Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228520 | XP_024629162.1 | 88.813 | 438 | 49 | 0 | 1 | 438 | 1 | 438 | 0.0 | 771 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228520 | sp|A3KPW7|PTAR1_DANRE | 33.188 | 229 | 114 | 6 | 143 | 334 | 93 | 319 | 2.14e-25 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228520 | A0A072TJX1 | 83.656 | 465 | 49 | 1 | 1 | 438 | 1 | 465 | 0.0 | 758 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054780 | Msa1228520 | 0.801611 | 8.297095e-49 | -8.615850e-47 |
| Msa0688390 | Msa1228520 | 0.814924 | 1.202633e-51 | -8.615850e-47 |
| Msa0709400 | Msa1228520 | 0.825214 | 5.295635e-54 | -8.615850e-47 |
| Msa0189320 | Msa1228520 | 0.813283 | 2.768011e-51 | -8.615850e-47 |
| Msa0211150 | Msa1228520 | 0.810764 | 9.798522e-51 | -8.615850e-47 |
| Msa1228520 | Msa1351890 | 0.800607 | 1.331441e-48 | -8.615850e-47 |
| Msa1228520 | Msa1375380 | 0.820029 | 8.511443e-53 | -8.615850e-47 |
| Msa1228520 | Msa1385770 | 0.809099 | 2.237220e-50 | -8.615850e-47 |
| Msa1228520 | Msa1405310 | 0.881473 | 2.331852e-70 | -8.615850e-47 |
| Msa1228520 | Msa1409240 | 0.810593 | 1.067109e-50 | -8.615850e-47 |
| Msa1228520 | Msa1419690 | 0.812245 | 4.670482e-51 | -8.615850e-47 |
| Msa1228520 | Msa1434140 | 0.805944 | 1.045011e-49 | -8.615850e-47 |
| Msa1228520 | Msa1440950 | 0.808876 | 2.496271e-50 | -8.615850e-47 |
| Msa0398670 | Msa1228520 | 0.826285 | 2.949804e-54 | -8.615850e-47 |
| Msa1033400 | Msa1228520 | 0.820889 | 5.404240e-53 | -8.615850e-47 |
| Msa0240920 | Msa1228520 | 0.841185 | 5.538630e-58 | -8.615850e-47 |
| Msa0271510 | Msa1228520 | 0.819396 | 1.187274e-52 | -8.615850e-47 |
| Msa0334550 | Msa1228520 | 0.818725 | 1.687542e-52 | -8.615850e-47 |
| Msa1124960 | Msa1228520 | 0.818541 | 1.857689e-52 | -8.615850e-47 |
| Msa1183950 | Msa1228520 | 0.883347 | 4.846372e-71 | -8.615850e-47 |
| Msa0596800 | Msa1228520 | 0.800572 | 1.353267e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228520 | MtrunA17_Chr8g0335281 | 83.441 | 465 | 50 | 1 | 1 | 438 | 1 | 465 | 0.0 | 755 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228520 | AT1G10095.1 | 48.430 | 446 | 195 | 7 | 1 | 438 | 1 | 419 | 2.00e-131 | 385 |
| Msa1228520 | AT1G10095.2 | 50.118 | 425 | 177 | 8 | 1 | 416 | 1 | 399 | 6.80e-131 | 384 |
| Msa1228520 | AT1G10095.3 | 51.515 | 330 | 127 | 5 | 1 | 323 | 1 | 304 | 8.61e-105 | 313 |
| Msa1228520 | AT1G10095.4 | 51.368 | 329 | 127 | 5 | 1 | 322 | 1 | 303 | 3.80e-104 | 311 |
Find 97 sgRNAs with CRISPR-Local
Find 471 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATTTCAAAGAGATTT+TGG | 0.053225 | 8_2:+3964460 | Msa1228520:CDS |
| CTTTATTTGTAAAATTATTT+TGG | 0.061723 | 8_2:-3968291 | None:intergenic |
| ACTCCAAGCTTGTTCACTTT+TGG | 0.178561 | 8_2:-3964113 | None:intergenic |
| TGTAGATTTGAAGACCTTAT+TGG | 0.188433 | 8_2:+3967934 | Msa1228520:CDS |
| CTGCCCTGTTTGCTGATTGA+TGG | 0.205545 | 8_2:-3962792 | None:intergenic |
| AAAGTATAGTTTCTCTTGTT+TGG | 0.245840 | 8_2:-3962833 | None:intergenic |
| TTGGAACAGAGATCATAAAT+TGG | 0.250447 | 8_2:+3962855 | Msa1228520:CDS |
| CTGCTCCTTGACTTGAGATA+TGG | 0.265621 | 8_2:-3968027 | None:intergenic |
| CTTCATTTAACAATGAAAAC+TGG | 0.275914 | 8_2:-3962732 | None:intergenic |
| GAACAGTAACACAATGGTTT+TGG | 0.279747 | 8_2:+3960377 | Msa1228520:five_prime_UTR |
| TAGAAATTCAGAATCGAAAT+TGG | 0.280241 | 8_2:-3960407 | None:intergenic |
| AATGAAGAGTCTAATTCTTA+TGG | 0.301067 | 8_2:+3961659 | Msa1228520:CDS |
| AACAAGAGAAACTATACTTT+TGG | 0.306893 | 8_2:+3962836 | Msa1228520:CDS |
| TTCTGAAAGCTGATTCAAAA+AGG | 0.315689 | 8_2:+3960431 | Msa1228520:five_prime_UTR |
| TTATGACTGCTTGGAATTGC+AGG | 0.316298 | 8_2:+3963073 | Msa1228520:CDS |
| TGTAAGTTGTAGCACAAAAT+AGG | 0.316702 | 8_2:+3968357 | Msa1228520:three_prime_UTR |
| TGTTTCTTGTTTCATACTAT+AGG | 0.339556 | 8_2:-3968489 | None:intergenic |
| GCGGAAGAATCTGCATCTTA+TGG | 0.356630 | 8_2:+3966014 | Msa1228520:CDS |
| AAATGAAGAATCTGGCATTT+CGG | 0.372365 | 8_2:+3962747 | Msa1228520:CDS |
| ATGCAGTGCAGCCCAACTTC+TGG | 0.379066 | 8_2:-3965772 | None:intergenic |
| GTCGCTTTCTTTCCACGTGC+TGG | 0.380037 | 8_2:+3967582 | Msa1228520:CDS |
| CCGTCCATCAATCAGCAAAC+AGG | 0.392249 | 8_2:+3962788 | Msa1228520:CDS |
| GTGAACAAGCTTGGAGTCAT+AGG | 0.403674 | 8_2:+3964119 | Msa1228520:CDS |
| TGGAACAGAGATCATAAATT+GGG | 0.406123 | 8_2:+3962856 | Msa1228520:CDS |
| CTATTATTACCTTCACTGCT+TGG | 0.412692 | 8_2:-3966055 | None:intergenic |
| CAGCAAGTGCCCAAGCCTCT+TGG | 0.415655 | 8_2:+3967884 | Msa1228520:intron |
| AGTTCATTTCCAAGAGGCTT+GGG | 0.418687 | 8_2:-3967893 | None:intergenic |
| GTGCTTGGAATCACCGTTGC+TGG | 0.420371 | 8_2:+3964929 | Msa1228520:CDS |
| TTAAATAGAGAAGATTTCTC+AGG | 0.421703 | 8_2:-3967968 | None:intergenic |
| TCATTGTTAAATGAAGAATC+TGG | 0.425321 | 8_2:+3962739 | Msa1228520:CDS |
| GCTAGCATGTTTCATGACTT+TGG | 0.434326 | 8_2:+3967659 | Msa1228520:CDS |
| CTGTTTGCTGATTGATGGAC+GGG | 0.446849 | 8_2:-3962787 | None:intergenic |
| ATTCTGCTAGTTACATACTT+TGG | 0.453158 | 8_2:+3967768 | Msa1228520:CDS |
| TGCTCCTTGACTTGAGATAT+GGG | 0.453784 | 8_2:-3968026 | None:intergenic |
| CAAAGATGAATTATCGTGCT+TGG | 0.454642 | 8_2:+3964914 | Msa1228520:CDS |
| CTCATACATGACTAAAGAAC+AGG | 0.456796 | 8_2:+3964957 | Msa1228520:CDS |
| CCTGTTTGCTGATTGATGGA+CGG | 0.458368 | 8_2:-3962788 | None:intergenic |
| AAGTCAAGGAGCAGGAGTTT+CGG | 0.461495 | 8_2:+3968036 | Msa1228520:three_prime_UTR |
| CAGAATATGTGGCTTGTGCT+TGG | 0.464432 | 8_2:-3967751 | None:intergenic |
| AGGGCATGACTTATCCAATA+AGG | 0.468882 | 8_2:-3967948 | None:intergenic |
| AGTTGAAGAAATCCAGAAGT+TGG | 0.470128 | 8_2:+3965760 | Msa1228520:CDS |
| TTTGGATCCAGTGATGAGCT+GGG | 0.471807 | 8_2:+3962694 | Msa1228520:intron |
| TAAACAAAGTTCAATGTTGT+CGG | 0.478060 | 8_2:-3962971 | None:intergenic |
| GAGTTCATTTCCAAGAGGCT+TGG | 0.484081 | 8_2:-3967894 | None:intergenic |
| CACCCAAAAGTGAACAAGCT+TGG | 0.486777 | 8_2:+3964110 | Msa1228520:CDS |
| GCGGTTACTGCAGAAAATTA+TGG | 0.487418 | 8_2:+3965977 | Msa1228520:intron |
| TTACATACTTTGGTTGAAAG+TGG | 0.487489 | 8_2:+3967778 | Msa1228520:CDS |
| AAACATGCTAGCTTCCTCCT+TGG | 0.501239 | 8_2:-3967648 | None:intergenic |
| AGCTTCCTCCTTGGAATGGT+CGG | 0.501888 | 8_2:-3967639 | None:intergenic |
| TTTGTCAGGACGAACTCGAT+TGG | 0.506946 | 8_2:+3966885 | Msa1228520:intron |
| TAATTCTTATGGAAATGCTA+CGG | 0.511716 | 8_2:+3961670 | Msa1228520:CDS |
| TACGGGTCTCTTGCATCAGC+TGG | 0.514712 | 8_2:+3961688 | Msa1228520:CDS |
| CAGATTCTTCCGCATTACTT+CGG | 0.515451 | 8_2:-3966004 | None:intergenic |
| GTTGAAGAAATCCAGAAGTT+GGG | 0.520728 | 8_2:+3965761 | Msa1228520:CDS |
| GCTGTGACTTTATGACTGCT+TGG | 0.521973 | 8_2:+3963064 | Msa1228520:CDS |
| TTTAACAATGAAAACTGGGA+TGG | 0.522744 | 8_2:-3962727 | None:intergenic |
| TATTGATAAAGCGTTATGTC+GGG | 0.530806 | 8_2:+3966915 | Msa1228520:CDS |
| AATTCTTATGGAAATGCTAC+GGG | 0.531467 | 8_2:+3961671 | Msa1228520:CDS |
| TAAATAGAGAAGATTTCTCA+GGG | 0.532114 | 8_2:-3967967 | None:intergenic |
| TTTCTAACTGATTCTAGTGA+CGG | 0.533549 | 8_2:+3967614 | Msa1228520:CDS |
| TTCATTTAACAATGAAAACT+GGG | 0.534643 | 8_2:-3962731 | None:intergenic |
| CAAAATAATAAACAATACAT+AGG | 0.536084 | 8_2:-3968095 | None:intergenic |
| TATGTAACTAGCAGAATATG+TGG | 0.536777 | 8_2:-3967762 | None:intergenic |
| GGCGTTTAAACAATACAAGA+TGG | 0.537525 | 8_2:+3962936 | Msa1228520:CDS |
| ATTAGTGTCTAAGAAGAAGC+AGG | 0.548077 | 8_2:+3964036 | Msa1228520:CDS |
| CTACATCTCTTATCTTCTCA+AGG | 0.549991 | 8_2:-3967916 | None:intergenic |
| TGTTTAGCAGCTCTATATAA+CGG | 0.552466 | 8_2:-3962901 | None:intergenic |
| CATATCTCAAGTCAAGGAGC+AGG | 0.555571 | 8_2:+3968028 | Msa1228520:three_prime_UTR |
| GGGGAAAGAATCTGAGCTTG+TGG | 0.560130 | 8_2:+3964481 | Msa1228520:CDS |
| TGCTAGCTTCCTCCTTGGAA+TGG | 0.562432 | 8_2:-3967643 | None:intergenic |
| CAGCAAAAGTCGAGGTGTGA+AGG | 0.567112 | 8_2:-3967709 | None:intergenic |
| GTATGCTTTCAAGATGGTCA+TGG | 0.570789 | 8_2:-3963008 | None:intergenic |
| ATATTGATAAAGCGTTATGT+CGG | 0.571042 | 8_2:+3966914 | Msa1228520:CDS |
| GCTATACATCAATAATGTAT+CGG | 0.584070 | 8_2:-3968467 | None:intergenic |
| TATGCTTTCAAGATGGTCAT+GGG | 0.585632 | 8_2:-3963007 | None:intergenic |
| ACATAATTCATTCTGCAGAA+AGG | 0.585680 | 8_2:-3967684 | None:intergenic |
| CGTCCATCAATCAGCAAACA+GGG | 0.587489 | 8_2:+3962789 | Msa1228520:CDS |
| TCAAAAGTATGCTTTCAAGA+TGG | 0.587892 | 8_2:-3963014 | None:intergenic |
| TTGGATCCAGTGATGAGCTG+GGG | 0.598597 | 8_2:+3962695 | Msa1228520:intron |
| GCGTTTAAACAATACAAGAT+GGG | 0.601607 | 8_2:+3962937 | Msa1228520:CDS |
| AAAATTATTTATCCAGCACG+TGG | 0.606857 | 8_2:-3967594 | None:intergenic |
| TATTTGCACAAATCACTCGT+CGG | 0.606960 | 8_2:-3968325 | None:intergenic |
| TGCTAAACATGCATTTATGA+CGG | 0.607063 | 8_2:+3962915 | Msa1228520:CDS |
| AGTTCCCATATCTCAAGTCA+AGG | 0.608361 | 8_2:+3968022 | Msa1228520:three_prime_UTR |
| TGACGGATCCGACCATTCCA+AGG | 0.613951 | 8_2:+3967631 | Msa1228520:CDS |
| GGGTCTCTTGCATCAGCTGG+AGG | 0.626069 | 8_2:+3961691 | Msa1228520:CDS |
| AGATGGTCATGGGATACTGA+AGG | 0.627744 | 8_2:-3962997 | None:intergenic |
| AAAGCGTTATGTCGGGAGAG+AGG | 0.643432 | 8_2:+3966922 | Msa1228520:CDS |
| TCAAGGAGTTCATTTCCAAG+AGG | 0.647521 | 8_2:-3967899 | None:intergenic |
| TGTATGAGATTAGCCAGCAA+CGG | 0.659532 | 8_2:-3964942 | None:intergenic |
| TTATATTGTCCAAGCAGTGA+AGG | 0.660492 | 8_2:+3966046 | Msa1228520:CDS |
| TATGGAGGACCGAAGTAATG+CGG | 0.664604 | 8_2:+3965995 | Msa1228520:CDS |
| ATCGTCATCAGCAAAAGTCG+AGG | 0.675500 | 8_2:-3967717 | None:intergenic |
| TGGTCATGGGATACTGAAGG+AGG | 0.684375 | 8_2:-3962994 | None:intergenic |
| GTTACTGCAGAAAATTATGG+AGG | 0.691465 | 8_2:+3965980 | Msa1228520:CDS |
| TTGAACGAACAGTAACACAA+TGG | 0.713000 | 8_2:+3960371 | Msa1228520:five_prime_UTR |
| CGGATCCGACCATTCCAAGG+AGG | 0.730357 | 8_2:+3967634 | Msa1228520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCTTAATAAAAAATTG+GGG | - | chr8_2:3961784-3961803 | None:intergenic | 10.0% |
| !! | CAAATTTCTTAATAAAAAAT+TGG | - | chr8_2:3961786-3961805 | None:intergenic | 10.0% |
| !!! | ATTTTTTATTAAGAAATTTG+TGG | + | chr8_2:3961786-3961805 | Msa1228520:intron | 10.0% |
| !!! | TTTTTTATTAAGAAATTTGT+GGG | + | chr8_2:3961787-3961806 | Msa1228520:intron | 10.0% |
| !!! | TGATTAATATATTTTTAAGA+TGG | + | chr8_2:3962072-3962091 | Msa1228520:intron | 10.0% |
| !! | ATATTTATTAAACGAAAAAT+TGG | - | chr8_2:3962496-3962515 | None:intergenic | 10.0% |
| !! | AAAACATAATATAAAGTTTA+AGG | - | chr8_2:3963874-3963893 | None:intergenic | 10.0% |
| !! | AACTAATAATAAACATAAAA+TGG | - | chr8_2:3966955-3966974 | None:intergenic | 10.0% |
| !!! | CTTTATTTGTAAAATTATTT+TGG | - | chr8_2:3968294-3968313 | None:intergenic | 10.0% |
| !!! | TTTTTATGTAATTCTTTGAT+CGG | + | chr8_2:3960806-3960825 | Msa1228520:intron | 15.0% |
| !! | ATGTAATATGTACATATTAT+AGG | + | chr8_2:3961256-3961275 | Msa1228520:intron | 15.0% |
| !! | TGTAATATGTACATATTATA+GGG | + | chr8_2:3961257-3961276 | Msa1228520:intron | 15.0% |
| !! | AAAAGAAAGAAAAAAAACAA+TGG | - | chr8_2:3961588-3961607 | None:intergenic | 15.0% |
| !!! | ATATATTTTTAAGATGGAAA+TGG | + | chr8_2:3962078-3962097 | Msa1228520:intron | 15.0% |
| !! | CTAAAGAAAAATATATGTAA+TGG | - | chr8_2:3962340-3962359 | None:intergenic | 15.0% |
| !! | AGAAAATATAAAAAGATAAG+AGG | - | chr8_2:3963103-3963122 | None:intergenic | 15.0% |
| !! | AATTTGACAATAGAAAATAA+GGG | - | chr8_2:3964234-3964253 | None:intergenic | 15.0% |
| !! | AAATTTGACAATAGAAAATA+AGG | - | chr8_2:3964235-3964254 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCTTTAACATCTT+TGG | + | chr8_2:3964655-3964674 | Msa1228520:intron | 15.0% |
| !!! | AACTATTTTTTCACATATTT+TGG | - | chr8_2:3965391-3965410 | None:intergenic | 15.0% |
| !! | AAAAATTGATTGAAATTGAA+AGG | + | chr8_2:3966393-3966412 | Msa1228520:intron | 15.0% |
| !!! | GAATGAAGATATTATTTTAA+TGG | - | chr8_2:3967038-3967057 | None:intergenic | 15.0% |
| !!! | TTTATATTTTATTGAAACAC+CGG | - | chr8_2:3967129-3967148 | None:intergenic | 15.0% |
| !! | CAAAATAATAAACAATACAT+AGG | - | chr8_2:3968098-3968117 | None:intergenic | 15.0% |
| !!! | AATTTTACAAATAAAGATTC+AGG | + | chr8_2:3968298-3968317 | Msa1228520:three_prime_UTR | 15.0% |
| !! | TAAAAAAAGAACTTGTAGAT+AGG | + | chr8_2:3961132-3961151 | Msa1228520:intron | 20.0% |
| !! | AATATGTACATATTACATGA+GGG | - | chr8_2:3961254-3961273 | None:intergenic | 20.0% |
| !! | TAATATGTACATATTACATG+AGG | - | chr8_2:3961255-3961274 | None:intergenic | 20.0% |
| !!! | TAAAATTTTCCTGAAAATTC+TGG | + | chr8_2:3961396-3961415 | Msa1228520:intron | 20.0% |
| !!! | GATTCTTTTATTGTTCTAAT+AGG | + | chr8_2:3961445-3961464 | Msa1228520:intron | 20.0% |
| !! | AAGGAATCAATTTCTATAAA+GGG | - | chr8_2:3961565-3961584 | None:intergenic | 20.0% |
| !! | TTCATTTAACAATGAAAACT+GGG | - | chr8_2:3962734-3962753 | None:intergenic | 20.0% |
| !!! | AATCCAGAATATCTAAAATA+TGG | - | chr8_2:3963588-3963607 | None:intergenic | 20.0% |
| !!! | AGCTTATTGTATGATTTTTT+TGG | + | chr8_2:3963751-3963770 | Msa1228520:intron | 20.0% |
| !!! | TATGATTTTTTTGGCTTTAT+TGG | + | chr8_2:3963760-3963779 | Msa1228520:intron | 20.0% |
| !!! | TGATTTTATGACTTCATATT+TGG | + | chr8_2:3963822-3963841 | Msa1228520:intron | 20.0% |
| !!! | AATGACATTCTAGAATTATA+AGG | + | chr8_2:3963924-3963943 | Msa1228520:intron | 20.0% |
| !!! | AATATTTATCCTTTTGTGAT+GGG | - | chr8_2:3964176-3964195 | None:intergenic | 20.0% |
| !!! | AAATATTTATCCTTTTGTGA+TGG | - | chr8_2:3964177-3964196 | None:intergenic | 20.0% |
| !!! | AAAGGATAAATATTTTTCAG+AGG | + | chr8_2:3964182-3964201 | Msa1228520:intron | 20.0% |
| !! | GTTCAAAATTTGAACATATA+TGG | - | chr8_2:3964212-3964231 | None:intergenic | 20.0% |
| !!! | TTCAAATTTCAAAGAGATTT+TGG | + | chr8_2:3964460-3964479 | Msa1228520:CDS | 20.0% |
| !!! | TCAAATTTCAAAGAGATTTT+GGG | + | chr8_2:3964461-3964480 | Msa1228520:CDS | 20.0% |
| !! | AGAATTGCATACTATTTAAT+TGG | + | chr8_2:3964533-3964552 | Msa1228520:intron | 20.0% |
| !! | TTACTAGTATATACTAACAT+TGG | + | chr8_2:3964615-3964634 | Msa1228520:intron | 20.0% |
| !!! | TTTGATCTCTGAAAATTAAA+GGG | - | chr8_2:3964898-3964917 | None:intergenic | 20.0% |
| !! | ACATTATATCAACCAAAAAT+GGG | - | chr8_2:3965245-3965264 | None:intergenic | 20.0% |
| !! | TACATTATATCAACCAAAAA+TGG | - | chr8_2:3965246-3965265 | None:intergenic | 20.0% |
| !! | AACTATAGTGCAAATAAAAA+TGG | + | chr8_2:3965607-3965626 | Msa1228520:intron | 20.0% |
| !! | TTTGTCAATGATTTGATTAA+TGG | + | chr8_2:3965688-3965707 | Msa1228520:intron | 20.0% |
| !! | TTGTCAATGATTTGATTAAT+GGG | + | chr8_2:3965689-3965708 | Msa1228520:intron | 20.0% |
| !! | AATTAAAGATGTGCTTATTT+AGG | + | chr8_2:3965728-3965747 | Msa1228520:intron | 20.0% |
| !! | ATAAATGAAATAAATGAGCA+AGG | - | chr8_2:3966081-3966100 | None:intergenic | 20.0% |
| !! | ATATCTTCATTCATTATCTA+TGG | + | chr8_2:3967046-3967065 | Msa1228520:intron | 20.0% |
| !! | TATCTTCATTCATTATCTAT+GGG | + | chr8_2:3967047-3967066 | Msa1228520:intron | 20.0% |
| !! | AGAAATTTAAATGCATATCT+AGG | + | chr8_2:3967329-3967348 | Msa1228520:intron | 20.0% |
| !! | TAGAAAAACATATTGTATTC+GGG | - | chr8_2:3967500-3967519 | None:intergenic | 20.0% |
| !! | GTAGAAAAACATATTGTATT+CGG | - | chr8_2:3967501-3967520 | None:intergenic | 20.0% |
| !!! | CCTAATTTTCTCTTATAAAT+AGG | - | chr8_2:3968142-3968161 | None:intergenic | 20.0% |
| !! | CCTATTTATAAGAGAAAATT+AGG | + | chr8_2:3968139-3968158 | Msa1228520:intron | 20.0% |
| !! | TCAACAAAAGTTAATGTATT+TGG | + | chr8_2:3968162-3968181 | Msa1228520:intron | 20.0% |
| ! | TAGAAATTCAGAATCGAAAT+TGG | - | chr8_2:3960410-3960429 | None:intergenic | 25.0% |
| !!! | TATTTCGTAATGTTTGTTGT+GGG | + | chr8_2:3960475-3960494 | Msa1228520:intron | 25.0% |
| !! | CATTTTATCAAACAGGTAAT+GGG | - | chr8_2:3960552-3960571 | None:intergenic | 25.0% |
| ! | TATTGAAACTTATCATGTTG+TGG | + | chr8_2:3960682-3960701 | Msa1228520:intron | 25.0% |
| !! | ATTATTTTCCTAGTCATACA+AGG | - | chr8_2:3960769-3960788 | None:intergenic | 25.0% |
| ! | TAATTCTTTGATCGGAAAAT+GGG | + | chr8_2:3960814-3960833 | Msa1228520:intron | 25.0% |
| ! | GCTTATACATAAATGCTTAT+AGG | + | chr8_2:3960983-3961002 | Msa1228520:intron | 25.0% |
| !!! | CTACAAGTTCTTTTTTTAGA+AGG | - | chr8_2:3961130-3961149 | None:intergenic | 25.0% |
| !! | AGATTTAAACCAGAATTTTC+AGG | - | chr8_2:3961408-3961427 | None:intergenic | 25.0% |
| ! | GAAGGAATCAATTTCTATAA+AGG | - | chr8_2:3961566-3961585 | None:intergenic | 25.0% |
| ! | GAAAGAAAAAAAACAATGGA+AGG | - | chr8_2:3961584-3961603 | None:intergenic | 25.0% |
| !!! | TTCTTTTTGTTCTTTGAAGT+TGG | + | chr8_2:3961601-3961620 | Msa1228520:intron | 25.0% |
| !!! | GTTTTTACTGACTATACAAA+AGG | - | chr8_2:3961629-3961648 | None:intergenic | 25.0% |
| ! | AATGAAGAGTCTAATTCTTA+TGG | + | chr8_2:3961659-3961678 | Msa1228520:CDS | 25.0% |
| ! | TAATTCTTATGGAAATGCTA+CGG | + | chr8_2:3961670-3961689 | Msa1228520:CDS | 25.0% |
| ! | TTCATAAAAGTAGAATGGTA+AGG | - | chr8_2:3962156-3962175 | None:intergenic | 25.0% |
| !! | CACTTTTCATAAAAGTAGAA+TGG | - | chr8_2:3962161-3962180 | None:intergenic | 25.0% |
| ! | GTCATTCAAAATTGTTAGAA+AGG | + | chr8_2:3962200-3962219 | Msa1228520:intron | 25.0% |
| !! | CAAATTTTGAGCAATTACTT+AGG | - | chr8_2:3962276-3962295 | None:intergenic | 25.0% |
| ! | CTAAGTAATTGCTCAAAATT+TGG | + | chr8_2:3962274-3962293 | Msa1228520:intron | 25.0% |
| ! | TAATTGCTCAAAATTTGGAA+GGG | + | chr8_2:3962279-3962298 | Msa1228520:intron | 25.0% |
| !! | ATATTGATTAACATGAACAC+AGG | - | chr8_2:3962391-3962410 | None:intergenic | 25.0% |
| ! | ATGTTAATCAATATACCATG+TGG | + | chr8_2:3962397-3962416 | Msa1228520:intron | 25.0% |
| ! | CTTCATTTAACAATGAAAAC+TGG | - | chr8_2:3962735-3962754 | None:intergenic | 25.0% |
| ! | TCATTGTTAAATGAAGAATC+TGG | + | chr8_2:3962739-3962758 | Msa1228520:CDS | 25.0% |
| ! | AAAGTATAGTTTCTCTTGTT+TGG | - | chr8_2:3962836-3962855 | None:intergenic | 25.0% |
| !! | AACAAGAGAAACTATACTTT+TGG | + | chr8_2:3962836-3962855 | Msa1228520:CDS | 25.0% |
| ! | TAAACAAAGTTCAATGTTGT+CGG | - | chr8_2:3962974-3962993 | None:intergenic | 25.0% |
| !! | ATTGTTTTCAGTTGCTTAAA+AGG | + | chr8_2:3963176-3963195 | Msa1228520:intron | 25.0% |
| ! | GAACCAAGATAAAAAGATAA+AGG | + | chr8_2:3963198-3963217 | Msa1228520:intron | 25.0% |
| ! | ATAACGACTCTAATTATACA+GGG | - | chr8_2:3963427-3963446 | None:intergenic | 25.0% |
| ! | GAAATATACATATTGAGGTA+CGG | - | chr8_2:3963564-3963583 | None:intergenic | 25.0% |
| ! | ATGGTGAAATATACATATTG+AGG | - | chr8_2:3963569-3963588 | None:intergenic | 25.0% |
| !!! | TCACCATATTTTAGATATTC+TGG | + | chr8_2:3963582-3963601 | Msa1228520:intron | 25.0% |
| !! | CAAATTTCAAAGAGATTTTG+GGG | + | chr8_2:3964462-3964481 | Msa1228520:CDS | 25.0% |
| !! | TTGATCTCTGAAAATTAAAG+GGG | - | chr8_2:3964897-3964916 | None:intergenic | 25.0% |
| !! | CTTTGATCTCTGAAAATTAA+AGG | - | chr8_2:3964899-3964918 | None:intergenic | 25.0% |
| !!! | TTTCACATATTTTGGTGAAA+GGG | - | chr8_2:3965383-3965402 | None:intergenic | 25.0% |
| !!! | TTTTCACATATTTTGGTGAA+AGG | - | chr8_2:3965384-3965403 | None:intergenic | 25.0% |
| ! | TGTCAATGATTTGATTAATG+GGG | + | chr8_2:3965690-3965709 | Msa1228520:intron | 25.0% |
| ! | TAAAACTAGATAGCAATCAA+AGG | - | chr8_2:3966165-3966184 | None:intergenic | 25.0% |
| ! | ATGTAAACTACAAACATGAA+AGG | - | chr8_2:3966308-3966327 | None:intergenic | 25.0% |
| ! | ATTGAAAGGCAAGATAAAAT+TGG | + | chr8_2:3966407-3966426 | Msa1228520:intron | 25.0% |
| ! | AATAATATAACATCCCTATG+AGG | + | chr8_2:3966561-3966580 | Msa1228520:intron | 25.0% |
| !! | TAAATTATAGTCTTGATCGT+TGG | + | chr8_2:3966647-3966666 | Msa1228520:intron | 25.0% |
| ! | TATACTAGTAAAGCTATACA+AGG | - | chr8_2:3966828-3966847 | None:intergenic | 25.0% |
| !! | ATATTGATAAAGCGTTATGT+CGG | + | chr8_2:3966914-3966933 | Msa1228520:CDS | 25.0% |
| ! | AACAATTTCATGAAAAGTCT+CGG | - | chr8_2:3967098-3967117 | None:intergenic | 25.0% |
| ! | ATCTATAACCAAGGTAAAAA+GGG | - | chr8_2:3967224-3967243 | None:intergenic | 25.0% |
| !!! | ACTTTGTTTTACTCCTAATT+AGG | - | chr8_2:3967371-3967390 | None:intergenic | 25.0% |
| ! | TATAAATGTAAATGTGGCTT+TGG | - | chr8_2:3967473-3967492 | None:intergenic | 25.0% |
| ! | GGAATCTATAAATGTAAATG+TGG | - | chr8_2:3967479-3967498 | None:intergenic | 25.0% |
| !!! | CTATAGTAAGTTGTTTTAGA+TGG | + | chr8_2:3967520-3967539 | Msa1228520:intron | 25.0% |
| !!! | TAATGTTGTTCGTTTTAAAC+AGG | + | chr8_2:3967544-3967563 | Msa1228520:intron | 25.0% |
| ! | CTTATCTAGATTACTTAATC+AGG | + | chr8_2:3967842-3967861 | Msa1228520:intron | 25.0% |
| ! | TAAATAGAGAAGATTTCTCA+GGG | - | chr8_2:3967970-3967989 | None:intergenic | 25.0% |
| ! | TTAAATAGAGAAGATTTCTC+AGG | - | chr8_2:3967971-3967990 | None:intergenic | 25.0% |
| !! | TTTTCTCTTATAAATAGGAC+CGG | - | chr8_2:3968137-3968156 | None:intergenic | 25.0% |
| ! | CCTATTTATAAGAGAAACTT+GGG | - | chr8_2:3968224-3968243 | None:intergenic | 25.0% |
| ! | TCCTATTTATAAGAGAAACT+TGG | - | chr8_2:3968225-3968244 | None:intergenic | 25.0% |
| !! | AGTTTTTCCTTGCAAATTTT+TGG | + | chr8_2:3968261-3968280 | Msa1228520:three_prime_UTR | 25.0% |
| !! | GTTTTTCCTTGCAAATTTTT+GGG | + | chr8_2:3968262-3968281 | Msa1228520:three_prime_UTR | 25.0% |
| ! | GCTATACATCAATAATGTAT+CGG | - | chr8_2:3968470-3968489 | None:intergenic | 25.0% |
| !! | TGTTTCTTGTTTCATACTAT+AGG | - | chr8_2:3968492-3968511 | None:intergenic | 25.0% |
| ! | AACAGTAACACAATGGTTTT+GGG | + | chr8_2:3960378-3960397 | Msa1228520:five_prime_UTR | 30.0% |
| ! | TTCTGAAAGCTGATTCAAAA+AGG | + | chr8_2:3960431-3960450 | Msa1228520:five_prime_UTR | 30.0% |
| !! | AAAAAGGTATTTGTCTACAC+TGG | + | chr8_2:3960447-3960466 | Msa1228520:intron | 30.0% |
| ! | CTATTTCGTAATGTTTGTTG+TGG | + | chr8_2:3960474-3960493 | Msa1228520:intron | 30.0% |
| AACAAAAACTGAACACAGAT+CGG | - | chr8_2:3960520-3960539 | None:intergenic | 30.0% | |
| ! | GCATTTTATCAAACAGGTAA+TGG | - | chr8_2:3960553-3960572 | None:intergenic | 30.0% |
| ! | GAATTGGCATTTTATCAAAC+AGG | - | chr8_2:3960559-3960578 | None:intergenic | 30.0% |
| TTGAGACACAAGTGAAAAAT+GGG | - | chr8_2:3960623-3960642 | None:intergenic | 30.0% | |
| ATTGAGACACAAGTGAAAAA+TGG | - | chr8_2:3960624-3960643 | None:intergenic | 30.0% | |
| TAAATGATGATTTGAGCTTC+CGG | + | chr8_2:3960710-3960729 | Msa1228520:intron | 30.0% | |
| GTAATTCTTTGATCGGAAAA+TGG | + | chr8_2:3960813-3960832 | Msa1228520:intron | 30.0% | |
| AATTCTTTGATCGGAAAATG+GGG | + | chr8_2:3960815-3960834 | Msa1228520:intron | 30.0% | |
| GTTATTGAGTATAAGTAACG+TGG | + | chr8_2:3961014-3961033 | Msa1228520:intron | 30.0% | |
| TACCAACTAATCAAAGCATA+CGG | - | chr8_2:3961093-3961112 | None:intergenic | 30.0% | |
| AAATAAACTCATGAGTAACG+AGG | - | chr8_2:3961335-3961354 | None:intergenic | 30.0% | |
| CTGGTTTAAATCTGTTATGT+AGG | + | chr8_2:3961415-3961434 | Msa1228520:intron | 30.0% | |
| AATTCTTATGGAAATGCTAC+GGG | + | chr8_2:3961671-3961690 | Msa1228520:CDS | 30.0% | |
| ATTCCATATCAACATAGTGT+GGG | + | chr8_2:3961849-3961868 | Msa1228520:intron | 30.0% | |
| GTAATTGCTCAAAATTTGGA+AGG | + | chr8_2:3962278-3962297 | Msa1228520:intron | 30.0% | |
| ! | ATGTGTTGATGAACATGTTA+AGG | + | chr8_2:3962363-3962382 | Msa1228520:intron | 30.0% |
| ! | TGTGTTGATGAACATGTTAA+GGG | + | chr8_2:3962364-3962383 | Msa1228520:intron | 30.0% |
| CATGTTAAAGCAAGAAAAGA+AGG | - | chr8_2:3962423-3962442 | None:intergenic | 30.0% | |
| GTTGTTGAGAAATAATAACC+TGG | + | chr8_2:3962559-3962578 | Msa1228520:intron | 30.0% | |
| TAGAAGAAGCAACAAAACAT+GGG | - | chr8_2:3962654-3962673 | None:intergenic | 30.0% | |
| TTAGAAGAAGCAACAAAACA+TGG | - | chr8_2:3962655-3962674 | None:intergenic | 30.0% | |
| TTTAACAATGAAAACTGGGA+TGG | - | chr8_2:3962730-3962749 | None:intergenic | 30.0% | |
| AAATGAAGAATCTGGCATTT+CGG | + | chr8_2:3962747-3962766 | Msa1228520:CDS | 30.0% | |
| TTGGAACAGAGATCATAAAT+TGG | + | chr8_2:3962855-3962874 | Msa1228520:CDS | 30.0% | |
| TGGAACAGAGATCATAAATT+GGG | + | chr8_2:3962856-3962875 | Msa1228520:CDS | 30.0% | |
| TGTTTAGCAGCTCTATATAA+CGG | - | chr8_2:3962904-3962923 | None:intergenic | 30.0% | |
| TGCTAAACATGCATTTATGA+CGG | + | chr8_2:3962915-3962934 | Msa1228520:CDS | 30.0% | |
| GCGTTTAAACAATACAAGAT+GGG | + | chr8_2:3962937-3962956 | Msa1228520:CDS | 30.0% | |
| ! | TCAAAAGTATGCTTTCAAGA+TGG | - | chr8_2:3963017-3963036 | None:intergenic | 30.0% |
| TTGTAGTCAACATCATAAGT+TGG | + | chr8_2:3963141-3963160 | Msa1228520:intron | 30.0% | |
| ! | GAGCCTTTATCTTTTTATCT+TGG | - | chr8_2:3963204-3963223 | None:intergenic | 30.0% |
| ! | AGATTTTCCTGATAACTGTA+GGG | - | chr8_2:3963247-3963266 | None:intergenic | 30.0% |
| ! | AAGATTTTCCTGATAACTGT+AGG | - | chr8_2:3963248-3963267 | None:intergenic | 30.0% |
| ! | ACAACCAGCATAATTGTTTT+GGG | - | chr8_2:3963281-3963300 | None:intergenic | 30.0% |
| CATAACGACTCTAATTATAC+AGG | - | chr8_2:3963428-3963447 | None:intergenic | 30.0% | |
| GATAACAATTGAACGAGTTT+AGG | - | chr8_2:3963516-3963535 | None:intergenic | 30.0% | |
| ! | AATGATTATGTCTTTTCCTG+TGG | + | chr8_2:3963633-3963652 | Msa1228520:intron | 30.0% |
| ! | CAGAATATCTAAAATACCAC+AGG | - | chr8_2:3963652-3963671 | None:intergenic | 30.0% |
| !! | CTGTGGTATTTTAGATATTC+TGG | + | chr8_2:3963650-3963669 | Msa1228520:intron | 30.0% |
| ! | AATGATTATGTCTTTTCCTG+TGG | + | chr8_2:3963633-3963652 | Msa1228520:intron | 30.0% |
| !! | CATTAGTGTGATTTGTTTGT+AGG | + | chr8_2:3963794-3963813 | Msa1228520:intron | 30.0% |
| TTTAATGCAGATTGATCCTA+AGG | + | chr8_2:3964256-3964275 | Msa1228520:intron | 30.0% | |
| ! | AGTACTCTTCTGGAAAATAT+CGG | - | chr8_2:3964291-3964310 | None:intergenic | 30.0% |
| GAACATATATAGTACTCTTC+TGG | - | chr8_2:3964301-3964320 | None:intergenic | 30.0% | |
| ! | CGCATACAAGTATTTTATCT+AGG | + | chr8_2:3964405-3964424 | Msa1228520:intron | 30.0% |
| ! | AAGTATTTTATCTAGGCGAT+GGG | + | chr8_2:3964412-3964431 | Msa1228520:intron | 30.0% |
| CTAATGCTCATTTAGTTGAT+TGG | + | chr8_2:3964565-3964584 | Msa1228520:intron | 30.0% | |
| !!! | ACAGAACATGTCTTGTTTTT+TGG | - | chr8_2:3964764-3964783 | None:intergenic | 30.0% |
| ! | AATACTTCACCTTTTTGTCA+TGG | + | chr8_2:3964804-3964823 | Msa1228520:intron | 30.0% |
| GGGTAAAAACGATGAAAAAT+GGG | - | chr8_2:3964877-3964896 | None:intergenic | 30.0% | |
| ACTACAGTACATAATCGTTT+AGG | - | chr8_2:3965106-3965125 | None:intergenic | 30.0% | |
| GATGAGGTTAATATGACAAT+TGG | - | chr8_2:3965217-3965236 | None:intergenic | 30.0% | |
| !! | ATGCCTATAGTTGATAGAAT+GGG | + | chr8_2:3965313-3965332 | Msa1228520:intron | 30.0% |
| AAACCCATTCTATCAACTAT+AGG | - | chr8_2:3965319-3965338 | None:intergenic | 30.0% | |
| !!! | TTCACATATTTTGGTGAAAG+GGG | - | chr8_2:3965382-3965401 | None:intergenic | 30.0% |
| TGGATGAAAAAAGTAATCCA+CGG | - | chr8_2:3965420-3965439 | None:intergenic | 30.0% | |
| AAACTATAACCATCAGTATC+AGG | - | chr8_2:3965856-3965875 | None:intergenic | 30.0% | |
| AAGATAAAATTGGAGCAAGA+AGG | + | chr8_2:3966417-3966436 | Msa1228520:intron | 30.0% | |
| TTTGTAGCAACTCATTAGTT+TGG | - | chr8_2:3966493-3966512 | None:intergenic | 30.0% | |
| AGAACCCATCAATATATACT+TGG | + | chr8_2:3966533-3966552 | Msa1228520:intron | 30.0% | |
| ! | TATTGATAAAGCGTTATGTC+GGG | + | chr8_2:3966915-3966934 | Msa1228520:CDS | 30.0% |
| TAGTAAGCTTAAGTCTTACA+TGG | + | chr8_2:3967001-3967020 | Msa1228520:intron | 30.0% | |
| ATGAAATTGTTGTATGTGAC+CGG | + | chr8_2:3967107-3967126 | Msa1228520:intron | 30.0% | |
| GAAAACTTCTGTATAACTCT+AGG | + | chr8_2:3967175-3967194 | Msa1228520:intron | 30.0% | |
| AAAGGGATCAAAGTTAACTT+TGG | - | chr8_2:3967207-3967226 | None:intergenic | 30.0% | |
| CATCTATAACCAAGGTAAAA+AGG | - | chr8_2:3967225-3967244 | None:intergenic | 30.0% | |
| AATAAGCACATCTATAACCA+AGG | - | chr8_2:3967233-3967252 | None:intergenic | 30.0% | |
| GTGCTTATTGAACAAATACA+TGG | + | chr8_2:3967244-3967263 | Msa1228520:intron | 30.0% | |
| AAAATTATTTATCCAGCACG+TGG | - | chr8_2:3967597-3967616 | None:intergenic | 30.0% | |
| ! | TTTCTAACTGATTCTAGTGA+CGG | + | chr8_2:3967614-3967633 | Msa1228520:CDS | 30.0% |
| ACATAATTCATTCTGCAGAA+AGG | - | chr8_2:3967687-3967706 | None:intergenic | 30.0% | |
| TATGTAACTAGCAGAATATG+TGG | - | chr8_2:3967765-3967784 | None:intergenic | 30.0% | |
| ATTCTGCTAGTTACATACTT+TGG | + | chr8_2:3967768-3967787 | Msa1228520:CDS | 30.0% | |
| TTACATACTTTGGTTGAAAG+TGG | + | chr8_2:3967778-3967797 | Msa1228520:CDS | 30.0% | |
| TGTAGATTTGAAGACCTTAT+TGG | + | chr8_2:3967934-3967953 | Msa1228520:CDS | 30.0% | |
| CCCAAGTTTCTCTTATAAAT+AGG | + | chr8_2:3968221-3968240 | Msa1228520:intron | 30.0% | |
| GTTTCTCTTATAAATAGGAC+CGG | + | chr8_2:3968226-3968245 | Msa1228520:intron | 30.0% | |
| AAAAACTTATATACTCCCTC+CGG | - | chr8_2:3968248-3968267 | None:intergenic | 30.0% | |
| TGTAAGTTGTAGCACAAAAT+AGG | + | chr8_2:3968357-3968376 | Msa1228520:three_prime_UTR | 30.0% | |
| TTGAACGAACAGTAACACAA+TGG | + | chr8_2:3960371-3960390 | Msa1228520:five_prime_UTR | 35.0% | |
| ! | GAACAGTAACACAATGGTTT+TGG | + | chr8_2:3960377-3960396 | Msa1228520:five_prime_UTR | 35.0% |
| TATCCTACAGAAGGAAGAAT+TGG | - | chr8_2:3960575-3960594 | None:intergenic | 35.0% | |
| ACTTTACACTATCCTACAGA+AGG | - | chr8_2:3960584-3960603 | None:intergenic | 35.0% | |
| CTGTAGGATAGTGTAAAGTT+TGG | + | chr8_2:3960585-3960604 | Msa1228520:intron | 35.0% | |
| AAATGATGATTTGAGCTTCC+GGG | + | chr8_2:3960711-3960730 | Msa1228520:intron | 35.0% | |
| ! | AAAATGGGGTTTGTTTGGAT+TGG | + | chr8_2:3960829-3960848 | Msa1228520:intron | 35.0% |
| TTGAGTTTATCTGCTAGCAT+AGG | + | chr8_2:3960857-3960876 | Msa1228520:intron | 35.0% | |
| TGAGTATAAGTAACGTGGTT+TGG | + | chr8_2:3961019-3961038 | Msa1228520:intron | 35.0% | |
| ACTAATCAAAGCATACGGAA+TGG | - | chr8_2:3961088-3961107 | None:intergenic | 35.0% | |
| TTCCGTATGCTTTGATTAGT+TGG | + | chr8_2:3961088-3961107 | Msa1228520:intron | 35.0% | |
| GTACATATTACATGAGGGTA+TGG | - | chr8_2:3961249-3961268 | None:intergenic | 35.0% | |
| ATTGTTCTAATAGGATGTGC+TGG | + | chr8_2:3961454-3961473 | Msa1228520:intron | 35.0% | |
| CATTCCATATCAACATAGTG+TGG | + | chr8_2:3961848-3961867 | Msa1228520:intron | 35.0% | |
| TTCCATATCAACATAGTGTG+GGG | + | chr8_2:3961850-3961869 | Msa1228520:intron | 35.0% | |
| GTAATATGTTGCTACACACA+TGG | + | chr8_2:3961910-3961929 | Msa1228520:intron | 35.0% | |
| TACACACATGGTATTCTCTT+AGG | + | chr8_2:3961922-3961941 | Msa1228520:intron | 35.0% | |
| ATATGTTGATCCAACACACT+TGG | - | chr8_2:3962226-3962245 | None:intergenic | 35.0% | |
| GAACGAATTGATTGCTAAGA+GGG | - | chr8_2:3962600-3962619 | None:intergenic | 35.0% | |
| TGAACGAATTGATTGCTAAG+AGG | - | chr8_2:3962601-3962620 | None:intergenic | 35.0% | |
| TCTTAGCAATCAATTCGTTC+AGG | + | chr8_2:3962600-3962619 | Msa1228520:intron | 35.0% | |
| ! | CACGTTTTCCCTTATTCTTT+TGG | + | chr8_2:3962676-3962695 | Msa1228520:intron | 35.0% |
| CACTGGATCCAAAAGAATAA+GGG | - | chr8_2:3962687-3962706 | None:intergenic | 35.0% | |
| TCACTGGATCCAAAAGAATA+AGG | - | chr8_2:3962688-3962707 | None:intergenic | 35.0% | |
| GGCGTTTAAACAATACAAGA+TGG | + | chr8_2:3962936-3962955 | Msa1228520:CDS | 35.0% | |
| TATGCTTTCAAGATGGTCAT+GGG | - | chr8_2:3963010-3963029 | None:intergenic | 35.0% | |
| ! | AAAGGCTCATAGTTGATTCT+TGG | + | chr8_2:3963216-3963235 | Msa1228520:intron | 35.0% |
| TTCTCCCAAAACAATTATGC+TGG | + | chr8_2:3963274-3963293 | Msa1228520:intron | 35.0% | |
| ! | CACAACCAGCATAATTGTTT+TGG | - | chr8_2:3963282-3963301 | None:intergenic | 35.0% |
| ! | CAAAACAATTATGCTGGTTG+TGG | + | chr8_2:3963280-3963299 | Msa1228520:intron | 35.0% |
| ! | ATGTCATAGGTTTTCTGCTA+GGG | - | chr8_2:3963333-3963352 | None:intergenic | 35.0% |
| TAGCAGAAAACCTATGACAT+GGG | + | chr8_2:3963333-3963352 | Msa1228520:intron | 35.0% | |
| AACAATTGAACGAGTTTAGG+AGG | - | chr8_2:3963513-3963532 | None:intergenic | 35.0% | |
| !! | TCTGGATTAGTTCGTAAAAG+CGG | + | chr8_2:3963600-3963619 | Msa1228520:intron | 35.0% |
| !! | TCTGGATTAGTTCGTAAAAG+CGG | + | chr8_2:3963600-3963619 | Msa1228520:intron | 35.0% |
| GGCAAGAAAACATACGAAAA+TGG | + | chr8_2:3963945-3963964 | Msa1228520:intron | 35.0% | |
| TTTCTGCAATATGCACAAAC+AGG | - | chr8_2:3964013-3964032 | None:intergenic | 35.0% | |
| ATTAGTGTCTAAGAAGAAGC+AGG | + | chr8_2:3964036-3964055 | Msa1228520:CDS | 35.0% | |
| ! | ATATCGGTGTTCAAAACCTT+AGG | - | chr8_2:3964275-3964294 | None:intergenic | 35.0% |
| !! | TTTAGTACCGATTGATCTGA+AGG | + | chr8_2:3964357-3964376 | Msa1228520:intron | 35.0% |
| !!! | GAAGGTTTTGGGACATTAAT+AGG | + | chr8_2:3964375-3964394 | Msa1228520:intron | 35.0% |
| ! | CAAGTATTTTATCTAGGCGA+TGG | + | chr8_2:3964411-3964430 | Msa1228520:intron | 35.0% |
| TCTGAACTGAATTTAGACCT+CGG | - | chr8_2:3964516-3964535 | None:intergenic | 35.0% | |
| GTAACAATTATCCTTCGCTT+GGG | - | chr8_2:3964599-3964618 | None:intergenic | 35.0% | |
| AGTAACAATTATCCTTCGCT+TGG | - | chr8_2:3964600-3964619 | None:intergenic | 35.0% | |
| ACAAAACGTTATCTCACTGA+AGG | + | chr8_2:3964723-3964742 | Msa1228520:intron | 35.0% | |
| CAAAACGTTATCTCACTGAA+GGG | + | chr8_2:3964724-3964743 | Msa1228520:intron | 35.0% | |
| ACTGAAGGGAAAAAGATAGA+GGG | + | chr8_2:3964738-3964757 | Msa1228520:intron | 35.0% | |
| ! | ACCTTTTTGTCATGGAGATT+AGG | + | chr8_2:3964812-3964831 | Msa1228520:intron | 35.0% |
| TCCTAATCTCCATGACAAAA+AGG | - | chr8_2:3964816-3964835 | None:intergenic | 35.0% | |
| ! | GTGTTTAGCTCAAAATATGC+TGG | - | chr8_2:3964855-3964874 | None:intergenic | 35.0% |
| GGGGTAAAAACGATGAAAAA+TGG | - | chr8_2:3964878-3964897 | None:intergenic | 35.0% | |
| CAAAGATGAATTATCGTGCT+TGG | + | chr8_2:3964914-3964933 | Msa1228520:CDS | 35.0% | |
| CTCATACATGACTAAAGAAC+AGG | + | chr8_2:3964957-3964976 | Msa1228520:CDS | 35.0% | |
| GCAAGTATGTATCACAATTC+TGG | + | chr8_2:3965007-3965026 | Msa1228520:intron | 35.0% | |
| ATTTCGTGACTTATTGCTAG+TGG | - | chr8_2:3965061-3965080 | None:intergenic | 35.0% | |
| TTGTGTTCTTGTGTAGTTGT+TGG | + | chr8_2:3965172-3965191 | Msa1228520:intron | 35.0% | |
| ! | TGTTGGTTAACCTTAGTTGT+TGG | + | chr8_2:3965189-3965208 | Msa1228520:intron | 35.0% |
| !! | CATGCCTATAGTTGATAGAA+TGG | + | chr8_2:3965312-3965331 | Msa1228520:intron | 35.0% |
| ATGAAAAAAGTAATCCACGG+GGG | - | chr8_2:3965417-3965436 | None:intergenic | 35.0% | |
| GATGAAAAAAGTAATCCACG+GGG | - | chr8_2:3965418-3965437 | None:intergenic | 35.0% | |
| GGATGAAAAAAGTAATCCAC+GGG | - | chr8_2:3965419-3965438 | None:intergenic | 35.0% | |
| TTCATCCAAAATCTCTGTTG+AGG | + | chr8_2:3965432-3965451 | Msa1228520:intron | 35.0% | |
| ! | TTTGACCTCAACAGAGATTT+TGG | - | chr8_2:3965440-3965459 | None:intergenic | 35.0% |
| AGTTGAAGAAATCCAGAAGT+TGG | + | chr8_2:3965760-3965779 | Msa1228520:CDS | 35.0% | |
| GTTGAAGAAATCCAGAAGTT+GGG | + | chr8_2:3965761-3965780 | Msa1228520:CDS | 35.0% | |
| TTGTTTGAACCTGATACTGA+TGG | + | chr8_2:3965844-3965863 | Msa1228520:intron | 35.0% | |
| GTTACTGCAGAAAATTATGG+AGG | + | chr8_2:3965980-3965999 | Msa1228520:CDS | 35.0% | |
| TTATATTGTCCAAGCAGTGA+AGG | + | chr8_2:3966046-3966065 | Msa1228520:CDS | 35.0% | |
| CTATTATTACCTTCACTGCT+TGG | - | chr8_2:3966058-3966077 | None:intergenic | 35.0% | |
| ATCAAAGGTCCTTCAATCTT+AGG | - | chr8_2:3966150-3966169 | None:intergenic | 35.0% | |
| !! | ATTGTGCTGAATTTTCTAGC+AGG | - | chr8_2:3966254-3966273 | None:intergenic | 35.0% |
| CCAGCCAAGTATATATTGAT+GGG | - | chr8_2:3966540-3966559 | None:intergenic | 35.0% | |
| TCCAGCCAAGTATATATTGA+TGG | - | chr8_2:3966541-3966560 | None:intergenic | 35.0% | |
| ACTAGTAAAGCTATACAAGG+TGG | - | chr8_2:3966825-3966844 | None:intergenic | 35.0% | |
| ! | TGTGACAGTTATGATTTGTC+AGG | + | chr8_2:3966871-3966890 | Msa1228520:intron | 35.0% |
| AGCTTAAGTCTTACATGGAT+CGG | + | chr8_2:3967006-3967025 | Msa1228520:intron | 35.0% | |
| ! | ACTTTGATCCCTTTTTACCT+TGG | + | chr8_2:3967213-3967232 | Msa1228520:intron | 35.0% |
| ATGCATATCTAGGAAACACA+CGG | + | chr8_2:3967339-3967358 | Msa1228520:intron | 35.0% | |
| !! | ATGTAAATGTGGCTTTGGTA+GGG | - | chr8_2:3967468-3967487 | None:intergenic | 35.0% |
| !! | AATGTAAATGTGGCTTTGGT+AGG | - | chr8_2:3967469-3967488 | None:intergenic | 35.0% |
| !! | TTCGTTTTAAACAGGCTCTA+TGG | + | chr8_2:3967552-3967571 | Msa1228520:intron | 35.0% |
| !! | ACTTTTGCTGATGACGATTA+TGG | + | chr8_2:3967722-3967741 | Msa1228520:CDS | 35.0% |
| !! | CTTTTGCTGATGACGATTAT+GGG | + | chr8_2:3967723-3967742 | Msa1228520:CDS | 35.0% |
| !! | TTTTGCTGATGACGATTATG+GGG | + | chr8_2:3967724-3967743 | Msa1228520:CDS | 35.0% |
| GTCTCAAAATGGAAAGTCTA+GGG | - | chr8_2:3967820-3967839 | None:intergenic | 35.0% | |
| AGTCTCAAAATGGAAAGTCT+AGG | - | chr8_2:3967821-3967840 | None:intergenic | 35.0% | |
| CTAGATAAGCAGTCTCAAAA+TGG | - | chr8_2:3967831-3967850 | None:intergenic | 35.0% | |
| CTACATCTCTTATCTTCTCA+AGG | - | chr8_2:3967919-3967938 | None:intergenic | 35.0% | |
| TATTTGCACAAATCACTCGT+CGG | - | chr8_2:3968328-3968347 | None:intergenic | 35.0% | |
| ! | GTGCTTTTCACACATAACAT+TGG | - | chr8_2:3968431-3968450 | None:intergenic | 35.0% |
| ATGCCAATTCTTCCTTCTGT+AGG | + | chr8_2:3960569-3960588 | Msa1228520:intron | 40.0% | |
| !! | TAGTCATACAAGGTACTGTC+AGG | - | chr8_2:3960759-3960778 | None:intergenic | 40.0% |
| TGACAGTACCTTGTATGACT+AGG | + | chr8_2:3960758-3960777 | Msa1228520:intron | 40.0% | |
| ! | ATCGGAAAATGGGGTTTGTT+TGG | + | chr8_2:3960824-3960843 | Msa1228520:intron | 40.0% |
| TAGGCAATTGTGAGGATGTT+TGG | + | chr8_2:3960876-3960895 | Msa1228520:intron | 40.0% | |
| !! | AATGTTGACTCACTTCCACA+TGG | + | chr8_2:3961296-3961315 | Msa1228520:intron | 40.0% |
| GGTAAGTACATATCTCCATG+TGG | - | chr8_2:3961314-3961333 | None:intergenic | 40.0% | |
| GAGTCTGATGCTCTAATGTA+AGG | + | chr8_2:3961722-3961741 | Msa1228520:intron | 40.0% | |
| ! | TTTGTGGGTTTTGCGACATT+TGG | + | chr8_2:3961802-3961821 | Msa1228520:intron | 40.0% |
| GCTCCGTTTAAGAGTTTCAA+GGG | + | chr8_2:3961944-3961963 | Msa1228520:intron | 40.0% | |
| CTCCGTTTAAGAGTTTCAAG+GGG | + | chr8_2:3961945-3961964 | Msa1228520:intron | 40.0% | |
| TCCGTTTAAGAGTTTCAAGG+GGG | + | chr8_2:3961946-3961965 | Msa1228520:intron | 40.0% | |
| TCCCCCTTGAAACTCTTAAA+CGG | - | chr8_2:3961950-3961969 | None:intergenic | 40.0% | |
| TCTGTTTGTGAGTCTAGAAG+GGG | - | chr8_2:3962132-3962151 | None:intergenic | 40.0% | |
| CTCTGTTTGTGAGTCTAGAA+GGG | - | chr8_2:3962133-3962152 | None:intergenic | 40.0% | |
| !! | CGTTTTGAGCAAATGTGCTA+AGG | + | chr8_2:3962314-3962333 | Msa1228520:intron | 40.0% |
| ! | CTCTAAGAAGTCTCAAGAGT+AGG | + | chr8_2:3962528-3962547 | Msa1228520:intron | 40.0% |
| GTATGCTTTCAAGATGGTCA+TGG | - | chr8_2:3963011-3963030 | None:intergenic | 40.0% | |
| TTATGACTGCTTGGAATTGC+AGG | + | chr8_2:3963073-3963092 | Msa1228520:CDS | 40.0% | |
| TTTCCTGATAACTGTAGGGA+TGG | - | chr8_2:3963243-3963262 | None:intergenic | 40.0% | |
| ! | CATGTCATAGGTTTTCTGCT+AGG | - | chr8_2:3963334-3963353 | None:intergenic | 40.0% |
| CTAGCAGAAAACCTATGACA+TGG | + | chr8_2:3963332-3963351 | Msa1228520:intron | 40.0% | |
| ACACAAGAAACCCATGTCAT+AGG | - | chr8_2:3963346-3963365 | None:intergenic | 40.0% | |
| !!! | AATCACAGTTTTGACTCCAC+AGG | - | chr8_2:3963720-3963739 | None:intergenic | 40.0% |
| !! | CTCCAAGCTTGTTCACTTTT+GGG | - | chr8_2:3964115-3964134 | None:intergenic | 40.0% |
| !! | ACTCCAAGCTTGTTCACTTT+TGG | - | chr8_2:3964116-3964135 | None:intergenic | 40.0% |
| TATGTAGCAGTTTCCCCTTA+TGG | + | chr8_2:3964147-3964166 | Msa1228520:intron | 40.0% | |
| ! | TTTGTGATGGGAAGCCATAA+GGG | - | chr8_2:3964164-3964183 | None:intergenic | 40.0% |
| !! | TTTTGTGATGGGAAGCCATA+AGG | - | chr8_2:3964165-3964184 | None:intergenic | 40.0% |
| TTATGGCTTCCCATCACAAA+AGG | + | chr8_2:3964164-3964183 | Msa1228520:intron | 40.0% | |
| ! | ACCGATTGATCTGAAGGTTT+TGG | + | chr8_2:3964363-3964382 | Msa1228520:intron | 40.0% |
| CCCAAAACCTTCAGATCAAT+CGG | - | chr8_2:3964367-3964386 | None:intergenic | 40.0% | |
| ! | CCGATTGATCTGAAGGTTTT+GGG | + | chr8_2:3964364-3964383 | Msa1228520:intron | 40.0% |
| CACTGAAGGGAAAAAGATAG+AGG | + | chr8_2:3964737-3964756 | Msa1228520:intron | 40.0% | |
| ! | TGTATGAGATTAGCCAGCAA+CGG | - | chr8_2:3964945-3964964 | None:intergenic | 40.0% |
| ! | ACAATTGGCTCCAACAACTA+AGG | - | chr8_2:3965202-3965221 | None:intergenic | 40.0% |
| !! | CCAAAAATGGGCTAATGATG+AGG | - | chr8_2:3965233-3965252 | None:intergenic | 40.0% |
| ! | CCTCATCATTAGCCCATTTT+TGG | + | chr8_2:3965230-3965249 | Msa1228520:intron | 40.0% |
| ATATATTCCCGTTCCCTGTT+TGG | + | chr8_2:3965265-3965284 | Msa1228520:intron | 40.0% | |
| TCAAAGGACCTTACCAAACA+GGG | - | chr8_2:3965281-3965300 | None:intergenic | 40.0% | |
| TTCAAAGGACCTTACCAAAC+AGG | - | chr8_2:3965282-3965301 | None:intergenic | 40.0% | |
| GCATGCTCATACTCATTCAA+AGG | - | chr8_2:3965297-3965316 | None:intergenic | 40.0% | |
| !!! | TATTTTGGTGAAAGGGGAAG+TGG | - | chr8_2:3965376-3965395 | None:intergenic | 40.0% |
| TCAGTCCAACACAATGTTGT+CGG | - | chr8_2:3965479-3965498 | None:intergenic | 40.0% | |
| TAGCGTACATCATATTGCAG+CGG | + | chr8_2:3965958-3965977 | Msa1228520:intron | 40.0% | |
| GCGGTTACTGCAGAAAATTA+TGG | + | chr8_2:3965977-3965996 | Msa1228520:intron | 40.0% | |
| CAGATTCTTCCGCATTACTT+CGG | - | chr8_2:3966007-3966026 | None:intergenic | 40.0% | |
| ! | TCTGAAGTGCCTAAGATTGA+AGG | + | chr8_2:3966138-3966157 | Msa1228520:intron | 40.0% |
| CCCATCAATATATACTTGGC+TGG | + | chr8_2:3966537-3966556 | Msa1228520:intron | 40.0% | |
| AGCAGTAATTCAGCCTCATA+GGG | - | chr8_2:3966577-3966596 | None:intergenic | 40.0% | |
| TAGCAGTAATTCAGCCTCAT+AGG | - | chr8_2:3966578-3966597 | None:intergenic | 40.0% | |
| AAGTGCGATAAGTAGTGCAT+TGG | - | chr8_2:3966716-3966735 | None:intergenic | 40.0% | |
| TCCTTCACAGGAACTTTGAA+AGG | + | chr8_2:3966748-3966767 | Msa1228520:intron | 40.0% | |
| ! | CCTTCACAGGAACTTTGAAA+GGG | + | chr8_2:3966749-3966768 | Msa1228520:intron | 40.0% |
| ! | TGAACAAATACATGGTGCCA+TGG | + | chr8_2:3967252-3967271 | Msa1228520:intron | 40.0% |
| !! | TGGCTTTGGTAGGGTTATTA+TGG | - | chr8_2:3967459-3967478 | None:intergenic | 40.0% |
| GCTAGCATGTTTCATGACTT+TGG | + | chr8_2:3967659-3967678 | Msa1228520:CDS | 40.0% | |
| AGTTCATTTCCAAGAGGCTT+GGG | - | chr8_2:3967896-3967915 | None:intergenic | 40.0% | |
| TCAAGGAGTTCATTTCCAAG+AGG | - | chr8_2:3967902-3967921 | None:intergenic | 40.0% | |
| AGGGCATGACTTATCCAATA+AGG | - | chr8_2:3967951-3967970 | None:intergenic | 40.0% | |
| AGTTCCCATATCTCAAGTCA+AGG | + | chr8_2:3968022-3968041 | Msa1228520:three_prime_UTR | 40.0% | |
| ! | TGCTCCTTGACTTGAGATAT+GGG | - | chr8_2:3968029-3968048 | None:intergenic | 40.0% |
| TTGATATCTTGTACTCCCTC+CGG | + | chr8_2:3968115-3968134 | Msa1228520:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | chr8_2:3968230-3968249 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr8_2:3968229-3968248 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | + | chr8_2:3968229-3968248 | Msa1228520:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | + | chr8_2:3968230-3968249 | Msa1228520:intron | 40.0% | |
| GTGTTGCCCAAAAATTTGCA+AGG | - | chr8_2:3968271-3968290 | None:intergenic | 40.0% | |
| TGCTAGCATAGGCAATTGTG+AGG | + | chr8_2:3960868-3960887 | Msa1228520:intron | 45.0% | |
| !! | CTTCACACTAAGGCACTGTT+TGG | - | chr8_2:3961193-3961212 | None:intergenic | 45.0% |
| CAAACAGTGCCTTAGTGTGA+AGG | + | chr8_2:3961191-3961210 | Msa1228520:intron | 45.0% | |
| AAGCCAACTCCTTCACACTA+AGG | - | chr8_2:3961203-3961222 | None:intergenic | 45.0% | |
| GACCCCACACTATGTTGATA+TGG | - | chr8_2:3961855-3961874 | None:intergenic | 45.0% | |
| GGCTCCGTTTAAGAGTTTCA+AGG | + | chr8_2:3961943-3961962 | Msa1228520:intron | 45.0% | |
| TTTGTGAGTCTAGAAGGGGA+GGG | - | chr8_2:3962128-3962147 | None:intergenic | 45.0% | |
| GCTCTGTTTGTGAGTCTAGA+AGG | - | chr8_2:3962134-3962153 | None:intergenic | 45.0% | |
| GTTAGAAAGGCCAAGTGTGT+TGG | + | chr8_2:3962213-3962232 | Msa1228520:intron | 45.0% | |
| AGCAAGAAAAGAAGGCCACA+TGG | - | chr8_2:3962415-3962434 | None:intergenic | 45.0% | |
| !! | GGGTGTTATTCTAACAGTCC+AGG | - | chr8_2:3962580-3962599 | None:intergenic | 45.0% |
| ! | TTTTGGATCCAGTGATGAGC+TGG | + | chr8_2:3962693-3962712 | Msa1228520:intron | 45.0% |
| TTTGGATCCAGTGATGAGCT+GGG | + | chr8_2:3962694-3962713 | Msa1228520:intron | 45.0% | |
| AATAAACCCCAGCTCATCAC+TGG | - | chr8_2:3962704-3962723 | None:intergenic | 45.0% | |
| ! | CTGTTTGCTGATTGATGGAC+GGG | - | chr8_2:3962790-3962809 | None:intergenic | 45.0% |
| ! | CCTGTTTGCTGATTGATGGA+CGG | - | chr8_2:3962791-3962810 | None:intergenic | 45.0% |
| CGTCCATCAATCAGCAAACA+GGG | + | chr8_2:3962789-3962808 | Msa1228520:CDS | 45.0% | |
| AGATGGTCATGGGATACTGA+AGG | - | chr8_2:3963000-3963019 | None:intergenic | 45.0% | |
| !!! | GCATACTTTTGAGACACAGC+AGG | + | chr8_2:3963025-3963044 | Msa1228520:CDS | 45.0% |
| GCTGTGACTTTATGACTGCT+TGG | + | chr8_2:3963064-3963083 | Msa1228520:CDS | 45.0% | |
| TCTGCTAGGGAGGTTAACTA+CGG | - | chr8_2:3963320-3963339 | None:intergenic | 45.0% | |
| ! | TCATAGGTTTTCTGCTAGGG+AGG | - | chr8_2:3963330-3963349 | None:intergenic | 45.0% |
| ATTGAGGTACGGAAAGAGCT+AGG | - | chr8_2:3963553-3963572 | None:intergenic | 45.0% | |
| CACCCAAAAGTGAACAAGCT+TGG | + | chr8_2:3964110-3964129 | Msa1228520:CDS | 45.0% | |
| GTGAACAAGCTTGGAGTCAT+AGG | + | chr8_2:3964119-3964138 | Msa1228520:CDS | 45.0% | |
| ! | TTGTGATGGGAAGCCATAAG+GGG | - | chr8_2:3964163-3964182 | None:intergenic | 45.0% |
| GCTTGTGGAAAAAATAGCCG+AGG | + | chr8_2:3964496-3964515 | Msa1228520:CDS | 45.0% | |
| ! | TGGTTTTCTTACCCAAGCGA+AGG | + | chr8_2:3964585-3964604 | Msa1228520:intron | 45.0% |
| AAAAAATAGTTCAGCCCCCG+TGG | + | chr8_2:3965400-3965419 | Msa1228520:intron | 45.0% | |
| TATGCCCGACAACATTGTGT+TGG | + | chr8_2:3965471-3965490 | Msa1228520:intron | 45.0% | |
| CAGTCCAACACAATGTTGTC+GGG | - | chr8_2:3965478-3965497 | None:intergenic | 45.0% | |
| AACATTGTGTTGGACTGACC+TGG | + | chr8_2:3965481-3965500 | Msa1228520:intron | 45.0% | |
| ACATTGTGTTGGACTGACCT+GGG | + | chr8_2:3965482-3965501 | Msa1228520:intron | 45.0% | |
| CGAAAGTTACTGGTCAGGTA+CGG | - | chr8_2:3965513-3965532 | None:intergenic | 45.0% | |
| CGTACCTGACCAGTAACTTT+CGG | + | chr8_2:3965511-3965530 | Msa1228520:intron | 45.0% | |
| TTTGGCTGACCGAAAGTTAC+TGG | - | chr8_2:3965523-3965542 | None:intergenic | 45.0% | |
| TATGGAGGACCGAAGTAATG+CGG | + | chr8_2:3965995-3966014 | Msa1228520:CDS | 45.0% | |
| GCGGAAGAATCTGCATCTTA+TGG | + | chr8_2:3966014-3966033 | Msa1228520:CDS | 45.0% | |
| !! | GTGCTGAATTTTCTAGCAGG+AGG | - | chr8_2:3966251-3966270 | None:intergenic | 45.0% |
| TGAGGCTGAATTACTGCTAC+TGG | + | chr8_2:3966579-3966598 | Msa1228520:intron | 45.0% | |
| CTTGATCGTTGGAGTATGTG+TGG | + | chr8_2:3966658-3966677 | Msa1228520:intron | 45.0% | |
| ATCGTTGGAGTATGTGTGGA+AGG | + | chr8_2:3966662-3966681 | Msa1228520:intron | 45.0% | |
| TGGAGTATGTGTGGAAGGTT+TGG | + | chr8_2:3966667-3966686 | Msa1228520:intron | 45.0% | |
| GTATCACACGTTTCCTTCAC+AGG | + | chr8_2:3966736-3966755 | Msa1228520:intron | 45.0% | |
| CCCTTTCAAAGTTCCTGTGA+AGG | - | chr8_2:3966752-3966771 | None:intergenic | 45.0% | |
| TTTGTCAGGACGAACTCGAT+TGG | + | chr8_2:3966885-3966904 | Msa1228520:intron | 45.0% | |
| TAAGTCTTACATGGATCGGC+TGG | + | chr8_2:3967010-3967029 | Msa1228520:intron | 45.0% | |
| !! | ACAAATACATGGTGCCATGG+TGG | + | chr8_2:3967255-3967274 | Msa1228520:intron | 45.0% |
| !! | TCTGCAAAAAGCATCCACCA+TGG | - | chr8_2:3967272-3967291 | None:intergenic | 45.0% |
| CACACGGTTTCTGCCTAATT+AGG | + | chr8_2:3967355-3967374 | Msa1228520:intron | 45.0% | |
| AAACGCACAAACAACAGCGT+AGG | + | chr8_2:3967414-3967433 | Msa1228520:intron | 45.0% | |
| ! | AAACATGCTAGCTTCCTCCT+TGG | - | chr8_2:3967651-3967670 | None:intergenic | 45.0% |
| ATCGTCATCAGCAAAAGTCG+AGG | - | chr8_2:3967720-3967739 | None:intergenic | 45.0% | |
| ! | CAGAATATGTGGCTTGTGCT+TGG | - | chr8_2:3967754-3967773 | None:intergenic | 45.0% |
| GAGTTCATTTCCAAGAGGCT+TGG | - | chr8_2:3967897-3967916 | None:intergenic | 45.0% | |
| ! | CTGCTCCTTGACTTGAGATA+TGG | - | chr8_2:3968030-3968049 | None:intergenic | 45.0% |
| CATATCTCAAGTCAAGGAGC+AGG | + | chr8_2:3968028-3968047 | Msa1228520:three_prime_UTR | 45.0% | |
| AAGTCAAGGAGCAGGAGTTT+CGG | + | chr8_2:3968036-3968055 | Msa1228520:three_prime_UTR | 45.0% | |
| !! | AAATTTCTTAATAAAAAATT+GGG | - | chr8_2:3961785-3961804 | None:intergenic | 5.0% |
| !!! | TTAATATTTTTAATACAAAA+TGG | - | chr8_2:3964696-3964715 | None:intergenic | 5.0% |
| !!! | TTTATTTGTAAAATTATTTT+GGG | - | chr8_2:3968293-3968312 | None:intergenic | 5.0% |
| TTTGAGCTTCCGGGTCAACT+CGG | + | chr8_2:3960720-3960739 | Msa1228520:intron | 50.0% | |
| ! | TCATCAAGACCGAGTTGACC+CGG | - | chr8_2:3960732-3960751 | None:intergenic | 50.0% |
| GTGCCTTAGTGTGAAGGAGT+TGG | + | chr8_2:3961197-3961216 | Msa1228520:intron | 50.0% | |
| TTCAAGGGGGAGAGAATGAG+AGG | + | chr8_2:3961959-3961978 | Msa1228520:intron | 50.0% | |
| TCAAGGGGGAGAGAATGAGA+GGG | + | chr8_2:3961960-3961979 | Msa1228520:intron | 50.0% | |
| GGAGAGAATGAGAGGGCTTT+GGG | + | chr8_2:3961967-3961986 | Msa1228520:intron | 50.0% | |
| TTGTGAGTCTAGAAGGGGAG+GGG | - | chr8_2:3962127-3962146 | None:intergenic | 50.0% | |
| GTTTGTGAGTCTAGAAGGGG+AGG | - | chr8_2:3962129-3962148 | None:intergenic | 50.0% | |
| TTGGATCCAGTGATGAGCTG+GGG | + | chr8_2:3962695-3962714 | Msa1228520:intron | 50.0% | |
| CCGTCCATCAATCAGCAAAC+AGG | + | chr8_2:3962788-3962807 | Msa1228520:CDS | 50.0% | |
| ! | CTGCCCTGTTTGCTGATTGA+TGG | - | chr8_2:3962795-3962814 | None:intergenic | 50.0% |
| TGGTCATGGGATACTGAAGG+AGG | - | chr8_2:3962997-3963016 | None:intergenic | 50.0% | |
| GGTCCATCCCTACAGTTATC+AGG | + | chr8_2:3963237-3963256 | Msa1228520:intron | 50.0% | |
| CTAGGGAGGTTAACTACGGA+AGG | - | chr8_2:3963316-3963335 | None:intergenic | 50.0% | |
| GGGGAAAGAATCTGAGCTTG+TGG | + | chr8_2:3964481-3964500 | Msa1228520:CDS | 50.0% | |
| TTCCCGTTCCCTGTTTGGTA+AGG | + | chr8_2:3965270-3965289 | Msa1228520:intron | 50.0% | |
| GACCTTACCAAACAGGGAAC+GGG | - | chr8_2:3965275-3965294 | None:intergenic | 50.0% | |
| GGACCTTACCAAACAGGGAA+CGG | - | chr8_2:3965276-3965295 | None:intergenic | 50.0% | |
| GTGAAAGGGGAAGTGGAATG+TGG | - | chr8_2:3965369-3965388 | None:intergenic | 50.0% | |
| CTGACCGAAAGTTACTGGTC+AGG | - | chr8_2:3965518-3965537 | None:intergenic | 50.0% | |
| GCCAAAATCGAGCTAAGCTG+AGG | + | chr8_2:3965537-3965556 | Msa1228520:intron | 50.0% | |
| ! | GCCTCAGCTTAGCTCGATTT+TGG | - | chr8_2:3965541-3965560 | None:intergenic | 50.0% |
| ! | AAAGCGTTATGTCGGGAGAG+AGG | + | chr8_2:3966922-3966941 | Msa1228520:CDS | 50.0% |
| AGCTTCCTCCTTGGAATGGT+CGG | - | chr8_2:3967642-3967661 | None:intergenic | 50.0% | |
| ! | TGCTAGCTTCCTCCTTGGAA+TGG | - | chr8_2:3967646-3967665 | None:intergenic | 50.0% |
| CAGCAAAAGTCGAGGTGTGA+AGG | - | chr8_2:3967712-3967731 | None:intergenic | 50.0% | |
| TACGGGTCTCTTGCATCAGC+TGG | + | chr8_2:3961688-3961707 | Msa1228520:CDS | 55.0% | |
| GGGAGAGAATGAGAGGGCTT+TGG | + | chr8_2:3961966-3961985 | Msa1228520:intron | 55.0% | |
| !! | GAGAATGAGAGGGCTTTGGG+AGG | + | chr8_2:3961970-3961989 | Msa1228520:intron | 55.0% |
| !! | AATGAGAGGGCTTTGGGAGG+AGG | + | chr8_2:3961973-3961992 | Msa1228520:intron | 55.0% |
| !! | ATGAGAGGGCTTTGGGAGGA+GGG | + | chr8_2:3961974-3961993 | Msa1228520:intron | 55.0% |
| GTGCTTGGAATCACCGTTGC+TGG | + | chr8_2:3964929-3964948 | Msa1228520:CDS | 55.0% | |
| ATGCAGTGCAGCCCAACTTC+TGG | - | chr8_2:3965775-3965794 | None:intergenic | 55.0% | |
| CGTTATGTCGGGAGAGAGGT+AGG | + | chr8_2:3966926-3966945 | Msa1228520:intron | 55.0% | |
| TATGTCGGGAGAGAGGTAGG+TGG | + | chr8_2:3966929-3966948 | Msa1228520:intron | 55.0% | |
| ! | GTCGCTTTCTTTCCACGTGC+TGG | + | chr8_2:3967582-3967601 | Msa1228520:CDS | 55.0% |
| ! | TGACGGATCCGACCATTCCA+AGG | + | chr8_2:3967631-3967650 | Msa1228520:CDS | 55.0% |
| GGGTCTCTTGCATCAGCTGG+AGG | + | chr8_2:3961691-3961710 | Msa1228520:CDS | 60.0% | |
| ! | CTTTGGGAGGAGGGAAGGAG+AGG | + | chr8_2:3961983-3962002 | Msa1228520:intron | 60.0% |
| CGGATCCGACCATTCCAAGG+AGG | + | chr8_2:3967634-3967653 | Msa1228520:CDS | 60.0% | |
| CAGCAAGTGCCCAAGCCTCT+TGG | + | chr8_2:3967884-3967903 | Msa1228520:intron | 60.0% | |
| !! | GAGGGCTTTGGGAGGAGGGA+AGG | + | chr8_2:3961978-3961997 | Msa1228520:intron | 65.0% |
| GGTCAGGTACGGAAGAGCCC+AGG | - | chr8_2:3965502-3965521 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 3960356 | 3968530 | 3960356 | ID=Msa1228520;Name=Msa1228520 |
| chr8_2 | mRNA | 3960356 | 3968530 | 3960356 | ID=Msa1228520-mRNA-1;Parent=Msa1228520;Name=Msa1228520-mRNA-1;_AED=0.25;_eAED=0.25;_QI=133|1|1|1|0.81|0.66|12|387|438 |
| chr8_2 | exon | 3960356 | 3960452 | 3960356 | ID=Msa1228520-mRNA-1:exon:1239;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3961620 | 3961738 | 3961620 | ID=Msa1228520-mRNA-1:exon:1240;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3962705 | 3963094 | 3962705 | ID=Msa1228520-mRNA-1:exon:1241;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3964030 | 3964140 | 3964030 | ID=Msa1228520-mRNA-1:exon:1242;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3964427 | 3964517 | 3964427 | ID=Msa1228520-mRNA-1:exon:1243;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3964910 | 3964978 | 3964910 | ID=Msa1228520-mRNA-1:exon:1244;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3965750 | 3965827 | 3965750 | ID=Msa1228520-mRNA-1:exon:1245;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3965978 | 3966067 | 3965978 | ID=Msa1228520-mRNA-1:exon:1246;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3966893 | 3966943 | 3966893 | ID=Msa1228520-mRNA-1:exon:1247;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3967566 | 3967799 | 3967566 | ID=Msa1228520-mRNA-1:exon:1248;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3967887 | 3968117 | 3967887 | ID=Msa1228520-mRNA-1:exon:1249;Parent=Msa1228520-mRNA-1 |
| chr8_2 | exon | 3968255 | 3968530 | 3968255 | ID=Msa1228520-mRNA-1:exon:1250;Parent=Msa1228520-mRNA-1 |
| chr8_2 | five_prime_UTR | 3960356 | 3960452 | 3960356 | ID=Msa1228520-mRNA-1:five_prime_utr;Parent=Msa1228520-mRNA-1 |
| chr8_2 | five_prime_UTR | 3961620 | 3961655 | 3961620 | ID=Msa1228520-mRNA-1:five_prime_utr;Parent=Msa1228520-mRNA-1 |
| chr8_2 | CDS | 3961656 | 3961738 | 3961656 | ID=Msa1228520-mRNA-1:cds;Parent=Msa1228520-mRNA-1 |
| chr8_2 | CDS | 3962705 | 3963094 | 3962705 | ID=Msa1228520-mRNA-1:cds;Parent=Msa1228520-mRNA-1 |
| chr8_2 | CDS | 3964030 | 3964140 | 3964030 | ID=Msa1228520-mRNA-1:cds;Parent=Msa1228520-mRNA-1 |
| chr8_2 | CDS | 3964427 | 3964517 | 3964427 | ID=Msa1228520-mRNA-1:cds;Parent=Msa1228520-mRNA-1 |
| chr8_2 | CDS | 3964910 | 3964978 | 3964910 | ID=Msa1228520-mRNA-1:cds;Parent=Msa1228520-mRNA-1 |
| chr8_2 | CDS | 3965750 | 3965827 | 3965750 | ID=Msa1228520-mRNA-1:cds;Parent=Msa1228520-mRNA-1 |
| chr8_2 | CDS | 3965978 | 3966067 | 3965978 | ID=Msa1228520-mRNA-1:cds;Parent=Msa1228520-mRNA-1 |
| chr8_2 | CDS | 3966893 | 3966943 | 3966893 | ID=Msa1228520-mRNA-1:cds;Parent=Msa1228520-mRNA-1 |
| chr8_2 | CDS | 3967566 | 3967799 | 3967566 | ID=Msa1228520-mRNA-1:cds;Parent=Msa1228520-mRNA-1 |
| chr8_2 | CDS | 3967887 | 3968006 | 3967887 | ID=Msa1228520-mRNA-1:cds;Parent=Msa1228520-mRNA-1 |
| chr8_2 | three_prime_UTR | 3968007 | 3968117 | 3968007 | ID=Msa1228520-mRNA-1:three_prime_utr;Parent=Msa1228520-mRNA-1 |
| chr8_2 | three_prime_UTR | 3968255 | 3968530 | 3968255 | ID=Msa1228520-mRNA-1:three_prime_utr;Parent=Msa1228520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
