Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1188650 | XP_003628099.1 | 94.211 | 380 | 14 | 1 | 1 | 372 | 1 | 380 | 0.0 | 689 |
| Msa1188650 | XP_003628099.1 | 98.148 | 54 | 1 | 0 | 430 | 483 | 362 | 415 | 1.66e-24 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1188650 | sp|Q9FF75|SUN1_ARATH | 44.810 | 395 | 182 | 11 | 1 | 372 | 1 | 382 | 7.21e-94 | 295 |
| Msa1188650 | sp|Q9FF75|SUN1_ARATH | 70.690 | 58 | 15 | 1 | 430 | 487 | 364 | 419 | 6.00e-17 | 86.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1188650 | G7L6W7 | 94.211 | 380 | 14 | 1 | 1 | 372 | 1 | 380 | 0.0 | 689 |
| Msa1188650 | G7L6W7 | 98.148 | 54 | 1 | 0 | 430 | 483 | 362 | 415 | 7.94e-25 | 117 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0055070 | Msa1188650 | 0.803648 | 3.153179e-49 | -8.615850e-47 |
| Msa0116790 | Msa1188650 | 0.800196 | 1.614345e-48 | -8.615850e-47 |
| Msa0710270 | Msa1188650 | 0.805241 | 1.467715e-49 | -8.615850e-47 |
| Msa0141400 | Msa1188650 | 0.811515 | 6.737369e-51 | -8.615850e-47 |
| Msa0168870 | Msa1188650 | 0.805846 | 1.096036e-49 | -8.615850e-47 |
| Msa0434570 | Msa1188650 | 0.806774 | 6.986051e-50 | -8.615850e-47 |
| Msa0244980 | Msa1188650 | 0.804979 | 1.665185e-49 | -8.615850e-47 |
| Msa0363640 | Msa1188650 | 0.806769 | 7.003194e-50 | -8.615850e-47 |
| Msa1168590 | Msa1188650 | 0.816152 | 6.407375e-52 | -8.615850e-47 |
| Msa1188650 | Msa1370590 | 0.802619 | 5.147788e-49 | -8.615850e-47 |
| Msa1188650 | Msa1384100 | 0.806665 | 7.368447e-50 | -8.615850e-47 |
| Msa1188650 | Msa1410420 | 0.816294 | 5.956978e-52 | -8.615850e-47 |
| Msa1188650 | Msa1418240 | 0.819748 | 9.869149e-53 | -8.615850e-47 |
| Msa1188650 | Msa1444120 | 0.806991 | 6.286831e-50 | -8.615850e-47 |
| Msa1188650 | Msa1454530 | 0.814301 | 1.651768e-51 | -8.615850e-47 |
| Msa0482940 | Msa1188650 | 0.807428 | 5.079911e-50 | -8.615850e-47 |
| Msa0485240 | Msa1188650 | 0.817924 | 2.561874e-52 | -8.615850e-47 |
| Msa0504780 | Msa1188650 | 0.803170 | 3.962010e-49 | -8.615850e-47 |
| Msa0903780 | Msa1188650 | 0.805057 | 1.604021e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1188650 | MtrunA17_Chr8g0355031 | 94.211 | 380 | 14 | 1 | 1 | 372 | 1 | 380 | 0.0 | 689 |
| Msa1188650 | MtrunA17_Chr8g0355031 | 98.148 | 54 | 1 | 0 | 430 | 483 | 362 | 415 | 1.53e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1188650 | AT5G04990.1 | 44.810 | 395 | 182 | 11 | 1 | 372 | 1 | 382 | 7.33e-95 | 295 |
| Msa1188650 | AT5G04990.1 | 70.690 | 58 | 15 | 1 | 430 | 487 | 364 | 419 | 6.09e-18 | 86.7 |
| Msa1188650 | AT3G10730.1 | 43.216 | 398 | 181 | 12 | 1 | 372 | 1 | 379 | 5.23e-81 | 259 |
| Msa1188650 | AT3G10730.1 | 64.151 | 53 | 15 | 1 | 430 | 482 | 361 | 409 | 1.49e-14 | 76.3 |
Find 167 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGTATCAATTACAGAATT+AGG | 0.163898 | 8_1:-29113770 | None:intergenic |
| GTTCCCTGGACTCTTATTTA+TGG | 0.176082 | 8_1:+29112952 | Msa1188650:CDS |
| GGGGTTCTTGTTGCTGTTGC+AGG | 0.185709 | 8_1:+29112854 | Msa1188650:CDS |
| GGATAAATTGGAGAGATATT+TGG | 0.218692 | 8_1:+29109886 | Msa1188650:CDS |
| GATAAAGAAATTGGTGAATA+AGG | 0.220348 | 8_1:+29109862 | Msa1188650:CDS |
| ACTGCGGACCTTAGAATTAA+AGG | 0.235734 | 8_1:+29112682 | Msa1188650:CDS |
| TCTCTAGCTGGGGTTGGTTT+TGG | 0.257523 | 8_1:+29112917 | Msa1188650:CDS |
| GTTGTTGTTGGAGGAGGGTT+TGG | 0.273220 | 8_1:+29109662 | Msa1188650:CDS |
| AAGATGTTGAAACCGAGTTT+TGG | 0.294665 | 8_1:+29110205 | Msa1188650:CDS |
| TGGGTATGAGGGTGGTGGTT+TGG | 0.297317 | 8_1:+29109988 | Msa1188650:CDS |
| GGAGAATGAGATAAAGAAAT+TGG | 0.300242 | 8_1:+29109853 | Msa1188650:CDS |
| CACCAAAAGCCCAAAATTCT+TGG | 0.305160 | 8_1:-29109582 | None:intergenic |
| TTGCCGTCGCCGGCGGTGTT+TGG | 0.306417 | 8_1:-29109374 | None:intergenic |
| CGTTCCTGAGGCTGTTACTT+TGG | 0.306615 | 8_1:+29110297 | Msa1188650:CDS |
| GCAGCGGGTTTGTTCAAATT+AGG | 0.309319 | 8_1:+29110260 | Msa1188650:CDS |
| AGAAGGAGGATTTGAAATAT+TGG | 0.311822 | 8_1:-29109089 | None:intergenic |
| CTCTTGCAAACGGTGGAGCC+TGG | 0.323232 | 8_1:+29110095 | Msa1188650:CDS |
| GGTTGGTTCAGTTGATTAGA+TGG | 0.334479 | 8_1:+29109615 | Msa1188650:CDS |
| AGATGGTTTGCGGTGAAATC+AGG | 0.348857 | 8_1:+29109632 | Msa1188650:CDS |
| ACCTCTGATATACAATATTC+TGG | 0.351841 | 8_1:-29112732 | None:intergenic |
| ACGGGTCTCCGACGAGTGCC+TGG | 0.353503 | 8_1:-29109287 | None:intergenic |
| GAAGGTGTTGTTGTTGGAGG+AGG | 0.357493 | 8_1:+29109656 | Msa1188650:CDS |
| TTTGGTGATGGTTGTTGGGT+TGG | 0.360651 | 8_1:+29109598 | Msa1188650:CDS |
| TAGGATCTCCGGTTGGCTGC+AGG | 0.381013 | 8_1:+29113739 | Msa1188650:CDS |
| ATAAAGAAATTGGTGAATAA+GGG | 0.388569 | 8_1:+29109863 | Msa1188650:CDS |
| AAGCATGCTGCTGATGGGCT+TGG | 0.396884 | 8_1:+29110058 | Msa1188650:CDS |
| TCAGGGGAAGGTGTTGTTGT+TGG | 0.399808 | 8_1:+29109650 | Msa1188650:CDS |
| GTTGTTGGAGGAGGGTTTGG+TGG | 0.401037 | 8_1:+29109665 | Msa1188650:CDS |
| TGCTAGAGGGGTGGTTGAGA+GGG | 0.405979 | 8_1:+29110027 | Msa1188650:CDS |
| TGTGAAGGGGAATGGGTATG+AGG | 0.407225 | 8_1:+29109976 | Msa1188650:CDS |
| GGAAGTCTGAGAAGCAGAAA+TGG | 0.410838 | 8_1:+29109537 | Msa1188650:CDS |
| AAGGTGTTGTTGTTGGAGGA+GGG | 0.412001 | 8_1:+29109657 | Msa1188650:CDS |
| ACATCGGAATCGACGGTAAC+GGG | 0.416210 | 8_1:-29109232 | None:intergenic |
| TTGTTGGAGGAGGGTTTGGT+GGG | 0.416888 | 8_1:+29109666 | Msa1188650:CDS |
| TGGTGGTTTGGATGAGATAA+GGG | 0.421397 | 8_1:+29110000 | Msa1188650:CDS |
| TTGAAGAATGTGAAGGGGAA+TGG | 0.422634 | 8_1:+29109968 | Msa1188650:CDS |
| ATGGTGTTATCGACACAATA+AGG | 0.424895 | 8_1:+29113976 | Msa1188650:CDS |
| TGGCCTTCTCTAGCTGGGGT+TGG | 0.430874 | 8_1:+29112911 | Msa1188650:CDS |
| TATTTGGAGGAATTGAAGAT+GGG | 0.431226 | 8_1:+29109902 | Msa1188650:CDS |
| GGGGAAGGTGTTGTTGTTGG+AGG | 0.431817 | 8_1:+29109653 | Msa1188650:CDS |
| AGCATGCTGCTGATGGGCTT+GGG | 0.433912 | 8_1:+29110059 | Msa1188650:CDS |
| TGCTGATGGGCTTGGGAGGG+TGG | 0.434569 | 8_1:+29110066 | Msa1188650:CDS |
| TTGCTAGAGGGGTGGTTGAG+AGG | 0.435402 | 8_1:+29110026 | Msa1188650:CDS |
| ACCGGAGATCCTACAGTCCT+TGG | 0.437367 | 8_1:-29113729 | None:intergenic |
| GATGCGAAAATTGAGCAAAA+AGG | 0.442955 | 8_1:+29109821 | Msa1188650:CDS |
| ATGCTGCTGATGGGCTTGGG+AGG | 0.444413 | 8_1:+29110062 | Msa1188650:CDS |
| AAGGGGAATGGGTATGAGGG+TGG | 0.445431 | 8_1:+29109980 | Msa1188650:CDS |
| TGCTGCTGATGGGCTTGGGA+GGG | 0.446668 | 8_1:+29110063 | Msa1188650:CDS |
| TGAAGAATGTGAAGGGGAAT+GGG | 0.447731 | 8_1:+29109969 | Msa1188650:CDS |
| TTCTTGTCGGTGGAGATGAC+GGG | 0.449482 | 8_1:-29109305 | None:intergenic |
| ATATTTGGAGGAATTGAAGA+TGG | 0.454265 | 8_1:+29109901 | Msa1188650:CDS |
| ATTGCTCCCCTGCAGCCAAC+CGG | 0.455050 | 8_1:-29113747 | None:intergenic |
| TTTCTTGTCGGTGGAGATGA+CGG | 0.462650 | 8_1:-29109306 | None:intergenic |
| GGAGTATGAGGACAGGATTA+CGG | 0.467788 | 8_1:+29109694 | Msa1188650:CDS |
| GGAAGGGTTCTTGCCGTCGC+CGG | 0.469673 | 8_1:-29109384 | None:intergenic |
| AAGAAGATTGAGAATGAGGT+TGG | 0.470533 | 8_1:+29109779 | Msa1188650:CDS |
| TGGTGGGTTAAAGAAAGAAA+TGG | 0.477946 | 8_1:+29109799 | Msa1188650:CDS |
| GATAAGGGAGTTTGCTAGAG+GGG | 0.483076 | 8_1:+29110015 | Msa1188650:CDS |
| GGCAGGAGTCAAAAGTTCCC+TGG | 0.485602 | 8_1:+29112938 | Msa1188650:CDS |
| AGGCTTATGATGTGGGGAGG+GGG | 0.486706 | 8_1:+29110134 | Msa1188650:CDS |
| GGTCATATGTAAACTCTGTC+AGG | 0.489044 | 8_1:-29113805 | None:intergenic |
| ACGCGGCGTGTGAGGAAGAA+TGG | 0.491681 | 8_1:+29109512 | Msa1188650:CDS |
| CGACCGTTACCTGCGGTGGA+AGG | 0.494069 | 8_1:-29109401 | None:intergenic |
| CCCAAGGACTGTAGGATCTC+CGG | 0.495776 | 8_1:+29113728 | Msa1188650:CDS |
| GGGTTCTTGTTGCTGTTGCA+GGG | 0.496573 | 8_1:+29112855 | Msa1188650:CDS |
| TTCTTGTTGAATGCTAGAAA+TGG | 0.498645 | 8_1:+29110163 | Msa1188650:CDS |
| AGATTGAGAATGAGGTTGGT+GGG | 0.499972 | 8_1:+29109783 | Msa1188650:CDS |
| GTGAAGGGGAATGGGTATGA+GGG | 0.502015 | 8_1:+29109977 | Msa1188650:CDS |
| ATTGAGAAGCATGCTGCTGA+TGG | 0.504508 | 8_1:+29110052 | Msa1188650:CDS |
| TGGAGAAGCGGCGACGTCGT+TGG | 0.506166 | 8_1:-29109354 | None:intergenic |
| AGGATCTCCGGTTGGCTGCA+GGG | 0.506834 | 8_1:+29113740 | Msa1188650:CDS |
| GGATCTCCGGTTGGCTGCAG+GGG | 0.507521 | 8_1:+29113741 | Msa1188650:CDS |
| GGGAATGGGTATGAGGGTGG+TGG | 0.510380 | 8_1:+29109983 | Msa1188650:CDS |
| GATGGTTTGCGGTGAAATCA+GGG | 0.512312 | 8_1:+29109633 | Msa1188650:CDS |
| TTTGGAGGAATTGAAGATGG+GGG | 0.512496 | 8_1:+29109904 | Msa1188650:CDS |
| GACCGTTACCTGCGGTGGAA+GGG | 0.512947 | 8_1:-29109400 | None:intergenic |
| CAACAAAGAGGGTCGCCGGT+GGG | 0.514500 | 8_1:+29109483 | Msa1188650:CDS |
| TTCCGTTGAAGGGTAGCAGC+GGG | 0.518235 | 8_1:+29110245 | Msa1188650:CDS |
| CCGGAGATCCTACAGTCCTT+GGG | 0.518975 | 8_1:-29113728 | None:intergenic |
| GGCGAAGATGATGCAGGTGC+AGG | 0.521812 | 8_1:+29109742 | Msa1188650:CDS |
| TCGAAAGAACAGCATCGCTT+CGG | 0.525907 | 8_1:-29109445 | None:intergenic |
| TGAGGACAGGATTACGGAGA+TGG | 0.525965 | 8_1:+29109700 | Msa1188650:CDS |
| TCAATCACGGCGGCGAACCC+AGG | 0.528589 | 8_1:+29109269 | Msa1188650:CDS |
| GCCGGCGGTGTTTGGAGAAG+CGG | 0.528769 | 8_1:-29109366 | None:intergenic |
| GTGGTGGTTTGGATGAGATA+AGG | 0.529906 | 8_1:+29109999 | Msa1188650:CDS |
| GGCATCCACCGTGTCAATCA+CGG | 0.529936 | 8_1:+29109256 | Msa1188650:CDS |
| AACAAAGAGGGTCGCCGGTG+GGG | 0.532678 | 8_1:+29109484 | Msa1188650:CDS |
| CATTCAGAGGCTTATGATGT+GGG | 0.533817 | 8_1:+29110127 | Msa1188650:CDS |
| TCTTGCAAACGGTGGAGCCT+GGG | 0.534740 | 8_1:+29110096 | Msa1188650:CDS |
| TAAATTGGAGAGATATTTGG+AGG | 0.536002 | 8_1:+29109889 | Msa1188650:CDS |
| ATGTATAGATCTGAAGAAGA+AGG | 0.536214 | 8_1:-29109106 | None:intergenic |
| AAGATTGAGAATGAGGTTGG+TGG | 0.541516 | 8_1:+29109782 | Msa1188650:CDS |
| TTTGAGCATTGCTCTTCTCA+AGG | 0.542588 | 8_1:-29113826 | None:intergenic |
| ATTTGGAGGAATTGAAGATG+GGG | 0.543905 | 8_1:+29109903 | Msa1188650:CDS |
| GAGGCTTATGATGTGGGGAG+GGG | 0.544277 | 8_1:+29110133 | Msa1188650:CDS |
| GTGGATTATGCTCTTGCAAA+CGG | 0.545502 | 8_1:+29110085 | Msa1188650:CDS |
| GGCAAGAACCCTTCCACCGC+AGG | 0.545571 | 8_1:+29109392 | Msa1188650:CDS |
| TTCAACGGAAAACACTGTCC+AGG | 0.550942 | 8_1:-29110232 | None:intergenic |
| AGGGTTCTTGCCGTCGCCGG+CGG | 0.551415 | 8_1:-29109381 | None:intergenic |
| TCTCCAAACACCGCCGGCGA+CGG | 0.552936 | 8_1:+29109371 | Msa1188650:CDS |
| TAAAGAAATTGGTGAATAAG+GGG | 0.553983 | 8_1:+29109864 | Msa1188650:CDS |
| AACCCTTCCACCGCAGGTAA+CGG | 0.554510 | 8_1:+29109398 | Msa1188650:CDS |
| AGAACCATAAATAAGAGTCC+AGG | 0.557598 | 8_1:-29112956 | None:intergenic |
| GAAGTCTGAGAAGCAGAAAT+GGG | 0.557967 | 8_1:+29109538 | Msa1188650:CDS |
| CTCTGAATGTCTCACAACCC+AGG | 0.558003 | 8_1:-29110113 | None:intergenic |
| AAGGGAGTTTGCTAGAGGGG+TGG | 0.558804 | 8_1:+29110018 | Msa1188650:CDS |
| GTCACGACCGTTACCTGCGG+TGG | 0.558974 | 8_1:-29109405 | None:intergenic |
| GGAGGGTTTGTTGAAGAAGA+CGG | 0.559624 | 8_1:+29109721 | Msa1188650:CDS |
| GGGATTCAACGCGGCGTGTG+AGG | 0.559961 | 8_1:+29109504 | Msa1188650:CDS |
| TGTTCCAAAGTAACAGCCTC+AGG | 0.560120 | 8_1:-29110301 | None:intergenic |
| TGATCGATCTAGCGCTCCCA+AGG | 0.560521 | 8_1:+29113712 | Msa1188650:CDS |
| GGATAAGAAGATTGAGAATG+AGG | 0.561620 | 8_1:+29109775 | Msa1188650:CDS |
| CTGGGTTGTGAGACATTCAG+AGG | 0.564677 | 8_1:+29110114 | Msa1188650:CDS |
| TACTTTGGAACATGTAGCAA+AGG | 0.564922 | 8_1:+29110312 | Msa1188650:CDS |
| AACCCGCTGCTACCCTTCAA+CGG | 0.565773 | 8_1:-29110247 | None:intergenic |
| AGATAAGGGAGTTTGCTAGA+GGG | 0.565852 | 8_1:+29110014 | Msa1188650:CDS |
| CTAGCGCTCCCAAGGACTGT+AGG | 0.566223 | 8_1:+29113720 | Msa1188650:CDS |
| GAGGGTTTGAAGAATGTGAA+GGG | 0.566640 | 8_1:+29109962 | Msa1188650:CDS |
| GGAGTTTGAGAAATTTGTCG+AGG | 0.567034 | 8_1:+29109943 | Msa1188650:CDS |
| CCGGCAACAAAGAGGGTCGC+CGG | 0.568658 | 8_1:+29109479 | Msa1188650:CDS |
| GCAACAAAGAGGGTCGCCGG+TGG | 0.569737 | 8_1:+29109482 | Msa1188650:CDS |
| AAACCAACCCCAGCTAGAGA+AGG | 0.571203 | 8_1:-29112914 | None:intergenic |
| GAAGACGGCGAAGATGATGC+AGG | 0.571338 | 8_1:+29109736 | Msa1188650:CDS |
| CGAGGGTTTGAAGAATGTGA+AGG | 0.571521 | 8_1:+29109961 | Msa1188650:CDS |
| TTGAGAAGCATGCTGCTGAT+GGG | 0.576130 | 8_1:+29110053 | Msa1188650:CDS |
| ACATTCAGAGGCTTATGATG+TGG | 0.578130 | 8_1:+29110126 | Msa1188650:CDS |
| GTTCGCCGCCGTGATTGACA+CGG | 0.579959 | 8_1:-29109264 | None:intergenic |
| TCAGTTGATTAGATGGTTTG+CGG | 0.580497 | 8_1:+29109622 | Msa1188650:CDS |
| GCCGCTTCTCCAAACACCGC+CGG | 0.581142 | 8_1:+29109365 | Msa1188650:CDS |
| AGAGGCTTATGATGTGGGGA+GGG | 0.585339 | 8_1:+29110132 | Msa1188650:CDS |
| GAACCATAAATAAGAGTCCA+GGG | 0.588465 | 8_1:-29112955 | None:intergenic |
| GACACGGTGGATGCCGACAT+CGG | 0.588861 | 8_1:-29109248 | None:intergenic |
| TGTCCAGGCTCCCCAAAACT+CGG | 0.589526 | 8_1:-29110217 | None:intergenic |
| GACATCGGAATCGACGGTAA+CGG | 0.589622 | 8_1:-29109233 | None:intergenic |
| GACAGGATTACGGAGATGGA+GGG | 0.590810 | 8_1:+29109704 | Msa1188650:CDS |
| GGCGTGTGAGGAAGAATGGT+GGG | 0.592285 | 8_1:+29109516 | Msa1188650:CDS |
| TATAGATCTGAAGAAGAAGG+AGG | 0.592480 | 8_1:-29109103 | None:intergenic |
| GGACAGGATTACGGAGATGG+AGG | 0.594567 | 8_1:+29109703 | Msa1188650:CDS |
| GAGTTTGAGAAATTTGTCGA+GGG | 0.596205 | 8_1:+29109944 | Msa1188650:CDS |
| TTTAGCACCGGCAACAAAGA+GGG | 0.596553 | 8_1:+29109472 | Msa1188650:CDS |
| TTTCTGGCCTTCTCTAGCTG+GGG | 0.601864 | 8_1:+29112907 | Msa1188650:CDS |
| GAGATAAGGGAGTTTGCTAG+AGG | 0.602343 | 8_1:+29110013 | Msa1188650:CDS |
| GTTACCGTCGATTCCGATGT+CGG | 0.606283 | 8_1:+29109235 | Msa1188650:exon |
| TCCAGAATATTGTATATCAG+AGG | 0.612452 | 8_1:+29112731 | Msa1188650:CDS |
| CAGAGGCTTATGATGTGGGG+AGG | 0.614422 | 8_1:+29110131 | Msa1188650:CDS |
| AAAGAAATTGGTGAATAAGG+GGG | 0.615746 | 8_1:+29109865 | Msa1188650:CDS |
| GATGCAGGTGCAGGTTGATG+TGG | 0.620469 | 8_1:+29109751 | Msa1188650:CDS |
| TTGACTTATGTAGCGGACTG+CGG | 0.623865 | 8_1:+29112666 | Msa1188650:intron |
| GCAGGTGCAGGTTGATGTGG+TGG | 0.627254 | 8_1:+29109754 | Msa1188650:CDS |
| AGGGTTTGAAGAATGTGAAG+GGG | 0.628353 | 8_1:+29109963 | Msa1188650:CDS |
| GCGTGCTGAAATCGTTCCTG+AGG | 0.629496 | 8_1:+29110285 | Msa1188650:CDS |
| ATTTAGCACCGGCAACAAAG+AGG | 0.630992 | 8_1:+29109471 | Msa1188650:CDS |
| CGGCGTGTGAGGAAGAATGG+TGG | 0.637066 | 8_1:+29109515 | Msa1188650:CDS |
| AGAAATGGGTTACTGTGGCG+AGG | 0.645036 | 8_1:+29109552 | Msa1188650:CDS |
| ATGGTTTGCGGTGAAATCAG+GGG | 0.645181 | 8_1:+29109634 | Msa1188650:CDS |
| GATGCCGACATCGGAATCGA+CGG | 0.646522 | 8_1:-29109239 | None:intergenic |
| TCTTTCGAAAGATTTAGCAC+CGG | 0.657751 | 8_1:+29109460 | Msa1188650:CDS |
| TTTGCGGTGAAATCAGGGGA+AGG | 0.668607 | 8_1:+29109638 | Msa1188650:CDS |
| GAGAAGTTCGAGATTACTAG+CGG | 0.670249 | 8_1:-29109330 | None:intergenic |
| AGGACTGTAGGATCTCCGGT+TGG | 0.676222 | 8_1:+29113732 | Msa1188650:CDS |
| TTTCCGTTGAAGGGTAGCAG+CGG | 0.679450 | 8_1:+29110244 | Msa1188650:CDS |
| ATTCAGAGGCTTATGATGTG+GGG | 0.689432 | 8_1:+29110128 | Msa1188650:CDS |
| GAAGCAGAAATGGGTTACTG+TGG | 0.699746 | 8_1:+29109547 | Msa1188650:CDS |
| GATTATGCTCTTGCAAACGG+TGG | 0.702843 | 8_1:+29110088 | Msa1188650:CDS |
| CGCCGCCGTGATTGACACGG+TGG | 0.708669 | 8_1:-29109261 | None:intergenic |
| CAAGTCACGACCGTTACCTG+CGG | 0.708756 | 8_1:-29109408 | None:intergenic |
| ATCCACCGTGTCAATCACGG+CGG | 0.801940 | 8_1:+29109259 | Msa1188650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAATTTTCATATATTCA+AGG | - | chr8_1:29110450-29110469 | None:intergenic | 10.0% |
| !!! | AAATTTTTATGATATAAACA+AGG | - | chr8_1:29112595-29112614 | None:intergenic | 10.0% |
| !! | AAAAAGAATGAATGAAATAT+TGG | - | chr8_1:29109174-29109193 | None:intergenic | 15.0% |
| !! | ATAACATAAACTTAATTCAT+GGG | - | chr8_1:29110549-29110568 | None:intergenic | 15.0% |
| !! | AAAATAAGTTTATGTTATCT+AGG | + | chr8_1:29110705-29110724 | Msa1188650:intron | 15.0% |
| !!! | TCAAATTATTTTATTTCTAG+TGG | - | chr8_1:29111557-29111576 | None:intergenic | 15.0% |
| !! | CTAGAAATAAAATAATTTGA+AGG | + | chr8_1:29111557-29111576 | Msa1188650:intron | 15.0% |
| !!! | AAAAAGTACAATTTAATACA+TGG | - | chr8_1:29111764-29111783 | None:intergenic | 15.0% |
| !!! | TTTGTATATGTTTTCATATT+TGG | + | chr8_1:29111877-29111896 | Msa1188650:intron | 15.0% |
| !!! | TTTCTCTTATAGTTTTTTTT+AGG | + | chr8_1:29112278-29112297 | Msa1188650:intron | 15.0% |
| !! | ATTAATTCATAAACTTTCTT+GGG | + | chr8_1:29112769-29112788 | Msa1188650:intron | 15.0% |
| !!! | GTTTATATTATAACATTTTC+TGG | + | chr8_1:29112891-29112910 | Msa1188650:CDS | 15.0% |
| !! | GAAAAATATTATATAAGCAA+AGG | - | chr8_1:29112987-29113006 | None:intergenic | 15.0% |
| !! | ATAAAGAAATTGGTGAATAA+GGG | + | chr8_1:29109863-29109882 | Msa1188650:CDS | 20.0% |
| !! | TAGTTAAAAAAGAATATGCA+TGG | - | chr8_1:29110343-29110362 | None:intergenic | 20.0% |
| !! | CATAACATAAACTTAATTCA+TGG | - | chr8_1:29110550-29110569 | None:intergenic | 20.0% |
| !! | GAATTAAGTTTATGTTATGT+AGG | + | chr8_1:29110551-29110570 | Msa1188650:intron | 20.0% |
| !!! | TTTTCTTTTTTCCTTGTAAT+TGG | + | chr8_1:29110665-29110684 | Msa1188650:intron | 20.0% |
| !!! | TTTCTTTTTTCCTTGTAATT+GGG | + | chr8_1:29110666-29110685 | Msa1188650:intron | 20.0% |
| !!! | AATTCGTTTTTTTTGTACTT+AGG | + | chr8_1:29110818-29110837 | Msa1188650:intron | 20.0% |
| !! | TGCTATTAACTAATTATTAG+CGG | + | chr8_1:29110874-29110893 | Msa1188650:intron | 20.0% |
| !!! | TACATTATTTGAGAACATTT+TGG | + | chr8_1:29111300-29111319 | Msa1188650:intron | 20.0% |
| !!! | GAAAGTATTAATTTTAACAG+TGG | - | chr8_1:29111680-29111699 | None:intergenic | 20.0% |
| !!! | TATATGTTTTCATATTTGGT+GGG | + | chr8_1:29111881-29111900 | Msa1188650:intron | 20.0% |
| !! | TACTGTTATAGTAAATACAA+TGG | + | chr8_1:29112109-29112128 | Msa1188650:intron | 20.0% |
| !! | ACTGTTATAGTAAATACAAT+GGG | + | chr8_1:29112110-29112129 | Msa1188650:intron | 20.0% |
| !! | AACTATAAGAGAAACTATTA+AGG | - | chr8_1:29112272-29112291 | None:intergenic | 20.0% |
| !! | TAATATTGCATAATACTCTA+GGG | - | chr8_1:29112632-29112651 | None:intergenic | 20.0% |
| !!! | TAGAGTATTATGCAATATTA+GGG | + | chr8_1:29112632-29112651 | Msa1188650:intron | 20.0% |
| !! | ACAAAAAACCTTTAATTCTA+AGG | - | chr8_1:29112693-29112712 | None:intergenic | 20.0% |
| !! | GATTAATTCATAAACTTTCT+TGG | + | chr8_1:29112768-29112787 | Msa1188650:intron | 20.0% |
| !! | ATTATAATATATTGGTAGGT+TGG | + | chr8_1:29112833-29112852 | Msa1188650:intron | 20.0% |
| !! | TTATAATATATTGGTAGGTT+GGG | + | chr8_1:29112834-29112853 | Msa1188650:intron | 20.0% |
| !! | ATATCAACTACAACAATATA+AGG | - | chr8_1:29113026-29113045 | None:intergenic | 20.0% |
| !!! | ATTGTTATTATATTCCCTTT+TGG | - | chr8_1:29113301-29113320 | None:intergenic | 20.0% |
| !!! | TTGAGTATACCATTTAAAAT+TGG | + | chr8_1:29113327-29113346 | Msa1188650:intron | 20.0% |
| !!! | TCTATCTAACCAATTTTAAA+TGG | - | chr8_1:29113339-29113358 | None:intergenic | 20.0% |
| !!! | TATATCTTTAACTGTTTTTC+TGG | + | chr8_1:29113373-29113392 | Msa1188650:intron | 20.0% |
| !! | ACTAACAATATTCAAAGAAA+TGG | - | chr8_1:29113652-29113671 | None:intergenic | 20.0% |
| ! | GATAAAGAAATTGGTGAATA+AGG | + | chr8_1:29109862-29109881 | Msa1188650:CDS | 25.0% |
| ! | TAAAGAAATTGGTGAATAAG+GGG | + | chr8_1:29109864-29109883 | Msa1188650:CDS | 25.0% |
| !!! | AGAATTGAGATGTTTGTTAT+AGG | + | chr8_1:29110477-29110496 | Msa1188650:intron | 25.0% |
| !! | TTTTTATAAGTGCATGCATT+TGG | + | chr8_1:29110754-29110773 | Msa1188650:intron | 25.0% |
| !! | TTTTATAAGTGCATGCATTT+GGG | + | chr8_1:29110755-29110774 | Msa1188650:intron | 25.0% |
| ! | TGATTTAAAAAGCCAATTTG+TGG | - | chr8_1:29110915-29110934 | None:intergenic | 25.0% |
| ! | AAATCAAGCTTACATATGAT+AGG | + | chr8_1:29110929-29110948 | Msa1188650:intron | 25.0% |
| !!! | TATTTGAGAACATTTTGGAA+TGG | + | chr8_1:29111305-29111324 | Msa1188650:intron | 25.0% |
| ! | GGTTAAATCAAGTCAATTAT+AGG | - | chr8_1:29111390-29111409 | None:intergenic | 25.0% |
| ! | AACAAATGTCTCATTAAATG+AGG | - | chr8_1:29111480-29111499 | None:intergenic | 25.0% |
| ! | ACATATACAAAAAAATCTGC+AGG | - | chr8_1:29111868-29111887 | None:intergenic | 25.0% |
| !! | GTATATGTTTTCATATTTGG+TGG | + | chr8_1:29111880-29111899 | Msa1188650:intron | 25.0% |
| ! | GAAGAAAATATACACTAAAC+TGG | - | chr8_1:29112035-29112054 | None:intergenic | 25.0% |
| ! | AAATCTAGAGATTAATGTGT+TGG | - | chr8_1:29112248-29112267 | None:intergenic | 25.0% |
| ! | AATATTGCATAATACTCTAG+GGG | - | chr8_1:29112631-29112650 | None:intergenic | 25.0% |
| ! | CTAATATTGCATAATACTCT+AGG | - | chr8_1:29112633-29112652 | None:intergenic | 25.0% |
| !! | CTAGAGTATTATGCAATATT+AGG | + | chr8_1:29112631-29112650 | Msa1188650:intron | 25.0% |
| ! | GTTTGGGGATTATAATATAT+TGG | + | chr8_1:29112825-29112844 | Msa1188650:intron | 25.0% |
| ! | TATAATATATTGGTAGGTTG+GGG | + | chr8_1:29112835-29112854 | Msa1188650:intron | 25.0% |
| !!! | TCATTTTGATTCATATCATG+AGG | - | chr8_1:29113214-29113233 | None:intergenic | 25.0% |
| ! | ATATTCTTTGTAAGCTAAGT+TGG | + | chr8_1:29113539-29113558 | Msa1188650:intron | 25.0% |
| ! | TCAGTATCAATTACAGAATT+AGG | - | chr8_1:29113773-29113792 | None:intergenic | 25.0% |
| ! | NNNNNNNNNTCAGCAGGTTA+TGG | + | chr8_1:29113957-29113976 | Msa1188650:intron | 25.0% |
| ATGTATAGATCTGAAGAAGA+AGG | - | chr8_1:29109109-29109128 | None:intergenic | 30.0% | |
| GGAGAATGAGATAAAGAAAT+TGG | + | chr8_1:29109853-29109872 | Msa1188650:CDS | 30.0% | |
| AAAGAAATTGGTGAATAAGG+GGG | + | chr8_1:29109865-29109884 | Msa1188650:CDS | 30.0% | |
| GGATAAATTGGAGAGATATT+TGG | + | chr8_1:29109886-29109905 | Msa1188650:CDS | 30.0% | |
| TAAATTGGAGAGATATTTGG+AGG | + | chr8_1:29109889-29109908 | Msa1188650:CDS | 30.0% | |
| ATATTTGGAGGAATTGAAGA+TGG | + | chr8_1:29109901-29109920 | Msa1188650:CDS | 30.0% | |
| TATTTGGAGGAATTGAAGAT+GGG | + | chr8_1:29109902-29109921 | Msa1188650:CDS | 30.0% | |
| TTCTTGTTGAATGCTAGAAA+TGG | + | chr8_1:29110163-29110182 | Msa1188650:CDS | 30.0% | |
| !! | GAAATTTGATGATGCATACT+TGG | + | chr8_1:29110499-29110518 | Msa1188650:intron | 30.0% |
| GTTTATGTTATGTAGGATCA+TGG | + | chr8_1:29110558-29110577 | Msa1188650:intron | 30.0% | |
| ! | TTATCTAGGATCATATCAAC+TGG | + | chr8_1:29110719-29110738 | Msa1188650:intron | 30.0% |
| TGCATCTTCTACAAACTATA+CGG | - | chr8_1:29110799-29110818 | None:intergenic | 30.0% | |
| ATATGATAGGAGAAACATCT+AGG | + | chr8_1:29110942-29110961 | Msa1188650:intron | 30.0% | |
| TGAAGCTTACTGCATTTATA+AGG | + | chr8_1:29110987-29111006 | Msa1188650:intron | 30.0% | |
| GAAGCTTACTGCATTTATAA+GGG | + | chr8_1:29110988-29111007 | Msa1188650:intron | 30.0% | |
| AAGCTTACTGCATTTATAAG+GGG | + | chr8_1:29110989-29111008 | Msa1188650:intron | 30.0% | |
| TGCATTAGACTATCAAATCA+TGG | - | chr8_1:29111411-29111430 | None:intergenic | 30.0% | |
| !!! | TCTTGGTTATTTTAGAGTCA+AGG | + | chr8_1:29111448-29111467 | Msa1188650:intron | 30.0% |
| GCAATATGAATAGATCCAAT+GGG | - | chr8_1:29111535-29111554 | None:intergenic | 30.0% | |
| ! | TGTTTTACATCAAAAGAACG+TGG | + | chr8_1:29111584-29111603 | Msa1188650:intron | 30.0% |
| CTTTCTCAGTTAAGAAAACT+TGG | + | chr8_1:29111695-29111714 | Msa1188650:intron | 30.0% | |
| AGTTAAGAAAACTTGGTATG+CGG | + | chr8_1:29111702-29111721 | Msa1188650:intron | 30.0% | |
| ! | TTACTGTCATTTGCATGATT+GGG | + | chr8_1:29111839-29111858 | Msa1188650:intron | 30.0% |
| ! | CTTCTTTTAATCTGCTACAA+AGG | + | chr8_1:29112051-29112070 | Msa1188650:intron | 30.0% |
| !!! | ACACTGTACTTTTTTGTGTA+TGG | + | chr8_1:29112532-29112551 | Msa1188650:intron | 30.0% |
| ! | ATGTTGTTTGACTTATGTAG+CGG | + | chr8_1:29112659-29112678 | Msa1188650:intron | 30.0% |
| TCCAGAATATTGTATATCAG+AGG | + | chr8_1:29112731-29112750 | Msa1188650:CDS | 30.0% | |
| ACCTCTGATATACAATATTC+TGG | - | chr8_1:29112735-29112754 | None:intergenic | 30.0% | |
| ! | AAACTTCTTCCAAAGTTTTG+GGG | - | chr8_1:29112809-29112828 | None:intergenic | 30.0% |
| ! | CAAACTTCTTCCAAAGTTTT+GGG | - | chr8_1:29112810-29112829 | None:intergenic | 30.0% |
| ! | CAAAACTTTGGAAGAAGTTT+GGG | + | chr8_1:29112809-29112828 | Msa1188650:intron | 30.0% |
| ! | AAAACTTTGGAAGAAGTTTG+GGG | + | chr8_1:29112810-29112829 | Msa1188650:intron | 30.0% |
| GGGGATTATAATATATTGGT+AGG | + | chr8_1:29112829-29112848 | Msa1188650:intron | 30.0% | |
| TGAGGATTCAACAAAGATTT+AGG | - | chr8_1:29113196-29113215 | None:intergenic | 30.0% | |
| GTGTGAAAAAAGAAGGTAAT+CGG | - | chr8_1:29113239-29113258 | None:intergenic | 30.0% | |
| CAGTAATGTGTGAAAAAAGA+AGG | - | chr8_1:29113246-29113265 | None:intergenic | 30.0% | |
| TTGAGCTAGATGTTATTCTT+TGG | + | chr8_1:29113274-29113293 | Msa1188650:intron | 30.0% | |
| ATGTTATTCTTTGGACCAAA+AGG | + | chr8_1:29113283-29113302 | Msa1188650:intron | 30.0% | |
| TGTTATTCTTTGGACCAAAA+GGG | + | chr8_1:29113284-29113303 | Msa1188650:intron | 30.0% | |
| ! | TAAAACTTGACTAAAAGCAC+AGG | - | chr8_1:29113405-29113424 | None:intergenic | 30.0% |
| AAATTCTGTGTGAATTACCA+AGG | - | chr8_1:29113457-29113476 | None:intergenic | 30.0% | |
| ! | TGTCCTAATATTTGCTACAT+AGG | + | chr8_1:29113504-29113523 | Msa1188650:intron | 30.0% |
| AAGCCTATGTAGCAAATATT+AGG | - | chr8_1:29113510-29113529 | None:intergenic | 30.0% | |
| TATAGATCTGAAGAAGAAGG+AGG | - | chr8_1:29109106-29109125 | None:intergenic | 35.0% | |
| ! | ATTACTAGCGGTTTTCTTGT+CGG | - | chr8_1:29109321-29109340 | None:intergenic | 35.0% |
| TCTTTCGAAAGATTTAGCAC+CGG | + | chr8_1:29109460-29109479 | Msa1188650:CDS | 35.0% | |
| ! | AGGATTTTCGCCAAGAATTT+TGG | + | chr8_1:29109572-29109591 | Msa1188650:CDS | 35.0% |
| ! | GGATTTTCGCCAAGAATTTT+GGG | + | chr8_1:29109573-29109592 | Msa1188650:CDS | 35.0% |
| TCAGTTGATTAGATGGTTTG+CGG | + | chr8_1:29109622-29109641 | Msa1188650:CDS | 35.0% | |
| GGATAAGAAGATTGAGAATG+AGG | + | chr8_1:29109775-29109794 | Msa1188650:CDS | 35.0% | |
| AAGAAGATTGAGAATGAGGT+TGG | + | chr8_1:29109779-29109798 | Msa1188650:CDS | 35.0% | |
| !! | TGGTGGGTTAAAGAAAGAAA+TGG | + | chr8_1:29109799-29109818 | Msa1188650:CDS | 35.0% |
| GATGCGAAAATTGAGCAAAA+AGG | + | chr8_1:29109821-29109840 | Msa1188650:CDS | 35.0% | |
| ATTTGGAGGAATTGAAGATG+GGG | + | chr8_1:29109903-29109922 | Msa1188650:CDS | 35.0% | |
| GAGTTTGAGAAATTTGTCGA+GGG | + | chr8_1:29109944-29109963 | Msa1188650:CDS | 35.0% | |
| ! | AAGATGTTGAAACCGAGTTT+TGG | + | chr8_1:29110205-29110224 | Msa1188650:CDS | 35.0% |
| ! | AGATGTTGAAACCGAGTTTT+GGG | + | chr8_1:29110206-29110225 | Msa1188650:CDS | 35.0% |
| !! | TACTTTGGAACATGTAGCAA+AGG | + | chr8_1:29110312-29110331 | Msa1188650:CDS | 35.0% |
| !! | TAGGGTGTAGTTTTTAGAAG+TGG | + | chr8_1:29110635-29110654 | Msa1188650:intron | 35.0% |
| CATTTAGTAGCCCAATTACA+AGG | - | chr8_1:29110679-29110698 | None:intergenic | 35.0% | |
| ! | AATTATTAGCGGTTGAGTTG+TGG | + | chr8_1:29110885-29110904 | Msa1188650:intron | 35.0% |
| !!! | ATCTAGGTCGCTTTTGATAT+GGG | + | chr8_1:29110958-29110977 | Msa1188650:intron | 35.0% |
| AGTCTAATGCAATGATTGCT+TGG | + | chr8_1:29111053-29111072 | Msa1188650:intron | 35.0% | |
| !! | TACTCTTTTTGAGCAACACA+TGG | - | chr8_1:29111226-29111245 | None:intergenic | 35.0% |
| !!! | GAGTATCGACTTTTCTCATA+CGG | + | chr8_1:29111241-29111260 | Msa1188650:intron | 35.0% |
| GGCAATATGAATAGATCCAA+TGG | - | chr8_1:29111536-29111555 | None:intergenic | 35.0% | |
| TGAAATACCTATTGCTGAGA+TGG | + | chr8_1:29111791-29111810 | Msa1188650:intron | 35.0% | |
| ! | GTTACTGTCATTTGCATGAT+TGG | + | chr8_1:29111838-29111857 | Msa1188650:intron | 35.0% |
| GAACAAAAATGCAGATTGGA+TGG | - | chr8_1:29111933-29111952 | None:intergenic | 35.0% | |
| GCAAGAACAAAAATGCAGAT+TGG | - | chr8_1:29111937-29111956 | None:intergenic | 35.0% | |
| TTTAATCTGCTACAAAGGTG+AGG | + | chr8_1:29112056-29112075 | Msa1188650:intron | 35.0% | |
| AGGAGGTGGGAAATAAATAT+TGG | + | chr8_1:29112076-29112095 | Msa1188650:intron | 35.0% | |
| !!! | TAAGGCTTGGTTGTTTTTGT+TGG | - | chr8_1:29112156-29112175 | None:intergenic | 35.0% |
| AATGTGTTGGATCGACATAT+GGG | - | chr8_1:29112235-29112254 | None:intergenic | 35.0% | |
| TAATGTGTTGGATCGACATA+TGG | - | chr8_1:29112236-29112255 | None:intergenic | 35.0% | |
| AGTCAGATCACTAGATACAA+AGG | - | chr8_1:29112308-29112327 | None:intergenic | 35.0% | |
| ATCCATAGTAGAAAAGATGG+TGG | - | chr8_1:29112413-29112432 | None:intergenic | 35.0% | |
| AGCATCCATAGTAGAAAAGA+TGG | - | chr8_1:29112416-29112435 | None:intergenic | 35.0% | |
| ATGACAACATTAGAGAGAGT+TGG | - | chr8_1:29112442-29112461 | None:intergenic | 35.0% | |
| ! | CCAAACTTCTTCCAAAGTTT+TGG | - | chr8_1:29112811-29112830 | None:intergenic | 35.0% |
| ! | CCAAAACTTTGGAAGAAGTT+TGG | + | chr8_1:29112808-29112827 | Msa1188650:intron | 35.0% |
| GAACCATAAATAAGAGTCCA+GGG | - | chr8_1:29112958-29112977 | None:intergenic | 35.0% | |
| AGAACCATAAATAAGAGTCC+AGG | - | chr8_1:29112959-29112978 | None:intergenic | 35.0% | |
| GAACTGGTAACAATACATGA+AGG | - | chr8_1:29113070-29113089 | None:intergenic | 35.0% | |
| !! | AAGTTTTAGCAATCTTCTGC+CGG | + | chr8_1:29113417-29113436 | Msa1188650:intron | 35.0% |
| CAAGGAAATCAATTGAGTTC+CGG | - | chr8_1:29113439-29113458 | None:intergenic | 35.0% | |
| GAGAAGTTCGAGATTACTAG+CGG | - | chr8_1:29109333-29109352 | None:intergenic | 40.0% | |
| GAAGTCTGAGAAGCAGAAAT+GGG | + | chr8_1:29109538-29109557 | Msa1188650:CDS | 40.0% | |
| CACCAAAAGCCCAAAATTCT+TGG | - | chr8_1:29109585-29109604 | None:intergenic | 40.0% | |
| ! | GAATTTTGGGCTTTTGGTGA+TGG | + | chr8_1:29109586-29109605 | Msa1188650:CDS | 40.0% |
| ! | GGTTGGTTCAGTTGATTAGA+TGG | + | chr8_1:29109615-29109634 | Msa1188650:CDS | 40.0% |
| AAGATTGAGAATGAGGTTGG+TGG | + | chr8_1:29109782-29109801 | Msa1188650:CDS | 40.0% | |
| ! | AGATTGAGAATGAGGTTGGT+GGG | + | chr8_1:29109783-29109802 | Msa1188650:CDS | 40.0% |
| GGTGAATAAGGGGGATAAAT+TGG | + | chr8_1:29109874-29109893 | Msa1188650:CDS | 40.0% | |
| TTTGGAGGAATTGAAGATGG+GGG | + | chr8_1:29109904-29109923 | Msa1188650:CDS | 40.0% | |
| GGAGTTTGAGAAATTTGTCG+AGG | + | chr8_1:29109943-29109962 | Msa1188650:CDS | 40.0% | |
| GAGGGTTTGAAGAATGTGAA+GGG | + | chr8_1:29109962-29109981 | Msa1188650:CDS | 40.0% | |
| AGGGTTTGAAGAATGTGAAG+GGG | + | chr8_1:29109963-29109982 | Msa1188650:CDS | 40.0% | |
| TTGAAGAATGTGAAGGGGAA+TGG | + | chr8_1:29109968-29109987 | Msa1188650:CDS | 40.0% | |
| TGAAGAATGTGAAGGGGAAT+GGG | + | chr8_1:29109969-29109988 | Msa1188650:CDS | 40.0% | |
| ! | TGGTGGTTTGGATGAGATAA+GGG | + | chr8_1:29110000-29110019 | Msa1188650:CDS | 40.0% |
| !! | AGATAAGGGAGTTTGCTAGA+GGG | + | chr8_1:29110014-29110033 | Msa1188650:CDS | 40.0% |
| ! | GTGGATTATGCTCTTGCAAA+CGG | + | chr8_1:29110085-29110104 | Msa1188650:CDS | 40.0% |
| ACATTCAGAGGCTTATGATG+TGG | + | chr8_1:29110126-29110145 | Msa1188650:CDS | 40.0% | |
| CATTCAGAGGCTTATGATGT+GGG | + | chr8_1:29110127-29110146 | Msa1188650:CDS | 40.0% | |
| ATTCAGAGGCTTATGATGTG+GGG | + | chr8_1:29110128-29110147 | Msa1188650:CDS | 40.0% | |
| ! | GATGTTGAAACCGAGTTTTG+GGG | + | chr8_1:29110207-29110226 | Msa1188650:CDS | 40.0% |
| ! | ACTGACTTATCCATGCCTTT+GGG | + | chr8_1:29110603-29110622 | Msa1188650:intron | 40.0% |
| AGTTGTGGATGTCCACAAAT+TGG | + | chr8_1:29110900-29110919 | Msa1188650:intron | 40.0% | |
| !!! | CATCTAGGTCGCTTTTGATA+TGG | + | chr8_1:29110957-29110976 | Msa1188650:intron | 40.0% |
| ACTGCATTTATAAGGGGAAG+AGG | + | chr8_1:29110995-29111014 | Msa1188650:intron | 40.0% | |
| CTGCATTTATAAGGGGAAGA+GGG | + | chr8_1:29110996-29111015 | Msa1188650:intron | 40.0% | |
| ATTGAATCACCCACCATATG+TGG | + | chr8_1:29111109-29111128 | Msa1188650:intron | 40.0% | |
| ! | CGTACACATGTCTGTTTTCT+TGG | + | chr8_1:29111431-29111450 | Msa1188650:intron | 40.0% |
| CAACAGAGATTAAAGCCCAT+TGG | + | chr8_1:29111517-29111536 | Msa1188650:intron | 40.0% | |
| ! | ATCAAAAGAACGTGGCTTGT+TGG | + | chr8_1:29111592-29111611 | Msa1188650:intron | 40.0% |
| ATCCTAGCAGTGGAACAATT+GGG | - | chr8_1:29111961-29111980 | None:intergenic | 40.0% | |
| AAAAGAACTGTTCCGTACTC+TGG | + | chr8_1:29112003-29112022 | Msa1188650:intron | 40.0% | |
| AAAGAACTGTTCCGTACTCT+GGG | + | chr8_1:29112004-29112023 | Msa1188650:intron | 40.0% | |
| TCACTTAATGGGATAAGGCT+TGG | - | chr8_1:29112169-29112188 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCCCATTAAGTG+AGG | + | chr8_1:29112168-29112187 | Msa1188650:intron | 40.0% |
| CTTATCCCATTAAGTGAGGT+CGG | + | chr8_1:29112172-29112191 | Msa1188650:intron | 40.0% | |
| TGGGATAGGATGGAACATTA+TGG | - | chr8_1:29112216-29112235 | None:intergenic | 40.0% | |
| AGGAGAGTAGATAAGATGGA+GGG | - | chr8_1:29112332-29112351 | None:intergenic | 40.0% | |
| AAGGAGAGTAGATAAGATGG+AGG | - | chr8_1:29112333-29112352 | None:intergenic | 40.0% | |
| GGAAAGGAGAGTAGATAAGA+TGG | - | chr8_1:29112336-29112355 | None:intergenic | 40.0% | |
| CTCCTTTCCACAAAATCTAC+AGG | + | chr8_1:29112347-29112366 | Msa1188650:intron | 40.0% | |
| ! | GACCTGTAGATTTTGTGGAA+AGG | - | chr8_1:29112352-29112371 | None:intergenic | 40.0% |
| ! | GAGAAGACCTGTAGATTTTG+TGG | - | chr8_1:29112357-29112376 | None:intergenic | 40.0% |
| AGACTAGGCTTAAGTGGTTT+GGG | - | chr8_1:29112390-29112409 | None:intergenic | 40.0% | |
| !! | TAGAAAAGATGGTGGAGACT+AGG | - | chr8_1:29112405-29112424 | None:intergenic | 40.0% |
| ! | CTCCACCATCTTTTCTACTA+TGG | + | chr8_1:29112408-29112427 | Msa1188650:intron | 40.0% |
| TCATGACTAACACCATAGAC+AGG | - | chr8_1:29112510-29112529 | None:intergenic | 40.0% | |
| ACTGCGGACCTTAGAATTAA+AGG | + | chr8_1:29112682-29112701 | Msa1188650:CDS | 40.0% | |
| ! | GTTCCCTGGACTCTTATTTA+TGG | + | chr8_1:29112952-29112971 | Msa1188650:CDS | 40.0% |
| AACACAAGCACAAAGAGAAC+TGG | - | chr8_1:29113086-29113105 | None:intergenic | 40.0% | |
| ! | CGGAACTCAATTGATTTCCT+TGG | + | chr8_1:29113437-29113456 | Msa1188650:intron | 40.0% |
| GGTCATATGTAAACTCTGTC+AGG | - | chr8_1:29113808-29113827 | None:intergenic | 40.0% | |
| ! | TTTGAGCATTGCTCTTCTCA+AGG | - | chr8_1:29113829-29113848 | None:intergenic | 40.0% |
| TTTCTTGTCGGTGGAGATGA+CGG | - | chr8_1:29109309-29109328 | None:intergenic | 45.0% | |
| TCGAAAGAACAGCATCGCTT+CGG | - | chr8_1:29109448-29109467 | None:intergenic | 45.0% | |
| !! | ATTTAGCACCGGCAACAAAG+AGG | + | chr8_1:29109471-29109490 | Msa1188650:CDS | 45.0% |
| !! | TTTAGCACCGGCAACAAAGA+GGG | + | chr8_1:29109472-29109491 | Msa1188650:CDS | 45.0% |
| GGAAGTCTGAGAAGCAGAAA+TGG | + | chr8_1:29109537-29109556 | Msa1188650:CDS | 45.0% | |
| !! | GAAGCAGAAATGGGTTACTG+TGG | + | chr8_1:29109547-29109566 | Msa1188650:CDS | 45.0% |
| ! | CGCCAAGAATTTTGGGCTTT+TGG | + | chr8_1:29109580-29109599 | Msa1188650:CDS | 45.0% |
| !!! | GGCTTTTGGTGATGGTTGTT+GGG | + | chr8_1:29109594-29109613 | Msa1188650:CDS | 45.0% |
| !! | TTTGGTGATGGTTGTTGGGT+TGG | + | chr8_1:29109598-29109617 | Msa1188650:CDS | 45.0% |
| ! | AGATGGTTTGCGGTGAAATC+AGG | + | chr8_1:29109632-29109651 | Msa1188650:CDS | 45.0% |
| ! | GATGGTTTGCGGTGAAATCA+GGG | + | chr8_1:29109633-29109652 | Msa1188650:CDS | 45.0% |
| ! | ATGGTTTGCGGTGAAATCAG+GGG | + | chr8_1:29109634-29109653 | Msa1188650:CDS | 45.0% |
| !! | AAGGTGTTGTTGTTGGAGGA+GGG | + | chr8_1:29109657-29109676 | Msa1188650:CDS | 45.0% |
| GGAGTATGAGGACAGGATTA+CGG | + | chr8_1:29109694-29109713 | Msa1188650:CDS | 45.0% | |
| !! | GGAGGGTTTGTTGAAGAAGA+CGG | + | chr8_1:29109721-29109740 | Msa1188650:CDS | 45.0% |
| !! | GATGGGGGATTTGTTAACGA+AGG | + | chr8_1:29109919-29109938 | Msa1188650:CDS | 45.0% |
| CGAGGGTTTGAAGAATGTGA+AGG | + | chr8_1:29109961-29109980 | Msa1188650:CDS | 45.0% | |
| ! | GTGGTGGTTTGGATGAGATA+AGG | + | chr8_1:29109999-29110018 | Msa1188650:CDS | 45.0% |
| !! | GAGATAAGGGAGTTTGCTAG+AGG | + | chr8_1:29110013-29110032 | Msa1188650:CDS | 45.0% |
| !! | GATAAGGGAGTTTGCTAGAG+GGG | + | chr8_1:29110015-29110034 | Msa1188650:CDS | 45.0% |
| ! | ATTGAGAAGCATGCTGCTGA+TGG | + | chr8_1:29110052-29110071 | Msa1188650:CDS | 45.0% |
| ! | TTGAGAAGCATGCTGCTGAT+GGG | + | chr8_1:29110053-29110072 | Msa1188650:CDS | 45.0% |
| GATTATGCTCTTGCAAACGG+TGG | + | chr8_1:29110088-29110107 | Msa1188650:CDS | 45.0% | |
| TTCAACGGAAAACACTGTCC+AGG | - | chr8_1:29110235-29110254 | None:intergenic | 45.0% | |
| ! | TGGACAGTGTTTTCCGTTGA+AGG | + | chr8_1:29110234-29110253 | Msa1188650:CDS | 45.0% |
| ! | GGACAGTGTTTTCCGTTGAA+GGG | + | chr8_1:29110235-29110254 | Msa1188650:CDS | 45.0% |
| ! | GCAGCGGGTTTGTTCAAATT+AGG | + | chr8_1:29110260-29110279 | Msa1188650:CDS | 45.0% |
| TGTTCCAAAGTAACAGCCTC+AGG | - | chr8_1:29110304-29110323 | None:intergenic | 45.0% | |
| ! | GACTGACTTATCCATGCCTT+TGG | + | chr8_1:29110602-29110621 | Msa1188650:intron | 45.0% |
| ACATAACTCACCCAAAGGCA+TGG | - | chr8_1:29110616-29110635 | None:intergenic | 45.0% | |
| TGCCTTTGGGTGAGTTATGT+AGG | + | chr8_1:29110616-29110635 | Msa1188650:intron | 45.0% | |
| GCCTTTGGGTGAGTTATGTA+GGG | + | chr8_1:29110617-29110636 | Msa1188650:intron | 45.0% | |
| ACCCTACATAACTCACCCAA+AGG | - | chr8_1:29110621-29110640 | None:intergenic | 45.0% | |
| CAGACTCAACCACATATGGT+GGG | - | chr8_1:29111121-29111140 | None:intergenic | 45.0% | |
| TCAGACTCAACCACATATGG+TGG | - | chr8_1:29111122-29111141 | None:intergenic | 45.0% | |
| GTCTCAGACTCAACCACATA+TGG | - | chr8_1:29111125-29111144 | None:intergenic | 45.0% | |
| ATACCTATTGCTGAGATGGC+TGG | + | chr8_1:29111795-29111814 | Msa1188650:intron | 45.0% | |
| !! | GTGGGTTGCTTGTGTACTTT+TGG | + | chr8_1:29111899-29111918 | Msa1188650:intron | 45.0% |
| GATCCTAGCAGTGGAACAAT+TGG | - | chr8_1:29111962-29111981 | None:intergenic | 45.0% | |
| CAAACTCAAGATCCTAGCAG+TGG | - | chr8_1:29111971-29111990 | None:intergenic | 45.0% | |
| AACTGGATTTGCCCAGAGTA+CGG | - | chr8_1:29112018-29112037 | None:intergenic | 45.0% | |
| AATCTGCTACAAAGGTGAGG+AGG | + | chr8_1:29112059-29112078 | Msa1188650:intron | 45.0% | |
| CGACCTCACTTAATGGGATA+AGG | - | chr8_1:29112174-29112193 | None:intergenic | 45.0% | |
| TGTAGCCGACCTCACTTAAT+GGG | - | chr8_1:29112180-29112199 | None:intergenic | 45.0% | |
| ATGTAGCCGACCTCACTTAA+TGG | - | chr8_1:29112181-29112200 | None:intergenic | 45.0% | |
| GATCGACATATGGGATAGGA+TGG | - | chr8_1:29112226-29112245 | None:intergenic | 45.0% | |
| GTTGGATCGACATATGGGAT+AGG | - | chr8_1:29112230-29112249 | None:intergenic | 45.0% | |
| GAGACTAGGCTTAAGTGGTT+TGG | - | chr8_1:29112391-29112410 | None:intergenic | 45.0% | |
| GTTGTGTGGTGAGACTAGAT+GGG | - | chr8_1:29112477-29112496 | None:intergenic | 45.0% | |
| ACCAACGCATATCCTGTCTA+TGG | + | chr8_1:29112495-29112514 | Msa1188650:intron | 45.0% | |
| ACCATAGACAGGATATGCGT+TGG | - | chr8_1:29112499-29112518 | None:intergenic | 45.0% | |
| !! | TTGACTTATGTAGCGGACTG+CGG | + | chr8_1:29112666-29112685 | Msa1188650:intron | 45.0% |
| AAACTTTCTTGGGTAGCCCT+TGG | + | chr8_1:29112779-29112798 | Msa1188650:intron | 45.0% | |
| AACTTTCTTGGGTAGCCCTT+GGG | + | chr8_1:29112780-29112799 | Msa1188650:intron | 45.0% | |
| !!! | AAAGTTTTGGGGCTACCCAA+GGG | - | chr8_1:29112798-29112817 | None:intergenic | 45.0% |
| !! | ATTTTCTGGCCTTCTCTAGC+TGG | + | chr8_1:29112905-29112924 | Msa1188650:CDS | 45.0% |
| !! | TTTTCTGGCCTTCTCTAGCT+GGG | + | chr8_1:29112906-29112925 | Msa1188650:CDS | 45.0% |
| ACATCGGAATCGACGGTAAC+GGG | - | chr8_1:29109235-29109254 | None:intergenic | 50.0% | |
| GACATCGGAATCGACGGTAA+CGG | - | chr8_1:29109236-29109255 | None:intergenic | 50.0% | |
| !! | GTTACCGTCGATTCCGATGT+CGG | + | chr8_1:29109235-29109254 | Msa1188650:exon | 50.0% |
| TTCTTGTCGGTGGAGATGAC+GGG | - | chr8_1:29109308-29109327 | None:intergenic | 50.0% | |
| ! | ACTAGCGGTTTTCTTGTCGG+TGG | - | chr8_1:29109318-29109337 | None:intergenic | 50.0% |
| !! | AGAAATGGGTTACTGTGGCG+AGG | + | chr8_1:29109552-29109571 | Msa1188650:CDS | 50.0% |
| !!! | GGGCTTTTGGTGATGGTTGT+TGG | + | chr8_1:29109593-29109612 | Msa1188650:CDS | 50.0% |
| TTTGCGGTGAAATCAGGGGA+AGG | + | chr8_1:29109638-29109657 | Msa1188650:CDS | 50.0% | |
| !! | TCAGGGGAAGGTGTTGTTGT+TGG | + | chr8_1:29109650-29109669 | Msa1188650:CDS | 50.0% |
| !! | GAAGGTGTTGTTGTTGGAGG+AGG | + | chr8_1:29109656-29109675 | Msa1188650:CDS | 50.0% |
| ! | GTTGTTGTTGGAGGAGGGTT+TGG | + | chr8_1:29109662-29109681 | Msa1188650:CDS | 50.0% |
| ! | TTGTTGGAGGAGGGTTTGGT+GGG | + | chr8_1:29109666-29109685 | Msa1188650:CDS | 50.0% |
| !!! | AGGAGGGTTTGGTGGGTTTT+CGG | + | chr8_1:29109673-29109692 | Msa1188650:CDS | 50.0% |
| !!! | TGGTGGGTTTTCGGAGTATG+AGG | + | chr8_1:29109682-29109701 | Msa1188650:CDS | 50.0% |
| ! | GGTTTTCGGAGTATGAGGAC+AGG | + | chr8_1:29109687-29109706 | Msa1188650:CDS | 50.0% |
| TGAGGACAGGATTACGGAGA+TGG | + | chr8_1:29109700-29109719 | Msa1188650:CDS | 50.0% | |
| GACAGGATTACGGAGATGGA+GGG | + | chr8_1:29109704-29109723 | Msa1188650:CDS | 50.0% | |
| ! | TGAGCAAAAAGGCGCGTTCT+TGG | + | chr8_1:29109832-29109851 | Msa1188650:CDS | 50.0% |
| !! | GGGGGATTTGTTAACGAAGG+AGG | + | chr8_1:29109922-29109941 | Msa1188650:CDS | 50.0% |
| TGTGAAGGGGAATGGGTATG+AGG | + | chr8_1:29109976-29109995 | Msa1188650:CDS | 50.0% | |
| GTGAAGGGGAATGGGTATGA+GGG | + | chr8_1:29109977-29109996 | Msa1188650:CDS | 50.0% | |
| CTCTGAATGTCTCACAACCC+AGG | - | chr8_1:29110116-29110135 | None:intergenic | 50.0% | |
| CTGGGTTGTGAGACATTCAG+AGG | + | chr8_1:29110114-29110133 | Msa1188650:CDS | 50.0% | |
| AGAGGCTTATGATGTGGGGA+GGG | + | chr8_1:29110132-29110151 | Msa1188650:CDS | 50.0% | |
| TTTCCGTTGAAGGGTAGCAG+CGG | + | chr8_1:29110244-29110263 | Msa1188650:CDS | 50.0% | |
| ! | CGTTCCTGAGGCTGTTACTT+TGG | + | chr8_1:29110297-29110316 | Msa1188650:CDS | 50.0% |
| ACACCAGCCATCTCAGCAAT+AGG | - | chr8_1:29111801-29111820 | None:intergenic | 50.0% | |
| CTCCCAATTGTTCCACTGCT+AGG | + | chr8_1:29111956-29111975 | Msa1188650:intron | 50.0% | |
| TGCTACAAAGGTGAGGAGGT+GGG | + | chr8_1:29112063-29112082 | Msa1188650:intron | 50.0% | |
| TGGTGGAGACTAGGCTTAAG+TGG | - | chr8_1:29112396-29112415 | None:intergenic | 50.0% | |
| GGTTGTGTGGTGAGACTAGA+TGG | - | chr8_1:29112478-29112497 | None:intergenic | 50.0% | |
| !! | CAGGATATGCGTTGGTTGTG+TGG | - | chr8_1:29112491-29112510 | None:intergenic | 50.0% |
| !!! | CAAAGTTTTGGGGCTACCCA+AGG | - | chr8_1:29112799-29112818 | None:intergenic | 50.0% |
| CTTGGGTAGCCCCAAAACTT+TGG | + | chr8_1:29112797-29112816 | Msa1188650:intron | 50.0% | |
| ! | GGGTTCTTGTTGCTGTTGCA+GGG | + | chr8_1:29112855-29112874 | Msa1188650:CDS | 50.0% |
| ! | TTTCTGGCCTTCTCTAGCTG+GGG | + | chr8_1:29112907-29112926 | Msa1188650:CDS | 50.0% |
| AAACCAACCCCAGCTAGAGA+AGG | - | chr8_1:29112917-29112936 | None:intergenic | 50.0% | |
| !!! | TCTCTAGCTGGGGTTGGTTT+TGG | + | chr8_1:29112917-29112936 | Msa1188650:CDS | 50.0% |
| GATGCCGACATCGGAATCGA+CGG | - | chr8_1:29109242-29109261 | None:intergenic | 55.0% | |
| GGCATCCACCGTGTCAATCA+CGG | + | chr8_1:29109256-29109275 | Msa1188650:CDS | 55.0% | |
| ATCCACCGTGTCAATCACGG+CGG | + | chr8_1:29109259-29109278 | Msa1188650:CDS | 55.0% | |
| AACCCTTCCACCGCAGGTAA+CGG | + | chr8_1:29109398-29109417 | Msa1188650:CDS | 55.0% | |
| CAAGTCACGACCGTTACCTG+CGG | - | chr8_1:29109411-29109430 | None:intergenic | 55.0% | |
| GGCGTGTGAGGAAGAATGGT+GGG | + | chr8_1:29109516-29109535 | Msa1188650:CDS | 55.0% | |
| !! | GGGGAAGGTGTTGTTGTTGG+AGG | + | chr8_1:29109653-29109672 | Msa1188650:CDS | 55.0% |
| GTTGTTGGAGGAGGGTTTGG+TGG | + | chr8_1:29109665-29109684 | Msa1188650:CDS | 55.0% | |
| GGACAGGATTACGGAGATGG+AGG | + | chr8_1:29109703-29109722 | Msa1188650:CDS | 55.0% | |
| GAAGACGGCGAAGATGATGC+AGG | + | chr8_1:29109736-29109755 | Msa1188650:CDS | 55.0% | |
| !! | GATGCAGGTGCAGGTTGATG+TGG | + | chr8_1:29109751-29109770 | Msa1188650:CDS | 55.0% |
| AAGGGGAATGGGTATGAGGG+TGG | + | chr8_1:29109980-29109999 | Msa1188650:CDS | 55.0% | |
| ! | TGGGTATGAGGGTGGTGGTT+TGG | + | chr8_1:29109988-29110007 | Msa1188650:CDS | 55.0% |
| !! | AAGGGAGTTTGCTAGAGGGG+TGG | + | chr8_1:29110018-29110037 | Msa1188650:CDS | 55.0% |
| TTGCTAGAGGGGTGGTTGAG+AGG | + | chr8_1:29110026-29110045 | Msa1188650:CDS | 55.0% | |
| TGCTAGAGGGGTGGTTGAGA+GGG | + | chr8_1:29110027-29110046 | Msa1188650:CDS | 55.0% | |
| !! | AAGCATGCTGCTGATGGGCT+TGG | + | chr8_1:29110058-29110077 | Msa1188650:CDS | 55.0% |
| !! | AGCATGCTGCTGATGGGCTT+GGG | + | chr8_1:29110059-29110078 | Msa1188650:CDS | 55.0% |
| TCTTGCAAACGGTGGAGCCT+GGG | + | chr8_1:29110096-29110115 | Msa1188650:CDS | 55.0% | |
| CAGAGGCTTATGATGTGGGG+AGG | + | chr8_1:29110131-29110150 | Msa1188650:CDS | 55.0% | |
| GAGGCTTATGATGTGGGGAG+GGG | + | chr8_1:29110133-29110152 | Msa1188650:CDS | 55.0% | |
| AGGCTTATGATGTGGGGAGG+GGG | + | chr8_1:29110134-29110153 | Msa1188650:CDS | 55.0% | |
| ATGATGTGGGGAGGGGGAAT+TGG | + | chr8_1:29110140-29110159 | Msa1188650:CDS | 55.0% | |
| !!! | AAACCGAGTTTTGGGGAGCC+TGG | + | chr8_1:29110214-29110233 | Msa1188650:CDS | 55.0% |
| TGTCCAGGCTCCCCAAAACT+CGG | - | chr8_1:29110220-29110239 | None:intergenic | 55.0% | |
| TTCCGTTGAAGGGTAGCAGC+GGG | + | chr8_1:29110245-29110264 | Msa1188650:CDS | 55.0% | |
| AACCCGCTGCTACCCTTCAA+CGG | - | chr8_1:29110250-29110269 | None:intergenic | 55.0% | |
| GCGTGCTGAAATCGTTCCTG+AGG | + | chr8_1:29110285-29110304 | Msa1188650:CDS | 55.0% | |
| CTGCTACAAAGGTGAGGAGG+TGG | + | chr8_1:29112062-29112081 | Msa1188650:intron | 55.0% | |
| ! | GGGGTTCTTGTTGCTGTTGC+AGG | + | chr8_1:29112854-29112873 | Msa1188650:CDS | 55.0% |
| !!! | TAGCTGGGGTTGGTTTTGGC+AGG | + | chr8_1:29112921-29112940 | Msa1188650:CDS | 55.0% |
| GGCAGGAGTCAAAAGTTCCC+TGG | + | chr8_1:29112938-29112957 | Msa1188650:CDS | 55.0% | |
| TGATCGATCTAGCGCTCCCA+AGG | + | chr8_1:29113712-29113731 | Msa1188650:CDS | 55.0% | |
| CCGGAGATCCTACAGTCCTT+GGG | - | chr8_1:29113731-29113750 | None:intergenic | 55.0% | |
| CCCAAGGACTGTAGGATCTC+CGG | + | chr8_1:29113728-29113747 | Msa1188650:CDS | 55.0% | |
| ACCGGAGATCCTACAGTCCT+TGG | - | chr8_1:29113732-29113751 | None:intergenic | 55.0% | |
| AGGACTGTAGGATCTCCGGT+TGG | + | chr8_1:29113732-29113751 | Msa1188650:CDS | 55.0% | |
| GACACGGTGGATGCCGACAT+CGG | - | chr8_1:29109251-29109270 | None:intergenic | 60.0% | |
| GTTCGCCGCCGTGATTGACA+CGG | - | chr8_1:29109267-29109286 | None:intergenic | 60.0% | |
| GACCGTTACCTGCGGTGGAA+GGG | - | chr8_1:29109403-29109422 | None:intergenic | 60.0% | |
| CAACAAAGAGGGTCGCCGGT+GGG | + | chr8_1:29109483-29109502 | Msa1188650:CDS | 60.0% | |
| AACAAAGAGGGTCGCCGGTG+GGG | + | chr8_1:29109484-29109503 | Msa1188650:CDS | 60.0% | |
| ACGCGGCGTGTGAGGAAGAA+TGG | + | chr8_1:29109512-29109531 | Msa1188650:CDS | 60.0% | |
| CGGCGTGTGAGGAAGAATGG+TGG | + | chr8_1:29109515-29109534 | Msa1188650:CDS | 60.0% | |
| GGCGAAGATGATGCAGGTGC+AGG | + | chr8_1:29109742-29109761 | Msa1188650:CDS | 60.0% | |
| !! | GCAGGTGCAGGTTGATGTGG+TGG | + | chr8_1:29109754-29109773 | Msa1188650:CDS | 60.0% |
| GGGAATGGGTATGAGGGTGG+TGG | + | chr8_1:29109983-29110002 | Msa1188650:CDS | 60.0% | |
| !! | ATGCTGCTGATGGGCTTGGG+AGG | + | chr8_1:29110062-29110081 | Msa1188650:CDS | 60.0% |
| !! | TGCTGCTGATGGGCTTGGGA+GGG | + | chr8_1:29110063-29110082 | Msa1188650:CDS | 60.0% |
| CTCTTGCAAACGGTGGAGCC+TGG | + | chr8_1:29110095-29110114 | Msa1188650:CDS | 60.0% | |
| TGGCCTTCTCTAGCTGGGGT+TGG | + | chr8_1:29112911-29112930 | Msa1188650:CDS | 60.0% | |
| CTAGCGCTCCCAAGGACTGT+AGG | + | chr8_1:29113720-29113739 | Msa1188650:CDS | 60.0% | |
| ! | TAGGATCTCCGGTTGGCTGC+AGG | + | chr8_1:29113739-29113758 | Msa1188650:CDS | 60.0% |
| ! | AGGATCTCCGGTTGGCTGCA+GGG | + | chr8_1:29113740-29113759 | Msa1188650:CDS | 60.0% |
| ATTGCTCCCCTGCAGCCAAC+CGG | - | chr8_1:29113750-29113769 | None:intergenic | 60.0% | |
| TCAATCACGGCGGCGAACCC+AGG | + | chr8_1:29109269-29109288 | Msa1188650:CDS | 65.0% | |
| TGGAGAAGCGGCGACGTCGT+TGG | - | chr8_1:29109357-29109376 | None:intergenic | 65.0% | |
| GCCGCTTCTCCAAACACCGC+CGG | + | chr8_1:29109365-29109384 | Msa1188650:CDS | 65.0% | |
| GCCGGCGGTGTTTGGAGAAG+CGG | - | chr8_1:29109369-29109388 | None:intergenic | 65.0% | |
| TCTCCAAACACCGCCGGCGA+CGG | + | chr8_1:29109371-29109390 | Msa1188650:CDS | 65.0% | |
| GGAAGGGTTCTTGCCGTCGC+CGG | - | chr8_1:29109387-29109406 | None:intergenic | 65.0% | |
| GGCAAGAACCCTTCCACCGC+AGG | + | chr8_1:29109392-29109411 | Msa1188650:CDS | 65.0% | |
| CGACCGTTACCTGCGGTGGA+AGG | - | chr8_1:29109404-29109423 | None:intergenic | 65.0% | |
| GTCACGACCGTTACCTGCGG+TGG | - | chr8_1:29109408-29109427 | None:intergenic | 65.0% | |
| CCGGCGACCCTCTTTGTTGC+CGG | - | chr8_1:29109482-29109501 | None:intergenic | 65.0% | |
| CCGGCAACAAAGAGGGTCGC+CGG | + | chr8_1:29109479-29109498 | Msa1188650:CDS | 65.0% | |
| GCAACAAAGAGGGTCGCCGG+TGG | + | chr8_1:29109482-29109501 | Msa1188650:CDS | 65.0% | |
| TCGCCGGTGGGGATTCAACG+CGG | + | chr8_1:29109495-29109514 | Msa1188650:CDS | 65.0% | |
| ACGCCGCGTTGAATCCCCAC+CGG | - | chr8_1:29109501-29109520 | None:intergenic | 65.0% | |
| GGGATTCAACGCGGCGTGTG+AGG | + | chr8_1:29109504-29109523 | Msa1188650:CDS | 65.0% | |
| !! | TGCTGATGGGCTTGGGAGGG+TGG | + | chr8_1:29110066-29110085 | Msa1188650:CDS | 65.0% |
| ! | GGATCTCCGGTTGGCTGCAG+GGG | + | chr8_1:29113741-29113760 | Msa1188650:CDS | 65.0% |
| CGCCGCCGTGATTGACACGG+TGG | - | chr8_1:29109264-29109283 | None:intergenic | 70.0% | |
| CGGCGAACCCAGGCACTCGT+CGG | + | chr8_1:29109279-29109298 | Msa1188650:CDS | 70.0% | |
| CGGGTCTCCGACGAGTGCCT+GGG | - | chr8_1:29109289-29109308 | None:intergenic | 70.0% | |
| ACGGGTCTCCGACGAGTGCC+TGG | - | chr8_1:29109290-29109309 | None:intergenic | 70.0% | |
| TTGCCGTCGCCGGCGGTGTT+TGG | - | chr8_1:29109377-29109396 | None:intergenic | 70.0% | |
| AGGGTTCTTGCCGTCGCCGG+CGG | - | chr8_1:29109384-29109403 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 29109092 | 29113996 | 29109092 | ID=Msa1188650;Name=Msa1188650 |
| chr8_1 | mRNA | 29109092 | 29113996 | 29109092 | ID=Msa1188650-mRNA-1;Parent=Msa1188650;Name=Msa1188650-mRNA-1;_AED=0.10;_eAED=0.12;_QI=159|0|0.2|0.6|1|1|5|0|488 |
| chr8_1 | exon | 29109092 | 29110333 | 29109092 | ID=Msa1188650-mRNA-1:exon:10200;Parent=Msa1188650-mRNA-1 |
| chr8_1 | exon | 29112679 | 29112759 | 29112679 | ID=Msa1188650-mRNA-1:exon:10201;Parent=Msa1188650-mRNA-1 |
| chr8_1 | exon | 29112851 | 29112973 | 29112851 | ID=Msa1188650-mRNA-1:exon:10202;Parent=Msa1188650-mRNA-1 |
| chr8_1 | exon | 29113701 | 29113856 | 29113701 | ID=Msa1188650-mRNA-1:exon:10203;Parent=Msa1188650-mRNA-1 |
| chr8_1 | exon | 29113973 | 29113996 | 29113973 | ID=Msa1188650-mRNA-1:exon:10204;Parent=Msa1188650-mRNA-1 |
| chr8_1 | five_prime_UTR | 29109092 | 29109250 | 29109092 | ID=Msa1188650-mRNA-1:five_prime_utr;Parent=Msa1188650-mRNA-1 |
| chr8_1 | CDS | 29109251 | 29110333 | 29109251 | ID=Msa1188650-mRNA-1:cds;Parent=Msa1188650-mRNA-1 |
| chr8_1 | CDS | 29112679 | 29112759 | 29112679 | ID=Msa1188650-mRNA-1:cds;Parent=Msa1188650-mRNA-1 |
| chr8_1 | CDS | 29112851 | 29112973 | 29112851 | ID=Msa1188650-mRNA-1:cds;Parent=Msa1188650-mRNA-1 |
| chr8_1 | CDS | 29113701 | 29113856 | 29113701 | ID=Msa1188650-mRNA-1:cds;Parent=Msa1188650-mRNA-1 |
| chr8_1 | CDS | 29113973 | 29113996 | 29113973 | ID=Msa1188650-mRNA-1:cds;Parent=Msa1188650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
