Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240920 | CAI29267.1 | 98.352 | 182 | 3 | 0 | 1 | 182 | 1 | 182 | 5.06e-127 | 364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240920 | sp|Q940S5|COPZ1_ARATH | 75.706 | 177 | 43 | 0 | 6 | 182 | 1 | 177 | 2.34e-96 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240920 | Q5QQ31 | 98.352 | 182 | 3 | 0 | 1 | 182 | 1 | 182 | 2.42e-127 | 364 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033260 | Msa0240920 | 0.801931 | 7.132381e-49 | -8.615850e-47 |
| Msa0044000 | Msa0240920 | 0.803184 | 3.934753e-49 | -8.615850e-47 |
| Msa0044330 | Msa0240920 | 0.804945 | 1.692870e-49 | -8.615850e-47 |
| Msa0072420 | Msa0240920 | 0.857565 | 1.496569e-62 | -8.615850e-47 |
| Msa0079070 | Msa0240920 | 0.828554 | 8.430004e-55 | -8.615850e-47 |
| Msa0081780 | Msa0240920 | 0.821750 | 3.420318e-53 | -8.615850e-47 |
| Msa0091410 | Msa0240920 | 0.800228 | 1.589957e-48 | -8.615850e-47 |
| Msa0101500 | Msa0240920 | -0.807533 | 4.824604e-50 | -8.615850e-47 |
| Msa0114060 | Msa0240920 | 0.802092 | 6.608421e-49 | -8.615850e-47 |
| Msa0115790 | Msa0240920 | 0.807229 | 5.598730e-50 | -8.615850e-47 |
| Msa0123560 | Msa0240920 | 0.800929 | 1.144511e-48 | -8.615850e-47 |
| Msa0127650 | Msa0240920 | 0.843058 | 1.769859e-58 | -8.615850e-47 |
| Msa0127800 | Msa0240920 | 0.806315 | 8.731663e-50 | -8.615850e-47 |
| Msa0148080 | Msa0240920 | 0.808895 | 2.473752e-50 | -8.615850e-47 |
| Msa0168310 | Msa0240920 | 0.822761 | 1.992106e-53 | -8.615850e-47 |
| Msa0174090 | Msa0240920 | 0.819094 | 1.391093e-52 | -8.615850e-47 |
| Msa0189320 | Msa0240920 | 0.842467 | 2.540555e-58 | -8.615850e-47 |
| Msa0194950 | Msa0240920 | -0.805367 | 1.381377e-49 | -8.615850e-47 |
| Msa0204960 | Msa0240920 | 0.805599 | 1.235137e-49 | -8.615850e-47 |
| Msa0211150 | Msa0240920 | 0.807858 | 4.115504e-50 | -8.615850e-47 |
| Msa0233630 | Msa0240920 | -0.822677 | 2.084254e-53 | -8.615850e-47 |
| Msa0240920 | Msa0249860 | 0.809264 | 2.062163e-50 | -8.615850e-47 |
| Msa0240920 | Msa0257520 | 0.823408 | 1.407798e-53 | -8.615850e-47 |
| Msa0240920 | Msa0261090 | 0.831387 | 1.717743e-55 | -8.615850e-47 |
| Msa0240920 | Msa0271510 | 0.889004 | 3.569609e-73 | -8.615850e-47 |
| Msa0240920 | Msa0272300 | 0.838925 | 2.151907e-57 | -8.615850e-47 |
| Msa0240920 | Msa0277010 | -0.816222 | 6.179716e-52 | -8.615850e-47 |
| Msa0240920 | Msa0305410 | 0.821022 | 5.035042e-53 | -8.615850e-47 |
| Msa0240920 | Msa0317940 | 0.806192 | 9.268672e-50 | -8.615850e-47 |
| Msa0240920 | Msa0318680 | 0.831756 | 1.393302e-55 | -8.615850e-47 |
| Msa0240920 | Msa0334550 | 0.832186 | 1.091340e-55 | -8.615850e-47 |
| Msa0240920 | Msa0398670 | 0.885331 | 8.913526e-72 | -8.615850e-47 |
| Msa0240920 | Msa0454360 | 0.826039 | 3.376568e-54 | -8.615850e-47 |
| Msa0240920 | Msa0530560 | 0.822219 | 2.663550e-53 | -8.615850e-47 |
| Msa0240920 | Msa0531530 | 0.811852 | 5.690175e-51 | -8.615850e-47 |
| Msa0240920 | Msa0548240 | 0.816333 | 5.836921e-52 | -8.615850e-47 |
| Msa0240920 | Msa0567350 | 0.839510 | 1.517996e-57 | -8.615850e-47 |
| Msa0240920 | Msa0606720 | 0.835831 | 1.334629e-56 | -8.615850e-47 |
| Msa0240920 | Msa0658890 | 0.806309 | 8.756786e-50 | -8.615850e-47 |
| Msa0240920 | Msa0665860 | 0.808055 | 3.737487e-50 | -8.615850e-47 |
| Msa0240920 | Msa0673160 | 0.802929 | 4.443328e-49 | -8.615850e-47 |
| Msa0240920 | Msa0707250 | 0.821306 | 4.331452e-53 | -8.615850e-47 |
| Msa0240920 | Msa0709400 | 0.861041 | 1.354955e-63 | -8.615850e-47 |
| Msa0240920 | Msa0711450 | 0.818647 | 1.757696e-52 | -8.615850e-47 |
| Msa0240920 | Msa0741440 | 0.829136 | 6.095479e-55 | -8.615850e-47 |
| Msa0240920 | Msa0831110 | 0.808615 | 2.838727e-50 | -8.615850e-47 |
| Msa0240920 | Msa0858390 | 0.801066 | 1.073041e-48 | -8.615850e-47 |
| Msa0240920 | Msa0865030 | 0.801450 | 8.952527e-49 | -8.615850e-47 |
| Msa0240920 | Msa0878220 | 0.812036 | 5.188713e-51 | -8.615850e-47 |
| Msa0240920 | Msa0919860 | 0.824090 | 9.742352e-54 | -8.615850e-47 |
| Msa0240920 | Msa0934850 | 0.833957 | 3.956316e-56 | -8.615850e-47 |
| Msa0240920 | Msa1029050 | 0.808046 | 3.754123e-50 | -8.615850e-47 |
| Msa0240920 | Msa1031660 | 0.804163 | 2.464670e-49 | -8.615850e-47 |
| Msa0240920 | Msa1033400 | 0.828745 | 7.577262e-55 | -8.615850e-47 |
| Msa0240920 | Msa1035480 | 0.811821 | 5.780700e-51 | -8.615850e-47 |
| Msa0240920 | Msa1059470 | 0.814836 | 1.257912e-51 | -8.615850e-47 |
| Msa0240920 | Msa1070720 | 0.823420 | 1.398481e-53 | -8.615850e-47 |
| Msa0240920 | Msa1117240 | 0.827841 | 1.252062e-54 | -8.615850e-47 |
| Msa0240920 | Msa1124960 | 0.841307 | 5.144506e-58 | -8.615850e-47 |
| Msa0240920 | Msa1158640 | -0.800463 | 1.424587e-48 | -8.615850e-47 |
| Msa0240920 | Msa1167340 | 0.800327 | 1.518418e-48 | -8.615850e-47 |
| Msa0240920 | Msa1176720 | 0.811191 | 7.920082e-51 | -8.615850e-47 |
| Msa0240920 | Msa1181910 | 0.806662 | 7.378350e-50 | -8.615850e-47 |
| Msa0240920 | Msa1183950 | 0.856357 | 3.397020e-62 | -8.615850e-47 |
| Msa0240920 | Msa1184910 | 0.803609 | 3.212905e-49 | -8.615850e-47 |
| Msa0240920 | Msa1211420 | -0.800938 | 1.139775e-48 | -8.615850e-47 |
| Msa0240920 | Msa1228520 | 0.841185 | 5.538630e-58 | -8.615850e-47 |
| Msa0240920 | Msa1244600 | 0.809778 | 1.599156e-50 | -8.615850e-47 |
| Msa0240920 | Msa1275050 | 0.820678 | 6.040752e-53 | -8.615850e-47 |
| Msa0240920 | Msa1279400 | 0.800801 | 1.215324e-48 | -8.615850e-47 |
| Msa0240920 | Msa1297050 | -0.829181 | 5.943093e-55 | -8.615850e-47 |
| Msa0240920 | Msa1305810 | 0.827172 | 1.811688e-54 | -8.615850e-47 |
| Msa0240920 | Msa1331320 | 0.802876 | 4.556559e-49 | -8.615850e-47 |
| Msa0240920 | Msa1335540 | 0.819600 | 1.066546e-52 | -8.615850e-47 |
| Msa0240920 | Msa1336290 | 0.829681 | 4.492194e-55 | -8.615850e-47 |
| Msa0240920 | Msa1341060 | 0.844118 | 9.214208e-59 | -8.615850e-47 |
| Msa0240920 | Msa1345100 | 0.820814 | 5.621132e-53 | -8.615850e-47 |
| Msa0240920 | Msa1346840 | 0.818373 | 2.027230e-52 | -8.615850e-47 |
| Msa0240920 | Msa1357620 | 0.817642 | 2.966757e-52 | -8.615850e-47 |
| Msa0240920 | Msa1358500 | 0.807076 | 6.030596e-50 | -8.615850e-47 |
| Msa0240920 | Msa1364350 | -0.801893 | 7.261002e-49 | -8.615850e-47 |
| Msa0240920 | Msa1393570 | 0.821120 | 4.779422e-53 | -8.615850e-47 |
| Msa0240920 | Msa1401990 | 0.801100 | 1.055874e-48 | -8.615850e-47 |
| Msa0240920 | Msa1405310 | 0.856836 | 2.457111e-62 | -8.615850e-47 |
| Msa0240920 | Msa1419690 | 0.854199 | 1.443212e-61 | -8.615850e-47 |
| Msa0240920 | Msa1434420 | -0.806977 | 6.330150e-50 | -8.615850e-47 |
| Msa0240920 | Msa1440200 | 0.837775 | 4.258621e-57 | -8.615850e-47 |
| Msa0240920 | Msa1453610 | 0.822073 | 2.878318e-53 | -8.615850e-47 |
| Msa0240920 | Msa1457620 | 0.833996 | 3.868865e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240920 | MtrunA17_Chr2g0291621 | 98.352 | 182 | 3 | 0 | 1 | 182 | 24 | 205 | 6.07e-131 | 365 |
| Msa0240920 | MtrunA17_Chr8g0342591 | 75.862 | 174 | 42 | 0 | 8 | 181 | 6 | 179 | 3.08e-93 | 269 |
| Msa0240920 | MtrunA17_Chr7g0216831 | 71.795 | 156 | 44 | 0 | 12 | 167 | 2 | 157 | 5.87e-81 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240920 | AT1G60970.1 | 75.706 | 177 | 43 | 0 | 6 | 182 | 1 | 177 | 2.38e-97 | 280 |
| Msa0240920 | AT3G09800.1 | 70.166 | 181 | 51 | 1 | 1 | 181 | 1 | 178 | 7.83e-93 | 268 |
| Msa0240920 | AT3G09800.4 | 70.166 | 181 | 51 | 1 | 1 | 181 | 1 | 178 | 7.83e-93 | 268 |
| Msa0240920 | AT3G09800.5 | 70.166 | 181 | 51 | 1 | 1 | 181 | 1 | 178 | 7.83e-93 | 268 |
| Msa0240920 | AT3G09800.6 | 70.166 | 181 | 51 | 1 | 1 | 181 | 81 | 258 | 2.13e-91 | 267 |
| Msa0240920 | AT4G08520.1 | 72.093 | 172 | 48 | 0 | 10 | 181 | 9 | 180 | 3.19e-91 | 264 |
| Msa0240920 | AT3G09800.2 | 71.311 | 122 | 35 | 0 | 60 | 181 | 18 | 139 | 2.38e-61 | 187 |
| Msa0240920 | AT3G09800.3 | 71.311 | 122 | 35 | 0 | 60 | 181 | 18 | 139 | 2.38e-61 | 187 |
Find 49 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTCCCAGCTATAGTATT+TGG | 0.152147 | 2_2:+16360456 | None:intergenic |
| TGTGAAGAACATCCTTCTTT+TGG | 0.230451 | 2_2:-16362237 | Msa0240920:CDS |
| GATCTTCACTTCTTTGTTAC+TGG | 0.233863 | 2_2:-16361913 | Msa0240920:CDS |
| AAAAGCTTCCTTTGCACTAT+TGG | 0.246999 | 2_2:+16362163 | None:intergenic |
| TTATTTCAAATATCAATATC+AGG | 0.284377 | 2_2:+16359899 | None:intergenic |
| GGAAGTAATAGTACAGATTC+TGG | 0.313738 | 2_2:-16360432 | Msa0240920:CDS |
| ATTCAGTTGGCCTCCTGCTC+AGG | 0.331455 | 2_2:-16361837 | Msa0240920:intron |
| TATCATTAATACATGAAGTT+TGG | 0.342832 | 2_2:-16360142 | Msa0240920:intron |
| TGGAGCTCCTTTGTCTGAAC+AGG | 0.379095 | 2_2:-16360412 | Msa0240920:intron |
| GCAATATCATGAAATTTAAC+TGG | 0.392385 | 2_2:+16359955 | None:intergenic |
| TTCATGTAGTTCATTTAAGA+AGG | 0.405897 | 2_2:+16360256 | None:intergenic |
| ACTACTCCAAATACTATAGC+TGG | 0.418010 | 2_2:-16360462 | Msa0240920:CDS |
| GAAGGAAGCACTGGAGAACT+TGG | 0.432743 | 2_2:-16361681 | Msa0240920:CDS |
| ATCGATGAAATTATTGATGC+AGG | 0.435159 | 2_2:-16361641 | Msa0240920:CDS |
| CTAAGTATTTCACAGATGAT+TGG | 0.437609 | 2_2:-16362190 | Msa0240920:CDS |
| TAACAAAGAAGTGAAGATCT+TGG | 0.449077 | 2_2:+16361917 | None:intergenic |
| ATCTTCACTTCTTTGTTACT+GGG | 0.467745 | 2_2:-16361912 | Msa0240920:CDS |
| AGATTCTTAAAACCAAATAT+AGG | 0.467950 | 2_2:+16360090 | None:intergenic |
| TATTTCAAATATCAATATCA+GGG | 0.468055 | 2_2:+16359900 | None:intergenic |
| AGAGAGAGAGATTACGAGCT+TGG | 0.468302 | 2_2:+16363125 | None:intergenic |
| AATACTATAGCTGGGAAAGT+TGG | 0.483190 | 2_2:-16360453 | Msa0240920:CDS |
| TATCTTATCCTCAGTTCTGC+AGG | 0.484498 | 2_2:-16361869 | Msa0240920:CDS |
| AACATCGGTATTCAAGTTTG+AGG | 0.493912 | 2_2:+16360052 | None:intergenic |
| GCTTCCTTTGCACTATTGGT+TGG | 0.497397 | 2_2:+16362167 | None:intergenic |
| TATCAGAAAACAACCTGAGC+AGG | 0.503709 | 2_2:+16361824 | None:intergenic |
| GTCAAGCATTGGCCTCAGCT+AGG | 0.506234 | 2_2:-16360296 | Msa0240920:CDS |
| AGAAGGATGTTCTTCACAGA+AGG | 0.510757 | 2_2:+16362242 | None:intergenic |
| AGAGAGATTACGAGCTTGGA+AGG | 0.514127 | 2_2:+16363129 | None:intergenic |
| GCAGACACTAAGTCAAGCAT+TGG | 0.516098 | 2_2:-16360307 | Msa0240920:intron |
| TCAAGCATTGGCCTCAGCTA+GGG | 0.518417 | 2_2:-16360295 | Msa0240920:CDS |
| CTCACCTTCAGTGCGAGCAT+TGG | 0.533277 | 2_2:+16362109 | None:intergenic |
| TCCCATCAGAATCCAAAAGA+AGG | 0.535691 | 2_2:+16362225 | None:intergenic |
| CAGAGGCAATGTGGACAAGA+AGG | 0.539823 | 2_2:-16361699 | Msa0240920:CDS |
| TGTGGACAAGAAGGAAGCAC+TGG | 0.543071 | 2_2:-16361690 | Msa0240920:CDS |
| AAGACCAATGCTCGCACTGA+AGG | 0.548318 | 2_2:-16362113 | Msa0240920:intron |
| TCATGTAGTTCATTTAAGAA+GGG | 0.561156 | 2_2:+16360257 | None:intergenic |
| CTACTCCAAATACTATAGCT+GGG | 0.575062 | 2_2:-16360461 | Msa0240920:CDS |
| TAATACATGAAGTTTGGCAA+TGG | 0.578889 | 2_2:-16360136 | Msa0240920:intron |
| TCGATGAAATTATTGATGCA+GGG | 0.579583 | 2_2:-16361640 | Msa0240920:intron |
| GAAGGATGTTCTTCACAGAA+GGG | 0.583930 | 2_2:+16362243 | None:intergenic |
| ATTTCAAATATCAATATCAG+GGG | 0.603800 | 2_2:+16359901 | None:intergenic |
| CAACATACCTGTTCAGACAA+AGG | 0.612109 | 2_2:+16360405 | None:intergenic |
| TGCAAGATGTTCCCTAGCTG+AGG | 0.615227 | 2_2:+16360284 | None:intergenic |
| CAGAAAACAACCTGAGCAGG+AGG | 0.629118 | 2_2:+16361827 | None:intergenic |
| GAGCTTGGAAGGAGACATGA+CGG | 0.643917 | 2_2:+16363140 | None:intergenic |
| TTTCACAGCACAAGTAACAT+CGG | 0.651808 | 2_2:+16360037 | None:intergenic |
| TTGGCCAACCAATAGTGCAA+AGG | 0.655463 | 2_2:-16362171 | Msa0240920:CDS |
| AGACATGACGGAGAAAGCGT+CGG | 0.655801 | 2_2:+16363152 | None:intergenic |
| GGATTCTGATGGGAGACGTG+TGG | 0.674441 | 2_2:-16362216 | Msa0240920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTATGCTATCAAA+GGG | + | chr2_2:16362729-16362748 | None:intergenic | 15.0% |
| !!! | AAATTTTTTTATGCTATCAA+AGG | + | chr2_2:16362730-16362749 | None:intergenic | 15.0% |
| !! | TTAAATTAAACTCACTTATT+TGG | - | chr2_2:16362748-16362767 | Msa0240920:intron | 15.0% |
| !! | TAAATTAAACTCACTTATTT+GGG | - | chr2_2:16362749-16362768 | Msa0240920:intron | 15.0% |
| !! | CAAAAATAAAATGATAATCG+TGG | + | chr2_2:16360079-16360098 | None:intergenic | 20.0% |
| !!! | TTTTTGTGTGATTTTGATTT+TGG | - | chr2_2:16360184-16360203 | Msa0240920:intron | 20.0% |
| !!! | TTAGTAATAGCTCTAAATTA+TGG | - | chr2_2:16360334-16360353 | Msa0240920:intron | 20.0% |
| !!! | AATAATGGTTCTAAAAATGT+GGG | + | chr2_2:16360442-16360461 | None:intergenic | 20.0% |
| !!! | TAATAATGGTTCTAAAAATG+TGG | + | chr2_2:16360443-16360462 | None:intergenic | 20.0% |
| !! | CCTTTAAACTGTTATAATAA+TGG | + | chr2_2:16360457-16360476 | None:intergenic | 20.0% |
| !! | CCATTATTATAACAGTTTAA+AGG | - | chr2_2:16360454-16360473 | Msa0240920:CDS | 20.0% |
| !!! | TTTATTTTGTGAGAAGAATT+TGG | - | chr2_2:16361038-16361057 | Msa0240920:intron | 20.0% |
| !! | AAATCATTAGAAAGAAAATC+TGG | - | chr2_2:16361710-16361729 | Msa0240920:intron | 20.0% |
| !! | AATCATTAGAAAGAAAATCT+GGG | - | chr2_2:16361711-16361730 | Msa0240920:intron | 20.0% |
| !!! | ATCTTTTCATTTAATAGCTA+TGG | + | chr2_2:16361892-16361911 | None:intergenic | 20.0% |
| !! | TATAATTATGGAAATCACAA+TGG | + | chr2_2:16362199-16362218 | None:intergenic | 20.0% |
| !! | ATAAGATCATTAATACATGT+TGG | - | chr2_2:16362934-16362953 | Msa0240920:intron | 20.0% |
| !! | TAAGATCATTAATACATGTT+GGG | - | chr2_2:16362935-16362954 | Msa0240920:intron | 20.0% |
| !! | TATCATTAATACATGAAGTT+TGG | - | chr2_2:16362959-16362978 | Msa0240920:intron | 20.0% |
| !!! | ACTTTTGTTTTTCCTATATT+TGG | - | chr2_2:16362999-16363018 | Msa0240920:intron | 20.0% |
| !! | AGATTCTTAAAACCAAATAT+AGG | + | chr2_2:16363014-16363033 | None:intergenic | 20.0% |
| ! | CAACAAGAAACATAAAATGT+TGG | + | chr2_2:16360276-16360295 | None:intergenic | 25.0% |
| !! | CAACATTTTATGTTTCTTGT+TGG | - | chr2_2:16360274-16360293 | Msa0240920:CDS | 25.0% |
| ! | ACCTAAAAAAACGCATATTA+CGG | + | chr2_2:16360379-16360398 | None:intergenic | 25.0% |
| ! | ATCTATAAGTATCTCTGTAT+AGG | + | chr2_2:16360543-16360562 | None:intergenic | 25.0% |
| !! | TTGTATTGTGTGTTATTGTT+AGG | - | chr2_2:16360828-16360847 | Msa0240920:intron | 25.0% |
| ! | ATAAAAAATACCTCTAGACA+AGG | + | chr2_2:16361023-16361042 | None:intergenic | 25.0% |
| ! | TATCTATGTGTGATATTCAA+AGG | - | chr2_2:16361310-16361329 | Msa0240920:intron | 25.0% |
| ! | TCTTCCATTATTTGTTTGTT+AGG | - | chr2_2:16361523-16361542 | Msa0240920:intron | 25.0% |
| ! | AGAACCTAACAAACAAATAA+TGG | + | chr2_2:16361530-16361549 | None:intergenic | 25.0% |
| !! | ATTCAAATCTACACTGATTA+AGG | + | chr2_2:16361740-16361759 | None:intergenic | 25.0% |
| !! | TTAGATCAAAACGATAGTTT+TGG | - | chr2_2:16361917-16361936 | Msa0240920:CDS | 25.0% |
| ! | TGCTAAAATTCAAATACAGT+GGG | + | chr2_2:16362225-16362244 | None:intergenic | 25.0% |
| ! | TTGCTAAAATTCAAATACAG+TGG | + | chr2_2:16362226-16362245 | None:intergenic | 25.0% |
| !! | CTTTTAACAAGGGTTTTTAA+GGG | + | chr2_2:16362305-16362324 | None:intergenic | 25.0% |
| !! | TCTTTTAACAAGGGTTTTTA+AGG | + | chr2_2:16362306-16362325 | None:intergenic | 25.0% |
| ! | CTTTCAAGAAGAGTTTATAA+AGG | + | chr2_2:16362335-16362354 | None:intergenic | 25.0% |
| ! | ATCAAAGGAAATGAATAAGA+AGG | + | chr2_2:16362423-16362442 | None:intergenic | 25.0% |
| !!! | ATTCATTTCCTTTGATTTGA+TGG | - | chr2_2:16362427-16362446 | Msa0240920:intron | 25.0% |
| ! | ATATGTATCCATCAAATCAA+AGG | + | chr2_2:16362438-16362457 | None:intergenic | 25.0% |
| !! | TTGATTTGATGGATACATAT+AGG | - | chr2_2:16362438-16362457 | Msa0240920:intron | 25.0% |
| !! | TGATTTGATGGATACATATA+GGG | - | chr2_2:16362439-16362458 | Msa0240920:intron | 25.0% |
| ! | GAATAATACTGCACAAAATA+TGG | + | chr2_2:16362614-16362633 | None:intergenic | 25.0% |
| ! | TCATGTAGTTCATTTAAGAA+GGG | + | chr2_2:16362847-16362866 | None:intergenic | 25.0% |
| ! | TTCATGTAGTTCATTTAAGA+AGG | + | chr2_2:16362848-16362867 | None:intergenic | 25.0% |
| ! | TAAATGAACTACATGAAGTT+TGG | - | chr2_2:16362851-16362870 | Msa0240920:intron | 25.0% |
| ! | GCAATATCATGAAATTTAAC+TGG | + | chr2_2:16363149-16363168 | None:intergenic | 25.0% |
| GCAAATGTTGAAGACTAAAT+CGG | + | chr2_2:16360049-16360068 | None:intergenic | 30.0% | |
| AATGTTGGATCAAACGAAAA+AGG | + | chr2_2:16360261-16360280 | None:intergenic | 30.0% | |
| TCTAAAAATGTGGGAAAATG+CGG | + | chr2_2:16360433-16360452 | None:intergenic | 30.0% | |
| !!! | GTTTTAGAACCATTAGTTTG+TGG | - | chr2_2:16360668-16360687 | Msa0240920:intron | 30.0% |
| TGCTAAAAATTGAGTGAAGT+TGG | - | chr2_2:16360736-16360755 | Msa0240920:intron | 30.0% | |
| ! | TGAAGATAAGAGATTTTGTG+AGG | - | chr2_2:16360782-16360801 | Msa0240920:intron | 30.0% |
| CTAAGTATTTCACAGATGAT+TGG | - | chr2_2:16360911-16360930 | Msa0240920:intron | 30.0% | |
| TTGTATATGACCTACTTTGA+TGG | - | chr2_2:16361096-16361115 | Msa0240920:intron | 30.0% | |
| TGTATATGACCTACTTTGAT+GGG | - | chr2_2:16361097-16361116 | Msa0240920:intron | 30.0% | |
| TAAAAACAACCCATCAAAGT+AGG | + | chr2_2:16361109-16361128 | None:intergenic | 30.0% | |
| !!! | TTTGATGGGTTGTTTTTATG+TGG | - | chr2_2:16361111-16361130 | Msa0240920:intron | 30.0% |
| !!! | TTGATGGGTTGTTTTTATGT+GGG | - | chr2_2:16361112-16361131 | Msa0240920:intron | 30.0% |
| TAACAAAGAAGTGAAGATCT+TGG | + | chr2_2:16361187-16361206 | None:intergenic | 30.0% | |
| ATCTTCACTTCTTTGTTACT+GGG | - | chr2_2:16361189-16361208 | Msa0240920:intron | 30.0% | |
| AGAAACCAGTAATATTGTCA+AGG | + | chr2_2:16361368-16361387 | None:intergenic | 30.0% | |
| ATCGATGAAATTATTGATGC+AGG | - | chr2_2:16361460-16361479 | Msa0240920:intron | 30.0% | |
| TCGATGAAATTATTGATGCA+GGG | - | chr2_2:16361461-16361480 | Msa0240920:intron | 30.0% | |
| ATAAAAACAAAAGTCGCACA+AGG | - | chr2_2:16361670-16361689 | Msa0240920:CDS | 30.0% | |
| GAAAAAATTAGTGAAACCTC+AGG | + | chr2_2:16361775-16361794 | None:intergenic | 30.0% | |
| ! | CTCTTTGGAAGTTTGAATAA+TGG | - | chr2_2:16361965-16361984 | Msa0240920:CDS | 30.0% |
| ATAAACTCCATCCAAGATTT+AGG | + | chr2_2:16362082-16362101 | None:intergenic | 30.0% | |
| TCCTTAATTCTATTTCCTCT+TGG | - | chr2_2:16362113-16362132 | Msa0240920:intron | 30.0% | |
| ACCAAGAGGAAATAGAATTA+AGG | + | chr2_2:16362117-16362136 | None:intergenic | 30.0% | |
| ACAACAAAAAAGAAACCAAG+AGG | + | chr2_2:16362131-16362150 | None:intergenic | 30.0% | |
| !!! | TCTTGGTTTCTTTTTTGTTG+TGG | - | chr2_2:16362130-16362149 | Msa0240920:CDS | 30.0% |
| !!! | CTTGGTTTCTTTTTTGTTGT+GGG | - | chr2_2:16362131-16362150 | Msa0240920:CDS | 30.0% |
| TACAGTGGGACTTATAATTA+TGG | + | chr2_2:16362211-16362230 | None:intergenic | 30.0% | |
| AGAAGAGTTTATAAAGGTGA+AGG | + | chr2_2:16362329-16362348 | None:intergenic | 30.0% | |
| AAGAAGGAAGTTGAGAAAAA+AGG | + | chr2_2:16362407-16362426 | None:intergenic | 30.0% | |
| AATTGTGATAGAGAGGAATT+GGG | + | chr2_2:16362465-16362484 | None:intergenic | 30.0% | |
| TGAAAATGAGGTAAAAACCT+AGG | + | chr2_2:16362509-16362528 | None:intergenic | 30.0% | |
| GAAATATGAAGGTGAAAATG+AGG | + | chr2_2:16362521-16362540 | None:intergenic | 30.0% | |
| CAAAGAAGAGAGAAATATGA+AGG | + | chr2_2:16362532-16362551 | None:intergenic | 30.0% | |
| ! | TGCTCCTTATTTATTTGTCT+CGG | - | chr2_2:16362556-16362575 | Msa0240920:intron | 30.0% |
| ATGAATATTTAGTGAGACTG+GGG | + | chr2_2:16362587-16362606 | None:intergenic | 30.0% | |
| GATGAATATTTAGTGAGACT+GGG | + | chr2_2:16362588-16362607 | None:intergenic | 30.0% | |
| AGATGAATATTTAGTGAGAC+TGG | + | chr2_2:16362589-16362608 | None:intergenic | 30.0% | |
| ! | TTTTTATGCTATCAAAGGGA+AGG | + | chr2_2:16362725-16362744 | None:intergenic | 30.0% |
| TAATACATGAAGTTTGGCAA+TGG | - | chr2_2:16362965-16362984 | Msa0240920:intron | 30.0% | |
| ! | ATGCAGCAGTATTTAGCTTA+GGG | - | chr2_2:16360221-16360240 | Msa0240920:intron | 35.0% |
| !!! | GCCGTAATATGCGTTTTTTT+AGG | - | chr2_2:16360375-16360394 | Msa0240920:intron | 35.0% |
| !! | AACCATTAGTTTGTGGAAGT+TGG | - | chr2_2:16360675-16360694 | Msa0240920:intron | 35.0% |
| !! | ACCATTAGTTTGTGGAAGTT+GGG | - | chr2_2:16360676-16360695 | Msa0240920:intron | 35.0% |
| ! | TCTTTTTGTTGAACCTTGCT+TGG | - | chr2_2:16360708-16360727 | Msa0240920:intron | 35.0% |
| ! | TTTTAGCACAAAACCAAGCA+AGG | + | chr2_2:16360724-16360743 | None:intergenic | 35.0% |
| !! | GATTTTGTGAGGTGTTTTTG+AGG | - | chr2_2:16360793-16360812 | Msa0240920:intron | 35.0% |
| ! | TGTGAAGAACATCCTTCTTT+TGG | - | chr2_2:16360864-16360883 | Msa0240920:intron | 35.0% |
| ! | ATCCTTCTTTTGGATTCTGA+TGG | - | chr2_2:16360874-16360893 | Msa0240920:intron | 35.0% |
| ! | TCCTTCTTTTGGATTCTGAT+GGG | - | chr2_2:16360875-16360894 | Msa0240920:intron | 35.0% |
| AAAAGCTTCCTTTGCACTAT+TGG | + | chr2_2:16360941-16360960 | None:intergenic | 35.0% | |
| GATCTTCACTTCTTTGTTAC+TGG | - | chr2_2:16361188-16361207 | Msa0240920:intron | 35.0% | |
| !!! | CAGGCATTTTTTGATTCAGT+TGG | - | chr2_2:16361251-16361270 | Msa0240920:intron | 35.0% |
| GAAGTCCTTGACAATATTAC+TGG | - | chr2_2:16361360-16361379 | Msa0240920:intron | 35.0% | |
| !! | CGAGTTGAATTTTGGAAGAA+AGG | + | chr2_2:16361574-16361593 | None:intergenic | 35.0% |
| TCTTCCAAAATTCAACTCGT+AGG | - | chr2_2:16361575-16361594 | Msa0240920:intron | 35.0% | |
| TCCAAACTCTAAACCAATCA+GGG | + | chr2_2:16361850-16361869 | None:intergenic | 35.0% | |
| ATGGCAAATAATGAGATCAC+TGG | + | chr2_2:16361873-16361892 | None:intergenic | 35.0% | |
| !!! | ATAGTTTTGGATGAAGCACA+AGG | - | chr2_2:16361930-16361949 | Msa0240920:CDS | 35.0% |
| ACCATGACTTAACCTTAGAA+GGG | - | chr2_2:16362052-16362071 | Msa0240920:intron | 35.0% | |
| ! | ATGTCTTTTCTGGACAAATG+CGG | + | chr2_2:16362260-16362279 | None:intergenic | 35.0% |
| ! | AGGTGAAGGTCTTTTAACAA+GGG | + | chr2_2:16362315-16362334 | None:intergenic | 35.0% |
| ! | AAGGTGAAGGTCTTTTAACA+AGG | + | chr2_2:16362316-16362335 | None:intergenic | 35.0% |
| TGTTTGAACGTTTATCTCTG+AGG | + | chr2_2:16362370-16362389 | None:intergenic | 35.0% | |
| CAATTGTGATAGAGAGGAAT+TGG | + | chr2_2:16362466-16362485 | None:intergenic | 35.0% | |
| CAGTAACAATTGTGATAGAG+AGG | + | chr2_2:16362472-16362491 | None:intergenic | 35.0% | |
| ACTACTCCAAATACTATAGC+TGG | - | chr2_2:16362639-16362658 | Msa0240920:intron | 35.0% | |
| CTACTCCAAATACTATAGCT+GGG | - | chr2_2:16362640-16362659 | Msa0240920:intron | 35.0% | |
| ACTTTCCCAGCTATAGTATT+TGG | + | chr2_2:16362648-16362667 | None:intergenic | 35.0% | |
| AATACTATAGCTGGGAAAGT+TGG | - | chr2_2:16362648-16362667 | Msa0240920:intron | 35.0% | |
| GGAAGTAATAGTACAGATTC+TGG | - | chr2_2:16362669-16362688 | Msa0240920:intron | 35.0% | |
| AACTACATGAAGTTTGGCAA+TGG | - | chr2_2:16362857-16362876 | Msa0240920:intron | 35.0% | |
| ! | AACATCGGTATTCAAGTTTG+AGG | + | chr2_2:16363052-16363071 | None:intergenic | 35.0% |
| TTTCACAGCACAAGTAACAT+CGG | + | chr2_2:16363067-16363086 | None:intergenic | 35.0% | |
| ! | CATGCAGCAGTATTTAGCTT+AGG | - | chr2_2:16360220-16360239 | Msa0240920:intron | 40.0% |
| GTTGGATCAAACGAAAAAGG+AGG | + | chr2_2:16360258-16360277 | None:intergenic | 40.0% | |
| ATGGTCCTCAATTGCAATTG+TGG | - | chr2_2:16360353-16360372 | Msa0240920:intron | 40.0% | |
| AGAAAGTTTAGCCGAGTTCA+AGG | - | chr2_2:16360508-16360527 | Msa0240920:intron | 40.0% | |
| TGAGTCAACTCCTTACCAAT+TGG | - | chr2_2:16360622-16360641 | Msa0240920:intron | 40.0% | |
| !! | CCATTAGTTTGTGGAAGTTG+GGG | - | chr2_2:16360677-16360696 | Msa0240920:intron | 40.0% |
| GAAGGATGTTCTTCACAGAA+GGG | + | chr2_2:16360861-16360880 | None:intergenic | 40.0% | |
| AGAAGGATGTTCTTCACAGA+AGG | + | chr2_2:16360862-16360881 | None:intergenic | 40.0% | |
| TCCCATCAGAATCCAAAAGA+AGG | + | chr2_2:16360879-16360898 | None:intergenic | 40.0% | |
| TATCTTATCCTCAGTTCTGC+AGG | - | chr2_2:16361232-16361251 | Msa0240920:intron | 40.0% | |
| AAAAAATGCCTGCAGAACTG+AGG | + | chr2_2:16361243-16361262 | None:intergenic | 40.0% | |
| TATCAGAAAACAACCTGAGC+AGG | + | chr2_2:16361280-16361299 | None:intergenic | 40.0% | |
| GTGTTATCAATCTGTCACCA+TGG | - | chr2_2:16361332-16361351 | Msa0240920:intron | 40.0% | |
| TCAATCTGTCACCATGGAAT+TGG | - | chr2_2:16361338-16361357 | Msa0240920:intron | 40.0% | |
| ! | TTGCCTCTGGAGGAAAAAAT+GGG | + | chr2_2:16361391-16361410 | None:intergenic | 40.0% |
| ! | ATTGCCTCTGGAGGAAAAAA+TGG | + | chr2_2:16361392-16361411 | None:intergenic | 40.0% |
| !! | AGCTCCTACGAGTTGAATTT+TGG | + | chr2_2:16361582-16361601 | None:intergenic | 40.0% |
| AAAACAAAAGTCGCACAAGG+CGG | - | chr2_2:16361673-16361692 | Msa0240920:CDS | 40.0% | |
| CCAAACTCTAAACCAATCAG+GGG | + | chr2_2:16361849-16361868 | None:intergenic | 40.0% | |
| GTCCAAACTCTAAACCAATC+AGG | + | chr2_2:16361851-16361870 | None:intergenic | 40.0% | |
| GATGAAGCACAAGGTTACAT+GGG | - | chr2_2:16361939-16361958 | Msa0240920:CDS | 40.0% | |
| TGACTTAACCTTAGAAGGCA+TGG | + | chr2_2:16362000-16362019 | None:intergenic | 40.0% | |
| !! | TGCCTTCTAAGGTTAAGTCA+TGG | - | chr2_2:16362000-16362019 | Msa0240920:intron | 40.0% |
| GACCATGACTTAACCTTAGA+AGG | + | chr2_2:16362051-16362070 | None:intergenic | 40.0% | |
| GACCATGACTTAACCTTAGA+AGG | - | chr2_2:16362051-16362070 | Msa0240920:intron | 40.0% | |
| CCATGACTTAACCTTAGAAG+GGG | - | chr2_2:16362053-16362072 | Msa0240920:intron | 40.0% | |
| ! | TTTTCTGGACAAATGCGGTT+TGG | + | chr2_2:16362255-16362274 | None:intergenic | 40.0% |
| ! | TCAGAGGGAAATGTCTTTTC+TGG | + | chr2_2:16362270-16362289 | None:intergenic | 40.0% |
| !! | ACAAGGGTTTTTAAGGGTGA+AGG | + | chr2_2:16362299-16362318 | None:intergenic | 40.0% |
| GGAAGTTGAGAAAAAAGGCT+TGG | + | chr2_2:16362402-16362421 | None:intergenic | 40.0% | |
| AGGGCCGAGACAAATAAATA+AGG | + | chr2_2:16362563-16362582 | None:intergenic | 40.0% | |
| TATTTAGTGAGACTGGGGAA+GGG | + | chr2_2:16362582-16362601 | None:intergenic | 40.0% | |
| ATATTTAGTGAGACTGGGGA+AGG | + | chr2_2:16362583-16362602 | None:intergenic | 40.0% | |
| CAACATACCTGTTCAGACAA+AGG | + | chr2_2:16362699-16362718 | None:intergenic | 40.0% | |
| GACTTAGTGTCTGCAAAAGA+AGG | + | chr2_2:16362788-16362807 | None:intergenic | 40.0% | |
| AGAGAGATTACGAGCTTGGA+AGG | + | chr2_2:16359975-16359994 | None:intergenic | 45.0% | |
| AGAGAGAGAGATTACGAGCT+TGG | + | chr2_2:16359979-16359998 | None:intergenic | 45.0% | |
| TACGGCCACAATTGCAATTG+AGG | + | chr2_2:16360361-16360380 | None:intergenic | 45.0% | |
| GGCTCTATAAGCCTTGAACT+CGG | + | chr2_2:16360522-16360541 | None:intergenic | 45.0% | |
| CACATTAGGACTTCGTTGGT+GGG | + | chr2_2:16360568-16360587 | None:intergenic | 45.0% | |
| CACCAACGAAGTCCTAATGT+GGG | - | chr2_2:16360567-16360586 | Msa0240920:intron | 45.0% | |
| GTCAGTCAGTCCAATTGGTA+AGG | + | chr2_2:16360635-16360654 | None:intergenic | 45.0% | |
| CTGAAGTCAGTCAGTCCAAT+TGG | + | chr2_2:16360640-16360659 | None:intergenic | 45.0% | |
| CCCCAACTTCCACAAACTAA+TGG | + | chr2_2:16360680-16360699 | None:intergenic | 45.0% | |
| TTGGCCAACCAATAGTGCAA+AGG | - | chr2_2:16360930-16360949 | Msa0240920:intron | 45.0% | |
| GCTTCCTTTGCACTATTGGT+TGG | + | chr2_2:16360937-16360956 | None:intergenic | 45.0% | |
| !!! | GGTTGTTTTTATGTGGGCAG+CGG | - | chr2_2:16361118-16361137 | Msa0240920:intron | 45.0% |
| GTCAAGGACTTCCAATTCCA+TGG | + | chr2_2:16361352-16361371 | None:intergenic | 45.0% | |
| !!! | TCTCCCATTTTTTCCTCCAG+AGG | - | chr2_2:16361385-16361404 | Msa0240920:intron | 45.0% |
| ! | TTTTTCCTCCAGAGGCAATG+TGG | - | chr2_2:16361393-16361412 | Msa0240920:intron | 45.0% |
| GCAGGGTATGTCATTCTCAT+AGG | - | chr2_2:16361478-16361497 | Msa0240920:intron | 45.0% | |
| GAATACCTGATACGTACCTG+AGG | - | chr2_2:16361756-16361775 | Msa0240920:intron | 45.0% | |
| TGAAACCTCAGGTACGTATC+AGG | + | chr2_2:16361764-16361783 | None:intergenic | 45.0% | |
| !! | CCCCTGATTGGTTTAGAGTT+TGG | - | chr2_2:16361846-16361865 | Msa0240920:CDS | 45.0% |
| GGATGAAGCACAAGGTTACA+TGG | - | chr2_2:16361938-16361957 | Msa0240920:CDS | 45.0% | |
| AGGTTACATGGGTGTCTCTT+TGG | - | chr2_2:16361950-16361969 | Msa0240920:CDS | 45.0% | |
| !! | CCCCTTCTAAGGTTAAGTCA+TGG | + | chr2_2:16362056-16362075 | None:intergenic | 45.0% |
| GATTTAGGTCACCCCTTCTA+AGG | + | chr2_2:16362067-16362086 | None:intergenic | 45.0% | |
| AGAAGGGGTGACCTAAATCT+TGG | - | chr2_2:16362068-16362087 | Msa0240920:intron | 45.0% | |
| GTGCTAGAACTATGGATGTG+CGG | + | chr2_2:16362167-16362186 | None:intergenic | 45.0% | |
| GAAATCACAATGGAGCAGCA+AGG | + | chr2_2:16362189-16362208 | None:intergenic | 45.0% | |
| GGGTGAAGGATAAGATCAGA+GGG | + | chr2_2:16362285-16362304 | None:intergenic | 45.0% | |
| AGGGTGAAGGATAAGATCAG+AGG | + | chr2_2:16362286-16362305 | None:intergenic | 45.0% | |
| CTGCGAGTCTTTCATTTCCT+AGG | - | chr2_2:16362489-16362508 | Msa0240920:intron | 45.0% | |
| GCAGACACTAAGTCAAGCAT+TGG | - | chr2_2:16362794-16362813 | Msa0240920:intron | 45.0% | |
| ! | AGACATGACGGAGAAAGCGT+CGG | + | chr2_2:16359952-16359971 | None:intergenic | 50.0% |
| GAGCTTGGAAGGAGACATGA+CGG | + | chr2_2:16359964-16359983 | None:intergenic | 50.0% | |
| CGACATTGCAACCGCAATTG+TGG | - | chr2_2:16360407-16360426 | Msa0240920:intron | 50.0% | |
| GGAAAATGCGGCCACAATTG+CGG | + | chr2_2:16360421-16360440 | None:intergenic | 50.0% | |
| CCACATTAGGACTTCGTTGG+TGG | + | chr2_2:16360569-16360588 | None:intergenic | 50.0% | |
| CCACCAACGAAGTCCTAATG+TGG | - | chr2_2:16360566-16360585 | Msa0240920:intron | 50.0% | |
| TGCCCACATTAGGACTTCGT+TGG | + | chr2_2:16360572-16360591 | None:intergenic | 50.0% | |
| ! | GAGTTGACTCATACCCTGCA+AGG | + | chr2_2:16360613-16360632 | None:intergenic | 50.0% |
| AAGACCAATGCTCGCACTGA+AGG | - | chr2_2:16360988-16361007 | Msa0240920:intron | 50.0% | |
| GTGAGTGCTTCCTTGTCTAG+AGG | - | chr2_2:16361010-16361029 | Msa0240920:intron | 50.0% | |
| CAGAAAACAACCTGAGCAGG+AGG | + | chr2_2:16361277-16361296 | None:intergenic | 50.0% | |
| CTTCTTGTCCACATTGCCTC+TGG | + | chr2_2:16361404-16361423 | None:intergenic | 50.0% | |
| CAGAGGCAATGTGGACAAGA+AGG | - | chr2_2:16361402-16361421 | Msa0240920:intron | 50.0% | |
| ! | TGTGGACAAGAAGGAAGCAC+TGG | - | chr2_2:16361411-16361430 | Msa0240920:intron | 50.0% |
| !! | GAAGGAAGCACTGGAGAACT+TGG | - | chr2_2:16361420-16361439 | Msa0240920:intron | 50.0% |
| !! | ACCAATCAGGGGCATCTAAC+TGG | + | chr2_2:16361838-16361857 | None:intergenic | 50.0% |
| ! | GCTCTAAGCCATGCCTTCTA+AGG | - | chr2_2:16361989-16362008 | Msa0240920:intron | 50.0% |
| GGGGTGACCTAAATCTTGGA+TGG | - | chr2_2:16362072-16362091 | Msa0240920:intron | 50.0% | |
| ! | GCAGCAAGGTGCTAGAACTA+TGG | + | chr2_2:16362175-16362194 | None:intergenic | 50.0% |
| TGGAGCTCCTTTGTCTGAAC+AGG | - | chr2_2:16362689-16362708 | Msa0240920:intron | 50.0% | |
| !! | TCAAGCATTGGCCTCAGCTA+GGG | - | chr2_2:16362806-16362825 | Msa0240920:intron | 50.0% |
| TGCAAGATGTTCCCTAGCTG+AGG | + | chr2_2:16362820-16362839 | None:intergenic | 50.0% | |
| CGAAGTCCTAATGTGGGCAG+CGG | - | chr2_2:16360573-16360592 | Msa0240920:intron | 55.0% | |
| GAAGTCCTAATGTGGGCAGC+GGG | - | chr2_2:16360574-16360593 | Msa0240920:intron | 55.0% | |
| AGCTGAACCTACGCCTTGCA+GGG | - | chr2_2:16360597-16360616 | Msa0240920:intron | 55.0% | |
| ACTCATACCCTGCAAGGCGT+AGG | + | chr2_2:16360607-16360626 | None:intergenic | 55.0% | |
| GGATTCTGATGGGAGACGTG+TGG | - | chr2_2:16360885-16360904 | Msa0240920:intron | 55.0% | |
| CTCACCTTCAGTGCGAGCAT+TGG | + | chr2_2:16360995-16361014 | None:intergenic | 55.0% | |
| ! | ATTCAGTTGGCCTCCTGCTC+AGG | - | chr2_2:16361264-16361283 | Msa0240920:intron | 55.0% |
| CTTGTCCACATTGCCTCTGG+AGG | + | chr2_2:16361401-16361420 | None:intergenic | 55.0% | |
| GCCAGTTAGATGCCCCTGAT+TGG | - | chr2_2:16361834-16361853 | Msa0240920:intron | 55.0% | |
| !! | GTCAAGCATTGGCCTCAGCT+AGG | - | chr2_2:16362805-16362824 | Msa0240920:intron | 55.0% |
| GAGCTGAACCTACGCCTTGC+AGG | - | chr2_2:16360596-16360615 | Msa0240920:intron | 60.0% | |
| CAGCTCCCGCTGCCCACATT+AGG | + | chr2_2:16360582-16360601 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 16359907 | 16363216 | 16359907 | ID=Msa0240920;Name=Msa0240920 |
| chr2_2 | mRNA | 16359907 | 16363216 | 16359907 | ID=Msa0240920-mRNA-1;Parent=Msa0240920;Name=Msa0240920-mRNA-1;_AED=0.13;_eAED=0.13;_QI=59|1|1|1|0.83|0.71|7|251|182 |
| chr2_2 | exon | 16359907 | 16360150 | 16359907 | ID=Msa0240920-mRNA-1:exon:6707;Parent=Msa0240920-mRNA-1 |
| chr2_2 | exon | 16360259 | 16360325 | 16360259 | ID=Msa0240920-mRNA-1:exon:6706;Parent=Msa0240920-mRNA-1 |
| chr2_2 | exon | 16360413 | 16360497 | 16360413 | ID=Msa0240920-mRNA-1:exon:6705;Parent=Msa0240920-mRNA-1 |
| chr2_2 | exon | 16361641 | 16361718 | 16361641 | ID=Msa0240920-mRNA-1:exon:6704;Parent=Msa0240920-mRNA-1 |
| chr2_2 | exon | 16361838 | 16361985 | 16361838 | ID=Msa0240920-mRNA-1:exon:6703;Parent=Msa0240920-mRNA-1 |
| chr2_2 | exon | 16362114 | 16362273 | 16362114 | ID=Msa0240920-mRNA-1:exon:6702;Parent=Msa0240920-mRNA-1 |
| chr2_2 | exon | 16363140 | 16363216 | 16363140 | ID=Msa0240920-mRNA-1:exon:6701;Parent=Msa0240920-mRNA-1 |
| chr2_2 | five_prime_UTR | 16363158 | 16363216 | 16363158 | ID=Msa0240920-mRNA-1:five_prime_utr;Parent=Msa0240920-mRNA-1 |
| chr2_2 | CDS | 16363140 | 16363157 | 16363140 | ID=Msa0240920-mRNA-1:cds;Parent=Msa0240920-mRNA-1 |
| chr2_2 | CDS | 16362114 | 16362273 | 16362114 | ID=Msa0240920-mRNA-1:cds;Parent=Msa0240920-mRNA-1 |
| chr2_2 | CDS | 16361838 | 16361985 | 16361838 | ID=Msa0240920-mRNA-1:cds;Parent=Msa0240920-mRNA-1 |
| chr2_2 | CDS | 16361641 | 16361718 | 16361641 | ID=Msa0240920-mRNA-1:cds;Parent=Msa0240920-mRNA-1 |
| chr2_2 | CDS | 16360413 | 16360497 | 16360413 | ID=Msa0240920-mRNA-1:cds;Parent=Msa0240920-mRNA-1 |
| chr2_2 | CDS | 16360266 | 16360325 | 16360266 | ID=Msa0240920-mRNA-1:cds;Parent=Msa0240920-mRNA-1 |
| chr2_2 | three_prime_UTR | 16360259 | 16360265 | 16360259 | ID=Msa0240920-mRNA-1:three_prime_utr;Parent=Msa0240920-mRNA-1 |
| chr2_2 | three_prime_UTR | 16359907 | 16360150 | 16359907 | ID=Msa0240920-mRNA-1:three_prime_utr;Parent=Msa0240920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
