023127:-29481 | Msa1405310:CDS |
| TTACATACTTTGGTTGAAAG+TGG | 0.487489 | tig0023127:-27682 | Msa1405310:intron |
| AAACATGCTAGCTTCCTCCT+TGG | 0.501239 | tig0023127:+27812 | None:intergenic |
| AGCTTCCTCCTTGGAATGGT+CGG | 0.501888 | tig0023127:+27821 | None:intergenic |
| TTTGTCAGGACGAACTCGAT+TGG | 0.506946 | tig0023127:-28575 | Msa1405310:intron |
| TAATTCTTATGGAAATGCTA+CGG | 0.511716 | tig0023127:-33723 | Msa1405310:CDS |
| TACGGGTCTCTTGCATCAGC+TGG | 0.514712 | tig0023127:-33705 | Msa1405310:CDS |
| CAGATTCTTCCGCATTACTT+CGG | 0.515451 | tig0023127:+29454 | None:intergenic |
| GTTGAAGAAATCCAGAAGTT+GGG | 0.520728 | tig0023127:-29697 | Msa1405310:CDS |
| GCTGTGACTTTATGACTGCT+TGG | 0.521973 | tig0023127:-32326 | Msa1405310:CDS |
| TTTAACAATGAAAACTGGGA+TGG | 0.522744 | tig0023127:+32663 | None:intergenic |
| TATTGATAAAGCGTTATGTC+GGG | 0.530806 | tig0023127:-28545 | Msa1405310:CDS |
| AATTCTTATGGAAATGCTAC+GGG | 0.531467 | tig0023127:-33722 | Msa1405310:CDS |
| TAAATAGAGAAGATTTCTCA+GGG | 0.532114 | tig0023127:+27493 | None:intergenic |
| TTTCTAACTGATTCTAGTGA+CGG | 0.533549 | tig0023127:-27846 | Msa1405310:CDS |
| TTCATTTAACAATGAAAACT+GGG | 0.534643 | tig0023127:+32659 | None:intergenic |
| CAAAATAATAAACAATACAT+AGG | 0.536084 | tig0023127:+27365 | None:intergenic |
| TATGTAACTAGCAGAATATG+TGG | 0.536777 | tig0023127:+27698 | None:intergenic |
| GGCGTTTAAACAATACAAGA+TGG | 0.537525 | tig0023127:-32454 | Msa1405310:CDS |
| ATTAGTGTCTAAGAAGAAGC+AGG | 0.548077 | tig0023127:-31422 | Msa1405310:CDS |
| CTACATCTCTTATCTTCTCA+AGG | 0.549991 | tig0023127:+27544 | None:intergenic |
| TGTTTAGCAGCTCTATATAA+CGG | 0.552466 | tig0023127:+32489 | None:intergenic |
| CATATCTCAAGTCAAGGAGC+AGG | 0.555571 | tig0023127:-27432 | Msa1405310:three_prime_UTR |
| GGGGAAAGAATCTGAGCTTG+TGG | 0.560130 | tig0023127:-30977 | Msa1405310:CDS |
| TGCTAGCTTCCTCCTTGGAA+TGG | 0.562432 | tig0023127:+27817 | None:intergenic |
| CAGCAAAAGTCGAGGTGTGA+AGG | 0.567112 | tig0023127:+27751 | None:intergenic |
| GTATGCTTTCAAGATGGTCA+TGG | 0.570789 | tig0023127:+32382 | None:intergenic |
| ATATTGATAAAGCGTTATGT+CGG | 0.571042 | tig0023127:-28546 | Msa1405310:CDS |
| GCTATACATCAATAATGTAT+CGG | 0.584070 | tig0023127:+26993 | None:intergenic |
| TATGCTTTCAAGATGGTCAT+GGG | 0.585632 | tig0023127:+32383 | None:intergenic |
| ACATAATTCATTCTGCAGAA+AGG | 0.585680 | tig0023127:+27776 | None:intergenic |
| TCAAAAGTATGCTTTCAAGA+TGG | 0.587892 | tig0023127:+32376 | None:intergenic |
| TTGGATCCAGTGATGAGCTG+GGG | 0.598597 | tig0023127:-32695 | Msa1405310:intron |
| GCGTTTAAACAATACAAGAT+GGG | 0.601607 | tig0023127:-32453 | Msa1405310:CDS |
| AAAATTATTTATCCAGCACG+TGG | 0.606857 | tig0023127:+27866 | None:intergenic |
| TATTTGCACAAATCACTCGT+CGG | 0.606960 | tig0023127:+27135 | None:intergenic |
| TGCTAAACATGCATTTATGA+CGG | 0.607063 | tig0023127:-32475 | Msa1405310:CDS |
| AGTTCCCATATCTCAAGTCA+AGG | 0.608361 | tig0023127:-27438 | Msa1405310:three_prime_UTR |
| TGACGGATCCGACCATTCCA+AGG | 0.613951 | tig0023127:-27829 | Msa1405310:CDS |
| CGTACATCAATCAGCAAACA+GGG | 0.623280 | tig0023127:-32601 | Msa1405310:CDS |
| GGGTCTCTTGCATCAGCTGG+AGG | 0.626069 | tig0023127:-33702 | Msa1405310:CDS |
| AGATGGTCATGGGATACTGA+AGG | 0.627744 | tig0023127:+32393 | None:intergenic |
| AAAGCGTTATGTCGGGAGAG+AGG | 0.643432 | tig0023127:-28538 | Msa1405310:intron |
| TCAAGGAGTTCATTTCCAAG+AGG | 0.647521 | tig0023127:+27561 | None:intergenic |
| TGTATGAGATTAGCCAGCAA+CGG | 0.659532 | tig0023127:+30516 | None:intergenic |
| TTATATTGTCCAAGCAGTGA+AGG | 0.660492 | tig0023127:-29412 | Msa1405310:intron |
| TATGGAGGACCGAAGTAATG+CGG | 0.664604 | tig0023127:-29463 | Msa1405310:CDS |
| ATCGTCATCAGCAAAAGTCG+AGG | 0.675500 | tig0023127:+27743 | None:intergenic |
| TGGTCATGGGATACTGAAGG+AGG | 0.684375 | tig0023127:+32396 | None:intergenic |
| GTTACTGCAGAAAATTATGG+AGG | 0.691465 | tig0023127:-29478 | Msa1405310:CDS |
| TTGAACGAACAGTAACACAA+TGG | 0.693167 | tig0023127:-35020 | Msa1405310:five_prime_UTR |
| CGGATCCGACCATTCCAAGG+AGG | 0.730357 | tig0023127:-27826 | Msa1405310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCTTAATAAAAAATTG+GGG | + | tig0023127:28382-28401 | None:intergenic | 10.0% |
| !! | CAAATTTCTTAATAAAAAAT+TGG | + | tig0023127:28384-28403 | None:intergenic | 10.0% |
| !!! | ATTTTTTATTAAGAAATTTG+TGG | - | tig0023127:28384-28403 | Msa1405310:intron | 10.0% |
| !!! | TTTTTTATTAAGAAATTTGT+GGG | - | tig0023127:28385-28404 | Msa1405310:intron | 10.0% |
| !!! | TGATTAATATATTTTTAAGA+TGG | - | tig0023127:28672-28691 | Msa1405310:intron | 10.0% |
| !! | ATATTTATTAAACGAAAAAT+TGG | + | tig0023127:29096-29115 | None:intergenic | 10.0% |
| !! | AAAACATAATATAAAGTTTA+AGG | + | tig0023127:30407-30426 | None:intergenic | 10.0% |
| !!! | TTAATATTTTTAATACAACA+TGG | + | tig0023127:31229-31248 | None:intergenic | 10.0% |
| !!! | AAAAATATATTTGAGTTTTT+CGG | + | tig0023127:32104-32123 | None:intergenic | 10.0% |
| !! | AACTAATAATAAACATAAAA+TGG | + | tig0023127:33486-33505 | None:intergenic | 10.0% |
| !!! | CTTTATTTGTAAAATTATTT+TGG | + | tig0023127:34825-34844 | None:intergenic | 10.0% |
| !!! | TTTTTATGTAATTCTTTGAT+CGG | - | tig0023127:27404-27423 | Msa1405310:three_prime_UTR | 15.0% |
| !! | ATGTAATATGTACATATTAT+AGG | - | tig0023127:27854-27873 | Msa1405310:CDS | 15.0% |
| !! | TGTAATATGTACATATTATA+GGG | - | tig0023127:27855-27874 | Msa1405310:CDS | 15.0% |
| !! | AAAAGAAAGAAAAAAAACAA+CGG | + | tig0023127:28186-28205 | None:intergenic | 15.0% |
| !!! | ATATATTTTTAAGATGGAAA+TGG | - | tig0023127:28678-28697 | Msa1405310:intron | 15.0% |
| !! | CTAAAGAAAAATATATGTAA+TGG | + | tig0023127:28940-28959 | None:intergenic | 15.0% |
| !! | AGAAAATATAAAAAGATAAG+AGG | + | tig0023127:29704-29723 | None:intergenic | 15.0% |
| !! | AATTTGACAATAGAAAATTA+GGG | + | tig0023127:30767-30786 | None:intergenic | 15.0% |
| !! | AAATTTGACAATAGAAAATT+AGG | + | tig0023127:30768-30787 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCTTTAACATCTT+TGG | - | tig0023127:31188-31207 | Msa1405310:intron | 15.0% |
| !! | TTTCAATAAAAAGTTAAACA+TGG | - | tig0023127:31870-31889 | Msa1405310:intron | 15.0% |
| !!! | AACTATTTTTTCACATATTT+TGG | + | tig0023127:31924-31943 | None:intergenic | 15.0% |
| !! | AAAAATTGATTGAAATTGAA+AGG | - | tig0023127:32924-32943 | Msa1405310:intron | 15.0% |
| !!! | GAATGAAGATATTATTTTAA+TGG | + | tig0023127:33569-33588 | None:intergenic | 15.0% |
| !!! | TTTATATTTTATTGAAACAC+CGG | + | tig0023127:33660-33679 | None:intergenic | 15.0% |
| !! | CAAAATAATAAACAATACAT+AGG | + | tig0023127:34629-34648 | None:intergenic | 15.0% |
| !!! | AATTTTACAAATAAAGATTC+AGG | - | tig0023127:34829-34848 | Msa1405310:intron | 15.0% |
| !! | TAAAAAAAGAACTTGTAGAT+AGG | - | tig0023127:27730-27749 | Msa1405310:CDS | 20.0% |
| !! | AATATGTACATATTACATGA+GGG | + | tig0023127:27852-27871 | None:intergenic | 20.0% |
| !! | TAATATGTACATATTACATG+AGG | + | tig0023127:27853-27872 | None:intergenic | 20.0% |
| !!! | TAAAATTTTCCTGAAAATTC+TGG | - | tig0023127:27994-28013 | Msa1405310:intron | 20.0% |
| !!! | GATTCTTTTATTGTTCTAAT+AGG | - | tig0023127:28043-28062 | Msa1405310:intron | 20.0% |
| !! | AAGGAATCAATTTCTATAAA+GGG | + | tig0023127:28163-28182 | None:intergenic | 20.0% |
| !! | TTCATTTAACAATGAAAACT+GGG | + | tig0023127:29335-29354 | None:intergenic | 20.0% |
| !!! | AATCCAGAATATCTAAAATA+TGG | + | tig0023127:30189-30208 | None:intergenic | 20.0% |
| !!! | AGCTTATTGTATGATTTTTT+TGG | - | tig0023127:30284-30303 | Msa1405310:intron | 20.0% |
| !!! | TATGATTTTTTTGGCTTTAT+TGG | - | tig0023127:30293-30312 | Msa1405310:intron | 20.0% |
| !!! | TGATTTTATGACTTCATATT+TGG | - | tig0023127:30355-30374 | Msa1405310:intron | 20.0% |
| !!! | AATGACATTCTAGAATTATA+AGG | - | tig0023127:30457-30476 | Msa1405310:intron | 20.0% |
| !!! | AATATTTATCCTTTTGTGAT+GGG | + | tig0023127:30709-30728 | None:intergenic | 20.0% |
| !!! | AAATATTTATCCTTTTGTGA+TGG | + | tig0023127:30710-30729 | None:intergenic | 20.0% |
| !!! | AAAGGATAAATATTTTTCAG+AGG | - | tig0023127:30715-30734 | Msa1405310:intron | 20.0% |
| !!! | TTCAAATTTCAAAGAGATTT+TGG | - | tig0023127:30993-31012 | Msa1405310:CDS | 20.0% |
| !!! | TCAAATTTCAAAGAGATTTT+GGG | - | tig0023127:30994-31013 | Msa1405310:CDS | 20.0% |
| !! | AGAATTGCATACTATTTAAT+TGG | - | tig0023127:31066-31085 | Msa1405310:intron | 20.0% |
| !! | TTACTAGTATATACTAACAT+TGG | - | tig0023127:31148-31167 | Msa1405310:intron | 20.0% |
| !!! | TTTGATCTCTGAAAATTAAA+GGG | + | tig0023127:31431-31450 | None:intergenic | 20.0% |
| !! | ACATTATATCAACCAAAAAT+GGG | + | tig0023127:31778-31797 | None:intergenic | 20.0% |
| !! | TACATTATATCAACCAAAAA+TGG | + | tig0023127:31779-31798 | None:intergenic | 20.0% |
| !! | AACTATAGTGCAAATAAAAA+CGG | - | tig0023127:32140-32159 | Msa1405310:intron | 20.0% |
| !! | TTTGTCAATGATTTGATTAA+TGG | - | tig0023127:32221-32240 | Msa1405310:intron | 20.0% |
| !! | TTGTCAATGATTTGATTAAT+GGG | - | tig0023127:32222-32241 | Msa1405310:intron | 20.0% |
| !! | AATTAAAGATGTGCTTATTT+AGG | - | tig0023127:32261-32280 | Msa1405310:intron | 20.0% |
| !! | ATAAATGAAATAAATGAGCA+AGG | + | tig0023127:32614-32633 | None:intergenic | 20.0% |
| !! | ATATCTTCATTCATTATCTA+TGG | - | tig0023127:33577-33596 | Msa1405310:intron | 20.0% |
| !! | TATCTTCATTCATTATCTAT+GGG | - | tig0023127:33578-33597 | Msa1405310:intron | 20.0% |
| !! | AGAAATTTAAATGCATATCT+AGG | - | tig0023127:33860-33879 | Msa1405310:intron | 20.0% |
| !! | TAGAAAAACATATTGTATTC+GGG | + | tig0023127:34031-34050 | None:intergenic | 20.0% |
| !! | GTAGAAAAACATATTGTATT+CGG | + | tig0023127:34032-34051 | None:intergenic | 20.0% |
| !!! | CCTAATTTTCTCTTATAAAT+AGG | + | tig0023127:34673-34692 | None:intergenic | 20.0% |
| !! | CCTATTTATAAGAGAAAATT+AGG | - | tig0023127:34670-34689 | Msa1405310:intron | 20.0% |
| !! | TCAACAAAAGTTAATGTATT+TGG | - | tig0023127:34693-34712 | Msa1405310:intron | 20.0% |
| ! | TAGAAATTCAGAATCGAAAT+TGG | + | tig0023127:27010-27029 | None:intergenic | 25.0% |
| !!! | TATTTCGTAATGTTTGTTGT+GGG | - | tig0023127:27075-27094 | Msa1405310:three_prime_UTR | 25.0% |
| !! | CATTTTATCAAACAGGTAAT+GGG | + | tig0023127:27152-27171 | None:intergenic | 25.0% |
| ! | TTCAGACAAAAGTGAAAAAT+GGG | + | tig0023127:27223-27242 | None:intergenic | 25.0% |
| ! | ATTCAGACAAAAGTGAAAAA+TGG | + | tig0023127:27224-27243 | None:intergenic | 25.0% |
| ! | TATTGAAACTTATCATGTTG+TGG | - | tig0023127:27280-27299 | Msa1405310:intron | 25.0% |
| !! | ATTATTTTCCTAGTCATACA+AGG | + | tig0023127:27367-27386 | None:intergenic | 25.0% |
| ! | TAATTCTTTGATCGGAAAAT+GGG | - | tig0023127:27412-27431 | Msa1405310:three_prime_UTR | 25.0% |
| ! | GCTTATACATAAATGCTTAT+AGG | - | tig0023127:27581-27600 | Msa1405310:intron | 25.0% |
| !!! | CTACAAGTTCTTTTTTTAGA+AGG | + | tig0023127:27728-27747 | None:intergenic | 25.0% |
| ! | TATGCTATAAACGTTCAATT+AGG | - | tig0023127:27757-27776 | Msa1405310:CDS | 25.0% |
| !! | AGATTTAAACCAGAATTTTC+AGG | + | tig0023127:28006-28025 | None:intergenic | 25.0% |
| ! | GAAGGAATCAATTTCTATAA+AGG | + | tig0023127:28164-28183 | None:intergenic | 25.0% |
| !!! | TTCTTTTTGTTCTTTGAAGT+TGG | - | tig0023127:28199-28218 | Msa1405310:intron | 25.0% |
| !!! | GTTTTTACTGACTATACAAA+AGG | + | tig0023127:28227-28246 | None:intergenic | 25.0% |
| ! | AATGAAGAGTCTAATTCTTA+TGG | - | tig0023127:28257-28276 | Msa1405310:intron | 25.0% |
| ! | TAATTCTTATGGAAATGCTA+CGG | - | tig0023127:28268-28287 | Msa1405310:intron | 25.0% |
| ! | TTCATAAAAGTAGAATGGTA+AGG | + | tig0023127:28756-28775 | None:intergenic | 25.0% |
| !! | CACTTTTCATAAAAGTAGAA+TGG | + | tig0023127:28761-28780 | None:intergenic | 25.0% |
| ! | GTCATTCAAAATTGTTAGAA+AGG | - | tig0023127:28800-28819 | Msa1405310:intron | 25.0% |
| !! | CAAATTTTGAGCAATTACTT+AGG | + | tig0023127:28876-28895 | None:intergenic | 25.0% |
| ! | CTAAGTAATTGCTCAAAATT+TGG | - | tig0023127:28874-28893 | Msa1405310:intron | 25.0% |
| ! | TAATTGCTCAAAATTTGGAA+GGG | - | tig0023127:28879-28898 | Msa1405310:intron | 25.0% |
| !! | ATATTGATTAACATGAACAC+AGG | + | tig0023127:28991-29010 | None:intergenic | 25.0% |
| ! | ATGTTAATCAATATACCATG+TGG | - | tig0023127:28997-29016 | Msa1405310:intron | 25.0% |
| ! | CTTCATTTAACAATGAAAAC+TGG | + | tig0023127:29336-29355 | None:intergenic | 25.0% |
| ! | TCATTGTTAAATGAAGAATC+TGG | - | tig0023127:29340-29359 | Msa1405310:intron | 25.0% |
| ! | AAAGTATAGTTTCTCTTGTT+TGG | + | tig0023127:29437-29456 | None:intergenic | 25.0% |
| !! | AACAAGAGAAACTATACTTT+TGG | - | tig0023127:29437-29456 | Msa1405310:CDS | 25.0% |
| ! | TAAACAAAGTTCAATGTTGT+CGG | + | tig0023127:29575-29594 | None:intergenic | 25.0% |
| !! | ATTGTTTTCAGTTGCTTAAA+AGG | - | tig0023127:29777-29796 | Msa1405310:intron | 25.0% |
| ! | GAACCAAGATAAAAAGATAA+AGG | - | tig0023127:29799-29818 | Msa1405310:intron | 25.0% |
| ! | ATAACGACTCTAATTATACA+GGG | + | tig0023127:30028-30047 | None:intergenic | 25.0% |
| ! | CAAATATACATATTGAGGTA+CGG | + | tig0023127:30165-30184 | None:intergenic | 25.0% |
| ! | ATGGTCAAATATACATATTG+AGG | + | tig0023127:30170-30189 | None:intergenic | 25.0% |
| !!! | TGACCATATTTTAGATATTC+TGG | - | tig0023127:30183-30202 | Msa1405310:intron | 25.0% |
| ! | GTTCAAAATTTGAGCATATA+TGG | + | tig0023127:30745-30764 | None:intergenic | 25.0% |
| !! | CAAATTTCAAAGAGATTTTG+GGG | - | tig0023127:30995-31014 | Msa1405310:CDS | 25.0% |
| !! | TTGATCTCTGAAAATTAAAG+GGG | + | tig0023127:31430-31449 | None:intergenic | 25.0% |
| !! | CTTTGATCTCTGAAAATTAA+AGG | + | tig0023127:31432-31451 | None:intergenic | 25.0% |
| !!! | TTTCACATATTTTGGTGAAA+GGG | + | tig0023127:31916-31935 | None:intergenic | 25.0% |
| !!! | TTTTCACATATTTTGGTGAA+AGG | + | tig0023127:31917-31936 | None:intergenic | 25.0% |
| ! | CAAAGAAATCATATTTCGTA+TGG | + | tig0023127:32205-32224 | None:intergenic | 25.0% |
| ! | TGTCAATGATTTGATTAATG+GGG | - | tig0023127:32223-32242 | Msa1405310:intron | 25.0% |
| ! | TAAAACTAGATAGCAATCAA+AGG | + | tig0023127:32698-32717 | None:intergenic | 25.0% |
| ! | ATGTAAACTACAAACATGAA+AGG | + | tig0023127:32841-32860 | None:intergenic | 25.0% |
| ! | ATTGAAAGGCAAGATAAAAT+TGG | - | tig0023127:32938-32957 | Msa1405310:intron | 25.0% |
| ! | AATAATATAACATCCCTATG+AGG | - | tig0023127:33092-33111 | Msa1405310:intron | 25.0% |
| !! | TAAATTATAGTCTTGATCGT+TGG | - | tig0023127:33178-33197 | Msa1405310:intron | 25.0% |
| ! | TATACTAGTAAAGCTATACA+AGG | + | tig0023127:33359-33378 | None:intergenic | 25.0% |
| !! | ATATTGATAAAGCGTTATGT+CGG | - | tig0023127:33445-33464 | Msa1405310:intron | 25.0% |
| ! | AACAATTTCATGAAAAGTCT+CGG | + | tig0023127:33629-33648 | None:intergenic | 25.0% |
| ! | ATCTATAACCAAGGTAAAAA+GGG | + | tig0023127:33755-33774 | None:intergenic | 25.0% |
| !!! | ACTTTGTTTTACTCCTAATT+AGG | + | tig0023127:33902-33921 | None:intergenic | 25.0% |
| ! | TATAAATGTAAATGTGGCTT+TGG | + | tig0023127:34004-34023 | None:intergenic | 25.0% |
| ! | GGAATCTATAAATGTAAATG+TGG | + | tig0023127:34010-34029 | None:intergenic | 25.0% |
| !!! | CTATAGTAAGTTGTTTTAGA+TGG | - | tig0023127:34051-34070 | Msa1405310:intron | 25.0% |
| !!! | TAATGTTGTTCGTTTTAAAC+AGG | - | tig0023127:34075-34094 | Msa1405310:intron | 25.0% |
| ! | CTTATCTAGATTACTTAATC+AGG | - | tig0023127:34373-34392 | Msa1405310:intron | 25.0% |
| ! | TAAATAGAGAAGATTTCTCA+GGG | + | tig0023127:34501-34520 | None:intergenic | 25.0% |
| ! | TTAAATAGAGAAGATTTCTC+AGG | + | tig0023127:34502-34521 | None:intergenic | 25.0% |
| !! | TTTTCTCTTATAAATAGGAC+CGG | + | tig0023127:34668-34687 | None:intergenic | 25.0% |
| ! | CCTATTTATAAGAGAAACTT+GGG | + | tig0023127:34755-34774 | None:intergenic | 25.0% |
| ! | TCCTATTTATAAGAGAAACT+TGG | + | tig0023127:34756-34775 | None:intergenic | 25.0% |
| !! | AGTTTTTCCTTGCAAATTTT+TGG | - | tig0023127:34792-34811 | Msa1405310:intron | 25.0% |
| !! | GTTTTTCCTTGCAAATTTTT+GGG | - | tig0023127:34793-34812 | Msa1405310:intron | 25.0% |
| ! | GCTATACATCAATAATGTAT+CGG | + | tig0023127:35001-35020 | None:intergenic | 25.0% |
| !! | TGTTTCTTGTTTCATACTAT+AGG | + | tig0023127:35023-35042 | None:intergenic | 25.0% |
| ! | AACAGTAACACAATGGTTTT+GGG | - | tig0023127:26978-26997 | Msa1405310:three_prime_UTR | 30.0% |
| ! | TTCTGAAAGCTGATTCAAAA+AGG | - | tig0023127:27031-27050 | Msa1405310:three_prime_UTR | 30.0% |
| !! | AAAAAGGTATTTGTCTACAC+TGG | - | tig0023127:27047-27066 | Msa1405310:three_prime_UTR | 30.0% |
| ! | CTATTTCGTAATGTTTGTTG+TGG | - | tig0023127:27074-27093 | Msa1405310:three_prime_UTR | 30.0% |
| AACAAAAACTGAACACAGAT+CGG | + | tig0023127:27120-27139 | None:intergenic | 30.0% | |
| ! | GCATTTTATCAAACAGGTAA+TGG | + | tig0023127:27153-27172 | None:intergenic | 30.0% |
| ! | GAATTGGCATTTTATCAAAC+AGG | + | tig0023127:27159-27178 | None:intergenic | 30.0% |
| TATCCTACAAAAGCAAGAAT+TGG | + | tig0023127:27175-27194 | None:intergenic | 30.0% | |
| TTGTAGGATAGTGTAAAGTT+TGG | - | tig0023127:27185-27204 | Msa1405310:three_prime_UTR | 30.0% | |
| TAAATGATGATTTGAGCTTC+CGG | - | tig0023127:27308-27327 | Msa1405310:intron | 30.0% | |
| GTAATTCTTTGATCGGAAAA+TGG | - | tig0023127:27411-27430 | Msa1405310:three_prime_UTR | 30.0% | |
| AATTCTTTGATCGGAAAATG+GGG | - | tig0023127:27413-27432 | Msa1405310:three_prime_UTR | 30.0% | |
| GTTATTGAGTATAAGTAACG+TGG | - | tig0023127:27612-27631 | Msa1405310:intron | 30.0% | |
| ACTAATCAAAGCATACAGAA+TGG | + | tig0023127:27686-27705 | None:intergenic | 30.0% | |
| TTCTGTATGCTTTGATTAGT+TGG | - | tig0023127:27686-27705 | Msa1405310:CDS | 30.0% | |
| AAATAAACTCATGAGTAACG+AGG | + | tig0023127:27933-27952 | None:intergenic | 30.0% | |
| CTGGTTTAAATCTGTTATGT+AGG | - | tig0023127:28013-28032 | Msa1405310:intron | 30.0% | |
| GAAAGAAAAAAAACAACGGA+AGG | + | tig0023127:28182-28201 | None:intergenic | 30.0% | |
| AATTCTTATGGAAATGCTAC+GGG | - | tig0023127:28269-28288 | Msa1405310:intron | 30.0% | |
| ATTCCATATCAACATAGTGT+GGG | - | tig0023127:28447-28466 | Msa1405310:intron | 30.0% | |
| GTAATTGCTCAAAATTTGGA+AGG | - | tig0023127:28878-28897 | Msa1405310:intron | 30.0% | |
| ! | ATGTGTTGATGAACATGTTA+AGG | - | tig0023127:28963-28982 | Msa1405310:intron | 30.0% |
| ! | TGTGTTGATGAACATGTTAA+GGG | - | tig0023127:28964-28983 | Msa1405310:intron | 30.0% |
| CATGTTAAAGCAAGAAAAGA+AGG | + | tig0023127:29023-29042 | None:intergenic | 30.0% | |
| GTTGTTGAGAAATAATAACC+TGG | - | tig0023127:29159-29178 | Msa1405310:intron | 30.0% | |
| GAACAAATTGATTGCTAAGA+GGG | + | tig0023127:29200-29219 | None:intergenic | 30.0% | |
| TGAACAAATTGATTGCTAAG+AGG | + | tig0023127:29201-29220 | None:intergenic | 30.0% | |
| ! | TCTTAGCAATCAATTTGTTC+AGG | - | tig0023127:29200-29219 | Msa1405310:intron | 30.0% |
| TAGAAGAAGCAACAAAACAT+GGG | + | tig0023127:29255-29274 | None:intergenic | 30.0% | |
| TTAGAAGAAGCAACAAAACA+TGG | + | tig0023127:29256-29275 | None:intergenic | 30.0% | |
| TTTAACAATGAAAACTGGGA+TGG | + | tig0023127:29331-29350 | None:intergenic | 30.0% | |
| AAATGAAGAATCTGGCATTT+CGG | - | tig0023127:29348-29367 | Msa1405310:intron | 30.0% | |
| TTGGAACAGAGATCATAAAT+TGG | - | tig0023127:29456-29475 | Msa1405310:CDS | 30.0% | |
| TGGAACAGAGATCATAAATT+GGG | - | tig0023127:29457-29476 | Msa1405310:CDS | 30.0% | |
| TGTTTAGCAGCTCTATATAA+CGG | + | tig0023127:29505-29524 | None:intergenic | 30.0% | |
| TGCTAAACATGCATTTATGA+CGG | - | tig0023127:29516-29535 | Msa1405310:intron | 30.0% | |
| GCGTTTAAACAATACAAGAT+GGG | - | tig0023127:29538-29557 | Msa1405310:intron | 30.0% | |
| ! | TCAAAAGTATGCTTTCAAGA+TGG | + | tig0023127:29618-29637 | None:intergenic | 30.0% |
| TTGTAGTCAACATCATAAGT+TGG | - | tig0023127:29742-29761 | Msa1405310:intron | 30.0% | |
| ! | GAGCCTTTATCTTTTTATCT+TGG | + | tig0023127:29805-29824 | None:intergenic | 30.0% |
| ! | AGATTTTCCTGATAACTGTA+GGG | + | tig0023127:29848-29867 | None:intergenic | 30.0% |
| ! | AAGATTTTCCTGATAACTGT+AGG | + | tig0023127:29849-29868 | None:intergenic | 30.0% |
| ! | ACAACCAGCATAATTGTTTT+GGG | + | tig0023127:29882-29901 | None:intergenic | 30.0% |
| CATAACGACTCTAATTATAC+AGG | + | tig0023127:30029-30048 | None:intergenic | 30.0% | |
| GATAACAATTGAACGAGTTT+AGG | + | tig0023127:30117-30136 | None:intergenic | 30.0% | |
| ! | AATGATTATGTCTTTTCCTG+TGG | - | tig0023127:30234-30253 | Msa1405310:intron | 30.0% |
| !! | CATTAGTGTGATTTGTTTGT+AGG | - | tig0023127:30327-30346 | Msa1405310:intron | 30.0% |
| ! | TTTAATGCTGATTGATCCTA+AGG | - | tig0023127:30789-30808 | Msa1405310:intron | 30.0% |
| ! | AGTACTCTTCTGGAAAATAT+CGG | + | tig0023127:30824-30843 | None:intergenic | 30.0% |
| GAACATATATAGTACTCTTC+TGG | + | tig0023127:30834-30853 | None:intergenic | 30.0% | |
| ! | CGCATACAAGTATTTTATCT+AGG | - | tig0023127:30938-30957 | Msa1405310:intron | 30.0% |
| ! | AAGTATTTTATCTAGGCGAT+GGG | - | tig0023127:30945-30964 | Msa1405310:intron | 30.0% |
| CTAATGCTCATTTAGTTGAT+TGG | - | tig0023127:31098-31117 | Msa1405310:intron | 30.0% | |
| GTAACAATTATCCTTTGCTT+GGG | + | tig0023127:31132-31151 | None:intergenic | 30.0% | |
| AGTAACAATTATCCTTTGCT+TGG | + | tig0023127:31133-31152 | None:intergenic | 30.0% | |
| !!! | ACAGAACATGTCTTGTTTTT+TGG | + | tig0023127:31297-31316 | None:intergenic | 30.0% |
| ! | AATACTTCACCTTTTTGTCA+TGG | - | tig0023127:31337-31356 | Msa1405310:intron | 30.0% |
| GGGTAAAAACGATGAAAAAT+GGG | + | tig0023127:31410-31429 | None:intergenic | 30.0% | |
| ACTACAGTACATAATCGTTT+AGG | + | tig0023127:31639-31658 | None:intergenic | 30.0% | |
| GATGAGGTTAATATGACAAT+TGG | + | tig0023127:31750-31769 | None:intergenic | 30.0% | |
| !! | ATGCCTATAGTTGATAGAAT+GGG | - | tig0023127:31846-31865 | Msa1405310:intron | 30.0% |
| AAACCCATTCTATCAACTAT+AGG | + | tig0023127:31852-31871 | None:intergenic | 30.0% | |
| !!! | TTCACATATTTTGGTGAAAG+GGG | + | tig0023127:31915-31934 | None:intergenic | 30.0% |
| AAACTATAACCATCAGTATC+AGG | + | tig0023127:32389-32408 | None:intergenic | 30.0% | |
| AAGATAAAATTGGAGCAAGA+AGG | - | tig0023127:32948-32967 | Msa1405310:intron | 30.0% | |
| TTTGTAGCAACTCATTAGTT+TGG | + | tig0023127:33024-33043 | None:intergenic | 30.0% | |
| AGAACCCATCAATATATACT+TGG | - | tig0023127:33064-33083 | Msa1405310:intron | 30.0% | |
| ! | TATTGATAAAGCGTTATGTC+GGG | - | tig0023127:33446-33465 | Msa1405310:intron | 30.0% |
| TAGTAAGCTTAAGTCTTACA+TGG | - | tig0023127:33532-33551 | Msa1405310:intron | 30.0% | |
| ATGAAATTGTTGTATGTGAC+CGG | - | tig0023127:33638-33657 | Msa1405310:intron | 30.0% | |
| GAAAACTTCTGTATAACTCT+AGG | - | tig0023127:33706-33725 | Msa1405310:CDS | 30.0% | |
| AAGGGATCAAAGTTAACTTT+GGG | + | tig0023127:33737-33756 | None:intergenic | 30.0% | |
| AAAGGGATCAAAGTTAACTT+TGG | + | tig0023127:33738-33757 | None:intergenic | 30.0% | |
| CATCTATAACCAAGGTAAAA+AGG | + | tig0023127:33756-33775 | None:intergenic | 30.0% | |
| AATAAGCACATCTATAACCA+AGG | + | tig0023127:33764-33783 | None:intergenic | 30.0% | |
| GTGCTTATTGAACAAATACA+TGG | - | tig0023127:33775-33794 | Msa1405310:five_prime_UTR | 30.0% | |
| AAAATTATTTATCCAGCACG+TGG | + | tig0023127:34128-34147 | None:intergenic | 30.0% | |
| ! | TTTCTAACTGATTCTAGTGA+CGG | - | tig0023127:34145-34164 | Msa1405310:intron | 30.0% |
| ACATAATTCATTCTGCAGAA+AGG | + | tig0023127:34218-34237 | None:intergenic | 30.0% | |
| TATGTAACTAGCAGAATATG+TGG | + | tig0023127:34296-34315 | None:intergenic | 30.0% | |
| ATTCTGCTAGTTACATACTT+TGG | - | tig0023127:34299-34318 | Msa1405310:intron | 30.0% | |
| TTACATACTTTGGTTGAAAG+TGG | - | tig0023127:34309-34328 | Msa1405310:intron | 30.0% | |
| TGTAGATTTGAAGACCTTAT+TGG | - | tig0023127:34465-34484 | Msa1405310:intron | 30.0% | |
| CCCAAGTTTCTCTTATAAAT+AGG | - | tig0023127:34752-34771 | Msa1405310:intron | 30.0% | |
| GTTTCTCTTATAAATAGGAC+CGG | - | tig0023127:34757-34776 | Msa1405310:intron | 30.0% | |
| AAAAACTTATATACTCCCTC+CGG | + | tig0023127:34779-34798 | None:intergenic | 30.0% | |
| TGTAAGTTGTAGCACAAAAT+AGG | - | tig0023127:34888-34907 | Msa1405310:intron | 30.0% | |
| TTGAACGAACAGTAACACAA+TGG | - | tig0023127:26971-26990 | Msa1405310:three_prime_UTR | 35.0% | |
| ! | GAACAGTAACACAATGGTTT+TGG | - | tig0023127:26977-26996 | Msa1405310:three_prime_UTR | 35.0% |
| !! | ATGCCAATTCTTGCTTTTGT+AGG | - | tig0023127:27169-27188 | Msa1405310:three_prime_UTR | 35.0% |
| AAATGATGATTTGAGCTTCC+GGG | - | tig0023127:27309-27328 | Msa1405310:intron | 35.0% | |
| ! | AAAATGGGGTTTGTTTGGAT+TGG | - | tig0023127:27427-27446 | Msa1405310:three_prime_UTR | 35.0% |
| TTGAGTTTATCTGCTAGCAT+AGG | - | tig0023127:27455-27474 | Msa1405310:three_prime_UTR | 35.0% | |
| TGAGTATAAGTAACGTGGTT+TGG | - | tig0023127:27617-27636 | Msa1405310:intron | 35.0% | |
| ATTAGGCTGTTTATCCAAAC+AGG | - | tig0023127:27774-27793 | Msa1405310:CDS | 35.0% | |
| TTAGGCTGTTTATCCAAACA+GGG | - | tig0023127:27775-27794 | Msa1405310:CDS | 35.0% | |
| GTACATATTACATGAGGGTA+TGG | + | tig0023127:27847-27866 | None:intergenic | 35.0% | |
| ATTGTTCTAATAGGATGTGC+TGG | - | tig0023127:28052-28071 | Msa1405310:intron | 35.0% | |
| CATTCCATATCAACATAGTG+TGG | - | tig0023127:28446-28465 | Msa1405310:intron | 35.0% | |
| TTCCATATCAACATAGTGTG+GGG | - | tig0023127:28448-28467 | Msa1405310:intron | 35.0% | |
| GTAATATGTTGCTACACACA+TGG | - | tig0023127:28508-28527 | Msa1405310:intron | 35.0% | |
| TACACACATGGTATTCTCTT+AGG | - | tig0023127:28520-28539 | Msa1405310:intron | 35.0% | |
| ATATGTTGATCCAACACACT+TGG | + | tig0023127:28826-28845 | None:intergenic | 35.0% | |
| ! | CTCTAAGAAGTCTTAAGAGT+AGG | - | tig0023127:29128-29147 | Msa1405310:intron | 35.0% |
| ! | CACGTTTTCCCTTATTCTTT+TGG | - | tig0023127:29277-29296 | Msa1405310:intron | 35.0% |
| CACTGGATCCAAAAGAATAA+GGG | + | tig0023127:29288-29307 | None:intergenic | 35.0% | |
| TCACTGGATCCAAAAGAATA+AGG | + | tig0023127:29289-29308 | None:intergenic | 35.0% | |
| GGCGTTTAAACAATACAAGA+TGG | - | tig0023127:29537-29556 | Msa1405310:intron | 35.0% | |
| TATGCTTTCAAGATGGTCAT+GGG | + | tig0023127:29611-29630 | None:intergenic | 35.0% | |
| ! | AAAGGCTCATAGTTGATTCT+TGG | - | tig0023127:29817-29836 | Msa1405310:intron | 35.0% |
| TTCTCCCAAAACAATTATGC+TGG | - | tig0023127:29875-29894 | Msa1405310:intron | 35.0% | |
| ! | CACAACCAGCATAATTGTTT+TGG | + | tig0023127:29883-29902 | None:intergenic | 35.0% |
| ! | CAAAACAATTATGCTGGTTG+TGG | - | tig0023127:29881-29900 | Msa1405310:intron | 35.0% |
| ! | ATGTCATAGGTTTTCTGCTA+GGG | + | tig0023127:29934-29953 | None:intergenic | 35.0% |
| TAGCAGAAAACCTATGACAT+GGG | - | tig0023127:29934-29953 | Msa1405310:intron | 35.0% | |
| AACAATTGAACGAGTTTAGG+AGG | + | tig0023127:30114-30133 | None:intergenic | 35.0% | |
| !! | TCTGGATTAGTTCGTAAAAG+CGG | - | tig0023127:30201-30220 | Msa1405310:intron | 35.0% |
| GGCAAGAAAACATACGAAAA+TGG | - | tig0023127:30478-30497 | Msa1405310:intron | 35.0% | |
| TTTCTGCAATATGCACAAAC+AGG | + | tig0023127:30546-30565 | None:intergenic | 35.0% | |
| ATTAGTGTCTAAGAAGAAGC+AGG | - | tig0023127:30569-30588 | Msa1405310:intron | 35.0% | |
| ! | ATATCGGTGTTCAAAACCTT+AGG | + | tig0023127:30808-30827 | None:intergenic | 35.0% |
| !! | TTTAGTACCGATTGATCTGA+AGG | - | tig0023127:30890-30909 | Msa1405310:intron | 35.0% |
| !!! | GAAGGTTTTGGGACATTAAT+AGG | - | tig0023127:30908-30927 | Msa1405310:intron | 35.0% |
| ! | CAAGTATTTTATCTAGGCGA+TGG | - | tig0023127:30944-30963 | Msa1405310:intron | 35.0% |
| TCTGAACTGAATTTAGACCT+CGG | + | tig0023127:31049-31068 | None:intergenic | 35.0% | |
| ACAAAACGTTATCTCACTGA+AGG | - | tig0023127:31256-31275 | Msa1405310:intron | 35.0% | |
| CAAAACGTTATCTCACTGAA+GGG | - | tig0023127:31257-31276 | Msa1405310:intron | 35.0% | |
| ACTGAAGGGAAAAAGATAGA+GGG | - | tig0023127:31271-31290 | Msa1405310:intron | 35.0% | |
| ! | ACCTTTTTGTCATGGAGATT+AGG | - | tig0023127:31345-31364 | Msa1405310:CDS | 35.0% |
| TCCTAATCTCCATGACAAAA+AGG | + | tig0023127:31349-31368 | None:intergenic | 35.0% | |
| ! | GTGTTTAGCTCAAAATATGC+TGG | + | tig0023127:31388-31407 | None:intergenic | 35.0% |
| GGGGTAAAAACGATGAAAAA+TGG | + | tig0023127:31411-31430 | None:intergenic | 35.0% | |
| CAAAGATGAATTATCGTGCT+TGG | - | tig0023127:31447-31466 | Msa1405310:intron | 35.0% | |
| CTCATACATGACTAAAGAAC+AGG | - | tig0023127:31490-31509 | Msa1405310:intron | 35.0% | |
| GCAAGTATGTATCACAATTC+TGG | - | tig0023127:31540-31559 | Msa1405310:intron | 35.0% | |
| ATTTCGTGACTTATTGCTAG+TGG | + | tig0023127:31594-31613 | None:intergenic | 35.0% | |
| TTGTGTTCTTGTGTAGTTGT+TGG | - | tig0023127:31705-31724 | Msa1405310:intron | 35.0% | |
| ! | TGTTGGTTAACCTTAGTTGT+TGG | - | tig0023127:31722-31741 | Msa1405310:intron | 35.0% |
| !! | CATGCCTATAGTTGATAGAA+TGG | - | tig0023127:31845-31864 | Msa1405310:intron | 35.0% |
| TTCATCCAAAATCTCTGTTG+AGG | - | tig0023127:31965-31984 | Msa1405310:intron | 35.0% | |
| ! | TTTGACCTCAACAGAGATTT+TGG | + | tig0023127:31973-31992 | None:intergenic | 35.0% |
| AGTTGAAGAAATCCAGAAGT+TGG | - | tig0023127:32293-32312 | Msa1405310:intron | 35.0% | |
| GTTGAAGAAATCCAGAAGTT+GGG | - | tig0023127:32294-32313 | Msa1405310:intron | 35.0% | |
| TTGTTTGAACCTGATACTGA+TGG | - | tig0023127:32377-32396 | Msa1405310:CDS | 35.0% | |
| GTTACTGCAGAAAATTATGG+AGG | - | tig0023127:32513-32532 | Msa1405310:CDS | 35.0% | |
| TTATATTGTCCAAGCAGTGA+AGG | - | tig0023127:32579-32598 | Msa1405310:CDS | 35.0% | |
| CTATTATTACCTTCACTGCT+TGG | + | tig0023127:32591-32610 | None:intergenic | 35.0% | |
| ATCAAAGGTCCTTCAATCTT+AGG | + | tig0023127:32683-32702 | None:intergenic | 35.0% | |
| !! | ATTGTGCTGAATTTTCTAGC+AGG | + | tig0023127:32787-32806 | None:intergenic | 35.0% |
| CCAGCCAAGTATATATTGAT+GGG | + | tig0023127:33071-33090 | None:intergenic | 35.0% | |
| TCCAGCCAAGTATATATTGA+TGG | + | tig0023127:33072-33091 | None:intergenic | 35.0% | |
| ACTAGTAAAGCTATACAAGG+TGG | + | tig0023127:33356-33375 | None:intergenic | 35.0% | |
| ! | TGTGACAGTTATGATTTGTC+AGG | - | tig0023127:33402-33421 | Msa1405310:intron | 35.0% |
| AGCTTAAGTCTTACATGGAT+CGG | - | tig0023127:33537-33556 | Msa1405310:intron | 35.0% | |
| AGGGATCAAAGTTAACTTTG+GGG | + | tig0023127:33736-33755 | None:intergenic | 35.0% | |
| ! | ACTTTGATCCCTTTTTACCT+TGG | - | tig0023127:33744-33763 | Msa1405310:exon | 35.0% |
| ATGCATATCTAGGAAACACA+CGG | - | tig0023127:33870-33889 | Msa1405310:intron | 35.0% | |
| !! | ATGTAAATGTGGCTTTGGTA+GGG | + | tig0023127:33999-34018 | None:intergenic | 35.0% |
| !! | AATGTAAATGTGGCTTTGGT+AGG | + | tig0023127:34000-34019 | None:intergenic | 35.0% |
| !! | TTCGTTTTAAACAGGCTCTA+TGG | - | tig0023127:34083-34102 | Msa1405310:intron | 35.0% |
| !! | ACTTTTGCTGATGACGATTA+TGG | - | tig0023127:34253-34272 | Msa1405310:intron | 35.0% |
| !! | CTTTTGCTGATGACGATTAT+GGG | - | tig0023127:34254-34273 | Msa1405310:intron | 35.0% |
| !! | TTTTGCTGATGACGATTATG+GGG | - | tig0023127:34255-34274 | Msa1405310:intron | 35.0% |
| GTCTCAAAATGGAAAGTCTA+GGG | + | tig0023127:34351-34370 | None:intergenic | 35.0% | |
| AGTCTCAAAATGGAAAGTCT+AGG | + | tig0023127:34352-34371 | None:intergenic | 35.0% | |
| CTAGATAAGCAGTCTCAAAA+TGG | + | tig0023127:34362-34381 | None:intergenic | 35.0% | |
| CTACATCTCTTATCTTCTCA+AGG | + | tig0023127:34450-34469 | None:intergenic | 35.0% | |
| TATTTGCACAAATCACTCGT+CGG | + | tig0023127:34859-34878 | None:intergenic | 35.0% | |
| ! | GTGCTTTTCACACATAACAT+TGG | + | tig0023127:34962-34981 | None:intergenic | 35.0% |
| !! | TAGTCATACAAGGTACTGTC+AGG | + | tig0023127:27357-27376 | None:intergenic | 40.0% |
| TGACAGTACCTTGTATGACT+AGG | - | tig0023127:27356-27375 | Msa1405310:intron | 40.0% | |
| ! | ATCGGAAAATGGGGTTTGTT+TGG | - | tig0023127:27422-27441 | Msa1405310:three_prime_UTR | 40.0% |
| TAGGCAATTGTGAGGATGTT+TGG | - | tig0023127:27474-27493 | Msa1405310:exon | 40.0% | |
| !! | AATGTTGACTCACTTCCACA+TGG | - | tig0023127:27894-27913 | Msa1405310:CDS | 40.0% |
| GGTAAGTACATATCTCCATG+TGG | + | tig0023127:27912-27931 | None:intergenic | 40.0% | |
| GAGTCTGATGCTCTAATGTA+AGG | - | tig0023127:28320-28339 | Msa1405310:intron | 40.0% | |
| ! | TTTGTGGGTTTTGCGACATT+TGG | - | tig0023127:28400-28419 | Msa1405310:intron | 40.0% |
| GCTCCGTTTAAGAGTTTCAA+GGG | - | tig0023127:28542-28561 | Msa1405310:CDS | 40.0% | |
| CTCCGTTTAAGAGTTTCAAG+GGG | - | tig0023127:28543-28562 | Msa1405310:CDS | 40.0% | |
| TCCGTTTAAGAGTTTCAAGG+GGG | - | tig0023127:28544-28563 | Msa1405310:CDS | 40.0% | |
| TCCCCCTTGAAACTCTTAAA+CGG | + | tig0023127:28548-28567 | None:intergenic | 40.0% | |
| TCTGTTTGTGAGTCTAGAAG+GGG | + | tig0023127:28732-28751 | None:intergenic | 40.0% | |
| CTCTGTTTGTGAGTCTAGAA+GGG | + | tig0023127:28733-28752 | None:intergenic | 40.0% | |
| !! | CGTTTTGAGCAAATGTGCTA+AGG | - | tig0023127:28914-28933 | Msa1405310:intron | 40.0% |
| ! | CTGTTTGCTGATTGATGTAC+GGG | + | tig0023127:29391-29410 | None:intergenic | 40.0% |
| ! | CCTGTTTGCTGATTGATGTA+CGG | + | tig0023127:29392-29411 | None:intergenic | 40.0% |
| CGTACATCAATCAGCAAACA+GGG | - | tig0023127:29390-29409 | Msa1405310:intron | 40.0% | |
| GTATGCTTTCAAGATGGTCA+TGG | + | tig0023127:29612-29631 | None:intergenic | 40.0% | |
| TTATGACTGCTTGGAATTGC+AGG | - | tig0023127:29674-29693 | Msa1405310:CDS | 40.0% | |
| TTTCCTGATAACTGTAGGGA+TGG | + | tig0023127:29844-29863 | None:intergenic | 40.0% | |
| ! | CATGTCATAGGTTTTCTGCT+AGG | + | tig0023127:29935-29954 | None:intergenic | 40.0% |
| CTAGCAGAAAACCTATGACA+TGG | - | tig0023127:29933-29952 | Msa1405310:intron | 40.0% | |
| ACACAAGAAACCCATGTCAT+AGG | + | tig0023127:29947-29966 | None:intergenic | 40.0% | |
| !!! | AATCACAGTTTTGACTCCAC+AGG | + | tig0023127:30253-30272 | None:intergenic | 40.0% |
| !! | CTCCAAGCTTGTTCACTTTT+GGG | + | tig0023127:30648-30667 | None:intergenic | 40.0% |
| !! | ACTCCAAGCTTGTTCACTTT+TGG | + | tig0023127:30649-30668 | None:intergenic | 40.0% |
| TATGTAGCAGTTTCCCCTTA+TGG | - | tig0023127:30680-30699 | Msa1405310:intron | 40.0% | |
| ! | TTTGTGATGGGAAGCCATAA+GGG | + | tig0023127:30697-30716 | None:intergenic | 40.0% |
| !! | TTTTGTGATGGGAAGCCATA+AGG | + | tig0023127:30698-30717 | None:intergenic | 40.0% |
| TTATGGCTTCCCATCACAAA+AGG | - | tig0023127:30697-30716 | Msa1405310:intron | 40.0% | |
| ! | ACCGATTGATCTGAAGGTTT+TGG | - | tig0023127:30896-30915 | Msa1405310:intron | 40.0% |
| CCCAAAACCTTCAGATCAAT+CGG | + | tig0023127:30900-30919 | None:intergenic | 40.0% | |
| ! | CCGATTGATCTGAAGGTTTT+GGG | - | tig0023127:30897-30916 | Msa1405310:intron | 40.0% |
| ! | TGGTTTTCTTACCCAAGCAA+AGG | - | tig0023127:31118-31137 | Msa1405310:intron | 40.0% |
| CACTGAAGGGAAAAAGATAG+AGG | - | tig0023127:31270-31289 | Msa1405310:intron | 40.0% | |
| ! | TGTATGAGATTAGCCAGCAA+CGG | + | tig0023127:31478-31497 | None:intergenic | 40.0% |
| ! | ACAATTGGCTCCAACAACTA+AGG | + | tig0023127:31735-31754 | None:intergenic | 40.0% |
| ATATATTCCCGTTCCCTGTT+TGG | - | tig0023127:31798-31817 | Msa1405310:intron | 40.0% | |
| TCAAAGGACCTTACCAAACA+GGG | + | tig0023127:31814-31833 | None:intergenic | 40.0% | |
| TTCAAAGGACCTTACCAAAC+AGG | + | tig0023127:31815-31834 | None:intergenic | 40.0% | |
| !!! | TATTTTGGTGAAAGGGGAAG+TGG | + | tig0023127:31909-31928 | None:intergenic | 40.0% |
| TCAGTCCAACACAATGTTGT+CGG | + | tig0023127:32012-32031 | None:intergenic | 40.0% | |
| TAGCGTACATCATATTGCAG+CGG | - | tig0023127:32491-32510 | Msa1405310:CDS | 40.0% | |
| GCGGTTACTGCAGAAAATTA+TGG | - | tig0023127:32510-32529 | Msa1405310:CDS | 40.0% | |
| CAGATTCTTCCGCATTACTT+CGG | + | tig0023127:32540-32559 | None:intergenic | 40.0% | |
| ! | TCTGAAGTGCCTAAGATTGA+AGG | - | tig0023127:32671-32690 | Msa1405310:CDS | 40.0% |
| CCCATCAATATATACTTGGC+TGG | - | tig0023127:33068-33087 | Msa1405310:intron | 40.0% | |
| AGCAGTAATTCAGCCTCATA+GGG | + | tig0023127:33108-33127 | None:intergenic | 40.0% | |
| TAGCAGTAATTCAGCCTCAT+AGG | + | tig0023127:33109-33128 | None:intergenic | 40.0% | |
| AAGTGCGATAAGTAGTGCAT+TGG | + | tig0023127:33247-33266 | None:intergenic | 40.0% | |
| TCCTTCACAGGAACTTTGAA+AGG | - | tig0023127:33279-33298 | Msa1405310:intron | 40.0% | |
| ! | CCTTCACAGGAACTTTGAAA+GGG | - | tig0023127:33280-33299 | Msa1405310:intron | 40.0% |
| ! | TGAACAAATACATGGTGCCA+TGG | - | tig0023127:33783-33802 | Msa1405310:intron | 40.0% |
| !! | TGGCTTTGGTAGGGTTATTA+TGG | + | tig0023127:33990-34009 | None:intergenic | 40.0% |
| GCTAGCATGTTTCATGACTT+TGG | - | tig0023127:34190-34209 | Msa1405310:intron | 40.0% | |
| AGTTCATTTCCAAGAGGCTT+GGG | + | tig0023127:34427-34446 | None:intergenic | 40.0% | |
| TCAAGGAGTTCATTTCCAAG+AGG | + | tig0023127:34433-34452 | None:intergenic | 40.0% | |
| AGGGCATGACTTATCCAATA+AGG | + | tig0023127:34482-34501 | None:intergenic | 40.0% | |
| AGTTCCCATATCTCAAGTCA+AGG | - | tig0023127:34553-34572 | Msa1405310:intron | 40.0% | |
| ! | TGCTCCTTGACTTGAGATAT+GGG | + | tig0023127:34560-34579 | None:intergenic | 40.0% |
| TTGATATCTTGTACTCCCTC+CGG | - | tig0023127:34646-34665 | Msa1405310:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | + | tig0023127:34761-34780 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | + | tig0023127:34760-34779 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | tig0023127:34760-34779 | Msa1405310:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | tig0023127:34761-34780 | Msa1405310:intron | 40.0% | |
| GTGTTGCCCAAAAATTTGCA+AGG | + | tig0023127:34802-34821 | None:intergenic | 40.0% | |
| TGCTAGCATAGGCAATTGTG+AGG | - | tig0023127:27466-27485 | Msa1405310:exon | 45.0% | |
| AAGCCAACTCCTTCACACTA+AGG | + | tig0023127:27801-27820 | None:intergenic | 45.0% | |
| GACCCCACACTATGTTGATA+TGG | + | tig0023127:28453-28472 | None:intergenic | 45.0% | |
| GGCTCCGTTTAAGAGTTTCA+AGG | - | tig0023127:28541-28560 | Msa1405310:CDS | 45.0% | |
| TTTGTGAGTCTAGAAGGGGA+GGG | + | tig0023127:28728-28747 | None:intergenic | 45.0% | |
| GCTCTGTTTGTGAGTCTAGA+AGG | + | tig0023127:28734-28753 | None:intergenic | 45.0% | |
| GTTAGAAAGGCCAAGTGTGT+TGG | - | tig0023127:28813-28832 | Msa1405310:intron | 45.0% | |
| AGCAAGAAAAGAAGGCCACA+TGG | + | tig0023127:29015-29034 | None:intergenic | 45.0% | |
| !! | GGGTGTTATTCTAACAGTCC+AGG | + | tig0023127:29180-29199 | None:intergenic | 45.0% |
| ! | TTTTGGATCCAGTGATGAGC+TGG | - | tig0023127:29294-29313 | Msa1405310:intron | 45.0% |
| TTTGGATCCAGTGATGAGCT+GGG | - | tig0023127:29295-29314 | Msa1405310:intron | 45.0% | |
| AATAAACCCCAGCTCATCAC+TGG | + | tig0023127:29305-29324 | None:intergenic | 45.0% | |
| CCGTACATCAATCAGCAAAC+AGG | - | tig0023127:29389-29408 | Msa1405310:intron | 45.0% | |
| AGATGGTCATGGGATACTGA+AGG | + | tig0023127:29601-29620 | None:intergenic | 45.0% | |
| !!! | GCATACTTTTGAGACACAGC+AGG | - | tig0023127:29626-29645 | Msa1405310:intron | 45.0% |
| GCTGTGACTTTATGACTGCT+TGG | - | tig0023127:29665-29684 | Msa1405310:CDS | 45.0% | |
| TCTGCTAGGGAGGTTAACTA+CGG | + | tig0023127:29921-29940 | None:intergenic | 45.0% | |
| ! | TCATAGGTTTTCTGCTAGGG+AGG | + | tig0023127:29931-29950 | None:intergenic | 45.0% |
| ATTGAGGTACGGAAAGAGCT+AGG | + | tig0023127:30154-30173 | None:intergenic | 45.0% | |
| CACCCAAAAGTGAACAAGCT+TGG | - | tig0023127:30643-30662 | Msa1405310:intron | 45.0% | |
| GTGAACAAGCTTGGAGTCAT+AGG | - | tig0023127:30652-30671 | Msa1405310:intron | 45.0% | |
| ! | TTGTGATGGGAAGCCATAAG+GGG | + | tig0023127:30696-30715 | None:intergenic | 45.0% |
| GCTTGTGGAAAAAATAGCCG+AGG | - | tig0023127:31029-31048 | Msa1405310:CDS | 45.0% | |
| !! | CCAAAAATGGGCTACTGATG+AGG | + | tig0023127:31766-31785 | None:intergenic | 45.0% |
| ! | CCTCATCAGTAGCCCATTTT+TGG | - | tig0023127:31763-31782 | Msa1405310:intron | 45.0% |
| GCATGCGCATACTCATTCAA+AGG | + | tig0023127:31830-31849 | None:intergenic | 45.0% | |
| TATGCCCGACAACATTGTGT+TGG | - | tig0023127:32004-32023 | Msa1405310:intron | 45.0% | |
| CAGTCCAACACAATGTTGTC+GGG | + | tig0023127:32011-32030 | None:intergenic | 45.0% | |
| AACATTGTGTTGGACTGACC+TGG | - | tig0023127:32014-32033 | Msa1405310:intron | 45.0% | |
| ACATTGTGTTGGACTGACCT+GGG | - | tig0023127:32015-32034 | Msa1405310:intron | 45.0% | |
| CGAAAGTTACTGGTCAGGTA+CGG | + | tig0023127:32046-32065 | None:intergenic | 45.0% | |
| CGTACCTGACCAGTAACTTT+CGG | - | tig0023127:32044-32063 | Msa1405310:intron | 45.0% | |
| TTTGGCTGACCGAAAGTTAC+TGG | + | tig0023127:32056-32075 | None:intergenic | 45.0% | |
| TATGGAGGACCGAAGTAATG+CGG | - | tig0023127:32528-32547 | Msa1405310:CDS | 45.0% | |
| GCGGAAGAATCTGCATCTTA+TGG | - | tig0023127:32547-32566 | Msa1405310:CDS | 45.0% | |
| !! | GTGCTGAATTTTCTAGCAGG+AGG | + | tig0023127:32784-32803 | None:intergenic | 45.0% |
| TGAGGCTGAATTACTGCTAC+TGG | - | tig0023127:33110-33129 | Msa1405310:intron | 45.0% | |
| CTTGATCGTTGGAGTATGTG+TGG | - | tig0023127:33189-33208 | Msa1405310:intron | 45.0% | |
| ATCGTTGGAGTATGTGTGGA+AGG | - | tig0023127:33193-33212 | Msa1405310:intron | 45.0% | |
| TGGAGTATGTGTGGAAGGTT+TGG | - | tig0023127:33198-33217 | Msa1405310:intron | 45.0% | |
| GTATCACACGTTTCCTTCAC+AGG | - | tig0023127:33267-33286 | Msa1405310:intron | 45.0% | |
| CCCTTTCAAAGTTCCTGTGA+AGG | + | tig0023127:33283-33302 | None:intergenic | 45.0% | |
| TTTGTCAGGACGAACTCGAT+TGG | - | tig0023127:33416-33435 | Msa1405310:intron | 45.0% | |
| TAAGTCTTACATGGATCGGC+TGG | - | tig0023127:33541-33560 | Msa1405310:intron | 45.0% | |
| !! | ACAAATACATGGTGCCATGG+TGG | - | tig0023127:33786-33805 | Msa1405310:intron | 45.0% |
| !! | TCTGCAAAAAGCATCCACCA+TGG | + | tig0023127:33803-33822 | None:intergenic | 45.0% |
| CACACGGTTTCTGCCTAATT+AGG | - | tig0023127:33886-33905 | Msa1405310:intron | 45.0% | |
| AAACGCACAAACAACAGCGT+AGG | - | tig0023127:33945-33964 | Msa1405310:intron | 45.0% | |
| ! | AAACATGCTAGCTTCCTCCT+TGG | + | tig0023127:34182-34201 | None:intergenic | 45.0% |
| ATCGTCATCAGCAAAAGTCG+AGG | + | tig0023127:34251-34270 | None:intergenic | 45.0% | |
| ! | CAGAATATGTGGCTTGTGCT+TGG | + | tig0023127:34285-34304 | None:intergenic | 45.0% |
| GAGTTCATTTCCAAGAGGCT+TGG | + | tig0023127:34428-34447 | None:intergenic | 45.0% | |
| ! | CTGCTCCTTGACTTGAGATA+TGG | + | tig0023127:34561-34580 | None:intergenic | 45.0% |
| CATATCTCAAGTCAAGGAGC+AGG | - | tig0023127:34559-34578 | Msa1405310:intron | 45.0% | |
| AAGTCAAGGAGCAGGAGTTT+CGG | - | tig0023127:34567-34586 | Msa1405310:intron | 45.0% | |
| !! | AAATTTCTTAATAAAAAATT+GGG | + | tig0023127:28383-28402 | None:intergenic | 5.0% |
| !!! | TTTATTTGTAAAATTATTTT+GGG | + | tig0023127:34824-34843 | None:intergenic | 5.0% |
| TTTGAGCTTCCGGGTCAACT+CGG | - | tig0023127:27318-27337 | Msa1405310:intron | 50.0% | |
| ! | TCATCAAGACCGAGTTGACC+CGG | + | tig0023127:27330-27349 | None:intergenic | 50.0% |
| CTTCACACTAAGGCCCTGTT+TGG | + | tig0023127:27791-27810 | None:intergenic | 50.0% | |
| CAAACAGGGCCTTAGTGTGA+AGG | - | tig0023127:27789-27808 | Msa1405310:CDS | 50.0% | |
| TTCAAGGGGGAGAGAATGAG+AGG | - | tig0023127:28557-28576 | Msa1405310:CDS | 50.0% | |
| TCAAGGGGGAGAGAATGAGA+GGG | - | tig0023127:28558-28577 | Msa1405310:CDS | 50.0% | |
| GGAGAGAATGAGAGGGCTTT+GGG | - | tig0023127:28565-28584 | Msa1405310:CDS | 50.0% | |
| TTGTGAGTCTAGAAGGGGAG+GGG | + | tig0023127:28727-28746 | None:intergenic | 50.0% | |
| GTTTGTGAGTCTAGAAGGGG+AGG | + | tig0023127:28729-28748 | None:intergenic | 50.0% | |
| TTGGATCCAGTGATGAGCTG+GGG | - | tig0023127:29296-29315 | Msa1405310:intron | 50.0% | |
| TGGTCATGGGATACTGAAGG+AGG | + | tig0023127:29598-29617 | None:intergenic | 50.0% | |
| GGTCCATCCCTACAGTTATC+AGG | - | tig0023127:29838-29857 | Msa1405310:intron | 50.0% | |
| CTAGGGAGGTTAACTACGGA+AGG | + | tig0023127:29917-29936 | None:intergenic | 50.0% | |
| GGGGAAAGAATCTGAGCTTG+TGG | - | tig0023127:31014-31033 | Msa1405310:CDS | 50.0% | |
| TTCCCGTTCCCTGTTTGGTA+AGG | - | tig0023127:31803-31822 | Msa1405310:intron | 50.0% | |
| GACCTTACCAAACAGGGAAC+GGG | + | tig0023127:31808-31827 | None:intergenic | 50.0% | |
| GGACCTTACCAAACAGGGAA+CGG | + | tig0023127:31809-31828 | None:intergenic | 50.0% | |
| GTGAAAGGGGAAGTGGAATG+TGG | + | tig0023127:31902-31921 | None:intergenic | 50.0% | |
| CTGACCGAAAGTTACTGGTC+AGG | + | tig0023127:32051-32070 | None:intergenic | 50.0% | |
| GCCAAAATCGAGCTAAGCTG+AGG | - | tig0023127:32070-32089 | Msa1405310:intron | 50.0% | |
| ! | GCCTCAGCTTAGCTCGATTT+TGG | + | tig0023127:32074-32093 | None:intergenic | 50.0% |
| ! | AAAGCGTTATGTCGGGAGAG+AGG | - | tig0023127:33453-33472 | Msa1405310:intron | 50.0% |
| AGCTTCCTCCTTGGAATGGT+CGG | + | tig0023127:34173-34192 | None:intergenic | 50.0% | |
| ! | TGCTAGCTTCCTCCTTGGAA+TGG | + | tig0023127:34177-34196 | None:intergenic | 50.0% |
| CAGCAAAAGTCGAGGTGTGA+AGG | + | tig0023127:34243-34262 | None:intergenic | 50.0% | |
| GGGCCTTAGTGTGAAGGAGT+TGG | - | tig0023127:27795-27814 | Msa1405310:CDS | 55.0% | |
| TACGGGTCTCTTGCATCAGC+TGG | - | tig0023127:28286-28305 | Msa1405310:intron | 55.0% | |
| GGGAGAGAATGAGAGGGCTT+TGG | - | tig0023127:28564-28583 | Msa1405310:CDS | 55.0% | |
| !! | GAGAATGAGAGGGCTTTGGG+AGG | - | tig0023127:28568-28587 | Msa1405310:CDS | 55.0% |
| !! | AATGAGAGGGCTTTGGGAGG+AGG | - | tig0023127:28571-28590 | Msa1405310:intron | 55.0% |
| !! | ATGAGAGGGCTTTGGGAGGA+GGG | - | tig0023127:28572-28591 | Msa1405310:intron | 55.0% |
| ! | CTTTGGGAGGAGGGAAGGAA+AGG | - | tig0023127:28581-28600 | Msa1405310:intron | 55.0% |
| GTGCTTGGAATCACCGTTGC+TGG | - | tig0023127:31462-31481 | Msa1405310:intron | 55.0% | |
| ATGCAGTGCAGCCCAACTTC+TGG | + | tig0023127:32308-32327 | None:intergenic | 55.0% | |
| CGTTATGTCGGGAGAGAGGT+AGG | - | tig0023127:33457-33476 | Msa1405310:intron | 55.0% | |
| TATGTCGGGAGAGAGGTAGG+TGG | - | tig0023127:33460-33479 | Msa1405310:intron | 55.0% | |
| ! | GTCGCTTTCTTTCCACGTGC+TGG | - | tig0023127:34113-34132 | Msa1405310:intron | 55.0% |
| ! | TGACGGATCCGACCATTCCA+AGG | - | tig0023127:34162-34181 | Msa1405310:intron | 55.0% |
| GGGTCTCTTGCATCAGCTGG+AGG | - | tig0023127:28289-28308 | Msa1405310:intron | 60.0% | |
| CGGATCCGACCATTCCAAGG+AGG | - | tig0023127:34165-34184 | Msa1405310:intron | 60.0% | |
| CAGCAAGTGCCCAAGCCTCT+TGG | - | tig0023127:34415-34434 | Msa1405310:intron | 60.0% | |
| !! | GAGGGCTTTGGGAGGAGGGA+AGG | - | tig0023127:28576-28595 | Msa1405310:intron | 65.0% |
| GGTCAGGTACGGAAGAGCCC+AGG | + | tig0023127:32035-32054 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023127 | gene | 26952 | 35061 | 26952 | ID=Msa1405310;Name=Msa1405310 |
| tig0023127 | mRNA | 26952 | 35061 | 26952 | ID=Msa1405310-mRNA-1;Parent=Msa1405310;Name=Msa1405310-mRNA-1;_AED=0.25;_eAED=0.25;_QI=137|1|1|1|0.81|0.66|12|387|438 |
| tig0023127 | exon | 26952 | 27227 | 26952 | ID=Msa1405310-mRNA-1:exon:24072;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 27365 | 27595 | 27365 | ID=Msa1405310-mRNA-1:exon:24071;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 27683 | 27916 | 27683 | ID=Msa1405310-mRNA-1:exon:24070;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 28539 | 28589 | 28539 | ID=Msa1405310-mRNA-1:exon:24069;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 29413 | 29502 | 29413 | ID=Msa1405310-mRNA-1:exon:24068;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 29653 | 29730 | 29653 | ID=Msa1405310-mRNA-1:exon:24067;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 30502 | 30570 | 30502 | ID=Msa1405310-mRNA-1:exon:24066;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 30963 | 31053 | 30963 | ID=Msa1405310-mRNA-1:exon:24065;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 31340 | 31450 | 31340 | ID=Msa1405310-mRNA-1:exon:24064;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 32318 | 32707 | 32318 | ID=Msa1405310-mRNA-1:exon:24063;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 33677 | 33795 | 33677 | ID=Msa1405310-mRNA-1:exon:24062;Parent=Msa1405310-mRNA-1 |
| tig0023127 | exon | 34961 | 35061 | 34961 | ID=Msa1405310-mRNA-1:exon:24061;Parent=Msa1405310-mRNA-1 |
| tig0023127 | five_prime_UTR | 34961 | 35061 | 34961 | ID=Msa1405310-mRNA-1:five_prime_utr;Parent=Msa1405310-mRNA-1 |
| tig0023127 | five_prime_UTR | 33760 | 33795 | 33760 | ID=Msa1405310-mRNA-1:five_prime_utr;Parent=Msa1405310-mRNA-1 |
| tig0023127 | CDS | 33677 | 33759 | 33677 | ID=Msa1405310-mRNA-1:cds;Parent=Msa1405310-mRNA-1 |
| tig0023127 | CDS | 32318 | 32707 | 32318 | ID=Msa1405310-mRNA-1:cds;Parent=Msa1405310-mRNA-1 |
| tig0023127 | CDS | 31340 | 31450 | 31340 | ID=Msa1405310-mRNA-1:cds;Parent=Msa1405310-mRNA-1 |
| tig0023127 | CDS | 30963 | 31053 | 30963 | ID=Msa1405310-mRNA-1:cds;Parent=Msa1405310-mRNA-1 |
| tig0023127 | CDS | 30502 | 30570 | 30502 | ID=Msa1405310-mRNA-1:cds;Parent=Msa1405310-mRNA-1 |
| tig0023127 | CDS | 29653 | 29730 | 29653 | ID=Msa1405310-mRNA-1:cds;Parent=Msa1405310-mRNA-1 |
| tig0023127 | CDS | 29413 | 29502 | 29413 | ID=Msa1405310-mRNA-1:cds;Parent=Msa1405310-mRNA-1 |
| tig0023127 | CDS | 28539 | 28589 | 28539 | ID=Msa1405310-mRNA-1:cds;Parent=Msa1405310-mRNA-1 |
| tig0023127 | CDS | 27683 | 27916 | 27683 | ID=Msa1405310-mRNA-1:cds;Parent=Msa1405310-mRNA-1 |
| tig0023127 | CDS | 27476 | 27595 | 27476 | ID=Msa1405310-mRNA-1:cds;Parent=Msa1405310-mRNA-1 |
| tig0023127 | three_prime_UTR | 27365 | 27475 | 27365 | ID=Msa1405310-mRNA-1:three_prime_utr;Parent=Msa1405310-mRNA-1 |
| tig0023127 | three_prime_UTR | 26952 | 27227 | 26952 | ID=Msa1405310-mRNA-1:three_prime_utr;Parent=Msa1405310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
