AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0504780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0504780 MtrunA17_Chr3g0102381 94.915 59 3 0 38 96 1 59 3.85e-36 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 343 sgRNAs with CRISPR-Local

Find 528 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATGAATCTAGGGTTTC+TGG 0.047637 3_4:+49823319 Msa0504780:five_prime_UTR
TCATCACGGTGCTTTCTTTC+TGG 0.103454 3_4:-49824855 None:intergenic
CACCAGCTTCATCCATTATT+AGG 0.157055 3_4:-49823030 None:intergenic
GTACCGGTGGTGGTGGAATT+AGG 0.159122 3_4:+49823389 Msa0504780:five_prime_UTR
TGCTTTCTTTCTGGCCATTC+AGG 0.192105 3_4:-49824846 None:intergenic
CCACCCCATCCGCCCATATT+TGG 0.212636 3_4:-49824591 None:intergenic
TTCACTCATCTAATCTTCTT+TGG 0.224618 3_4:-49822814 None:intergenic
ACCATTCATCCCTTCCTTAC+AGG 0.228120 3_4:-49823893 None:intergenic
GGGTTTAGAGGAGGGAATTC+TGG 0.238887 3_4:+49823355 Msa0504780:five_prime_UTR
ATGAATGGTCATTCGTTTAA+TGG 0.249585 3_4:+49823907 Msa0504780:five_prime_UTR
CTGTCAATCCGATGAGAAAT+AGG 0.252618 3_4:+49824217 Msa0504780:five_prime_UTR
GTTGGTGGTGGAGGAGGTGG+TGG 0.255621 3_4:+49823694 Msa0504780:five_prime_UTR
GGGTATGGATGGTCCTAATA+TGG 0.258478 3_4:+49824554 Msa0504780:five_prime_UTR
GGTGTTGGTGGTGGAGGAGG+TGG 0.269109 3_4:+49823691 Msa0504780:five_prime_UTR
CGGTATACTAACTAACTGTT+AGG 0.274383 3_4:-49827674 None:intergenic
CAGGATTTGTCATGGTTGTT+TGG 0.277956 3_4:+49825207 Msa0504780:exon
GTGAGGAACCTGGTGGTGGC+AGG 0.283008 3_4:+49824613 Msa0504780:five_prime_UTR
GGAGGTGTTGGTGGTGGAGG+AGG 0.283109 3_4:+49823688 Msa0504780:five_prime_UTR
AGGTCAAAAGATGCTGATTA+TGG 0.291684 3_4:+49825116 Msa0504780:five_prime_UTR
GAACCTGGTGGTGGCAGGGC+TGG 0.298264 3_4:+49824618 Msa0504780:five_prime_UTR
ACCAGCTTCATCCATTATTA+GGG 0.300933 3_4:-49823029 None:intergenic
AATAATAACAATAGAGGTTA+TGG 0.305047 3_4:+49824144 Msa0504780:five_prime_UTR
TACATCATAATACACAAAAT+TGG 0.306899 3_4:-49827707 None:intergenic
AGGATTTGTCATGGTTGTTT+GGG 0.311064 3_4:+49825208 Msa0504780:exon
TTCTGCCACCCAGCTCTATC+AGG 0.319704 3_4:-49824696 None:intergenic
AGGTTATGGAAGAGGTAATT+GGG 0.321683 3_4:+49824158 Msa0504780:five_prime_UTR
GTGGAGGGGTTAATCTTAAT+AGG 0.323062 3_4:+49823605 Msa0504780:five_prime_UTR
GAATGATGGTGTTGGAGTTC+AGG 0.324217 3_4:+49823468 Msa0504780:five_prime_UTR
TCCTCAGCAAATTATGAATC+AGG 0.325362 3_4:+49824326 Msa0504780:five_prime_UTR
GAGGTTATGGAAGAGGTAAT+TGG 0.327457 3_4:+49824157 Msa0504780:five_prime_UTR
CTTAATAGGGTTGGAGGAAA+TGG 0.331429 3_4:+49823619 Msa0504780:five_prime_UTR
ATAGGTGGTAGAGGTATAAT+TGG 0.332537 3_4:+49824249 Msa0504780:five_prime_UTR
AGTGGTGTTGTTGGTGGTGG+AGG 0.332763 3_4:+49823589 Msa0504780:five_prime_UTR
AGGAAGTACTTTGTTATTTG+TGG 0.333873 3_4:+49823717 Msa0504780:five_prime_UTR
TCCGGCCACATTCCCATATT+AGG 0.337509 3_4:-49824567 None:intergenic
CAACTCTCAATGTAAGAAAA+AGG 0.342603 3_4:-49827407 None:intergenic
GCAGCTGCTCAACAACTTCT+AGG 0.342971 3_4:-49825253 None:intergenic
TGGGCGAAGCTCAGAATAAT+AGG 0.346521 3_4:+49823977 Msa0504780:five_prime_UTR
TGGTCCGGCACCTCCATTCT+CGG 0.347346 3_4:+49824410 Msa0504780:five_prime_UTR
AATGTGGCCGGATCCAAATA+TGG 0.348257 3_4:+49824578 Msa0504780:five_prime_UTR
TCAATCGGGTTCTGGTGTTC+AGG 0.352631 3_4:+49823249 Msa0504780:five_prime_UTR
ACAAAATTGGCATGCTCAAC+CGG 0.355849 3_4:-49827694 None:intergenic
GGTGGAATTAGGGTTGAATT+AGG 0.356484 3_4:+49823400 Msa0504780:five_prime_UTR
GGGATGATGCCTCAATTTCC+TGG 0.360064 3_4:+49824432 Msa0504780:five_prime_UTR
TACCGGTGGTGGTGGAATTA+GGG 0.363590 3_4:+49823390 Msa0504780:five_prime_UTR
GGTAATGGTGGAAATGGATT+TGG 0.364183 3_4:+49824270 Msa0504780:five_prime_UTR
ACCAATGTTGTTGATGTAAT+GGG 0.366164 3_4:+49827494 Msa0504780:three_prime_UTR
GTGATGAATCTAGGGTTTCT+GGG 0.368364 3_4:+49823320 Msa0504780:five_prime_UTR
GGTGGTGGAGGAGGTGGTGG+AGG 0.371298 3_4:+49823697 Msa0504780:five_prime_UTR
TTGAGGAAGAACGATGATTC+AGG 0.371350 3_4:+49823193 Msa0504780:five_prime_UTR
ATTGGTGGTGGAGGAGGTGA+AGG 0.371730 3_4:+49823664 Msa0504780:five_prime_UTR
ATAATTGGTAATGGTGGAAA+TGG 0.371958 3_4:+49824264 Msa0504780:five_prime_UTR
GTTGGAGGTGTTGGTTTGCC+TGG 0.373316 3_4:+49824456 Msa0504780:five_prime_UTR
GGAAATAATGTTATTGCTAT+TGG 0.375081 3_4:+49823646 Msa0504780:five_prime_UTR
ATCGTGAGCGGGACAGATAC+AGG 0.379036 3_4:+49824958 Msa0504780:five_prime_UTR
AAGAAGGTTCAATCGGGTTC+TGG 0.380389 3_4:+49823241 Msa0504780:five_prime_UTR
ACTTGGCTCTTCAATATTGA+TGG 0.382023 3_4:-49827375 None:intergenic
GTTGAATTAGGTCAAGCATC+TGG 0.388751 3_4:+49823412 Msa0504780:five_prime_UTR
GAAGCTGAGTTATGCAAGTA+TGG 0.393302 3_4:+49823775 Msa0504780:five_prime_UTR
ATGGGTAGAATGGCAGGCTT+TGG 0.395593 3_4:+49824375 Msa0504780:five_prime_UTR
TGAATGGTCATTCGTTTAAT+GGG 0.398915 3_4:+49823908 Msa0504780:five_prime_UTR
GCATGATGAGGAGTGGGAGC+GGG 0.399423 3_4:+49825034 Msa0504780:five_prime_UTR
TGTTCCAGTTGCATCTTGTC+AGG 0.399601 3_4:+49825289 Msa0504780:CDS
GTGGTGTTGTTGGTGGTGGA+GGG 0.400261 3_4:+49823590 Msa0504780:five_prime_UTR
TTTCAGAATCAAGGGTTTAG+AGG 0.400665 3_4:+49823343 Msa0504780:five_prime_UTR
GTGGGGTTAACCCGGGAAGA+AGG 0.401244 3_4:+49824028 Msa0504780:five_prime_UTR
GGGACAGATACAGGGAAGAT+AGG 0.403470 3_4:+49824967 Msa0504780:five_prime_UTR
AGAAATAGGGGTGGTGGGAT+AGG 0.404535 3_4:+49824231 Msa0504780:five_prime_UTR
AACCAATGTTGTTGATGTAA+TGG 0.405200 3_4:+49827493 Msa0504780:three_prime_UTR
TGTCAATCCGATGAGAAATA+GGG 0.407839 3_4:+49824218 Msa0504780:five_prime_UTR
TAACCCCACCACCGGCAGTT+TGG 0.409185 3_4:-49824014 None:intergenic
TTTCCTGGTGTTGGAGGTGT+TGG 0.411185 3_4:+49824447 Msa0504780:five_prime_UTR
AATGGATTTGGACAGGGTAT+TGG 0.411699 3_4:+49824282 Msa0504780:five_prime_UTR
AGGACCATCCATACCCGATT+GGG 0.412131 3_4:-49824547 None:intergenic
TGAACAACTTCTCACACGTT+AGG 0.415605 3_4:+49822833 Msa0504780:five_prime_UTR
TTGTGGGTGATTTGCATTGG+TGG 0.416148 3_4:+49823734 Msa0504780:five_prime_UTR
TGATGGGGTTGATGAGAAGA+AGG 0.416268 3_4:+49823225 Msa0504780:five_prime_UTR
TAAACCACTGGGTTGCTTTG+AGG 0.417950 3_4:+49827344 Msa0504780:CDS
GGTGGTGGAGGAGGTGAAGG+GGG 0.418334 3_4:+49823667 Msa0504780:five_prime_UTR
CACTCCTGACAAGATGCAAC+TGG 0.421248 3_4:-49825293 None:intergenic
GATTCAGGTGGTAGAATTGA+TGG 0.421372 3_4:+49823208 Msa0504780:five_prime_UTR
GGGGTTAACCCGGGAAGAAG+GGG 0.421478 3_4:+49824030 Msa0504780:five_prime_UTR
TGCCGGTGGTGGGGTTAACC+CGG 0.424708 3_4:+49824020 Msa0504780:five_prime_UTR
AGGATGAGGAACACCATTCT+AGG 0.426512 3_4:+49825096 Msa0504780:five_prime_UTR
ATCAAAACGGCGTCGTTGAA+AGG 0.427460 3_4:-49822944 None:intergenic
GCTGATGTGGGAGCTAAGCC+TGG 0.428646 3_4:+49824057 Msa0504780:five_prime_UTR
TTGGTGGTGGTGATGAATCT+AGG 0.429880 3_4:+49823311 Msa0504780:five_prime_UTR
GATCCGGTGGCTGGTGTTGT+TGG 0.430804 3_4:+49823271 Msa0504780:five_prime_UTR
CTCAACCTGACAATACCCTT+TGG 0.430864 3_4:-49823845 None:intergenic
GTTTCTGGGTTTCAGAATCA+AGG 0.432968 3_4:+49823334 Msa0504780:five_prime_UTR
GGTCCGGCACCTCCATTCTC+GGG 0.437687 3_4:+49824411 Msa0504780:five_prime_UTR
ATGCCTCAATTTCCTGGTGT+TGG 0.438968 3_4:+49824438 Msa0504780:five_prime_UTR
ATAGCAATAACATTATTTCC+AGG 0.442010 3_4:-49823643 None:intergenic
AATGATGGTGTTGGAGTTCA+GGG 0.442743 3_4:+49823469 Msa0504780:five_prime_UTR
TGGTGGTGGAGGAGGTGAAG+GGG 0.443449 3_4:+49823666 Msa0504780:five_prime_UTR
CCAGCTTTACAGTAATTGAA+TGG 0.444719 3_4:-49827739 None:intergenic
AATTGTTTGAATGATGTACT+AGG 0.446159 3_4:+49827561 Msa0504780:three_prime_UTR
CCTCAATTTCCTGGTGTTGG+AGG 0.446456 3_4:+49824441 Msa0504780:five_prime_UTR
GGTGGTGAGGAACCTGGTGG+TGG 0.446918 3_4:+49824609 Msa0504780:five_prime_UTR
CCTCATCATGCTCTGGTTCA+CGG 0.446985 3_4:-49825022 None:intergenic
GTTGGATCGGGTACCGGTGG+TGG 0.448718 3_4:+49823379 Msa0504780:five_prime_UTR
TCAAAACGGCGTCGTTGAAA+GGG 0.451270 3_4:-49822943 None:intergenic
TGAGGAACCTGGTGGTGGCA+GGG 0.451354 3_4:+49824614 Msa0504780:five_prime_UTR
GGTAATTATCAAGGTGGAGA+TGG 0.452637 3_4:+49824102 Msa0504780:five_prime_UTR
TGGTGGAAATGGATTTGGAC+AGG 0.453155 3_4:+49824275 Msa0504780:five_prime_UTR
GGCTTAGCTCCCACATCAGC+AGG 0.453413 3_4:-49824054 None:intergenic
TCAGAATAATAGGAATCAAC+AGG 0.455870 3_4:+49823987 Msa0504780:five_prime_UTR
GTACCTTCGCTCAGAAGAAC+CGG 0.456411 3_4:-49824760 None:intergenic
GGGATGCCTGTGAATGGAAT+GGG 0.457540 3_4:+49824516 Msa0504780:five_prime_UTR
TCCCACTCCTCATCATGCTC+TGG 0.460102 3_4:-49825029 None:intergenic
GGGTTCTGGTGTTCAGGATC+CGG 0.460531 3_4:+49823255 Msa0504780:five_prime_UTR
ATTCAGGTGGTAGAATTGAT+GGG 0.461468 3_4:+49823209 Msa0504780:five_prime_UTR
GGTAGAATGGCAGGCTTTGG+AGG 0.461925 3_4:+49824378 Msa0504780:five_prime_UTR
ATATGCTGCAACTGCCTGTA+AGG 0.462613 3_4:+49823879 Msa0504780:five_prime_UTR
GGTCCCATGGGTAGAATGGC+AGG 0.463195 3_4:+49824369 Msa0504780:five_prime_UTR
TCCTGCATTTGGTGGTCCCA+TGG 0.463497 3_4:+49824356 Msa0504780:five_prime_UTR
ATTGCTATTGGTGGTGGAGG+AGG 0.463547 3_4:+49823658 Msa0504780:five_prime_UTR
GGGAATTCTGGAGTTGGATC+GGG 0.463677 3_4:+49823367 Msa0504780:five_prime_UTR
CTATTTCTCATCGGATTGAC+AGG 0.464317 3_4:-49824216 None:intergenic
AGAGGAGGGAATTCTGGAGT+TGG 0.464640 3_4:+49823361 Msa0504780:five_prime_UTR
CAACAACATGGTGGTGTTGT+TGG 0.464811 3_4:+49823538 Msa0504780:five_prime_UTR
GGGCTGGAGAGTCAAGTTAT+GGG 0.464924 3_4:+49824634 Msa0504780:five_prime_UTR
TGATGAGAAGAAGGTTCAAT+CGG 0.466730 3_4:+49823234 Msa0504780:five_prime_UTR
GAACAACTTCTCACACGTTA+GGG 0.467739 3_4:+49822834 Msa0504780:five_prime_UTR
AGAACCGGACCAGTCCCTTT+CGG 0.468266 3_4:-49824745 None:intergenic
GTGAACCAAACTGCCGGTGG+TGG 0.468522 3_4:+49824009 Msa0504780:five_prime_UTR
GATGATGCCCCAATCGGGTA+TGG 0.468653 3_4:+49824539 Msa0504780:five_prime_UTR
AACAATAATAATAACAATAG+AGG 0.469203 3_4:+49824138 Msa0504780:five_prime_UTR
TACAGGGATGATAGAGATCA+AGG 0.470663 3_4:+49824780 Msa0504780:five_prime_UTR
CCAAGTGGTGTTGTTGGTGG+TGG 0.473693 3_4:+49823586 Msa0504780:five_prime_UTR
ACAGATATGCTGATCATCAT+AGG 0.474123 3_4:+49824991 Msa0504780:five_prime_UTR
AGCATGATGAGGAGTGGGAG+CGG 0.475393 3_4:+49825033 Msa0504780:five_prime_UTR
GGATGGGGTGGTGAGGAACC+TGG 0.475809 3_4:+49824603 Msa0504780:five_prime_UTR
TGAGGCATCATCCCCGAGAA+TGG 0.475990 3_4:-49824423 None:intergenic
GGATCGGGTACCGGTGGTGG+TGG 0.476347 3_4:+49823382 Msa0504780:five_prime_UTR
CCAAATATGGGCGGATGGGG+TGG 0.477803 3_4:+49824591 Msa0504780:five_prime_UTR
ACGATCACGTGACCGTGGTC+GGG 0.478106 3_4:+49824896 Msa0504780:five_prime_UTR
CTCGAGATCGTGAGCGCGAA+AGG 0.479654 3_4:+49824925 Msa0504780:five_prime_UTR
GGATCCAAATATGGGCGGAT+GGG 0.480574 3_4:+49824587 Msa0504780:five_prime_UTR
TGGAGGCTATCCCGGTGGTC+CGG 0.480694 3_4:+49824395 Msa0504780:five_prime_UTR
TGGGGTTAACCCGGGAAGAA+GGG 0.481851 3_4:+49824029 Msa0504780:five_prime_UTR
CCATTCAATTACTGTAAAGC+TGG 0.482158 3_4:+49827739 Msa0504780:three_prime_UTR
CAAGTTCCAAGTGGTGTTGT+TGG 0.482440 3_4:+49823580 Msa0504780:five_prime_UTR
GATCCAAATATGGGCGGATG+GGG 0.482985 3_4:+49824588 Msa0504780:five_prime_UTR
GGTAGAGGTATAATTGGTAA+TGG 0.483294 3_4:+49824255 Msa0504780:five_prime_UTR
CATCCGCCCATATTTGGATC+CGG 0.484005 3_4:-49824585 None:intergenic
GGTGTTCAGGATCCGGTGGC+TGG 0.484127 3_4:+49823262 Msa0504780:five_prime_UTR
GAATGGAGGTGCCGGACCAC+CGG 0.484600 3_4:-49824406 None:intergenic
TCTCCAGCCCTGCCACCACC+AGG 0.485249 3_4:-49824621 None:intergenic
GTGGACTACTGATGCTGAGC+TGG 0.485315 3_4:+49823753 Msa0504780:five_prime_UTR
TGGAGGGGTTAATCTTAATA+GGG 0.485764 3_4:+49823606 Msa0504780:five_prime_UTR
GGTGGTAGTAATATTGCAAC+TGG 0.487592 3_4:+49824078 Msa0504780:five_prime_UTR
GCTGAGGATGCATCATCGGC+GGG 0.488538 3_4:-49824311 None:intergenic
GGAAGTACTTTGTTATTTGT+GGG 0.488708 3_4:+49823718 Msa0504780:five_prime_UTR
AGGGCTGGAGAGTCAAGTTA+TGG 0.489172 3_4:+49824633 Msa0504780:five_prime_UTR
AACAATAGAGGTTATGGAAG+AGG 0.489326 3_4:+49824150 Msa0504780:five_prime_UTR
GCAGCATCAGACCATCAGTA+TGG 0.490533 3_4:+49824663 Msa0504780:five_prime_UTR
CTGGGTGGCAGAATAATATG+AGG 0.491968 3_4:+49824706 Msa0504780:five_prime_UTR
GCCTGTAAGGAAGGGATGAA+TGG 0.495821 3_4:+49823892 Msa0504780:five_prime_UTR
GGGTTAACCCGGGAAGAAGG+GGG 0.495920 3_4:+49824031 Msa0504780:five_prime_UTR
TGGTGGTCCCATGGGTAGAA+TGG 0.496209 3_4:+49824365 Msa0504780:five_prime_UTR
GGAAGAGGTAATTGGGGTAG+AGG 0.496528 3_4:+49824165 Msa0504780:five_prime_UTR
AGGGAATTCTGGAGTTGGAT+CGG 0.496738 3_4:+49823366 Msa0504780:five_prime_UTR
GAGGGAGTGAAGAGTGTTGG+TGG 0.496817 3_4:+49823295 Msa0504780:five_prime_UTR
GGGGTTAATCTTAATAGGGT+TGG 0.497622 3_4:+49823610 Msa0504780:five_prime_UTR
GTTATTGCTATTGGTGGTGG+AGG 0.497635 3_4:+49823655 Msa0504780:five_prime_UTR
TAGAGGGAACAATCCTGGTA+TGG 0.498649 3_4:+49824182 Msa0504780:five_prime_UTR
CATGATGAGGAGTGGGAGCG+GGG 0.499344 3_4:+49825035 Msa0504780:five_prime_UTR
ATGGATGAAGCTGGTGAAAG+TGG 0.500174 3_4:+49823037 Msa0504780:five_prime_UTR
TGGTGTTGTTGGTGGTGGAG+GGG 0.502558 3_4:+49823591 Msa0504780:five_prime_UTR
GTGGCTGGTGTTGTTGGTGA+GGG 0.503570 3_4:+49823277 Msa0504780:five_prime_UTR
GTTCTTCTGAGCGAAGGTAC+AGG 0.505164 3_4:+49824763 Msa0504780:five_prime_UTR
AACGATCACGTGACCGTGGT+CGG 0.505395 3_4:+49824895 Msa0504780:five_prime_UTR
CCGATGAGAAATAGGGGTGG+TGG 0.506509 3_4:+49824225 Msa0504780:five_prime_UTR
GGAAGAGGGATGCCTGTGAA+TGG 0.507911 3_4:+49824510 Msa0504780:five_prime_UTR
GCAGGCTTTGGAGGCTATCC+CGG 0.508698 3_4:+49824387 Msa0504780:five_prime_UTR
ATGTGGCCGGATCCAAATAT+GGG 0.509782 3_4:+49824579 Msa0504780:five_prime_UTR
AATGTTATTGCTATTGGTGG+TGG 0.512566 3_4:+49823652 Msa0504780:five_prime_UTR
TATTTGTGGGTGATTTGCAT+TGG 0.512963 3_4:+49823731 Msa0504780:five_prime_UTR
CAACATTAACATCGTTGTAA+AGG 0.513179 3_4:-49823150 None:intergenic
ATCATCCCCATTCCATTCAC+AGG 0.513647 3_4:-49824522 None:intergenic
TGGCCATTCAGGATCATGTC+CGG 0.514343 3_4:-49824835 None:intergenic
AATGGGGATGATGCCCCAAT+CGG 0.516902 3_4:+49824533 Msa0504780:five_prime_UTR
CCACCACCAACAACACCACT+TGG 0.517634 3_4:-49823586 None:intergenic
TCCCGGGTTAACCCCACCAC+CGG 0.519319 3_4:-49824022 None:intergenic
TGAACCAAACTGCCGGTGGT+GGG 0.519641 3_4:+49824010 Msa0504780:five_prime_UTR
GGTATGGATGGTCCTAATAT+GGG 0.521905 3_4:+49824555 Msa0504780:five_prime_UTR
TGGTGGTGGTGATGAATCTA+GGG 0.524499 3_4:+49823312 Msa0504780:five_prime_UTR
GTTAATCTTAATAGGGTTGG+AGG 0.524976 3_4:+49823613 Msa0504780:five_prime_UTR
CTTTACAACGATGTTAATGT+TGG 0.525709 3_4:+49823151 Msa0504780:five_prime_UTR
TGGGGTAGAGGGAACAATCC+TGG 0.526032 3_4:+49824177 Msa0504780:five_prime_UTR
ATCAAGATTATCACAGGATG+AGG 0.526107 3_4:+49825082 Msa0504780:five_prime_UTR
CCTCCAACACCAGGAAATTG+AGG 0.526290 3_4:-49824441 None:intergenic
ATCCCCGAGAATGGAGGTGC+CGG 0.526530 3_4:-49824414 None:intergenic
GTTCCAAGTGGTGTTGTTGG+TGG 0.526669 3_4:+49823583 Msa0504780:five_prime_UTR
CCTGCATTTGGTGGTCCCAT+GGG 0.526946 3_4:+49824357 Msa0504780:five_prime_UTR
AATGGAGGTGCCGGACCACC+GGG 0.527390 3_4:-49824405 None:intergenic
CTAACAGTTAGTTAGTATAC+CGG 0.527731 3_4:+49827675 Msa0504780:three_prime_UTR
TTGAATTAGGTCAAGCATCT+GGG 0.528023 3_4:+49823413 Msa0504780:five_prime_UTR
TGGGAAATCGAGTGAAATTG+AGG 0.529983 3_4:+49823432 Msa0504780:five_prime_UTR
GCTGCAACTGCCTGTAAGGA+AGG 0.530594 3_4:+49823883 Msa0504780:five_prime_UTR
TGGTGAAAGTGGAGATCCTA+TGG 0.532034 3_4:+49823048 Msa0504780:five_prime_UTR
ATACTGTTCATCTAAACCAC+TGG 0.532755 3_4:+49827332 Msa0504780:CDS
CGGATCCAAATATGGGCGGA+TGG 0.533104 3_4:+49824586 Msa0504780:five_prime_UTR
TCGAGATCGTGAGCGCGAAA+GGG 0.533414 3_4:+49824926 Msa0504780:five_prime_UTR
ATATCTGCTGTAGCTGATGA+TGG 0.533479 3_4:+49823094 Msa0504780:five_prime_UTR
AACCCTAATTCCACCACCAC+CGG 0.533956 3_4:-49823392 None:intergenic
TCTGGAGTTGGATCGGGTAC+CGG 0.533999 3_4:+49823373 Msa0504780:five_prime_UTR
AACGATGTTAATGTTGGTGA+GGG 0.535233 3_4:+49823157 Msa0504780:five_prime_UTR
GGTGGTGGGATAGGTGGTAG+AGG 0.535372 3_4:+49824240 Msa0504780:five_prime_UTR
AATCCTGGTATGGGTGGTAG+AGG 0.535904 3_4:+49824192 Msa0504780:five_prime_UTR
AGATACAACTAAACTGGAGA+TGG 0.536528 3_4:-49827829 None:intergenic
AGAGGTATAATTGGTAATGG+TGG 0.538059 3_4:+49824258 Msa0504780:five_prime_UTR
AGAGGGAACAATCCTGGTAT+GGG 0.539437 3_4:+49824183 Msa0504780:five_prime_UTR
TCCTAATATGGGAATGTGGC+CGG 0.540113 3_4:+49824566 Msa0504780:five_prime_UTR
GTAATACTTTCCCTTGAGGA+AGG 0.540469 3_4:+49825163 Msa0504780:five_prime_UTR
ATGGGGATGATGCCCCAATC+GGG 0.540485 3_4:+49824534 Msa0504780:five_prime_UTR
AGAATCAAGGGTTTAGAGGA+GGG 0.540567 3_4:+49823347 Msa0504780:five_prime_UTR
AGGGATGCCTGTGAATGGAA+TGG 0.540944 3_4:+49824515 Msa0504780:five_prime_UTR
TTAACATGAGGTGCTACTCC+AGG 0.541597 3_4:-49824474 None:intergenic
GGACAGATACAGGGAAGATA+GGG 0.545324 3_4:+49824968 Msa0504780:five_prime_UTR
GTAATTATCAAGGTGGAGAT+GGG 0.545329 3_4:+49824103 Msa0504780:five_prime_UTR
AAACCAACACCTCCAACACC+AGG 0.548121 3_4:-49824450 None:intergenic
CAACGATGTTAATGTTGGTG+AGG 0.548295 3_4:+49823156 Msa0504780:five_prime_UTR
GCCCATTACATCAACAACAT+TGG 0.548356 3_4:-49827495 None:intergenic
GGTTATGGAAGAGGTAATTG+GGG 0.551409 3_4:+49824159 Msa0504780:five_prime_UTR
AATAGGGGTGGTGGGATAGG+TGG 0.551960 3_4:+49824234 Msa0504780:five_prime_UTR
GATGAAATTAAAGATCAAAA+CGG 0.555618 3_4:-49822957 None:intergenic
ATAGAGGATCCGAAAGGGAC+TGG 0.556094 3_4:+49824736 Msa0504780:five_prime_UTR
CAGAATCAAGGGTTTAGAGG+AGG 0.556931 3_4:+49823346 Msa0504780:five_prime_UTR
GAAGAGGTAATTGGGGTAGA+GGG 0.557497 3_4:+49824166 Msa0504780:five_prime_UTR
ATTTGCTGAGGATGCATCAT+CGG 0.560332 3_4:-49824315 None:intergenic
CAGCAGATATAGCTTCGTTA+CGG 0.560404 3_4:-49823081 None:intergenic
CCCATGGGACCACCAAATGC+AGG 0.560887 3_4:-49824357 None:intergenic
ACCCTAATAATGGATGAAGC+TGG 0.561656 3_4:+49823028 Msa0504780:five_prime_UTR
TATGGGCGGATGGGGTGGTG+AGG 0.561796 3_4:+49824596 Msa0504780:five_prime_UTR
ATGCCCCAATCGGGTATGGA+TGG 0.561899 3_4:+49824543 Msa0504780:five_prime_UTR
TTGAAACTAACCATTTCCAT+AGG 0.562396 3_4:-49825326 None:intergenic
GCAACTGGCGGTAATTATCA+AGG 0.562883 3_4:+49824093 Msa0504780:five_prime_UTR
AAAGCCTGCCATTCTACCCA+TGG 0.563042 3_4:-49824373 None:intergenic
GAAATCCAAAGGGTATTGTC+AGG 0.563157 3_4:+49823840 Msa0504780:five_prime_UTR
TTGGTGGTGGAGGAGGTGAA+GGG 0.563645 3_4:+49823665 Msa0504780:five_prime_UTR
ATGCCGGACATGATCCTGAA+TGG 0.563683 3_4:+49824832 Msa0504780:five_prime_UTR
TAGGACCATCCATACCCGAT+TGG 0.564509 3_4:-49824548 None:intergenic
TTTCTGGGTTTCAGAATCAA+GGG 0.564798 3_4:+49823335 Msa0504780:five_prime_UTR
GAACCAAACTGCCGGTGGTG+GGG 0.566772 3_4:+49824011 Msa0504780:five_prime_UTR
AGAGGTGTGAATGATGGTGT+TGG 0.567936 3_4:+49823460 Msa0504780:five_prime_UTR
ACCAGAGCATGATGAGGAGT+GGG 0.568730 3_4:+49825028 Msa0504780:five_prime_UTR
GGTGAGGGAGTGAAGAGTGT+TGG 0.568963 3_4:+49823292 Msa0504780:five_prime_UTR
AAGATGCTGATTATGGAAAG+AGG 0.570662 3_4:+49825123 Msa0504780:five_prime_UTR
ATGATGAGGAGTGGGAGCGG+GGG 0.571157 3_4:+49825036 Msa0504780:five_prime_UTR
AATAATGTTATTGCTATTGG+TGG 0.571653 3_4:+49823649 Msa0504780:five_prime_UTR
GGTATACTAACTAACTGTTA+GGG 0.572693 3_4:-49827673 None:intergenic
GAGGTGAATCCTGATAGAGC+TGG 0.572872 3_4:+49824687 Msa0504780:five_prime_UTR
CCCTGATTCATAATTTGCTG+AGG 0.573148 3_4:-49824327 None:intergenic
GACGCAAAAGCAACAACACA+CGG 0.573917 3_4:-49823934 None:intergenic
GGATCCGAAAGGGACTGGTC+CGG 0.574149 3_4:+49824741 Msa0504780:five_prime_UTR
TGGGGTGGTGAGGAACCTGG+TGG 0.574865 3_4:+49824606 Msa0504780:five_prime_UTR
ATGGACAAGTGAAGGAGGTG+AGG 0.575630 3_4:+49823794 Msa0504780:five_prime_UTR
AAAAGATAGAGGATCCGAAA+GGG 0.575969 3_4:+49824731 Msa0504780:five_prime_UTR
TAATACTTTCCCTTGAGGAA+GGG 0.576745 3_4:+49825164 Msa0504780:five_prime_UTR
TTCTTCTGAGCGAAGGTACA+GGG 0.576817 3_4:+49824764 Msa0504780:five_prime_UTR
GATGAGAAGAAGGTTCAATC+GGG 0.576960 3_4:+49823235 Msa0504780:five_prime_UTR
CCACCACCCCTATTTCTCAT+CGG 0.577429 3_4:-49824225 None:intergenic
GCCGGTGGTGGGGTTAACCC+GGG 0.577492 3_4:+49824021 Msa0504780:five_prime_UTR
AAGCTAGTGGGAAATCCAAA+GGG 0.577942 3_4:+49823830 Msa0504780:five_prime_UTR
CCTCAGCAAATTATGAATCA+GGG 0.578716 3_4:+49824327 Msa0504780:five_prime_UTR
CAGTAAATCAAGATTATCAC+AGG 0.578787 3_4:+49825076 Msa0504780:five_prime_UTR
TTCTGGTGTTCAGGATCCGG+TGG 0.581128 3_4:+49823258 Msa0504780:five_prime_UTR
GGAGTTGGATCGGGTACCGG+TGG 0.581965 3_4:+49823376 Msa0504780:five_prime_UTR
CTGATTATGGAAAGAGGAGG+CGG 0.582435 3_4:+49825129 Msa0504780:five_prime_UTR
AACCAGAGCATGATGAGGAG+TGG 0.583423 3_4:+49825027 Msa0504780:five_prime_UTR
TGTTGTTGGAAACGATGGGT+TGG 0.583906 3_4:+49823552 Msa0504780:five_prime_UTR
GGTGGCTGGTGTTGTTGGTG+AGG 0.585170 3_4:+49823276 Msa0504780:five_prime_UTR
GAGAAGAAGAGTCAGAGAGA+AGG 0.585616 3_4:-49822861 None:intergenic
CGATGAGAAATAGGGGTGGT+GGG 0.587657 3_4:+49824226 Msa0504780:five_prime_UTR
TCACCAACAACACCAGCCAC+CGG 0.589770 3_4:-49823274 None:intergenic
GGTCCTCTACCACCCATACC+AGG 0.592678 3_4:-49824195 None:intergenic
TGCTGAGGATGCATCATCGG+CGG 0.595650 3_4:-49824312 None:intergenic
TTACGGTGGAACTGATCCAT+AGG 0.596056 3_4:-49823064 None:intergenic
CAGCAGCAACAGCAACAACA+TGG 0.597561 3_4:+49823526 Msa0504780:five_prime_UTR
ATGCAAGTATGGACAAGTGA+AGG 0.598593 3_4:+49823786 Msa0504780:five_prime_UTR
CTGCTCAACAACTTCTAGGT+CGG 0.598668 3_4:-49825249 None:intergenic
CAACAGGTGAACCAAACTGC+CGG 0.599970 3_4:+49824003 Msa0504780:five_prime_UTR
GAACAGAGAGGTGTGAATGA+TGG 0.600685 3_4:+49823454 Msa0504780:five_prime_UTR
AAAGCTAGTGGGAAATCCAA+AGG 0.600695 3_4:+49823829 Msa0504780:five_prime_UTR
GGTGGTGTTGTTGGAAACGA+TGG 0.604505 3_4:+49823547 Msa0504780:five_prime_UTR
GTCCGGCACCTCCATTCTCG+GGG 0.604768 3_4:+49824412 Msa0504780:five_prime_UTR
CTGCAACTGCCTGTAAGGAA+GGG 0.606830 3_4:+49823884 Msa0504780:five_prime_UTR
GGAGTGAAGAGTGTTGGTGG+TGG 0.607165 3_4:+49823298 Msa0504780:five_prime_UTR
GATTCACCTCACCATACTGA+TGG 0.608524 3_4:-49824674 None:intergenic
CGAGATCGTGAGCGCGAAAG+GGG 0.610782 3_4:+49824927 Msa0504780:five_prime_UTR
GGTGGAAATGGATTTGGACA+GGG 0.612223 3_4:+49824276 Msa0504780:five_prime_UTR
CTCAACAACTTCTAGGTCGG+AGG 0.612813 3_4:-49825246 None:intergenic
CAGATATAGCTTCGTTACGG+TGG 0.617616 3_4:-49823078 None:intergenic
AAGCCTGCCATTCTACCCAT+GGG 0.620243 3_4:-49824372 None:intergenic
AGATCGTGAGCGCGAAAGGG+GGG 0.621518 3_4:+49824929 Msa0504780:five_prime_UTR
TCGTGAGCGGGACAGATACA+GGG 0.623073 3_4:+49824959 Msa0504780:five_prime_UTR
TACTGTTCATCTAAACCACT+GGG 0.625118 3_4:+49827333 Msa0504780:CDS
GTCAATCCGATGAGAAATAG+GGG 0.626713 3_4:+49824219 Msa0504780:five_prime_UTR
GGTCCGGTTCTTCTGAGCGA+AGG 0.627233 3_4:+49824757 Msa0504780:five_prime_UTR
CAAGTATGGACAAGTGAAGG+AGG 0.629874 3_4:+49823789 Msa0504780:five_prime_UTR
CCGTGAACCAGAGCATGATG+AGG 0.630498 3_4:+49825022 Msa0504780:five_prime_UTR
ATGGTCATTCGTTTAATGGG+AGG 0.634630 3_4:+49823911 Msa0504780:five_prime_UTR
CTGAGTAATACTTTCCCTTG+AGG 0.635714 3_4:+49825159 Msa0504780:five_prime_UTR
AGGGTTGGAGGAAATGGACC+TGG 0.637061 3_4:+49823625 Msa0504780:five_prime_UTR
GGACCATCCATACCCGATTG+GGG 0.637802 3_4:-49824546 None:intergenic
AGGTGAATCCTGATAGAGCT+GGG 0.637986 3_4:+49824688 Msa0504780:five_prime_UTR
GGGAACAATCCTGGTATGGG+TGG 0.644353 3_4:+49824186 Msa0504780:five_prime_UTR
GGCTTTGGAGGCTATCCCGG+TGG 0.645883 3_4:+49824390 Msa0504780:five_prime_UTR
GGCATCATCCCCGAGAATGG+AGG 0.646866 3_4:-49824420 None:intergenic
CGCGAACGATCACGTGACCG+TGG 0.652791 3_4:+49824891 Msa0504780:five_prime_UTR
GAGATCGTGAGCGCGAAAGG+GGG 0.653665 3_4:+49824928 Msa0504780:five_prime_UTR
AAAGCACCGTGATGATAGAG+AGG 0.654163 3_4:+49824863 Msa0504780:five_prime_UTR
ACAGGGATGATAGAGATCAA+GGG 0.654179 3_4:+49824781 Msa0504780:five_prime_UTR
GTGGTGTTGTTGGAAACGAT+GGG 0.657083 3_4:+49823548 Msa0504780:five_prime_UTR
CTGAGGATGCATCATCGGCG+GGG 0.661013 3_4:-49824310 None:intergenic
ATCAGACCATCAGTATGGTG+AGG 0.661084 3_4:+49824668 Msa0504780:five_prime_UTR
GGCTGGAGAGTCAAGTTATG+GGG 0.661634 3_4:+49824635 Msa0504780:five_prime_UTR
ATGATGGTGTTGGAGTTCAG+GGG 0.663831 3_4:+49823470 Msa0504780:five_prime_UTR
TTCAGGTGGTAGAATTGATG+GGG 0.666666 3_4:+49823210 Msa0504780:five_prime_UTR
TTTATGATGAGAAAGCTAGT+GGG 0.669485 3_4:+49823818 Msa0504780:five_prime_UTR
GAACCACCTCTCTATCATCA+CGG 0.674265 3_4:-49824869 None:intergenic
GTTGCAATATTACTACCACC+AGG 0.675761 3_4:-49824075 None:intergenic
GCACCGTGATGATAGAGAGG+TGG 0.675962 3_4:+49824866 Msa0504780:five_prime_UTR
TGGAGAGTCAAGTTATGGGG+AGG 0.676940 3_4:+49824638 Msa0504780:five_prime_UTR
TGGGTGGCAGAATAATATGA+GGG 0.682915 3_4:+49824707 Msa0504780:five_prime_UTR
TGGCCGGATCCAAATATGGG+CGG 0.683016 3_4:+49824582 Msa0504780:five_prime_UTR
GGATGCCTGTGAATGGAATG+GGG 0.684718 3_4:+49824517 Msa0504780:five_prime_UTR
CAGGTGAACCAAACTGCCGG+TGG 0.686986 3_4:+49824006 Msa0504780:five_prime_UTR
GGTAGTAATATTGCAACTGG+CGG 0.689669 3_4:+49824081 Msa0504780:five_prime_UTR
CAAGGGAAAGTATTACTCAG+AGG 0.692157 3_4:-49825156 None:intergenic
GATGTGGGAGCTAAGCCTGG+TGG 0.699785 3_4:+49824060 Msa0504780:five_prime_UTR
AGGAAGAACGATGATTCAGG+TGG 0.705466 3_4:+49823196 Msa0504780:five_prime_UTR
TGATCCTCAAAGCAACCCAG+TGG 0.709808 3_4:-49827348 None:intergenic
ACTGGCGGTAATTATCAAGG+TGG 0.714404 3_4:+49824096 Msa0504780:five_prime_UTR
ATGGTCCTAATATGGGAATG+TGG 0.718453 3_4:+49824562 Msa0504780:five_prime_UTR
ATGCTGATTATGGAAAGAGG+AGG 0.719817 3_4:+49825126 Msa0504780:five_prime_UTR
CAGCAACAGCAACAACATGG+TGG 0.735849 3_4:+49823529 Msa0504780:five_prime_UTR
AATCCGATGAGAAATAGGGG+TGG 0.741100 3_4:+49824222 Msa0504780:five_prime_UTR
AGTGAAATTGAGGAACAGAG+AGG 0.744021 3_4:+49823442 Msa0504780:five_prime_UTR
TGAATCCTGATAGAGCTGGG+TGG 0.774886 3_4:+49824691 Msa0504780:five_prime_UTR
TTGGTGAGACAAGTTCCAAG+TGG 0.780474 3_4:+49823571 Msa0504780:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAAATCATATTTTAG+CGG - chr3_4:49825716-49825735 None:intergenic 10.0%
!!! AAAAACGATTTTTGATTTTA+GGG - chr3_4:49822995-49823014 None:intergenic 15.0%
!!! AAAAAACGATTTTTGATTTT+AGG - chr3_4:49822996-49823015 None:intergenic 15.0%
!!! AATCAAAAATCGTTTTTTTT+AGG + chr3_4:49822998-49823017 Msa0504780:five_prime_UTR 15.0%
!!! ATCAAAAATCGTTTTTTTTA+GGG + chr3_4:49822999-49823018 Msa0504780:five_prime_UTR 15.0%
!! AACAATAATAATAACAATAG+AGG + chr3_4:49824138-49824157 Msa0504780:five_prime_UTR 15.0%
!!! AATATAATTTTACCGTAAAT+AGG - chr3_4:49826351-49826370 None:intergenic 15.0%
!!! AATATAATTTTACCGTAAAT+AGG - chr3_4:49826351-49826370 None:intergenic 15.0%
!! ATCTTAAAAAAACAAAATCT+GGG - chr3_4:49827040-49827059 None:intergenic 15.0%
!! AATCTTAAAAAAACAAAATC+TGG - chr3_4:49827041-49827060 None:intergenic 15.0%
!! GATGAAATTAAAGATCAAAA+CGG - chr3_4:49822960-49822979 None:intergenic 20.0%
!! AATAATAACAATAGAGGTTA+TGG + chr3_4:49824144-49824163 Msa0504780:five_prime_UTR 20.0%
!! TCAACAAAAAGTAATGTATT+TGG - chr3_4:49825501-49825520 None:intergenic 20.0%
!! TGTTAATTAAGCAAACTAAA+GGG + chr3_4:49826056-49826075 Msa0504780:intron 20.0%
!! TTTGTAATTCCTTGTATTAA+TGG + chr3_4:49826587-49826606 Msa0504780:intron 20.0%
!! TACGGTAAAATTATATTACA+TGG + chr3_4:49826660-49826679 Msa0504780:intron 20.0%
!! TTTGTAATTCCTTGTATTAA+TGG + chr3_4:49826587-49826606 Msa0504780:intron 20.0%
!!! TGTTAAGGTATCTTTTTTTT+TGG + chr3_4:49826838-49826857 Msa0504780:intron 20.0%
!!! ATGAAATCATATGTTTTTCT+GGG + chr3_4:49827072-49827091 Msa0504780:intron 20.0%
!! TTTAATACATATAAAAGAGG+GGG - chr3_4:49827222-49827241 None:intergenic 20.0%
!! GTTTAATACATATAAAAGAG+GGG - chr3_4:49827223-49827242 None:intergenic 20.0%
!! GGTTTAATACATATAAAAGA+GGG - chr3_4:49827224-49827243 None:intergenic 20.0%
!! AGGTTTAATACATATAAAAG+AGG - chr3_4:49827225-49827244 None:intergenic 20.0%
!! TACATCATAATACACAAAAT+TGG - chr3_4:49827710-49827729 None:intergenic 20.0%
! ATAGCAATAACATTATTTCC+AGG - chr3_4:49823646-49823665 None:intergenic 25.0%
! GGAAATAATGTTATTGCTAT+TGG + chr3_4:49823646-49823665 Msa0504780:five_prime_UTR 25.0%
!! AATAATGTTATTGCTATTGG+TGG + chr3_4:49823649-49823668 Msa0504780:five_prime_UTR 25.0%
!! CCTTTTACTGTTAAGAAAAT+GGG + chr3_4:49823958-49823977 Msa0504780:five_prime_UTR 25.0%
! AAAATAGTTGCTGAAAAATC+AGG + chr3_4:49825188-49825207 Msa0504780:five_prime_UTR 25.0%
! TCCTATTTATAAGAGAACTT+TGG + chr3_4:49825438-49825457 Msa0504780:intron 25.0%
! CCTATTTATAAGAGAACTTT+GGG + chr3_4:49825439-49825458 Msa0504780:intron 25.0%
! GTGTTAATTAAGCAAACTAA+AGG + chr3_4:49826055-49826074 Msa0504780:intron 25.0%
! AAATAGGACTTATCTAACAT+CGG - chr3_4:49826335-49826354 None:intergenic 25.0%
! TGTTAGATAAGTCCTATTTA+CGG + chr3_4:49826336-49826355 Msa0504780:intron 25.0%
! AAATAGGACTTATCTAACAT+CGG - chr3_4:49826335-49826354 None:intergenic 25.0%
! TGTTAGATAAGTCCTATTTA+CGG + chr3_4:49826336-49826355 Msa0504780:intron 25.0%
! TACACATCCAAAATAAATCA+TGG + chr3_4:49826981-49827000 Msa0504780:intron 25.0%
! AAAAAAACAAAATCTGGGAA+TGG - chr3_4:49827035-49827054 None:intergenic 25.0%
!! CATGAAATCATATGTTTTTC+TGG + chr3_4:49827071-49827090 Msa0504780:intron 25.0%
!! TGAAATCATATGTTTTTCTG+GGG + chr3_4:49827073-49827092 Msa0504780:intron 25.0%
! ATTAGACAATTTGTATTGTG+AGG - chr3_4:49827170-49827189 None:intergenic 25.0%
! TTAATACATATAAAAGAGGG+GGG - chr3_4:49827221-49827240 None:intergenic 25.0%
! AATTGTTTGAATGATGTACT+AGG + chr3_4:49827561-49827580 Msa0504780:three_prime_UTR 25.0%
!!! ATTATGTGCCGTTTTTTTAT+TGG + chr3_4:49827602-49827621 Msa0504780:three_prime_UTR 25.0%
! AACAAGAGCCAATAAAAAAA+CGG - chr3_4:49827613-49827632 None:intergenic 25.0%
TTCACTCATCTAATCTTCTT+TGG - chr3_4:49822817-49822836 None:intergenic 30.0%
!!! CGATTTTTGATTTTAGGGTT+TGG - chr3_4:49822990-49823009 None:intergenic 30.0%
AGGGAAAAAAACCCTAATAA+TGG + chr3_4:49823018-49823037 Msa0504780:five_prime_UTR 30.0%
CAACATTAACATCGTTGTAA+AGG - chr3_4:49823153-49823172 None:intergenic 30.0%
CTTTACAACGATGTTAATGT+TGG + chr3_4:49823151-49823170 Msa0504780:five_prime_UTR 30.0%
!! AGGAAGTACTTTGTTATTTG+TGG + chr3_4:49823717-49823736 Msa0504780:five_prime_UTR 30.0%
!! GGAAGTACTTTGTTATTTGT+GGG + chr3_4:49823718-49823737 Msa0504780:five_prime_UTR 30.0%
! TTTTATGATGAGAAAGCTAG+TGG + chr3_4:49823817-49823836 Msa0504780:five_prime_UTR 30.0%
TTTATGATGAGAAAGCTAGT+GGG + chr3_4:49823818-49823837 Msa0504780:five_prime_UTR 30.0%
ATGAATGGTCATTCGTTTAA+TGG + chr3_4:49823907-49823926 Msa0504780:five_prime_UTR 30.0%
TGAATGGTCATTCGTTTAAT+GGG + chr3_4:49823908-49823927 Msa0504780:five_prime_UTR 30.0%
! GCCTTTTACTGTTAAGAAAA+TGG + chr3_4:49823957-49823976 Msa0504780:five_prime_UTR 30.0%
! CCCATTTTCTTAACAGTAAA+AGG - chr3_4:49823961-49823980 None:intergenic 30.0%
TCAGAATAATAGGAATCAAC+AGG + chr3_4:49823987-49824006 Msa0504780:five_prime_UTR 30.0%
!! ATAATTGGTAATGGTGGAAA+TGG + chr3_4:49824264-49824283 Msa0504780:five_prime_UTR 30.0%
AATATGAGGGAAAAAGATAG+AGG + chr3_4:49824720-49824739 Msa0504780:five_prime_UTR 30.0%
CAGTAAATCAAGATTATCAC+AGG + chr3_4:49825076-49825095 Msa0504780:five_prime_UTR 30.0%
TGAAAAATCAGGATTTGTCA+TGG + chr3_4:49825199-49825218 Msa0504780:exon 30.0%
TTGAAACTAACCATTTCCAT+AGG - chr3_4:49825329-49825348 None:intergenic 30.0%
AAATATAAGCATGCAGAGAA+TGG - chr3_4:49825356-49825375 None:intergenic 30.0%
ATTCTCTGCATGCTTATATT+TGG + chr3_4:49825355-49825374 Msa0504780:intron 30.0%
AGTTCTCTTATAAATAGGAC+CGG - chr3_4:49825437-49825456 None:intergenic 30.0%
CCCAAAGTTCTCTTATAAAT+AGG - chr3_4:49825442-49825461 None:intergenic 30.0%
CTCAAGTTTCTCTTATAAAG+AGG + chr3_4:49825521-49825540 Msa0504780:intron 30.0%
TATTTAAATCATACTCCCTC+CGG - chr3_4:49825548-49825567 None:intergenic 30.0%
CTTGTCAATATCTTCTTCTA+GGG + chr3_4:49825589-49825608 Msa0504780:intron 30.0%
TTGCAATTATAACTGCATTG+TGG + chr3_4:49825631-49825650 Msa0504780:intron 30.0%
AGATTACAGAAAAGCAAACA+AGG - chr3_4:49825669-49825688 None:intergenic 30.0%
! CAGCTTGTTCAAAAAAAAGT+AGG - chr3_4:49825986-49826005 None:intergenic 30.0%
ACTAAAGGGATCTATAATCT+TGG + chr3_4:49826070-49826089 Msa0504780:intron 30.0%
CTAAAGGGATCTATAATCTT+GGG + chr3_4:49826071-49826090 Msa0504780:intron 30.0%
TAAAGGGATCTATAATCTTG+GGG + chr3_4:49826072-49826091 Msa0504780:intron 30.0%
TAGTTTATACATGTCAATGC+TGG + chr3_4:49826124-49826143 Msa0504780:intron 30.0%
ATAATCCCACATTCATATTG+CGG + chr3_4:49826252-49826271 Msa0504780:intron 30.0%
AAATTCCGCAATATGAATGT+GGG - chr3_4:49826260-49826279 None:intergenic 30.0%
AAAATTCCGCAATATGAATG+TGG - chr3_4:49826261-49826280 None:intergenic 30.0%
! ACATTCATATTGCGGAATTT+TGG + chr3_4:49826260-49826279 Msa0504780:intron 30.0%
AAGTCCATGCTAAAATATGT+TGG + chr3_4:49826511-49826530 Msa0504780:intron 30.0%
!!! CTATCCAACATATTTTAGCA+TGG - chr3_4:49826518-49826537 None:intergenic 30.0%
TGCTAAAATATGTTGGATAG+AGG + chr3_4:49826518-49826537 Msa0504780:intron 30.0%
TAGATATAAACACAGAACAC+AGG - chr3_4:49826557-49826576 None:intergenic 30.0%
AAGTCCATGCTAAAATATGT+TGG + chr3_4:49826511-49826530 Msa0504780:intron 30.0%
!!! CTATCCAACATATTTTAGCA+TGG - chr3_4:49826518-49826537 None:intergenic 30.0%
TGCTAAAATATGTTGGATAG+AGG + chr3_4:49826518-49826537 Msa0504780:intron 30.0%
TAGATATAAACACAGAACAC+AGG - chr3_4:49826557-49826576 None:intergenic 30.0%
AAAAGATACCTTAACAGCTT+AGG - chr3_4:49826834-49826853 None:intergenic 30.0%
!!! GGTATCTTTTTTTTTGGTAG+TGG + chr3_4:49826844-49826863 Msa0504780:intron 30.0%
!! GACAAGGTATCTTTAAAACA+TGG + chr3_4:49826912-49826931 Msa0504780:intron 30.0%
TCCAAAATAAATCATGGTAC+TGG + chr3_4:49826987-49827006 Msa0504780:intron 30.0%
! TCCAGTACCATGATTTATTT+TGG - chr3_4:49826991-49827010 None:intergenic 30.0%
! CTTGTGGTGTTTATGTATTT+TGG + chr3_4:49827138-49827157 Msa0504780:intron 30.0%
CATTAAAAAGAAGCAATAGC+AGG - chr3_4:49827245-49827264 None:intergenic 30.0%
AATAATAGGTGCAGTTTAGA+TGG - chr3_4:49827268-49827287 None:intergenic 30.0%
TACAAGTCCATAGCAATAAT+AGG - chr3_4:49827282-49827301 None:intergenic 30.0%
CAACTCTCAATGTAAGAAAA+AGG - chr3_4:49827410-49827429 None:intergenic 30.0%
! CTTTTTCTTACATTGAGAGT+TGG + chr3_4:49827408-49827427 Msa0504780:CDS 30.0%
AACCAATGTTGTTGATGTAA+TGG + chr3_4:49827493-49827512 Msa0504780:three_prime_UTR 30.0%
ACCAATGTTGTTGATGTAAT+GGG + chr3_4:49827494-49827513 Msa0504780:three_prime_UTR 30.0%
CAAAACAAAAAATGGATGGT+GGG - chr3_4:49827652-49827671 None:intergenic 30.0%
ACAAAACAAAAAATGGATGG+TGG - chr3_4:49827653-49827672 None:intergenic 30.0%
GTTAGGGACAAAACAAAAAA+TGG - chr3_4:49827660-49827679 None:intergenic 30.0%
GGTATACTAACTAACTGTTA+GGG - chr3_4:49827676-49827695 None:intergenic 30.0%
CTAACAGTTAGTTAGTATAC+CGG + chr3_4:49827675-49827694 Msa0504780:three_prime_UTR 30.0%
ACCAGCTTCATCCATTATTA+GGG - chr3_4:49823032-49823051 None:intergenic 35.0%
! AACGATGTTAATGTTGGTGA+GGG + chr3_4:49823157-49823176 Msa0504780:five_prime_UTR 35.0%
ATTCAGGTGGTAGAATTGAT+GGG + chr3_4:49823209-49823228 Msa0504780:five_prime_UTR 35.0%
TGATGAGAAGAAGGTTCAAT+CGG + chr3_4:49823234-49823253 Msa0504780:five_prime_UTR 35.0%
TTTCTGGGTTTCAGAATCAA+GGG + chr3_4:49823335-49823354 Msa0504780:five_prime_UTR 35.0%
TTTCAGAATCAAGGGTTTAG+AGG + chr3_4:49823343-49823362 Msa0504780:five_prime_UTR 35.0%
TTGAATTAGGTCAAGCATCT+GGG + chr3_4:49823413-49823432 Msa0504780:five_prime_UTR 35.0%
TGGAGGGGTTAATCTTAATA+GGG + chr3_4:49823606-49823625 Msa0504780:five_prime_UTR 35.0%
GTTAATCTTAATAGGGTTGG+AGG + chr3_4:49823613-49823632 Msa0504780:five_prime_UTR 35.0%
! AATGTTATTGCTATTGGTGG+TGG + chr3_4:49823652-49823671 Msa0504780:five_prime_UTR 35.0%
! TATTTGTGGGTGATTTGCAT+TGG + chr3_4:49823731-49823750 Msa0504780:five_prime_UTR 35.0%
!!! TTGTCAGGTTGAGTTTTATG+AGG + chr3_4:49823855-49823874 Msa0504780:five_prime_UTR 35.0%
GTAATTATCAAGGTGGAGAT+GGG + chr3_4:49824103-49824122 Msa0504780:five_prime_UTR 35.0%
AACAATAGAGGTTATGGAAG+AGG + chr3_4:49824150-49824169 Msa0504780:five_prime_UTR 35.0%
AGGTTATGGAAGAGGTAATT+GGG + chr3_4:49824158-49824177 Msa0504780:five_prime_UTR 35.0%
TGTCAATCCGATGAGAAATA+GGG + chr3_4:49824218-49824237 Msa0504780:five_prime_UTR 35.0%
! ATAGGTGGTAGAGGTATAAT+TGG + chr3_4:49824249-49824268 Msa0504780:five_prime_UTR 35.0%
! GGTAGAGGTATAATTGGTAA+TGG + chr3_4:49824255-49824274 Msa0504780:five_prime_UTR 35.0%
!! AGAGGTATAATTGGTAATGG+TGG + chr3_4:49824258-49824277 Msa0504780:five_prime_UTR 35.0%
TCCTCAGCAAATTATGAATC+AGG + chr3_4:49824326-49824345 Msa0504780:five_prime_UTR 35.0%
CCTCAGCAAATTATGAATCA+GGG + chr3_4:49824327-49824346 Msa0504780:five_prime_UTR 35.0%
AAAAAGGCAGGATTAACATG+AGG - chr3_4:49824489-49824508 None:intergenic 35.0%
!!! CATGTTAATCCTGCCTTTTT+TGG + chr3_4:49824489-49824508 Msa0504780:five_prime_UTR 35.0%
AAAAAGATAGAGGATCCGAA+AGG + chr3_4:49824730-49824749 Msa0504780:five_prime_UTR 35.0%
AAAAGATAGAGGATCCGAAA+GGG + chr3_4:49824731-49824750 Msa0504780:five_prime_UTR 35.0%
ACAGATATGCTGATCATCAT+AGG + chr3_4:49824991-49825010 Msa0504780:five_prime_UTR 35.0%
ATCAAGATTATCACAGGATG+AGG + chr3_4:49825082-49825101 Msa0504780:five_prime_UTR 35.0%
! AGGTCAAAAGATGCTGATTA+TGG + chr3_4:49825116-49825135 Msa0504780:five_prime_UTR 35.0%
! AAGATGCTGATTATGGAAAG+AGG + chr3_4:49825123-49825142 Msa0504780:five_prime_UTR 35.0%
TAATACTTTCCCTTGAGGAA+GGG + chr3_4:49825164-49825183 Msa0504780:five_prime_UTR 35.0%
!! ACTATTTTTCCCTTCCTCAA+GGG - chr3_4:49825176-49825195 None:intergenic 35.0%
!! AACTATTTTTCCCTTCCTCA+AGG - chr3_4:49825177-49825196 None:intergenic 35.0%
AGGATTTGTCATGGTTGTTT+GGG + chr3_4:49825208-49825227 Msa0504780:exon 35.0%
! TTTTTGCTCTCCTATGGAAA+TGG + chr3_4:49825316-49825335 Msa0504780:CDS 35.0%
GAGTAATAAGTATAGCAGAC+AGG - chr3_4:49825411-49825430 None:intergenic 35.0%
GTTTCTCTTATAAAGAGGAC+CGG + chr3_4:49825526-49825545 Msa0504780:intron 35.0%
GCTTGTCAATATCTTCTTCT+AGG + chr3_4:49825588-49825607 Msa0504780:intron 35.0%
! TTTTAGCGGTTGAATAAGCA+AGG - chr3_4:49825702-49825721 None:intergenic 35.0%
! AGTTTTGCTTTCACTCTTTG+TGG + chr3_4:49825770-49825789 Msa0504780:intron 35.0%
ATTACACCAGTATCACATAC+TGG - chr3_4:49825815-49825834 None:intergenic 35.0%
! TTTCCTTTGCTATGATACCA+TGG + chr3_4:49825846-49825865 Msa0504780:intron 35.0%
TGTTCCTACTTTGTAGTTGA+GGG - chr3_4:49826013-49826032 None:intergenic 35.0%
ATGTTCCTACTTTGTAGTTG+AGG - chr3_4:49826014-49826033 None:intergenic 35.0%
TCTAGCTAAAACTGTTCCAA+GGG - chr3_4:49826615-49826634 None:intergenic 35.0%
! TTCTAGCTAAAACTGTTCCA+AGG - chr3_4:49826616-49826635 None:intergenic 35.0%
! ACAGCTTAGGTATTTTCCAA+GGG - chr3_4:49826821-49826840 None:intergenic 35.0%
! AACAGCTTAGGTATTTTCCA+AGG - chr3_4:49826822-49826841 None:intergenic 35.0%
GGAAAATACCTAAGCTGTTA+AGG + chr3_4:49826823-49826842 Msa0504780:intron 35.0%
!!! TCTTTTTTTTTGGTAGTGGC+CGG + chr3_4:49826848-49826867 Msa0504780:intron 35.0%
GAGAATGAAATGCTTGGTTA+GGG + chr3_4:49827009-49827028 Msa0504780:intron 35.0%
ACCTATGGACAACTATAACT+CGG - chr3_4:49827110-49827129 None:intergenic 35.0%
AACTGCACCTATTATTGCTA+TGG + chr3_4:49827272-49827291 Msa0504780:intron 35.0%
ATACTGTTCATCTAAACCAC+TGG + chr3_4:49827332-49827351 Msa0504780:CDS 35.0%
TACTGTTCATCTAAACCACT+GGG + chr3_4:49827333-49827352 Msa0504780:CDS 35.0%
! ACTTGGCTCTTCAATATTGA+TGG - chr3_4:49827378-49827397 None:intergenic 35.0%
GAAAAAGGATTGTCATGACT+TGG - chr3_4:49827395-49827414 None:intergenic 35.0%
!!! GATGTACTAGGTTTTAGTTG+AGG + chr3_4:49827573-49827592 Msa0504780:three_prime_UTR 35.0%
GGGACAAAACAAAAAATGGA+TGG - chr3_4:49827656-49827675 None:intergenic 35.0%
CGGTATACTAACTAACTGTT+AGG - chr3_4:49827677-49827696 None:intergenic 35.0%
CCAGCTTTACAGTAATTGAA+TGG - chr3_4:49827742-49827761 None:intergenic 35.0%
CCATTCAATTACTGTAAAGC+TGG + chr3_4:49827739-49827758 Msa0504780:three_prime_UTR 35.0%
TGAACAACTTCTCACACGTT+AGG + chr3_4:49822833-49822852 Msa0504780:five_prime_UTR 40.0%
GAACAACTTCTCACACGTTA+GGG + chr3_4:49822834-49822853 Msa0504780:five_prime_UTR 40.0%
!! ACCCTAATAATGGATGAAGC+TGG + chr3_4:49823028-49823047 Msa0504780:five_prime_UTR 40.0%
CACCAGCTTCATCCATTATT+AGG - chr3_4:49823033-49823052 None:intergenic 40.0%
CAGCAGATATAGCTTCGTTA+CGG - chr3_4:49823084-49823103 None:intergenic 40.0%
ATATCTGCTGTAGCTGATGA+TGG + chr3_4:49823094-49823113 Msa0504780:five_prime_UTR 40.0%
CAACGATGTTAATGTTGGTG+AGG + chr3_4:49823156-49823175 Msa0504780:five_prime_UTR 40.0%
! AGGGTTTTCTTCAATCGTTG+AGG + chr3_4:49823176-49823195 Msa0504780:five_prime_UTR 40.0%
TTGAGGAAGAACGATGATTC+AGG + chr3_4:49823193-49823212 Msa0504780:five_prime_UTR 40.0%
GATTCAGGTGGTAGAATTGA+TGG + chr3_4:49823208-49823227 Msa0504780:five_prime_UTR 40.0%
TTCAGGTGGTAGAATTGATG+GGG + chr3_4:49823210-49823229 Msa0504780:five_prime_UTR 40.0%
GATGAGAAGAAGGTTCAATC+GGG + chr3_4:49823235-49823254 Msa0504780:five_prime_UTR 40.0%
! GTGATGAATCTAGGGTTTCT+GGG + chr3_4:49823320-49823339 Msa0504780:five_prime_UTR 40.0%
! GTTTCTGGGTTTCAGAATCA+AGG + chr3_4:49823334-49823353 Msa0504780:five_prime_UTR 40.0%
AGAATCAAGGGTTTAGAGGA+GGG + chr3_4:49823347-49823366 Msa0504780:five_prime_UTR 40.0%
GGTGGAATTAGGGTTGAATT+AGG + chr3_4:49823400-49823419 Msa0504780:five_prime_UTR 40.0%
GTTGAATTAGGTCAAGCATC+TGG + chr3_4:49823412-49823431 Msa0504780:five_prime_UTR 40.0%
TGGGAAATCGAGTGAAATTG+AGG + chr3_4:49823432-49823451 Msa0504780:five_prime_UTR 40.0%
AGTGAAATTGAGGAACAGAG+AGG + chr3_4:49823442-49823461 Msa0504780:five_prime_UTR 40.0%
! AATGATGGTGTTGGAGTTCA+GGG + chr3_4:49823469-49823488 Msa0504780:five_prime_UTR 40.0%
GTGGAGGGGTTAATCTTAAT+AGG + chr3_4:49823605-49823624 Msa0504780:five_prime_UTR 40.0%
GGGGTTAATCTTAATAGGGT+TGG + chr3_4:49823610-49823629 Msa0504780:five_prime_UTR 40.0%
CTTAATAGGGTTGGAGGAAA+TGG + chr3_4:49823619-49823638 Msa0504780:five_prime_UTR 40.0%
GAAGCTGAGTTATGCAAGTA+TGG + chr3_4:49823775-49823794 Msa0504780:five_prime_UTR 40.0%
ATGCAAGTATGGACAAGTGA+AGG + chr3_4:49823786-49823805 Msa0504780:five_prime_UTR 40.0%
AAAGCTAGTGGGAAATCCAA+AGG + chr3_4:49823829-49823848 Msa0504780:five_prime_UTR 40.0%
AAGCTAGTGGGAAATCCAAA+GGG + chr3_4:49823830-49823849 Msa0504780:five_prime_UTR 40.0%
!! GAAATCCAAAGGGTATTGTC+AGG + chr3_4:49823840-49823859 Msa0504780:five_prime_UTR 40.0%
ATGGTCATTCGTTTAATGGG+AGG + chr3_4:49823911-49823930 Msa0504780:five_prime_UTR 40.0%
GTTGCAATATTACTACCACC+AGG - chr3_4:49824078-49824097 None:intergenic 40.0%
GGTGGTAGTAATATTGCAAC+TGG + chr3_4:49824078-49824097 Msa0504780:five_prime_UTR 40.0%
GGTAGTAATATTGCAACTGG+CGG + chr3_4:49824081-49824100 Msa0504780:five_prime_UTR 40.0%
GGTAATTATCAAGGTGGAGA+TGG + chr3_4:49824102-49824121 Msa0504780:five_prime_UTR 40.0%
GAGGTTATGGAAGAGGTAAT+TGG + chr3_4:49824157-49824176 Msa0504780:five_prime_UTR 40.0%
GGTTATGGAAGAGGTAATTG+GGG + chr3_4:49824159-49824178 Msa0504780:five_prime_UTR 40.0%
! CTATTTCTCATCGGATTGAC+AGG - chr3_4:49824219-49824238 None:intergenic 40.0%
CTGTCAATCCGATGAGAAAT+AGG + chr3_4:49824217-49824236 Msa0504780:five_prime_UTR 40.0%
GTCAATCCGATGAGAAATAG+GGG + chr3_4:49824219-49824238 Msa0504780:five_prime_UTR 40.0%
! GGTAATGGTGGAAATGGATT+TGG + chr3_4:49824270-49824289 Msa0504780:five_prime_UTR 40.0%
! AATGGATTTGGACAGGGTAT+TGG + chr3_4:49824282-49824301 Msa0504780:five_prime_UTR 40.0%
! ATTTGCTGAGGATGCATCAT+CGG - chr3_4:49824318-49824337 None:intergenic 40.0%
!! CCCTGATTCATAATTTGCTG+AGG - chr3_4:49824330-49824349 None:intergenic 40.0%
!!! AATCCTGCCTTTTTTGGAAG+AGG + chr3_4:49824495-49824514 Msa0504780:five_prime_UTR 40.0%
!!! ATCCTGCCTTTTTTGGAAGA+GGG + chr3_4:49824496-49824515 Msa0504780:five_prime_UTR 40.0%
GGTATGGATGGTCCTAATAT+GGG + chr3_4:49824555-49824574 Msa0504780:five_prime_UTR 40.0%
ATGGTCCTAATATGGGAATG+TGG + chr3_4:49824562-49824581 Msa0504780:five_prime_UTR 40.0%
TGGGTGGCAGAATAATATGA+GGG + chr3_4:49824707-49824726 Msa0504780:five_prime_UTR 40.0%
TACAGGGATGATAGAGATCA+AGG + chr3_4:49824780-49824799 Msa0504780:five_prime_UTR 40.0%
ACAGGGATGATAGAGATCAA+GGG + chr3_4:49824781-49824800 Msa0504780:five_prime_UTR 40.0%
! CAGCATCTTTTGACCTAGAA+TGG - chr3_4:49825112-49825131 None:intergenic 40.0%
! ATGCTGATTATGGAAAGAGG+AGG + chr3_4:49825126-49825145 Msa0504780:five_prime_UTR 40.0%
!! CAAGGGAAAGTATTACTCAG+AGG - chr3_4:49825159-49825178 None:intergenic 40.0%
CTGAGTAATACTTTCCCTTG+AGG + chr3_4:49825159-49825178 Msa0504780:five_prime_UTR 40.0%
GTAATACTTTCCCTTGAGGA+AGG + chr3_4:49825163-49825182 Msa0504780:five_prime_UTR 40.0%
CAGGATTTGTCATGGTTGTT+TGG + chr3_4:49825207-49825226 Msa0504780:exon 40.0%
!! TCATGGTTGTTTGGGTTTTC+TGG + chr3_4:49825216-49825235 Msa0504780:exon 40.0%
GCTATACTTATTACTCCCTC+CGG + chr3_4:49825415-49825434 Msa0504780:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr3_4:49825433-49825452 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr3_4:49825434-49825453 None:intergenic 40.0%
GTGATTCCAGTATGTGATAC+TGG + chr3_4:49825806-49825825 Msa0504780:intron 40.0%
CAACCATGGTATCATAGCAA+AGG - chr3_4:49825852-49825871 None:intergenic 40.0%
AGCATGTCTTTGTTAAGACC+AGG + chr3_4:49825915-49825934 Msa0504780:intron 40.0%
! TCAATAGTCTTGCAATCACC+TGG - chr3_4:49825936-49825955 None:intergenic 40.0%
ATTGCCCTCAACTACAAAGT+AGG + chr3_4:49826006-49826025 Msa0504780:intron 40.0%
GAATGTGGTTAAAAGGCGAA+TGG - chr3_4:49826286-49826305 None:intergenic 40.0%
ACCAGCAGAATGTGGTTAAA+AGG - chr3_4:49826293-49826312 None:intergenic 40.0%
AAACTGTTACCAGCAGAATG+TGG - chr3_4:49826301-49826320 None:intergenic 40.0%
!!! CTTTTTTTTTGGTAGTGGCC+GGG + chr3_4:49826849-49826868 Msa0504780:intron 40.0%
!!! TTTTTTTTTGGTAGTGGCCG+GGG + chr3_4:49826850-49826869 Msa0504780:intron 40.0%
GTACTGGAGAATGAAATGCT+TGG + chr3_4:49827003-49827022 Msa0504780:intron 40.0%
GGAGAATGAAATGCTTGGTT+AGG + chr3_4:49827008-49827027 Msa0504780:intron 40.0%
ACCGAGTTATAGTTGTCCAT+AGG + chr3_4:49827106-49827125 Msa0504780:intron 40.0%
GCCCATTACATCAACAACAT+TGG - chr3_4:49827498-49827517 None:intergenic 40.0%
ACAAAATTGGCATGCTCAAC+CGG - chr3_4:49827697-49827716 None:intergenic 40.0%
GAGAAGAAGAGTCAGAGAGA+AGG - chr3_4:49822864-49822883 None:intergenic 45.0%
TCAAAACGGCGTCGTTGAAA+GGG - chr3_4:49822946-49822965 None:intergenic 45.0%
ATCAAAACGGCGTCGTTGAA+AGG - chr3_4:49822947-49822966 None:intergenic 45.0%
ATGGATGAAGCTGGTGAAAG+TGG + chr3_4:49823037-49823056 Msa0504780:five_prime_UTR 45.0%
TGGTGAAAGTGGAGATCCTA+TGG + chr3_4:49823048-49823067 Msa0504780:five_prime_UTR 45.0%
TTACGGTGGAACTGATCCAT+AGG - chr3_4:49823067-49823086 None:intergenic 45.0%
CAGATATAGCTTCGTTACGG+TGG - chr3_4:49823081-49823100 None:intergenic 45.0%
AGGAAGAACGATGATTCAGG+TGG + chr3_4:49823196-49823215 Msa0504780:five_prime_UTR 45.0%
!! TGATGGGGTTGATGAGAAGA+AGG + chr3_4:49823225-49823244 Msa0504780:five_prime_UTR 45.0%
AAGAAGGTTCAATCGGGTTC+TGG + chr3_4:49823241-49823260 Msa0504780:five_prime_UTR 45.0%
!! TTGGTGGTGGTGATGAATCT+AGG + chr3_4:49823311-49823330 Msa0504780:five_prime_UTR 45.0%
!! TGGTGGTGGTGATGAATCTA+GGG + chr3_4:49823312-49823331 Msa0504780:five_prime_UTR 45.0%
! GGTGATGAATCTAGGGTTTC+TGG + chr3_4:49823319-49823338 Msa0504780:five_prime_UTR 45.0%
CAGAATCAAGGGTTTAGAGG+AGG + chr3_4:49823346-49823365 Msa0504780:five_prime_UTR 45.0%
!! AGGGAATTCTGGAGTTGGAT+CGG + chr3_4:49823366-49823385 Msa0504780:five_prime_UTR 45.0%
! GAACAGAGAGGTGTGAATGA+TGG + chr3_4:49823454-49823473 Msa0504780:five_prime_UTR 45.0%
! AGAGGTGTGAATGATGGTGT+TGG + chr3_4:49823460-49823479 Msa0504780:five_prime_UTR 45.0%
! GAATGATGGTGTTGGAGTTC+AGG + chr3_4:49823468-49823487 Msa0504780:five_prime_UTR 45.0%
! ATGATGGTGTTGGAGTTCAG+GGG + chr3_4:49823470-49823489 Msa0504780:five_prime_UTR 45.0%
!! CAACAACATGGTGGTGTTGT+TGG + chr3_4:49823538-49823557 Msa0504780:five_prime_UTR 45.0%
!! GTGGTGTTGTTGGAAACGAT+GGG + chr3_4:49823548-49823567 Msa0504780:five_prime_UTR 45.0%
TGTTGTTGGAAACGATGGGT+TGG + chr3_4:49823552-49823571 Msa0504780:five_prime_UTR 45.0%
TTGGTGAGACAAGTTCCAAG+TGG + chr3_4:49823571-49823590 Msa0504780:five_prime_UTR 45.0%
!! CAAGTTCCAAGTGGTGTTGT+TGG + chr3_4:49823580-49823599 Msa0504780:five_prime_UTR 45.0%
!! GTTATTGCTATTGGTGGTGG+AGG + chr3_4:49823655-49823674 Msa0504780:five_prime_UTR 45.0%
! TTGTGGGTGATTTGCATTGG+TGG + chr3_4:49823734-49823753 Msa0504780:five_prime_UTR 45.0%
CAAGTATGGACAAGTGAAGG+AGG + chr3_4:49823789-49823808 Msa0504780:five_prime_UTR 45.0%
CTCAACCTGACAATACCCTT+TGG - chr3_4:49823848-49823867 None:intergenic 45.0%
ATATGCTGCAACTGCCTGTA+AGG + chr3_4:49823879-49823898 Msa0504780:five_prime_UTR 45.0%
ACCATTCATCCCTTCCTTAC+AGG - chr3_4:49823896-49823915 None:intergenic 45.0%
GACGCAAAAGCAACAACACA+CGG - chr3_4:49823937-49823956 None:intergenic 45.0%
TGGGCGAAGCTCAGAATAAT+AGG + chr3_4:49823977-49823996 Msa0504780:five_prime_UTR 45.0%
GCAACTGGCGGTAATTATCA+AGG + chr3_4:49824093-49824112 Msa0504780:five_prime_UTR 45.0%
ACTGGCGGTAATTATCAAGG+TGG + chr3_4:49824096-49824115 Msa0504780:five_prime_UTR 45.0%
GAAGAGGTAATTGGGGTAGA+GGG + chr3_4:49824166-49824185 Msa0504780:five_prime_UTR 45.0%
TAGAGGGAACAATCCTGGTA+TGG + chr3_4:49824182-49824201 Msa0504780:five_prime_UTR 45.0%
AGAGGGAACAATCCTGGTAT+GGG + chr3_4:49824183-49824202 Msa0504780:five_prime_UTR 45.0%
AATCCGATGAGAAATAGGGG+TGG + chr3_4:49824222-49824241 Msa0504780:five_prime_UTR 45.0%
! TGGTGGAAATGGATTTGGAC+AGG + chr3_4:49824275-49824294 Msa0504780:five_prime_UTR 45.0%
! GGTGGAAATGGATTTGGACA+GGG + chr3_4:49824276-49824295 Msa0504780:five_prime_UTR 45.0%
!! CAGGGTTTTGATCCTGCATT+TGG + chr3_4:49824345-49824364 Msa0504780:five_prime_UTR 45.0%
!! GGTTTTGATCCTGCATTTGG+TGG + chr3_4:49824348-49824367 Msa0504780:five_prime_UTR 45.0%
ATGCCTCAATTTCCTGGTGT+TGG + chr3_4:49824438-49824457 Msa0504780:five_prime_UTR 45.0%
!! TTAACATGAGGTGCTACTCC+AGG - chr3_4:49824477-49824496 None:intergenic 45.0%
ATCCCTCTTCCAAAAAAGGC+AGG - chr3_4:49824501-49824520 None:intergenic 45.0%
AGGCATCCCTCTTCCAAAAA+AGG - chr3_4:49824505-49824524 None:intergenic 45.0%
ATCATCCCCATTCCATTCAC+AGG - chr3_4:49824525-49824544 None:intergenic 45.0%
GGGTATGGATGGTCCTAATA+TGG + chr3_4:49824554-49824573 Msa0504780:five_prime_UTR 45.0%
TCCTAATATGGGAATGTGGC+CGG + chr3_4:49824566-49824585 Msa0504780:five_prime_UTR 45.0%
AATGTGGCCGGATCCAAATA+TGG + chr3_4:49824578-49824597 Msa0504780:five_prime_UTR 45.0%
ATGTGGCCGGATCCAAATAT+GGG + chr3_4:49824579-49824598 Msa0504780:five_prime_UTR 45.0%
ATCAGACCATCAGTATGGTG+AGG + chr3_4:49824668-49824687 Msa0504780:five_prime_UTR 45.0%
GATTCACCTCACCATACTGA+TGG - chr3_4:49824677-49824696 None:intergenic 45.0%
AGGTGAATCCTGATAGAGCT+GGG + chr3_4:49824688-49824707 Msa0504780:five_prime_UTR 45.0%
CTGGGTGGCAGAATAATATG+AGG + chr3_4:49824706-49824725 Msa0504780:five_prime_UTR 45.0%
! TTCTTCTGAGCGAAGGTACA+GGG + chr3_4:49824764-49824783 Msa0504780:five_prime_UTR 45.0%
GCACCTAGAGAAAAAGATGC+CGG + chr3_4:49824816-49824835 Msa0504780:five_prime_UTR 45.0%
! TGTCCGGCATCTTTTTCTCT+AGG - chr3_4:49824822-49824841 None:intergenic 45.0%
! TGCTTTCTTTCTGGCCATTC+AGG - chr3_4:49824849-49824868 None:intergenic 45.0%
TCATCACGGTGCTTTCTTTC+TGG - chr3_4:49824858-49824877 None:intergenic 45.0%
!! AAAGCACCGTGATGATAGAG+AGG + chr3_4:49824863-49824882 Msa0504780:five_prime_UTR 45.0%
GAACCACCTCTCTATCATCA+CGG - chr3_4:49824872-49824891 None:intergenic 45.0%
GGACAGATACAGGGAAGATA+GGG + chr3_4:49824968-49824987 Msa0504780:five_prime_UTR 45.0%
AGGATGAGGAACACCATTCT+AGG + chr3_4:49825096-49825115 Msa0504780:five_prime_UTR 45.0%
CTGATTATGGAAAGAGGAGG+CGG + chr3_4:49825129-49825148 Msa0504780:five_prime_UTR 45.0%
!! TGGTTGTTTGGGTTTTCTGG+TGG + chr3_4:49825219-49825238 Msa0504780:CDS 45.0%
CTGCTCAACAACTTCTAGGT+CGG - chr3_4:49825252-49825271 None:intergenic 45.0%
TGTTCCAGTTGCATCTTGTC+AGG + chr3_4:49825289-49825308 Msa0504780:CDS 45.0%
!! GGAGTGTTTTTGCTCTCCTA+TGG + chr3_4:49825310-49825329 Msa0504780:CDS 45.0%
TCTCTTATAAAGAGGACCGG+AGG + chr3_4:49825529-49825548 Msa0504780:intron 45.0%
CTCTTATAAAGAGGACCGGA+GGG + chr3_4:49825530-49825549 Msa0504780:intron 45.0%
TAGCGGTTGAATAAGCAAGG+AGG - chr3_4:49825699-49825718 None:intergenic 45.0%
ACATGCACTCAAGTCAACCA+TGG - chr3_4:49825866-49825885 None:intergenic 45.0%
GGCACATTGTTGCTAAACAG+TGG + chr3_4:49826145-49826164 Msa0504780:intron 45.0%
GCTTCACAAATTGCCTATGG+CGG - chr3_4:49826204-49826223 None:intergenic 45.0%
GGTGCTTCACAAATTGCCTA+TGG - chr3_4:49826207-49826226 None:intergenic 45.0%
! TTGTGAAGCACCACTAGTCA+TGG + chr3_4:49826215-49826234 Msa0504780:intron 45.0%
GAATGTGGGATTATGACCTG+TGG - chr3_4:49826246-49826265 None:intergenic 45.0%
! GCCTTTTAACCACATTCTGC+TGG + chr3_4:49826289-49826308 Msa0504780:intron 45.0%
CCAAGGGAGCCATTAATACA+AGG - chr3_4:49826599-49826618 None:intergenic 45.0%
CCTTGTATTAATGGCTCCCT+TGG + chr3_4:49826596-49826615 Msa0504780:intron 45.0%
CCAAGGGAGCCATTAATACA+AGG - chr3_4:49826599-49826618 None:intergenic 45.0%
CCTTGTATTAATGGCTCCCT+TGG + chr3_4:49826596-49826615 Msa0504780:intron 45.0%
CCACAAGCAAACTACACCTA+TGG - chr3_4:49827125-49827144 None:intergenic 45.0%
!! CCATAGGTGTAGTTTGCTTG+TGG + chr3_4:49827122-49827141 Msa0504780:intron 45.0%
! TAAACCACTGGGTTGCTTTG+AGG + chr3_4:49827344-49827363 Msa0504780:CDS 45.0%
! TCAATCGGGTTCTGGTGTTC+AGG + chr3_4:49823249-49823268 Msa0504780:five_prime_UTR 50.0%
GGGTTTAGAGGAGGGAATTC+TGG + chr3_4:49823355-49823374 Msa0504780:five_prime_UTR 50.0%
!! AGAGGAGGGAATTCTGGAGT+TGG + chr3_4:49823361-49823380 Msa0504780:five_prime_UTR 50.0%
!! GGGAATTCTGGAGTTGGATC+GGG + chr3_4:49823367-49823386 Msa0504780:five_prime_UTR 50.0%
!! TACCGGTGGTGGTGGAATTA+GGG + chr3_4:49823390-49823409 Msa0504780:five_prime_UTR 50.0%
AACCCTAATTCCACCACCAC+CGG - chr3_4:49823395-49823414 None:intergenic 50.0%
CAGCAGCAACAGCAACAACA+TGG + chr3_4:49823526-49823545 Msa0504780:five_prime_UTR 50.0%
CAGCAACAGCAACAACATGG+TGG + chr3_4:49823529-49823548 Msa0504780:five_prime_UTR 50.0%
!! GGTGGTGTTGTTGGAAACGA+TGG + chr3_4:49823547-49823566 Msa0504780:five_prime_UTR 50.0%
!! GTTCCAAGTGGTGTTGTTGG+TGG + chr3_4:49823583-49823602 Msa0504780:five_prime_UTR 50.0%
!! ATTGCTATTGGTGGTGGAGG+AGG + chr3_4:49823658-49823677 Msa0504780:five_prime_UTR 50.0%
ATGGACAAGTGAAGGAGGTG+AGG + chr3_4:49823794-49823813 Msa0504780:five_prime_UTR 50.0%
CTGCAACTGCCTGTAAGGAA+GGG + chr3_4:49823884-49823903 Msa0504780:five_prime_UTR 50.0%
GCCTGTAAGGAAGGGATGAA+TGG + chr3_4:49823892-49823911 Msa0504780:five_prime_UTR 50.0%
CAACAGGTGAACCAAACTGC+CGG + chr3_4:49824003-49824022 Msa0504780:five_prime_UTR 50.0%
GGAAGAGGTAATTGGGGTAG+AGG + chr3_4:49824165-49824184 Msa0504780:five_prime_UTR 50.0%
AATCCTGGTATGGGTGGTAG+AGG + chr3_4:49824192-49824211 Msa0504780:five_prime_UTR 50.0%
! CCACCACCCCTATTTCTCAT+CGG - chr3_4:49824228-49824247 None:intergenic 50.0%
CGATGAGAAATAGGGGTGGT+GGG + chr3_4:49824226-49824245 Msa0504780:five_prime_UTR 50.0%
!! AGAAATAGGGGTGGTGGGAT+AGG + chr3_4:49824231-49824250 Msa0504780:five_prime_UTR 50.0%
AAGCCTGCCATTCTACCCAT+GGG - chr3_4:49824375-49824394 None:intergenic 50.0%
AAAGCCTGCCATTCTACCCA+TGG - chr3_4:49824376-49824395 None:intergenic 50.0%
ATGGGTAGAATGGCAGGCTT+TGG + chr3_4:49824375-49824394 Msa0504780:five_prime_UTR 50.0%
GGGATGATGCCTCAATTTCC+TGG + chr3_4:49824432-49824451 Msa0504780:five_prime_UTR 50.0%
CCTCCAACACCAGGAAATTG+AGG - chr3_4:49824444-49824463 None:intergenic 50.0%
! CCTCAATTTCCTGGTGTTGG+AGG + chr3_4:49824441-49824460 Msa0504780:five_prime_UTR 50.0%
! TTTCCTGGTGTTGGAGGTGT+TGG + chr3_4:49824447-49824466 Msa0504780:five_prime_UTR 50.0%
AAACCAACACCTCCAACACC+AGG - chr3_4:49824453-49824472 None:intergenic 50.0%
AGGGATGCCTGTGAATGGAA+TGG + chr3_4:49824515-49824534 Msa0504780:five_prime_UTR 50.0%
GGGATGCCTGTGAATGGAAT+GGG + chr3_4:49824516-49824535 Msa0504780:five_prime_UTR 50.0%
GGATGCCTGTGAATGGAATG+GGG + chr3_4:49824517-49824536 Msa0504780:five_prime_UTR 50.0%
AATGGGGATGATGCCCCAAT+CGG + chr3_4:49824533-49824552 Msa0504780:five_prime_UTR 50.0%
AGGACCATCCATACCCGATT+GGG - chr3_4:49824550-49824569 None:intergenic 50.0%
TAGGACCATCCATACCCGAT+TGG - chr3_4:49824551-49824570 None:intergenic 50.0%
TCCGGCCACATTCCCATATT+AGG - chr3_4:49824570-49824589 None:intergenic 50.0%
CATCCGCCCATATTTGGATC+CGG - chr3_4:49824588-49824607 None:intergenic 50.0%
GGATCCAAATATGGGCGGAT+GGG + chr3_4:49824587-49824606 Msa0504780:five_prime_UTR 50.0%
GATCCAAATATGGGCGGATG+GGG + chr3_4:49824588-49824607 Msa0504780:five_prime_UTR 50.0%
AGGGCTGGAGAGTCAAGTTA+TGG + chr3_4:49824633-49824652 Msa0504780:five_prime_UTR 50.0%
GGGCTGGAGAGTCAAGTTAT+GGG + chr3_4:49824634-49824653 Msa0504780:five_prime_UTR 50.0%
GGCTGGAGAGTCAAGTTATG+GGG + chr3_4:49824635-49824654 Msa0504780:five_prime_UTR 50.0%
TGGAGAGTCAAGTTATGGGG+AGG + chr3_4:49824638-49824657 Msa0504780:five_prime_UTR 50.0%
GCAGCATCAGACCATCAGTA+TGG + chr3_4:49824663-49824682 Msa0504780:five_prime_UTR 50.0%
GAGGTGAATCCTGATAGAGC+TGG + chr3_4:49824687-49824706 Msa0504780:five_prime_UTR 50.0%
TGAATCCTGATAGAGCTGGG+TGG + chr3_4:49824691-49824710 Msa0504780:five_prime_UTR 50.0%
ATAGAGGATCCGAAAGGGAC+TGG + chr3_4:49824736-49824755 Msa0504780:five_prime_UTR 50.0%
GTACCTTCGCTCAGAAGAAC+CGG - chr3_4:49824763-49824782 None:intergenic 50.0%
! GTTCTTCTGAGCGAAGGTAC+AGG + chr3_4:49824763-49824782 Msa0504780:five_prime_UTR 50.0%
ATGCCGGACATGATCCTGAA+TGG + chr3_4:49824832-49824851 Msa0504780:five_prime_UTR 50.0%
TGGCCATTCAGGATCATGTC+CGG - chr3_4:49824838-49824857 None:intergenic 50.0%
GGGACAGATACAGGGAAGAT+AGG + chr3_4:49824967-49824986 Msa0504780:five_prime_UTR 50.0%
! CCTCATCATGCTCTGGTTCA+CGG - chr3_4:49825025-49825044 None:intergenic 50.0%
AACCAGAGCATGATGAGGAG+TGG + chr3_4:49825027-49825046 Msa0504780:five_prime_UTR 50.0%
ACCAGAGCATGATGAGGAGT+GGG + chr3_4:49825028-49825047 Msa0504780:five_prime_UTR 50.0%
CTCAACAACTTCTAGGTCGG+AGG - chr3_4:49825249-49825268 None:intergenic 50.0%
GCAGCTGCTCAACAACTTCT+AGG - chr3_4:49825256-49825275 None:intergenic 50.0%
CACTCCTGACAAGATGCAAC+TGG - chr3_4:49825296-49825315 None:intergenic 50.0%
GTTGCTAAACAGTGGCGTAG+TGG + chr3_4:49826153-49826172 Msa0504780:intron 50.0%
! AGTGGCGTAGTGGAATCATG+TGG + chr3_4:49826163-49826182 Msa0504780:intron 50.0%
! GCGTAGTGGAATCATGTGGT+GGG + chr3_4:49826167-49826186 Msa0504780:intron 50.0%
GGTTTAGTGCTATCCGCCAT+AGG + chr3_4:49826188-49826207 Msa0504780:intron 50.0%
AAGCACCACTAGTCATGGCA+GGG + chr3_4:49826220-49826239 Msa0504780:intron 50.0%
!! TTAGCTCAGTTGGTAGGTCC+GGG - chr3_4:49826883-49826902 None:intergenic 50.0%
!! CTTAGCTCAGTTGGTAGGTC+CGG - chr3_4:49826884-49826903 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG - chr3_4:49826889-49826908 None:intergenic 50.0%
CCTTGTGAGCTTAGCTCAGT+TGG - chr3_4:49826893-49826912 None:intergenic 50.0%
CCAACTGAGCTAAGCTCACA+AGG + chr3_4:49826890-49826909 Msa0504780:intron 50.0%
GAGCTAAGCTCACAAGGACA+AGG + chr3_4:49826896-49826915 Msa0504780:intron 50.0%
TGATCCTCAAAGCAACCCAG+TGG - chr3_4:49827351-49827370 None:intergenic 50.0%
! GGGTTCTGGTGTTCAGGATC+CGG + chr3_4:49823255-49823274 Msa0504780:five_prime_UTR 55.0%
TTCTGGTGTTCAGGATCCGG+TGG + chr3_4:49823258-49823277 Msa0504780:five_prime_UTR 55.0%
TCACCAACAACACCAGCCAC+CGG - chr3_4:49823277-49823296 None:intergenic 55.0%
!! GTGGCTGGTGTTGTTGGTGA+GGG + chr3_4:49823277-49823296 Msa0504780:five_prime_UTR 55.0%
! GGTGAGGGAGTGAAGAGTGT+TGG + chr3_4:49823292-49823311 Msa0504780:five_prime_UTR 55.0%
!! GAGGGAGTGAAGAGTGTTGG+TGG + chr3_4:49823295-49823314 Msa0504780:five_prime_UTR 55.0%
!! GGAGTGAAGAGTGTTGGTGG+TGG + chr3_4:49823298-49823317 Msa0504780:five_prime_UTR 55.0%
! TCTGGAGTTGGATCGGGTAC+CGG + chr3_4:49823373-49823392 Msa0504780:five_prime_UTR 55.0%
!! GTACCGGTGGTGGTGGAATT+AGG + chr3_4:49823389-49823408 Msa0504780:five_prime_UTR 55.0%
CCACCACCAACAACACCACT+TGG - chr3_4:49823589-49823608 None:intergenic 55.0%
!! CCAAGTGGTGTTGTTGGTGG+TGG + chr3_4:49823586-49823605 Msa0504780:five_prime_UTR 55.0%
!! AGTGGTGTTGTTGGTGGTGG+AGG + chr3_4:49823589-49823608 Msa0504780:five_prime_UTR 55.0%
!! GTGGTGTTGTTGGTGGTGGA+GGG + chr3_4:49823590-49823609 Msa0504780:five_prime_UTR 55.0%
!! TGGTGTTGTTGGTGGTGGAG+GGG + chr3_4:49823591-49823610 Msa0504780:five_prime_UTR 55.0%
AGGGTTGGAGGAAATGGACC+TGG + chr3_4:49823625-49823644 Msa0504780:five_prime_UTR 55.0%
!! ATTGGTGGTGGAGGAGGTGA+AGG + chr3_4:49823664-49823683 Msa0504780:five_prime_UTR 55.0%
!! TTGGTGGTGGAGGAGGTGAA+GGG + chr3_4:49823665-49823684 Msa0504780:five_prime_UTR 55.0%
! GTGGACTACTGATGCTGAGC+TGG + chr3_4:49823753-49823772 Msa0504780:five_prime_UTR 55.0%
GCTGCAACTGCCTGTAAGGA+AGG + chr3_4:49823883-49823902 Msa0504780:five_prime_UTR 55.0%
TGAACCAAACTGCCGGTGGT+GGG + chr3_4:49824010-49824029 Msa0504780:five_prime_UTR 55.0%
TGGGGTTAACCCGGGAAGAA+GGG + chr3_4:49824029-49824048 Msa0504780:five_prime_UTR 55.0%
TGGGGTAGAGGGAACAATCC+TGG + chr3_4:49824177-49824196 Msa0504780:five_prime_UTR 55.0%
GGGAACAATCCTGGTATGGG+TGG + chr3_4:49824186-49824205 Msa0504780:five_prime_UTR 55.0%
CCGATGAGAAATAGGGGTGG+TGG + chr3_4:49824225-49824244 Msa0504780:five_prime_UTR 55.0%
!! AATAGGGGTGGTGGGATAGG+TGG + chr3_4:49824234-49824253 Msa0504780:five_prime_UTR 55.0%
TGCTGAGGATGCATCATCGG+CGG - chr3_4:49824315-49824334 None:intergenic 55.0%
! TCCTGCATTTGGTGGTCCCA+TGG + chr3_4:49824356-49824375 Msa0504780:five_prime_UTR 55.0%
! CCTGCATTTGGTGGTCCCAT+GGG + chr3_4:49824357-49824376 Msa0504780:five_prime_UTR 55.0%
TGGTGGTCCCATGGGTAGAA+TGG + chr3_4:49824365-49824384 Msa0504780:five_prime_UTR 55.0%
! GGTAGAATGGCAGGCTTTGG+AGG + chr3_4:49824378-49824397 Msa0504780:five_prime_UTR 55.0%
! TGAGGCATCATCCCCGAGAA+TGG - chr3_4:49824426-49824445 None:intergenic 55.0%
!! GTTGGAGGTGTTGGTTTGCC+TGG + chr3_4:49824456-49824475 Msa0504780:five_prime_UTR 55.0%
GGAAGAGGGATGCCTGTGAA+TGG + chr3_4:49824510-49824529 Msa0504780:five_prime_UTR 55.0%
ATGGGGATGATGCCCCAATC+GGG + chr3_4:49824534-49824553 Msa0504780:five_prime_UTR 55.0%
GATGATGCCCCAATCGGGTA+TGG + chr3_4:49824539-49824558 Msa0504780:five_prime_UTR 55.0%
ATGCCCCAATCGGGTATGGA+TGG + chr3_4:49824543-49824562 Msa0504780:five_prime_UTR 55.0%
GGACCATCCATACCCGATTG+GGG - chr3_4:49824549-49824568 None:intergenic 55.0%
TGGCCGGATCCAAATATGGG+CGG + chr3_4:49824582-49824601 Msa0504780:five_prime_UTR 55.0%
CGGATCCAAATATGGGCGGA+TGG + chr3_4:49824586-49824605 Msa0504780:five_prime_UTR 55.0%
TTCTGCCACCCAGCTCTATC+AGG - chr3_4:49824699-49824718 None:intergenic 55.0%
AGAACCGGACCAGTCCCTTT+CGG - chr3_4:49824748-49824767 None:intergenic 55.0%
GCACCGTGATGATAGAGAGG+TGG + chr3_4:49824866-49824885 Msa0504780:five_prime_UTR 55.0%
AACGATCACGTGACCGTGGT+CGG + chr3_4:49824895-49824914 Msa0504780:five_prime_UTR 55.0%
! CTCGAGACTTTTCCCGACCA+CGG - chr3_4:49824911-49824930 None:intergenic 55.0%
TCGAGATCGTGAGCGCGAAA+GGG + chr3_4:49824926-49824945 Msa0504780:five_prime_UTR 55.0%
ATCGTGAGCGGGACAGATAC+AGG + chr3_4:49824958-49824977 Msa0504780:five_prime_UTR 55.0%
TCGTGAGCGGGACAGATACA+GGG + chr3_4:49824959-49824978 Msa0504780:five_prime_UTR 55.0%
CCGTGAACCAGAGCATGATG+AGG + chr3_4:49825022-49825041 Msa0504780:five_prime_UTR 55.0%
TCCCACTCCTCATCATGCTC+TGG - chr3_4:49825032-49825051 None:intergenic 55.0%
AGCATGATGAGGAGTGGGAG+CGG + chr3_4:49825033-49825052 Msa0504780:five_prime_UTR 55.0%
! GGCGTAGTGGAATCATGTGG+TGG + chr3_4:49826166-49826185 Msa0504780:intron 55.0%
! GAAGCACCACTAGTCATGGC+AGG + chr3_4:49826219-49826238 Msa0504780:intron 55.0%
!! TAGCTCAGTTGGTAGGTCCG+GGG - chr3_4:49826882-49826901 None:intergenic 55.0%
!! GATCCGGTGGCTGGTGTTGT+TGG + chr3_4:49823271-49823290 Msa0504780:five_prime_UTR 60.0%
!! GGTGGCTGGTGTTGTTGGTG+AGG + chr3_4:49823276-49823295 Msa0504780:five_prime_UTR 60.0%
!! TGGTGGTGGAGGAGGTGAAG+GGG + chr3_4:49823666-49823685 Msa0504780:five_prime_UTR 60.0%
CAGGTGAACCAAACTGCCGG+TGG + chr3_4:49824006-49824025 Msa0504780:five_prime_UTR 60.0%
GTGAACCAAACTGCCGGTGG+TGG + chr3_4:49824009-49824028 Msa0504780:five_prime_UTR 60.0%
GAACCAAACTGCCGGTGGTG+GGG + chr3_4:49824011-49824030 Msa0504780:five_prime_UTR 60.0%
TAACCCCACCACCGGCAGTT+TGG - chr3_4:49824017-49824036 None:intergenic 60.0%
GTGGGGTTAACCCGGGAAGA+AGG + chr3_4:49824028-49824047 Msa0504780:five_prime_UTR 60.0%
GGGGTTAACCCGGGAAGAAG+GGG + chr3_4:49824030-49824049 Msa0504780:five_prime_UTR 60.0%
GGGTTAACCCGGGAAGAAGG+GGG + chr3_4:49824031-49824050 Msa0504780:five_prime_UTR 60.0%
AAGAAGGGGGCCTGCTGATG+TGG + chr3_4:49824044-49824063 Msa0504780:five_prime_UTR 60.0%
AGAAGGGGGCCTGCTGATGT+GGG + chr3_4:49824045-49824064 Msa0504780:five_prime_UTR 60.0%
GGCTTAGCTCCCACATCAGC+AGG - chr3_4:49824057-49824076 None:intergenic 60.0%
GCTGATGTGGGAGCTAAGCC+TGG + chr3_4:49824057-49824076 Msa0504780:five_prime_UTR 60.0%
GATGTGGGAGCTAAGCCTGG+TGG + chr3_4:49824060-49824079 Msa0504780:five_prime_UTR 60.0%
GGTCCTCTACCACCCATACC+AGG - chr3_4:49824198-49824217 None:intergenic 60.0%
!! GGTGGTGGGATAGGTGGTAG+AGG + chr3_4:49824240-49824259 Msa0504780:five_prime_UTR 60.0%
CTGAGGATGCATCATCGGCG+GGG - chr3_4:49824313-49824332 None:intergenic 60.0%
GCTGAGGATGCATCATCGGC+GGG - chr3_4:49824314-49824333 None:intergenic 60.0%
CCCATGGGACCACCAAATGC+AGG - chr3_4:49824360-49824379 None:intergenic 60.0%
GGTCCCATGGGTAGAATGGC+AGG + chr3_4:49824369-49824388 Msa0504780:five_prime_UTR 60.0%
!! GCAGGCTTTGGAGGCTATCC+CGG + chr3_4:49824387-49824406 Msa0504780:five_prime_UTR 60.0%
TGGTCCGGCACCTCCATTCT+CGG + chr3_4:49824410-49824429 Msa0504780:five_prime_UTR 60.0%
! ATCCCCGAGAATGGAGGTGC+CGG - chr3_4:49824417-49824436 None:intergenic 60.0%
GGCATCATCCCCGAGAATGG+AGG - chr3_4:49824423-49824442 None:intergenic 60.0%
CCACCCCATCCGCCCATATT+TGG - chr3_4:49824594-49824613 None:intergenic 60.0%
CCAAATATGGGCGGATGGGG+TGG + chr3_4:49824591-49824610 Msa0504780:five_prime_UTR 60.0%
!! TGAGGAACCTGGTGGTGGCA+GGG + chr3_4:49824614-49824633 Msa0504780:five_prime_UTR 60.0%
!! GGATCCGAAAGGGACTGGTC+CGG + chr3_4:49824741-49824760 Msa0504780:five_prime_UTR 60.0%
GGTCCGGTTCTTCTGAGCGA+AGG + chr3_4:49824757-49824776 Msa0504780:five_prime_UTR 60.0%
ACGATCACGTGACCGTGGTC+GGG + chr3_4:49824896-49824915 Msa0504780:five_prime_UTR 60.0%
CTCGAGATCGTGAGCGCGAA+AGG + chr3_4:49824925-49824944 Msa0504780:five_prime_UTR 60.0%
CGAGATCGTGAGCGCGAAAG+GGG + chr3_4:49824927-49824946 Msa0504780:five_prime_UTR 60.0%
GAGATCGTGAGCGCGAAAGG+GGG + chr3_4:49824928-49824947 Msa0504780:five_prime_UTR 60.0%
AGATCGTGAGCGCGAAAGGG+GGG + chr3_4:49824929-49824948 Msa0504780:five_prime_UTR 60.0%
GCATGATGAGGAGTGGGAGC+GGG + chr3_4:49825034-49825053 Msa0504780:five_prime_UTR 60.0%
CATGATGAGGAGTGGGAGCG+GGG + chr3_4:49825035-49825054 Msa0504780:five_prime_UTR 60.0%
ATGATGAGGAGTGGGAGCGG+GGG + chr3_4:49825036-49825055 Msa0504780:five_prime_UTR 60.0%
TGTGGCCCTGCCATGACTAG+TGG - chr3_4:49826228-49826247 None:intergenic 60.0%
ACTAGTCATGGCAGGGCCAC+AGG + chr3_4:49826227-49826246 Msa0504780:intron 60.0%
TAGGTCCGGGGTTCAAACCC+CGG - chr3_4:49826870-49826889 None:intergenic 60.0%
GGTGTTCAGGATCCGGTGGC+TGG + chr3_4:49823262-49823281 Msa0504780:five_prime_UTR 65.0%
!! GGAGTTGGATCGGGTACCGG+TGG + chr3_4:49823376-49823395 Msa0504780:five_prime_UTR 65.0%
!! GTTGGATCGGGTACCGGTGG+TGG + chr3_4:49823379-49823398 Msa0504780:five_prime_UTR 65.0%
!! GGTGGTGGAGGAGGTGAAGG+GGG + chr3_4:49823667-49823686 Msa0504780:five_prime_UTR 65.0%
! GGAGGTGAAGGGGGAGGTGT+TGG + chr3_4:49823676-49823695 Msa0504780:five_prime_UTR 65.0%
!! GGTGAAGGGGGAGGTGTTGG+TGG + chr3_4:49823679-49823698 Msa0504780:five_prime_UTR 65.0%
!! GAAGGGGGAGGTGTTGGTGG+TGG + chr3_4:49823682-49823701 Msa0504780:five_prime_UTR 65.0%
!! GGAGGTGTTGGTGGTGGAGG+AGG + chr3_4:49823688-49823707 Msa0504780:five_prime_UTR 65.0%
!! GGTGTTGGTGGTGGAGGAGG+TGG + chr3_4:49823691-49823710 Msa0504780:five_prime_UTR 65.0%
!! GTTGGTGGTGGAGGAGGTGG+TGG + chr3_4:49823694-49823713 Msa0504780:five_prime_UTR 65.0%
!! TGCCGGTGGTGGGGTTAACC+CGG + chr3_4:49824020-49824039 Msa0504780:five_prime_UTR 65.0%
TCCCGGGTTAACCCCACCAC+CGG - chr3_4:49824025-49824044 None:intergenic 65.0%
TCAGCAGGCCCCCTTCTTCC+CGG - chr3_4:49824042-49824061 None:intergenic 65.0%
!! GGCTTTGGAGGCTATCCCGG+TGG + chr3_4:49824390-49824409 Msa0504780:five_prime_UTR 65.0%
TGGAGGCTATCCCGGTGGTC+CGG + chr3_4:49824395-49824414 Msa0504780:five_prime_UTR 65.0%
!! AATGGAGGTGCCGGACCACC+GGG - chr3_4:49824408-49824427 None:intergenic 65.0%
!! GAATGGAGGTGCCGGACCAC+CGG - chr3_4:49824409-49824428 None:intergenic 65.0%
GGTCCGGCACCTCCATTCTC+GGG + chr3_4:49824411-49824430 Msa0504780:five_prime_UTR 65.0%
GTCCGGCACCTCCATTCTCG+GGG + chr3_4:49824412-49824431 Msa0504780:five_prime_UTR 65.0%
TATGGGCGGATGGGGTGGTG+AGG + chr3_4:49824596-49824615 Msa0504780:five_prime_UTR 65.0%
GGATGGGGTGGTGAGGAACC+TGG + chr3_4:49824603-49824622 Msa0504780:five_prime_UTR 65.0%
TGGGGTGGTGAGGAACCTGG+TGG + chr3_4:49824606-49824625 Msa0504780:five_prime_UTR 65.0%
GGTGGTGAGGAACCTGGTGG+TGG + chr3_4:49824609-49824628 Msa0504780:five_prime_UTR 65.0%
!! GTGAGGAACCTGGTGGTGGC+AGG + chr3_4:49824613-49824632 Msa0504780:five_prime_UTR 65.0%
CGCGAACGATCACGTGACCG+TGG + chr3_4:49824891-49824910 Msa0504780:five_prime_UTR 65.0%
GGGGGGATCGAGATCGTGAG+CGG + chr3_4:49824946-49824965 Msa0504780:five_prime_UTR 65.0%
GGGGGATCGAGATCGTGAGC+GGG + chr3_4:49824947-49824966 Msa0504780:five_prime_UTR 65.0%
AGTGGCCGGGGTTTGAACCC+CGG + chr3_4:49826862-49826881 Msa0504780:intron 65.0%
!! GGATCGGGTACCGGTGGTGG+TGG + chr3_4:49823382-49823401 Msa0504780:five_prime_UTR 70.0%
GGTGGAGGAGGTGAAGGGGG+AGG + chr3_4:49823670-49823689 Msa0504780:five_prime_UTR 70.0%
!! GGGGGAGGTGTTGGTGGTGG+AGG + chr3_4:49823685-49823704 Msa0504780:five_prime_UTR 70.0%
!! GGTGGTGGAGGAGGTGGTGG+AGG + chr3_4:49823697-49823716 Msa0504780:five_prime_UTR 70.0%
!! GCCGGTGGTGGGGTTAACCC+GGG + chr3_4:49824021-49824040 Msa0504780:five_prime_UTR 70.0%
CAGCAGGCCCCCTTCTTCCC+GGG - chr3_4:49824041-49824060 None:intergenic 70.0%
!! GAACCTGGTGGTGGCAGGGC+TGG + chr3_4:49824618-49824637 Msa0504780:five_prime_UTR 70.0%
TCTCCAGCCCTGCCACCACC+AGG - chr3_4:49824624-49824643 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 49822807 49827836 49822807 ID=Msa0504780;Name=Msa0504780
chr3_4 mRNA 49822807 49827836 49822807 ID=Msa0504780-mRNA-1;Parent=Msa0504780;Name=Msa0504780-mRNA-1;_AED=0.00;_eAED=0.00;_QI=2411|1|1|1|0|0.5|2|354|96
chr3_4 exon 49822807 49825337 49822807 ID=Msa0504780-mRNA-1:exon:10714;Parent=Msa0504780-mRNA-1
chr3_4 exon 49827312 49827836 49827312 ID=Msa0504780-mRNA-1:exon:10715;Parent=Msa0504780-mRNA-1
chr3_4 five_prime_UTR 49822807 49825217 49822807 ID=Msa0504780-mRNA-1:five_prime_utr;Parent=Msa0504780-mRNA-1
chr3_4 CDS 49825218 49825337 49825218 ID=Msa0504780-mRNA-1:cds;Parent=Msa0504780-mRNA-1
chr3_4 CDS 49827312 49827482 49827312 ID=Msa0504780-mRNA-1:cds;Parent=Msa0504780-mRNA-1
chr3_4 three_prime_UTR 49827483 49827836 49827483 ID=Msa0504780-mRNA-1:three_prime_utr;Parent=Msa0504780-mRNA-1
Gene Sequence

>Msa0504780

ATGGTTGTTTGGGTTTTCTGGTGGTGCTCCTCCGACCTAGAAGTTGTTGAGCAGCTGCTATTTCATTCACTTGTTCCAGTTGCATCTTGTCAGGAGTGTTTTTGCTCTCCTATGGAAATGGGACAATTGTTTGAGAAACGATACTGTTCATCTAAACCACTGGGTTGCTTTGAGGATCAAGTGCCATCAATATTGAAGAGCCAAGTCATGACAATCCTTTTTCTTACATTGAGAGTTGGAACTTTTGCTATGAAGATATTCACTTATGATTTGAATTTATGTTTTTATTAG
Protein sequence

>Msa0504780

MVVWVFWWCSSDLEVVEQLLFHSLVPVASCQECFCSPMEMGQLFEKRYCSSKPLGCFEDQVPSILKSQVMTILFLTLRVGTFAMKIFTYDLNLCFY*