AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0363640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0363640 MtrunA17_Chr3g0102381 94.915 59 3 0 38 96 1 59 3.85e-36 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 343 sgRNAs with CRISPR-Local

Find 519 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATGAATCTAGGGTTTC+TGG 0.047637 3_1:-56247397 Msa0363640:five_prime_UTR
TCATCACGGTGCTTTCTTTC+TGG 0.103454 3_1:+56245870 None:intergenic
CACCAGCTTCATCCATTATT+AGG 0.154883 3_1:+56247686 None:intergenic
GTACCGGTGGTGGTGGAATT+AGG 0.159122 3_1:-56247327 Msa0363640:five_prime_UTR
TGCTTTCTTTCTGGCCATTC+AGG 0.192105 3_1:+56245879 None:intergenic
CCACCCCATCCGCCCATATT+TGG 0.212636 3_1:+56246134 None:intergenic
TTCACTCATCTAATCTTCTT+TGG 0.224618 3_1:+56247903 None:intergenic
ACCATTCATCCCTTCCTTAC+AGG 0.228120 3_1:+56246832 None:intergenic
GGGTTTAGAGGAGGGAATTC+TGG 0.238887 3_1:-56247361 Msa0363640:five_prime_UTR
ATGAATGGTCATTCGTTTAA+TGG 0.249585 3_1:-56246818 Msa0363640:five_prime_UTR
CTGTCAATCCGATGAGAAAT+AGG 0.252618 3_1:-56246508 Msa0363640:five_prime_UTR
GTTGGTGGTGGAGGAGGTGG+TGG 0.255621 3_1:-56247031 Msa0363640:five_prime_UTR
GGGTATGGATGGTCCTAATA+TGG 0.258478 3_1:-56246171 Msa0363640:five_prime_UTR
GGTGTTGGTGGTGGAGGAGG+TGG 0.269109 3_1:-56247034 Msa0363640:five_prime_UTR
CGGTATACTAACTAACTGTT+AGG 0.274383 3_1:+56243361 None:intergenic
CAGGATTTGTCATGGTTGTT+TGG 0.277956 3_1:-56245518 Msa0363640:exon
GTGAGGAACCTGGTGGTGGC+AGG 0.283008 3_1:-56246112 Msa0363640:five_prime_UTR
GGAGGTGTTGGTGGTGGAGG+AGG 0.283109 3_1:-56247037 Msa0363640:five_prime_UTR
AGGTCAAAAGATGCTGATTA+TGG 0.291684 3_1:-56245609 Msa0363640:five_prime_UTR
GAACCTGGTGGTGGCAGGGC+TGG 0.298264 3_1:-56246107 Msa0363640:five_prime_UTR
ACCAGCTTCATCCATTATTA+GGG 0.298451 3_1:+56247687 None:intergenic
AATAATAACAATAGAGGTTA+TGG 0.305047 3_1:-56246581 Msa0363640:five_prime_UTR
TACATCATAATACACAAAAT+TGG 0.306899 3_1:+56243328 None:intergenic
AGGATTTGTCATGGTTGTTT+GGG 0.311064 3_1:-56245517 Msa0363640:exon
TTCTGCCACCCAGCTCTATC+AGG 0.319704 3_1:+56246029 None:intergenic
AGGTTATGGAAGAGGTAATT+GGG 0.321683 3_1:-56246567 Msa0363640:five_prime_UTR
GTGGAGGGGTTAATCTTAAT+AGG 0.323062 3_1:-56247120 Msa0363640:five_prime_UTR
GAATGATGGTGTTGGAGTTC+AGG 0.324217 3_1:-56247248 Msa0363640:five_prime_UTR
TCCTCAGCAAATTATGAATC+AGG 0.325362 3_1:-56246399 Msa0363640:five_prime_UTR
GAGGTTATGGAAGAGGTAAT+TGG 0.327457 3_1:-56246568 Msa0363640:five_prime_UTR
CTTAATAGGGTTGGAGGAAA+TGG 0.331429 3_1:-56247106 Msa0363640:five_prime_UTR
ATAGGTGGTAGAGGTATAAT+TGG 0.332537 3_1:-56246476 Msa0363640:five_prime_UTR
AGTGGTGTTGTTGGTGGTGG+AGG 0.332763 3_1:-56247136 Msa0363640:five_prime_UTR
AGGAAGTACTTTGTTATTTG+TGG 0.333873 3_1:-56247008 Msa0363640:five_prime_UTR
TCCGGCCACATTCCCATATT+AGG 0.337509 3_1:+56246158 None:intergenic
CAACTCTCAATGTAAGAAAA+AGG 0.342603 3_1:+56243628 None:intergenic
GCAGCTGCTCAACAACTTCT+AGG 0.342971 3_1:+56245472 None:intergenic
TGGGCGAGGCTCAGAATAAT+AGG 0.346521 3_1:-56246748 Msa0363640:five_prime_UTR
TGGTCCGGCACCTCCATTCT+CGG 0.347346 3_1:-56246315 Msa0363640:five_prime_UTR
AATGTGGCCGGATCCAAATA+TGG 0.348257 3_1:-56246147 Msa0363640:five_prime_UTR
TCAATCGGGTTCTGGTGTTC+AGG 0.352631 3_1:-56247467 Msa0363640:five_prime_UTR
ACAAAATTGGCATGCTCAAC+CGG 0.355849 3_1:+56243341 None:intergenic
GGTGGAATTAGGGTTGAATT+AGG 0.356484 3_1:-56247316 Msa0363640:five_prime_UTR
GGGATGATGCCTCAATTTCC+TGG 0.360064 3_1:-56246293 Msa0363640:five_prime_UTR
TACCGGTGGTGGTGGAATTA+GGG 0.363590 3_1:-56247326 Msa0363640:five_prime_UTR
GGTAATGGTGGAAATGGATT+TGG 0.364183 3_1:-56246455 Msa0363640:five_prime_UTR
ACCAATGTTGTTGATGTAAT+GGG 0.366164 3_1:-56243541 Msa0363640:three_prime_UTR
GTGATGAATCTAGGGTTTCT+GGG 0.368364 3_1:-56247396 Msa0363640:five_prime_UTR
GGTGGTGGAGGAGGTGGTGG+AGG 0.371298 3_1:-56247028 Msa0363640:five_prime_UTR
ATTGGTGGTGGAGGAGGTGA+AGG 0.371730 3_1:-56247061 Msa0363640:five_prime_UTR
ATAATTGGTAATGGTGGAAA+TGG 0.371958 3_1:-56246461 Msa0363640:five_prime_UTR
GTTGGAGGTGTTGGTTTGCC+TGG 0.373316 3_1:-56246269 Msa0363640:five_prime_UTR
GGAAATAATGTTATTGCTAT+TGG 0.375081 3_1:-56247079 Msa0363640:five_prime_UTR
ATCGTGAGCGGGACAGATAC+AGG 0.379036 3_1:-56245767 Msa0363640:five_prime_UTR
AAGAAGGTTCAATCGGGTTC+TGG 0.380389 3_1:-56247475 Msa0363640:five_prime_UTR
ACTTGGCTCTTCAATATTGA+TGG 0.382023 3_1:+56243660 None:intergenic
GTTGAATTAGGTCAAGCATC+TGG 0.388751 3_1:-56247304 Msa0363640:five_prime_UTR
GAAGCTGAGTTATGCAAGTA+TGG 0.393302 3_1:-56246950 Msa0363640:five_prime_UTR
ATGGGTAGAATGGCAGGCTT+TGG 0.395593 3_1:-56246350 Msa0363640:five_prime_UTR
TGAATGGTCATTCGTTTAAT+GGG 0.398915 3_1:-56246817 Msa0363640:five_prime_UTR
GCATGATGAGGAGTGGGAGC+GGG 0.399423 3_1:-56245691 Msa0363640:five_prime_UTR
TGTTCCAGTTGCATCTTGTC+AGG 0.399601 3_1:-56245436 Msa0363640:CDS
GTGGTGTTGTTGGTGGTGGA+GGG 0.400261 3_1:-56247135 Msa0363640:five_prime_UTR
TTTCAGAATCAAGGGTTTAG+AGG 0.400665 3_1:-56247373 Msa0363640:five_prime_UTR
GTGGGGTTAACCCGGGAAGA+AGG 0.401244 3_1:-56246697 Msa0363640:five_prime_UTR
GGGACAGATACAGGGAAGAT+AGG 0.403470 3_1:-56245758 Msa0363640:five_prime_UTR
AGAAATAGGGGTGGTGGGAT+AGG 0.404535 3_1:-56246494 Msa0363640:five_prime_UTR
AACCAATGTTGTTGATGTAA+TGG 0.405200 3_1:-56243542 Msa0363640:three_prime_UTR
TGTCAATCCGATGAGAAATA+GGG 0.407839 3_1:-56246507 Msa0363640:five_prime_UTR
TAACCCCACCACCGGCAGTT+TGG 0.409185 3_1:+56246711 None:intergenic
TTTCCTGGTGTTGGAGGTGT+TGG 0.411185 3_1:-56246278 Msa0363640:five_prime_UTR
AATGGATTTGGACAGGGTAT+TGG 0.411699 3_1:-56246443 Msa0363640:five_prime_UTR
AGGACCATCCATACCCGATT+GGG 0.412131 3_1:+56246178 None:intergenic
GATTCGGGTGGTAGAATTGA+TGG 0.413403 3_1:-56247508 Msa0363640:five_prime_UTR
TGAACAACTTCTCACACGTT+AGG 0.415605 3_1:-56247884 Msa0363640:five_prime_UTR
TTGTGGGTGATTTGCATTGG+TGG 0.416148 3_1:-56246991 Msa0363640:five_prime_UTR
TGATGGGGTTGATGAGAAGA+AGG 0.416268 3_1:-56247491 Msa0363640:five_prime_UTR
TAAACCACTGGGTTGCTTTG+AGG 0.417950 3_1:-56243691 Msa0363640:CDS
GGTGGTGGAGGAGGTGAAGG+GGG 0.418334 3_1:-56247058 Msa0363640:five_prime_UTR
CACTCCTGACAAGATGCAAC+TGG 0.421248 3_1:+56245432 None:intergenic
GGGGTTAACCCGGGAAGAAG+GGG 0.421478 3_1:-56246695 Msa0363640:five_prime_UTR
TGCCGGTGGTGGGGTTAACC+CGG 0.424708 3_1:-56246705 Msa0363640:five_prime_UTR
AGGATGAGGAACACCATTCT+AGG 0.426512 3_1:-56245629 Msa0363640:five_prime_UTR
GCTGATGTGGGAGCTAAGCC+TGG 0.428646 3_1:-56246668 Msa0363640:five_prime_UTR
TTGGTGGTGGTGATGAATCT+AGG 0.429880 3_1:-56247405 Msa0363640:five_prime_UTR
GGTAATTATCAAGGTGGAGA+TGG 0.429965 3_1:-56246623 Msa0363640:five_prime_UTR
GATCCGGTGGCTGGTGTTGT+TGG 0.430804 3_1:-56247445 Msa0363640:five_prime_UTR
CTCAACCTGACAATACCCTT+TGG 0.430864 3_1:+56246880 None:intergenic
GTTTCTGGGTTTCAGAATCA+AGG 0.432968 3_1:-56247382 Msa0363640:five_prime_UTR
GGTCCGGCACCTCCATTCTC+GGG 0.437687 3_1:-56246314 Msa0363640:five_prime_UTR
ATGCCTCAATTTCCTGGTGT+TGG 0.438968 3_1:-56246287 Msa0363640:five_prime_UTR
ATAGCAATAACATTATTTCC+AGG 0.442010 3_1:+56247082 None:intergenic
AATGATGGTGTTGGAGTTCA+GGG 0.442743 3_1:-56247247 Msa0363640:five_prime_UTR
TGGTGGTGGAGGAGGTGAAG+GGG 0.443449 3_1:-56247059 Msa0363640:five_prime_UTR
CCAGCTTTACAGTAATTGAA+TGG 0.444719 3_1:+56243296 None:intergenic
GTTGAGGAAGAATGATGATT+CGG 0.444981 3_1:-56247524 Msa0363640:five_prime_UTR
AATTGTTTGAATGATGTACT+AGG 0.446159 3_1:-56243474 Msa0363640:three_prime_UTR
CCTCAATTTCCTGGTGTTGG+AGG 0.446456 3_1:-56246284 Msa0363640:five_prime_UTR
GGTGGTGAGGAACCTGGTGG+TGG 0.446918 3_1:-56246116 Msa0363640:five_prime_UTR
CCTCATCATGCTCTGGTTCA+CGG 0.446985 3_1:+56245703 None:intergenic
GTTGGATCGGGTACCGGTGG+TGG 0.448718 3_1:-56247337 Msa0363640:five_prime_UTR
TGAGGAACCTGGTGGTGGCA+GGG 0.451354 3_1:-56246111 Msa0363640:five_prime_UTR
TGGTGGAAATGGATTTGGAC+AGG 0.453155 3_1:-56246450 Msa0363640:five_prime_UTR
GGCTTAGCTCCCACATCAGC+AGG 0.453413 3_1:+56246671 None:intergenic
TCAGAATAATAGGAATCAAC+AGG 0.455870 3_1:-56246738 Msa0363640:five_prime_UTR
GTACCTTCGCTCAGAAGAAC+CGG 0.456411 3_1:+56245965 None:intergenic
GGGATGCCTGTGAATGGAAT+GGG 0.457540 3_1:-56246209 Msa0363640:five_prime_UTR
TCCCACTCCTCATCATGCTC+TGG 0.460102 3_1:+56245696 None:intergenic
GGGTTCTGGTGTTCAGGATC+CGG 0.460531 3_1:-56247461 Msa0363640:five_prime_UTR
GGTAGAATGGCAGGCTTTGG+AGG 0.461925 3_1:-56246347 Msa0363640:five_prime_UTR
ATATGCTGCAACTGCCTGTA+AGG 0.462613 3_1:-56246846 Msa0363640:five_prime_UTR
GGTCCCATGGGTAGAATGGC+AGG 0.463195 3_1:-56246356 Msa0363640:five_prime_UTR
TCCTGCATTTGGTGGTCCCA+TGG 0.463497 3_1:-56246369 Msa0363640:five_prime_UTR
ATTGCTATTGGTGGTGGAGG+AGG 0.463547 3_1:-56247067 Msa0363640:five_prime_UTR
GGGAATTCTGGAGTTGGATC+GGG 0.463677 3_1:-56247349 Msa0363640:five_prime_UTR
CTATTTCTCATCGGATTGAC+AGG 0.464317 3_1:+56246509 None:intergenic
AGAGGAGGGAATTCTGGAGT+TGG 0.464640 3_1:-56247355 Msa0363640:five_prime_UTR
CAACAACATGGTGGTGTTGT+TGG 0.464811 3_1:-56247187 Msa0363640:five_prime_UTR
GGGCTGGAGAGTCAAGTTAT+GGG 0.464924 3_1:-56246091 Msa0363640:five_prime_UTR
TGATGAGAAGAAGGTTCAAT+CGG 0.466730 3_1:-56247482 Msa0363640:five_prime_UTR
GAACAACTTCTCACACGTTA+GGG 0.467739 3_1:-56247883 Msa0363640:five_prime_UTR
AGAACCGGACCAGTCCCTTT+CGG 0.468266 3_1:+56245980 None:intergenic
GTGAACCAAACTGCCGGTGG+TGG 0.468522 3_1:-56246716 Msa0363640:five_prime_UTR
GATGATGCCCCAATCGGGTA+TGG 0.468653 3_1:-56246186 Msa0363640:five_prime_UTR
AACAATAATAATAACAATAG+AGG 0.469203 3_1:-56246587 Msa0363640:five_prime_UTR
TTGAGGAAGAATGATGATTC+GGG 0.469398 3_1:-56247523 Msa0363640:five_prime_UTR
TACAGGGATGATAGAGATCA+AGG 0.470663 3_1:-56245945 Msa0363640:five_prime_UTR
CCAAGTGGTGTTGTTGGTGG+TGG 0.473693 3_1:-56247139 Msa0363640:five_prime_UTR
ACAGATATGCTGATCATCAT+AGG 0.474123 3_1:-56245734 Msa0363640:five_prime_UTR
AGCATGATGAGGAGTGGGAG+CGG 0.475393 3_1:-56245692 Msa0363640:five_prime_UTR
GGATGGGGTGGTGAGGAACC+TGG 0.475809 3_1:-56246122 Msa0363640:five_prime_UTR
TGAGGCATCATCCCCGAGAA+TGG 0.475990 3_1:+56246302 None:intergenic
GGATCGGGTACCGGTGGTGG+TGG 0.476347 3_1:-56247334 Msa0363640:five_prime_UTR
ATTCGGGTGGTAGAATTGAT+GGG 0.477455 3_1:-56247507 Msa0363640:five_prime_UTR
CCAAATATGGGCGGATGGGG+TGG 0.477803 3_1:-56246134 Msa0363640:five_prime_UTR
ACGATCACGTGACCGTGGTC+GGG 0.478106 3_1:-56245829 Msa0363640:five_prime_UTR
CTCGAGATCGTGAGCGCGAA+AGG 0.479654 3_1:-56245800 Msa0363640:five_prime_UTR
ATCAAAACAGCGTCGTTGAA+AGG 0.480084 3_1:+56247773 None:intergenic
GGATCCAAATATGGGCGGAT+GGG 0.480574 3_1:-56246138 Msa0363640:five_prime_UTR
TGGAGGCTATCCCGGTGGTC+CGG 0.480694 3_1:-56246330 Msa0363640:five_prime_UTR
TGGGGTTAACCCGGGAAGAA+GGG 0.481851 3_1:-56246696 Msa0363640:five_prime_UTR
CCATTCAATTACTGTAAAGC+TGG 0.482158 3_1:-56243296 Msa0363640:three_prime_UTR
CAAGTTCCAAGTGGTGTTGT+TGG 0.482440 3_1:-56247145 Msa0363640:five_prime_UTR
GATCCAAATATGGGCGGATG+GGG 0.482985 3_1:-56246137 Msa0363640:five_prime_UTR
GGTAGAGGTATAATTGGTAA+TGG 0.483294 3_1:-56246470 Msa0363640:five_prime_UTR
CATCCGCCCATATTTGGATC+CGG 0.484005 3_1:+56246140 None:intergenic
GGTGTTCAGGATCCGGTGGC+TGG 0.484127 3_1:-56247454 Msa0363640:five_prime_UTR
GTAATTATCAAGGTGGAGAT+GGG 0.484547 3_1:-56246622 Msa0363640:five_prime_UTR
GAATGGAGGTGCCGGACCAC+CGG 0.484600 3_1:+56246319 None:intergenic
TCTCCAGCCCTGCCACCACC+AGG 0.485249 3_1:+56246104 None:intergenic
GTGGACTACTGATGCTGAGC+TGG 0.485315 3_1:-56246972 Msa0363640:five_prime_UTR
TGGAGGGGTTAATCTTAATA+GGG 0.485764 3_1:-56247119 Msa0363640:five_prime_UTR
GCTGAGGATGCATCATCGGC+GGG 0.488538 3_1:+56246414 None:intergenic
GGAAGTACTTTGTTATTTGT+GGG 0.488708 3_1:-56247007 Msa0363640:five_prime_UTR
AGGGCTGGAGAGTCAAGTTA+TGG 0.489172 3_1:-56246092 Msa0363640:five_prime_UTR
AACAATAGAGGTTATGGAAG+AGG 0.489326 3_1:-56246575 Msa0363640:five_prime_UTR
GCAGCATCAGACCATCAGTA+TGG 0.490533 3_1:-56246062 Msa0363640:five_prime_UTR
CTGGGTGGCAGAATAATATG+AGG 0.491968 3_1:-56246019 Msa0363640:five_prime_UTR
TCAAAACAGCGTCGTTGAAA+GGG 0.495678 3_1:+56247774 None:intergenic
GCCTGTAAGGAAGGGATGAA+TGG 0.495821 3_1:-56246833 Msa0363640:five_prime_UTR
GGGTTAACCCGGGAAGAAGG+GGG 0.495920 3_1:-56246694 Msa0363640:five_prime_UTR
TGGTGGTCCCATGGGTAGAA+TGG 0.496209 3_1:-56246360 Msa0363640:five_prime_UTR
GGAAGAGGTAATTGGGGTAG+AGG 0.496528 3_1:-56246560 Msa0363640:five_prime_UTR
AGGGAATTCTGGAGTTGGAT+CGG 0.496738 3_1:-56247350 Msa0363640:five_prime_UTR
GAGGGAGTGAAGAGTGTTGG+TGG 0.496817 3_1:-56247421 Msa0363640:five_prime_UTR
GGGGTTAATCTTAATAGGGT+TGG 0.497622 3_1:-56247115 Msa0363640:five_prime_UTR
GTTATTGCTATTGGTGGTGG+AGG 0.497635 3_1:-56247070 Msa0363640:five_prime_UTR
TAGAGGGAACAATCCTGGTA+TGG 0.498649 3_1:-56246543 Msa0363640:five_prime_UTR
CATGATGAGGAGTGGGAGCG+GGG 0.499344 3_1:-56245690 Msa0363640:five_prime_UTR
TGGTGTTGTTGGTGGTGGAG+GGG 0.502558 3_1:-56247134 Msa0363640:five_prime_UTR
GTGGCTGGTGTTGTTGGTGA+GGG 0.503570 3_1:-56247439 Msa0363640:five_prime_UTR
GTTCTTCTGAGCGAAGGTAC+AGG 0.505164 3_1:-56245962 Msa0363640:five_prime_UTR
AACGATCACGTGACCGTGGT+CGG 0.505395 3_1:-56245830 Msa0363640:five_prime_UTR
CCGATGAGAAATAGGGGTGG+TGG 0.506509 3_1:-56246500 Msa0363640:five_prime_UTR
GGAAGAGGGATGCCTGTGAA+TGG 0.507911 3_1:-56246215 Msa0363640:five_prime_UTR
GCAGGCTTTGGAGGCTATCC+CGG 0.508698 3_1:-56246338 Msa0363640:five_prime_UTR
ATGTGGCCGGATCCAAATAT+GGG 0.509782 3_1:-56246146 Msa0363640:five_prime_UTR
AATGTTATTGCTATTGGTGG+TGG 0.512566 3_1:-56247073 Msa0363640:five_prime_UTR
TATTTGTGGGTGATTTGCAT+TGG 0.512963 3_1:-56246994 Msa0363640:five_prime_UTR
CAACATTAACATCGTTGTAA+AGG 0.513179 3_1:+56247566 None:intergenic
ATCATCCCCATTCCATTCAC+AGG 0.513647 3_1:+56246203 None:intergenic
TGGCCATTCAGGATCATGTC+CGG 0.514343 3_1:+56245890 None:intergenic
AATGGGGATGATGCCCCAAT+CGG 0.516902 3_1:-56246192 Msa0363640:five_prime_UTR
CCACCACCAACAACACCACT+TGG 0.517634 3_1:+56247139 None:intergenic
TCCCGGGTTAACCCCACCAC+CGG 0.519319 3_1:+56246703 None:intergenic
GGTGGTAGTAATATTGCAAC+TGG 0.519367 3_1:-56246647 Msa0363640:five_prime_UTR
TGGTGAGAGTGGAGATCCTA+TGG 0.519526 3_1:-56247668 Msa0363640:five_prime_UTR
TGAACCAAACTGCCGGTGGT+GGG 0.519641 3_1:-56246715 Msa0363640:five_prime_UTR
GGTATGGATGGTCCTAATAT+GGG 0.521905 3_1:-56246170 Msa0363640:five_prime_UTR
TGGTGGTGGTGATGAATCTA+GGG 0.524499 3_1:-56247404 Msa0363640:five_prime_UTR
GTTAATCTTAATAGGGTTGG+AGG 0.524976 3_1:-56247112 Msa0363640:five_prime_UTR
CTTTACAACGATGTTAATGT+TGG 0.525709 3_1:-56247565 Msa0363640:five_prime_UTR
TGGGGTAGAGGGAACAATCC+TGG 0.526032 3_1:-56246548 Msa0363640:five_prime_UTR
ATCAAGATTATCACAGGATG+AGG 0.526107 3_1:-56245643 Msa0363640:five_prime_UTR
CCTCCAACACCAGGAAATTG+AGG 0.526290 3_1:+56246284 None:intergenic
ATCCCCGAGAATGGAGGTGC+CGG 0.526530 3_1:+56246311 None:intergenic
GTTCCAAGTGGTGTTGTTGG+TGG 0.526669 3_1:-56247142 Msa0363640:five_prime_UTR
CCTGCATTTGGTGGTCCCAT+GGG 0.526946 3_1:-56246368 Msa0363640:five_prime_UTR
AATGGAGGTGCCGGACCACC+GGG 0.527390 3_1:+56246320 None:intergenic
CTAACAGTTAGTTAGTATAC+CGG 0.527731 3_1:-56243360 Msa0363640:three_prime_UTR
TTGAATTAGGTCAAGCATCT+GGG 0.528023 3_1:-56247303 Msa0363640:five_prime_UTR
AACGATGTTAATGTTGGTGA+AGG 0.529579 3_1:-56247559 Msa0363640:five_prime_UTR
TGGGAAATCGAGTGAAATTG+AGG 0.529983 3_1:-56247284 Msa0363640:five_prime_UTR
GCTGCAACTGCCTGTAAGGA+AGG 0.530594 3_1:-56246842 Msa0363640:five_prime_UTR
ATACTGTTCATCTAAACCAC+TGG 0.532755 3_1:-56243703 Msa0363640:CDS
GCAACTGGTGGTAATTATCA+AGG 0.532803 3_1:-56246632 Msa0363640:five_prime_UTR
CGGATCCAAATATGGGCGGA+TGG 0.533104 3_1:-56246139 Msa0363640:five_prime_UTR
TCGAGATCGTGAGCGCGAAA+GGG 0.533414 3_1:-56245799 Msa0363640:five_prime_UTR
ATATCTGCTGTAGCTGATGA+TGG 0.533479 3_1:-56247622 Msa0363640:five_prime_UTR
AACCCTAATTCCACCACCAC+CGG 0.533956 3_1:+56247324 None:intergenic
TCTGGAGTTGGATCGGGTAC+CGG 0.533999 3_1:-56247343 Msa0363640:five_prime_UTR
GGTGGTGGGATAGGTGGTAG+AGG 0.535372 3_1:-56246485 Msa0363640:five_prime_UTR
AATCCTGGTATGGGTGGTAG+AGG 0.535904 3_1:-56246533 Msa0363640:five_prime_UTR
TACTGTTAAGAAAATGGGCG+AGG 0.536096 3_1:-56246762 Msa0363640:five_prime_UTR
AGATACAACTAAACTGGAGA+TGG 0.536528 3_1:+56243206 None:intergenic
AGAGGTATAATTGGTAATGG+TGG 0.538059 3_1:-56246467 Msa0363640:five_prime_UTR
AGAGGGAACAATCCTGGTAT+GGG 0.539437 3_1:-56246542 Msa0363640:five_prime_UTR
TCCTAATATGGGAATGTGGC+CGG 0.540113 3_1:-56246159 Msa0363640:five_prime_UTR
GTAATACTTTCCCTTGAGGA+AGG 0.540469 3_1:-56245562 Msa0363640:five_prime_UTR
ATGGGGATGATGCCCCAATC+GGG 0.540485 3_1:-56246191 Msa0363640:five_prime_UTR
AGAATCAAGGGTTTAGAGGA+GGG 0.540567 3_1:-56247369 Msa0363640:five_prime_UTR
AGGGATGCCTGTGAATGGAA+TGG 0.540944 3_1:-56246210 Msa0363640:five_prime_UTR
ATGGATGAAGCTGGTGAGAG+TGG 0.541337 3_1:-56247679 Msa0363640:five_prime_UTR
TTAACATGAGGTGCTACTCC+AGG 0.541597 3_1:+56246251 None:intergenic
GGACAGATACAGGGAAGATA+GGG 0.545324 3_1:-56245757 Msa0363640:five_prime_UTR
AAACCAACACCTCCAACACC+AGG 0.548121 3_1:+56246275 None:intergenic
GCCCATTACATCAACAACAT+TGG 0.548356 3_1:+56243540 None:intergenic
GGTTATGGAAGAGGTAATTG+GGG 0.551409 3_1:-56246566 Msa0363640:five_prime_UTR
AATAGGGGTGGTGGGATAGG+TGG 0.551960 3_1:-56246491 Msa0363640:five_prime_UTR
ATAGAGGATCCGAAAGGGAC+TGG 0.556094 3_1:-56245989 Msa0363640:five_prime_UTR
CAGAATCAAGGGTTTAGAGG+AGG 0.556931 3_1:-56247370 Msa0363640:five_prime_UTR
GAAGAGGTAATTGGGGTAGA+GGG 0.557497 3_1:-56246559 Msa0363640:five_prime_UTR
ATTTGCTGAGGATGCATCAT+CGG 0.560332 3_1:+56246410 None:intergenic
CAGCAGATATAGCTTCGTTA+CGG 0.560404 3_1:+56247635 None:intergenic
CCCATGGGACCACCAAATGC+AGG 0.560887 3_1:+56246368 None:intergenic
ACCCTAATAATGGATGAAGC+TGG 0.561656 3_1:-56247688 Msa0363640:five_prime_UTR
TATGGGCGGATGGGGTGGTG+AGG 0.561796 3_1:-56246129 Msa0363640:five_prime_UTR
ATGCCCCAATCGGGTATGGA+TGG 0.561899 3_1:-56246182 Msa0363640:five_prime_UTR
TTGAAACTAACCATTTCCAT+AGG 0.562396 3_1:+56245399 None:intergenic
AAAGCCTGCCATTCTACCCA+TGG 0.563042 3_1:+56246352 None:intergenic
GAAATCCAAAGGGTATTGTC+AGG 0.563157 3_1:-56246885 Msa0363640:five_prime_UTR
TTGGTGGTGGAGGAGGTGAA+GGG 0.563645 3_1:-56247060 Msa0363640:five_prime_UTR
ATGCCGGACATGATCCTGAA+TGG 0.563683 3_1:-56245893 Msa0363640:five_prime_UTR
TAGGACCATCCATACCCGAT+TGG 0.564509 3_1:+56246177 None:intergenic
TTTCTGGGTTTCAGAATCAA+GGG 0.564798 3_1:-56247381 Msa0363640:five_prime_UTR
GAACCAAACTGCCGGTGGTG+GGG 0.566772 3_1:-56246714 Msa0363640:five_prime_UTR
AGAGGTGTGAATGATGGTGT+TGG 0.567936 3_1:-56247256 Msa0363640:five_prime_UTR
ACCAGAGCATGATGAGGAGT+GGG 0.568730 3_1:-56245697 Msa0363640:five_prime_UTR
GGTGAGGGAGTGAAGAGTGT+TGG 0.568963 3_1:-56247424 Msa0363640:five_prime_UTR
AAGATGCTGATTATGGAAAG+AGG 0.570662 3_1:-56245602 Msa0363640:five_prime_UTR
ATGATGAGGAGTGGGAGCGG+GGG 0.571157 3_1:-56245689 Msa0363640:five_prime_UTR
AATAATGTTATTGCTATTGG+TGG 0.571653 3_1:-56247076 Msa0363640:five_prime_UTR
GGTATACTAACTAACTGTTA+GGG 0.572693 3_1:+56243362 None:intergenic
GAGGTGAATCCTGATAGAGC+TGG 0.572872 3_1:-56246038 Msa0363640:five_prime_UTR
CCCTGATTCATAATTTGCTG+AGG 0.573148 3_1:+56246398 None:intergenic
GACGCAAAAGCAACAACACA+CGG 0.573917 3_1:+56246791 None:intergenic
GGATCCGAAAGGGACTGGTC+CGG 0.574149 3_1:-56245984 Msa0363640:five_prime_UTR
TGGGGTGGTGAGGAACCTGG+TGG 0.574865 3_1:-56246119 Msa0363640:five_prime_UTR
ATGGACAAGTGAAGGAGGTG+AGG 0.575630 3_1:-56246931 Msa0363640:five_prime_UTR
AAAAGATAGAGGATCCGAAA+GGG 0.575969 3_1:-56245994 Msa0363640:five_prime_UTR
TAATACTTTCCCTTGAGGAA+GGG 0.576745 3_1:-56245561 Msa0363640:five_prime_UTR
TTCTTCTGAGCGAAGGTACA+GGG 0.576817 3_1:-56245961 Msa0363640:five_prime_UTR
GATGAGAAGAAGGTTCAATC+GGG 0.576960 3_1:-56247481 Msa0363640:five_prime_UTR
CCACCACCCCTATTTCTCAT+CGG 0.577429 3_1:+56246500 None:intergenic
GCCGGTGGTGGGGTTAACCC+GGG 0.577492 3_1:-56246704 Msa0363640:five_prime_UTR
AAGCTAGTGGGAAATCCAAA+GGG 0.577942 3_1:-56246895 Msa0363640:five_prime_UTR
CCTCAGCAAATTATGAATCA+GGG 0.578716 3_1:-56246398 Msa0363640:five_prime_UTR
CAGTAAATCAAGATTATCAC+AGG 0.578787 3_1:-56245649 Msa0363640:five_prime_UTR
TTCTGGTGTTCAGGATCCGG+TGG 0.581128 3_1:-56247458 Msa0363640:five_prime_UTR
GGAGTTGGATCGGGTACCGG+TGG 0.581965 3_1:-56247340 Msa0363640:five_prime_UTR
CTGATTATGGAAAGAGGAGG+CGG 0.582435 3_1:-56245596 Msa0363640:five_prime_UTR
AACCAGAGCATGATGAGGAG+TGG 0.583423 3_1:-56245698 Msa0363640:five_prime_UTR
TGTTGTTGGAAACGATGGGT+TGG 0.583906 3_1:-56247173 Msa0363640:five_prime_UTR
GGTGGCTGGTGTTGTTGGTG+AGG 0.585170 3_1:-56247440 Msa0363640:five_prime_UTR
GAGAAGAAGAGTCAGAGAGA+AGG 0.585616 3_1:+56247856 None:intergenic
CGATGAGAAATAGGGGTGGT+GGG 0.587657 3_1:-56246499 Msa0363640:five_prime_UTR
TCACCAACAACACCAGCCAC+CGG 0.589770 3_1:+56247442 None:intergenic
GGTCCTCTACCACCCATACC+AGG 0.592678 3_1:+56246530 None:intergenic
TGCTGAGGATGCATCATCGG+CGG 0.595650 3_1:+56246413 None:intergenic
TTACGGTGGAACTGATCCAT+AGG 0.596056 3_1:+56247652 None:intergenic
ATGCAAGTATGGACAAGTGA+AGG 0.598593 3_1:-56246939 Msa0363640:five_prime_UTR
CTGCTCAACAACTTCTAGGT+CGG 0.598668 3_1:+56245476 None:intergenic
CAACAGGTGAACCAAACTGC+CGG 0.599970 3_1:-56246722 Msa0363640:five_prime_UTR
GAACAGAGAGGTGTGAATGA+TGG 0.600685 3_1:-56247262 Msa0363640:five_prime_UTR
AAAGCTAGTGGGAAATCCAA+AGG 0.600695 3_1:-56246896 Msa0363640:five_prime_UTR
GGTGGTGTTGTTGGAAACGA+TGG 0.604505 3_1:-56247178 Msa0363640:five_prime_UTR
GTCCGGCACCTCCATTCTCG+GGG 0.604768 3_1:-56246313 Msa0363640:five_prime_UTR
CTGCAACTGCCTGTAAGGAA+GGG 0.606830 3_1:-56246841 Msa0363640:five_prime_UTR
GGAGTGAAGAGTGTTGGTGG+TGG 0.607165 3_1:-56247418 Msa0363640:five_prime_UTR
GATTCACCTCACCATACTGA+TGG 0.608524 3_1:+56246051 None:intergenic
TTCGGGTGGTAGAATTGATG+GGG 0.609104 3_1:-56247506 Msa0363640:five_prime_UTR
CGAGATCGTGAGCGCGAAAG+GGG 0.610782 3_1:-56245798 Msa0363640:five_prime_UTR
GGTGGAAATGGATTTGGACA+GGG 0.612223 3_1:-56246449 Msa0363640:five_prime_UTR
CTCAACAACTTCTAGGTCGG+AGG 0.612813 3_1:+56245479 None:intergenic
CAGATATAGCTTCGTTACGG+TGG 0.617616 3_1:+56247638 None:intergenic
AAGCCTGCCATTCTACCCAT+GGG 0.620243 3_1:+56246353 None:intergenic
AGATCGTGAGCGCGAAAGGG+GGG 0.621518 3_1:-56245796 Msa0363640:five_prime_UTR
CAGCAGCAACAGCAACAACA+TGG 0.622643 3_1:-56247199 Msa0363640:five_prime_UTR
TCGTGAGCGGGACAGATACA+GGG 0.623073 3_1:-56245766 Msa0363640:five_prime_UTR
TACTGTTCATCTAAACCACT+GGG 0.625118 3_1:-56243702 Msa0363640:CDS
GTCAATCCGATGAGAAATAG+GGG 0.626713 3_1:-56246506 Msa0363640:five_prime_UTR
GGTCCGGTTCTTCTGAGCGA+AGG 0.627233 3_1:-56245968 Msa0363640:five_prime_UTR
CAAGTATGGACAAGTGAAGG+AGG 0.629874 3_1:-56246936 Msa0363640:five_prime_UTR
CCGTGAACCAGAGCATGATG+AGG 0.630498 3_1:-56245703 Msa0363640:five_prime_UTR
ATGGTCATTCGTTTAATGGG+AGG 0.634630 3_1:-56246814 Msa0363640:five_prime_UTR
CTGAGTAATACTTTCCCTTG+AGG 0.635714 3_1:-56245566 Msa0363640:five_prime_UTR
AGGGTTGGAGGAAATGGACC+TGG 0.637061 3_1:-56247100 Msa0363640:five_prime_UTR
GGACCATCCATACCCGATTG+GGG 0.637802 3_1:+56246179 None:intergenic
AGGTGAATCCTGATAGAGCT+GGG 0.637986 3_1:-56246037 Msa0363640:five_prime_UTR
GGGAACAATCCTGGTATGGG+TGG 0.644353 3_1:-56246539 Msa0363640:five_prime_UTR
GGCTTTGGAGGCTATCCCGG+TGG 0.645883 3_1:-56246335 Msa0363640:five_prime_UTR
GGCATCATCCCCGAGAATGG+AGG 0.646866 3_1:+56246305 None:intergenic
CGCGAACGATCACGTGACCG+TGG 0.652791 3_1:-56245834 Msa0363640:five_prime_UTR
GAGATCGTGAGCGCGAAAGG+GGG 0.653665 3_1:-56245797 Msa0363640:five_prime_UTR
AAAGCACCGTGATGATAGAG+AGG 0.654163 3_1:-56245862 Msa0363640:five_prime_UTR
ACAGGGATGATAGAGATCAA+GGG 0.654179 3_1:-56245944 Msa0363640:five_prime_UTR
GTGGTGTTGTTGGAAACGAT+GGG 0.657083 3_1:-56247177 Msa0363640:five_prime_UTR
CTGAGGATGCATCATCGGCG+GGG 0.661013 3_1:+56246415 None:intergenic
ATCAGACCATCAGTATGGTG+AGG 0.661084 3_1:-56246057 Msa0363640:five_prime_UTR
AGGAAGAATGATGATTCGGG+TGG 0.661290 3_1:-56247520 Msa0363640:five_prime_UTR
GGCTGGAGAGTCAAGTTATG+GGG 0.661634 3_1:-56246090 Msa0363640:five_prime_UTR
ATGATGGTGTTGGAGTTCAG+GGG 0.663831 3_1:-56247246 Msa0363640:five_prime_UTR
TTTATGATGAGAAAGCTAGT+GGG 0.669485 3_1:-56246907 Msa0363640:five_prime_UTR
GAACCACCTCTCTATCATCA+CGG 0.674265 3_1:+56245856 None:intergenic
GTTGCAATATTACTACCACC+AGG 0.675761 3_1:+56246650 None:intergenic
GCACCGTGATGATAGAGAGG+TGG 0.675962 3_1:-56245859 Msa0363640:five_prime_UTR
TGGAGAGTCAAGTTATGGGG+AGG 0.676940 3_1:-56246087 Msa0363640:five_prime_UTR
TGGGTGGCAGAATAATATGA+GGG 0.682915 3_1:-56246018 Msa0363640:five_prime_UTR
TGGCCGGATCCAAATATGGG+CGG 0.683016 3_1:-56246143 Msa0363640:five_prime_UTR
GGATGCCTGTGAATGGAATG+GGG 0.684718 3_1:-56246208 Msa0363640:five_prime_UTR
CAGGTGAACCAAACTGCCGG+TGG 0.686986 3_1:-56246719 Msa0363640:five_prime_UTR
CAAGGGAAAGTATTACTCAG+AGG 0.692157 3_1:+56245569 None:intergenic
GGTAGTAATATTGCAACTGG+TGG 0.698783 3_1:-56246644 Msa0363640:five_prime_UTR
ACTGGTGGTAATTATCAAGG+TGG 0.699411 3_1:-56246629 Msa0363640:five_prime_UTR
GATGTGGGAGCTAAGCCTGG+TGG 0.699785 3_1:-56246665 Msa0363640:five_prime_UTR
TGATCCTCAAAGCAACCCAG+TGG 0.709808 3_1:+56243687 None:intergenic
ATGGTCCTAATATGGGAATG+TGG 0.718453 3_1:-56246163 Msa0363640:five_prime_UTR
ATGCTGATTATGGAAAGAGG+AGG 0.719817 3_1:-56245599 Msa0363640:five_prime_UTR
CAGCAACAGCAACAACATGG+TGG 0.735849 3_1:-56247196 Msa0363640:five_prime_UTR
AATCCGATGAGAAATAGGGG+TGG 0.741100 3_1:-56246503 Msa0363640:five_prime_UTR
AGTGAAATTGAGGAACAGAG+AGG 0.744021 3_1:-56247274 Msa0363640:five_prime_UTR
TGAATCCTGATAGAGCTGGG+TGG 0.774886 3_1:-56246034 Msa0363640:five_prime_UTR
TTGGTGAGACAAGTTCCAAG+TGG 0.780474 3_1:-56247154 Msa0363640:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAAATCATATTTTAG+CGG + chr3_1:56246121-56246140 None:intergenic 10.0%
!!! AAAAACGATTTTTGATTTTA+GGG + chr3_1:56243408-56243427 None:intergenic 15.0%
!!! AAAAAACGATTTTTGATTTT+AGG + chr3_1:56243409-56243428 None:intergenic 15.0%
!!! AATCAAAAATCGTTTTTTTT+AGG - chr3_1:56243411-56243430 Msa0363640:three_prime_UTR 15.0%
!!! ATCAAAAATCGTTTTTTTTA+GGG - chr3_1:56243412-56243431 Msa0363640:three_prime_UTR 15.0%
!! AACAATAATAATAACAATAG+AGG - chr3_1:56244543-56244562 Msa0363640:intron 15.0%
!!! AATATAATTTTACCGTAAAT+AGG + chr3_1:56246752-56246771 None:intergenic 15.0%
!! ATCTTAAAAAAACAAAATCT+GGG + chr3_1:56247135-56247154 None:intergenic 15.0%
!! AATCTTAAAAAAACAAAATC+TGG + chr3_1:56247136-56247155 None:intergenic 15.0%
!!! TCAAAAATCGTTTTTTTTAG+GGG - chr3_1:56243413-56243432 Msa0363640:three_prime_UTR 20.0%
!! AATAATAACAATAGAGGTTA+TGG - chr3_1:56244549-56244568 Msa0363640:intron 20.0%
!! TCCTATTTATAAGAGAAATT+TGG - chr3_1:56245843-56245862 Msa0363640:five_prime_UTR 20.0%
!! CCTATTTATAAGAGAAATTT+GGG - chr3_1:56245844-56245863 Msa0363640:five_prime_UTR 20.0%
!! TCAACAAAAAGTAATGTATT+TGG + chr3_1:56245906-56245925 None:intergenic 20.0%
!! TGTTAATTAAGCAAACTAAA+GGG - chr3_1:56246458-56246477 Msa0363640:five_prime_UTR 20.0%
!! TACGGTAAAATTATATTACA+TGG - chr3_1:56246755-56246774 Msa0363640:five_prime_UTR 20.0%
!! TTTGTAATTCCTTGTATTAA+TGG - chr3_1:56246888-56246907 Msa0363640:five_prime_UTR 20.0%
!!! TGTTAAGGTATCTTTTTTTT+TGG - chr3_1:56246933-56246952 Msa0363640:five_prime_UTR 20.0%
!!! ATGAAATCATATGTTTTTCT+GGG - chr3_1:56247167-56247186 Msa0363640:five_prime_UTR 20.0%
!! TTTAATACATATAAAAGAGG+GGG + chr3_1:56247317-56247336 None:intergenic 20.0%
!! GTTTAATACATATAAAAGAG+GGG + chr3_1:56247318-56247337 None:intergenic 20.0%
!! GGTTTAATACATATAAAAGA+GGG + chr3_1:56247319-56247338 None:intergenic 20.0%
!! AGGTTTAATACATATAAAAG+AGG + chr3_1:56247320-56247339 None:intergenic 20.0%
!! TACATCATAATACACAAAAT+TGG + chr3_1:56247805-56247824 None:intergenic 20.0%
! ATAGCAATAACATTATTTCC+AGG + chr3_1:56244051-56244070 None:intergenic 25.0%
! GGAAATAATGTTATTGCTAT+TGG - chr3_1:56244051-56244070 Msa0363640:intron 25.0%
!! AATAATGTTATTGCTATTGG+TGG - chr3_1:56244054-56244073 Msa0363640:intron 25.0%
!! CCTTTTACTGTTAAGAAAAT+GGG - chr3_1:56244363-56244382 Msa0363640:intron 25.0%
! AAAATAGTTGCTGAAAAATC+AGG - chr3_1:56245593-56245612 Msa0363640:five_prime_UTR 25.0%
! ATTTCTCTTATAAATAGGAC+CGG + chr3_1:56245842-56245861 None:intergenic 25.0%
! CCCAAATTTCTCTTATAAAT+AGG + chr3_1:56245847-56245866 None:intergenic 25.0%
! AGATTAAAGAAAAGCAAACA+AGG + chr3_1:56246074-56246093 None:intergenic 25.0%
! GTGTTAATTAAGCAAACTAA+AGG - chr3_1:56246457-56246476 Msa0363640:five_prime_UTR 25.0%
! AAATAGGACTTATCTAACAT+CGG + chr3_1:56246736-56246755 None:intergenic 25.0%
! TGTTAGATAAGTCCTATTTA+CGG - chr3_1:56246737-56246756 Msa0363640:five_prime_UTR 25.0%
! TACACATCCAAAATAAATCA+AGG - chr3_1:56247076-56247095 Msa0363640:five_prime_UTR 25.0%
! AAAAAAACAAAATCTGGGAA+TGG + chr3_1:56247130-56247149 None:intergenic 25.0%
!! CATGAAATCATATGTTTTTC+TGG - chr3_1:56247166-56247185 Msa0363640:five_prime_UTR 25.0%
!! TGAAATCATATGTTTTTCTG+GGG - chr3_1:56247168-56247187 Msa0363640:five_prime_UTR 25.0%
! ATTAGACAATTTGTATTGTG+AGG + chr3_1:56247265-56247284 None:intergenic 25.0%
! TTAATACATATAAAAGAGGG+GGG + chr3_1:56247316-56247335 None:intergenic 25.0%
! AATTGTTTGAATGATGTACT+AGG - chr3_1:56247656-56247675 Msa0363640:five_prime_UTR 25.0%
!!! ATTATGTGCCGTTTTTTTAT+TGG - chr3_1:56247697-56247716 Msa0363640:five_prime_UTR 25.0%
! AACAAGAGCCAATAAAAAAA+CGG + chr3_1:56247708-56247727 None:intergenic 25.0%
TTCACTCATCTAATCTTCTT+TGG + chr3_1:56243230-56243249 None:intergenic 30.0%
!!! CGATTTTTGATTTTAGGGTT+TGG + chr3_1:56243403-56243422 None:intergenic 30.0%
CAACATTAACATCGTTGTAA+AGG + chr3_1:56243567-56243586 None:intergenic 30.0%
CTTTACAACGATGTTAATGT+TGG - chr3_1:56243565-56243584 Msa0363640:exon 30.0%
!! AGGAAGTACTTTGTTATTTG+TGG - chr3_1:56244122-56244141 Msa0363640:intron 30.0%
!! GGAAGTACTTTGTTATTTGT+GGG - chr3_1:56244123-56244142 Msa0363640:intron 30.0%
! TTTTATGATGAGAAAGCTAG+TGG - chr3_1:56244222-56244241 Msa0363640:intron 30.0%
TTTATGATGAGAAAGCTAGT+GGG - chr3_1:56244223-56244242 Msa0363640:intron 30.0%
ATGAATGGTCATTCGTTTAA+TGG - chr3_1:56244312-56244331 Msa0363640:intron 30.0%
TGAATGGTCATTCGTTTAAT+GGG - chr3_1:56244313-56244332 Msa0363640:intron 30.0%
! GCCTTTTACTGTTAAGAAAA+TGG - chr3_1:56244362-56244381 Msa0363640:intron 30.0%
! CCCATTTTCTTAACAGTAAA+AGG + chr3_1:56244366-56244385 None:intergenic 30.0%
TCAGAATAATAGGAATCAAC+AGG - chr3_1:56244392-56244411 Msa0363640:intron 30.0%
!! ATAATTGGTAATGGTGGAAA+TGG - chr3_1:56244669-56244688 Msa0363640:intron 30.0%
AATATGAGGGAAAAAGATAG+AGG - chr3_1:56245125-56245144 Msa0363640:intron 30.0%
CAGTAAATCAAGATTATCAC+AGG - chr3_1:56245481-56245500 Msa0363640:CDS 30.0%
TGAAAAATCAGGATTTGTCA+TGG - chr3_1:56245604-56245623 Msa0363640:five_prime_UTR 30.0%
TTGAAACTAACCATTTCCAT+AGG + chr3_1:56245734-56245753 None:intergenic 30.0%
AAATATAAGCATGCAGAGAA+TGG + chr3_1:56245761-56245780 None:intergenic 30.0%
ATTCTCTGCATGCTTATATT+TGG - chr3_1:56245760-56245779 Msa0363640:five_prime_UTR 30.0%
CTCAAGTTTCTCTTATAAAG+AGG - chr3_1:56245926-56245945 Msa0363640:five_prime_UTR 30.0%
TATTTAAATCATACTCCCTC+CGG + chr3_1:56245953-56245972 None:intergenic 30.0%
CTTGTCAATATCTTCTTCTA+GGG - chr3_1:56245994-56246013 Msa0363640:five_prime_UTR 30.0%
! CAGCTTGTTCAAAAAAAAGT+AGG + chr3_1:56246388-56246407 None:intergenic 30.0%
ACTAAAGGGATCTATAATCT+TGG - chr3_1:56246472-56246491 Msa0363640:five_prime_UTR 30.0%
CTAAAGGGATCTATAATCTT+GGG - chr3_1:56246473-56246492 Msa0363640:five_prime_UTR 30.0%
TAGTTTATACATGTCAATGC+TGG - chr3_1:56246525-56246544 Msa0363640:five_prime_UTR 30.0%
ATAATCCCACATTCATATTG+CGG - chr3_1:56246653-56246672 Msa0363640:five_prime_UTR 30.0%
AAATTCCGCAATATGAATGT+GGG + chr3_1:56246661-56246680 None:intergenic 30.0%
AAAATTCCGCAATATGAATG+TGG + chr3_1:56246662-56246681 None:intergenic 30.0%
! ACATTCATATTGCGGAATTT+TGG - chr3_1:56246661-56246680 Msa0363640:five_prime_UTR 30.0%
AAGTCCATGCTAAAATATGT+TGG - chr3_1:56246812-56246831 Msa0363640:five_prime_UTR 30.0%
!!! CTATCCAACATATTTTAGCA+TGG + chr3_1:56246819-56246838 None:intergenic 30.0%
TGCTAAAATATGTTGGATAG+AGG - chr3_1:56246819-56246838 Msa0363640:five_prime_UTR 30.0%
TAGATATAAACACAGAACAC+AGG + chr3_1:56246858-56246877 None:intergenic 30.0%
AAAAGATACCTTAACAGCTT+AGG + chr3_1:56246929-56246948 None:intergenic 30.0%
!!! GGTATCTTTTTTTTTGGTAG+TGG - chr3_1:56246939-56246958 Msa0363640:five_prime_UTR 30.0%
!! GACAAGGTATCTTTAAAACA+TGG - chr3_1:56247007-56247026 Msa0363640:five_prime_UTR 30.0%
TCCAAAATAAATCAAGGTAC+TGG - chr3_1:56247082-56247101 Msa0363640:five_prime_UTR 30.0%
! TCCAGTACCTTGATTTATTT+TGG + chr3_1:56247086-56247105 None:intergenic 30.0%
! CTTGTGGTGTTTATGTATTT+TGG - chr3_1:56247233-56247252 Msa0363640:five_prime_UTR 30.0%
CATTAAAAAGAAGCAATAGC+AGG + chr3_1:56247340-56247359 None:intergenic 30.0%
AATAATAGGTGCAGTTTAGA+TGG + chr3_1:56247363-56247382 None:intergenic 30.0%
TACAAGTCCATAGCAATAAT+AGG + chr3_1:56247377-56247396 None:intergenic 30.0%
TATGGACTTGTATGTTATGT+AGG - chr3_1:56247385-56247404 Msa0363640:five_prime_UTR 30.0%
ATGGACTTGTATGTTATGTA+GGG - chr3_1:56247386-56247405 Msa0363640:five_prime_UTR 30.0%
CAACTCTCAATGTAAGAAAA+AGG + chr3_1:56247505-56247524 None:intergenic 30.0%
! CTTTTTCTTACATTGAGAGT+TGG - chr3_1:56247503-56247522 Msa0363640:five_prime_UTR 30.0%
AACCAATGTTGTTGATGTAA+TGG - chr3_1:56247588-56247607 Msa0363640:five_prime_UTR 30.0%
ACCAATGTTGTTGATGTAAT+GGG - chr3_1:56247589-56247608 Msa0363640:five_prime_UTR 30.0%
CAAAACAAAAAATGGATGGT+GGG + chr3_1:56247747-56247766 None:intergenic 30.0%
ACAAAACAAAAAATGGATGG+TGG + chr3_1:56247748-56247767 None:intergenic 30.0%
GTTAGGGACAAAACAAAAAA+TGG + chr3_1:56247755-56247774 None:intergenic 30.0%
GGTATACTAACTAACTGTTA+GGG + chr3_1:56247771-56247790 None:intergenic 30.0%
CTAACAGTTAGTTAGTATAC+CGG - chr3_1:56247770-56247789 Msa0363640:five_prime_UTR 30.0%
GGGGAAAAAAACCCTAATAA+TGG - chr3_1:56243432-56243451 Msa0363640:three_prime_UTR 35.0%
ACCAGCTTCATCCATTATTA+GGG + chr3_1:56243446-56243465 None:intergenic 35.0%
! AACGATGTTAATGTTGGTGA+AGG - chr3_1:56243571-56243590 Msa0363640:exon 35.0%
! AAGGTTTTCTTCAATCGTTG+AGG - chr3_1:56243590-56243609 Msa0363640:CDS 35.0%
GTTGAGGAAGAATGATGATT+CGG - chr3_1:56243606-56243625 Msa0363640:CDS 35.0%
TTGAGGAAGAATGATGATTC+GGG - chr3_1:56243607-56243626 Msa0363640:CDS 35.0%
TGATGAGAAGAAGGTTCAAT+CGG - chr3_1:56243648-56243667 Msa0363640:CDS 35.0%
TTTCTGGGTTTCAGAATCAA+GGG - chr3_1:56243749-56243768 Msa0363640:intron 35.0%
TTTCAGAATCAAGGGTTTAG+AGG - chr3_1:56243757-56243776 Msa0363640:intron 35.0%
TTGAATTAGGTCAAGCATCT+GGG - chr3_1:56243827-56243846 Msa0363640:intron 35.0%
TGGAGGGGTTAATCTTAATA+GGG - chr3_1:56244011-56244030 Msa0363640:intron 35.0%
GTTAATCTTAATAGGGTTGG+AGG - chr3_1:56244018-56244037 Msa0363640:intron 35.0%
! AATGTTATTGCTATTGGTGG+TGG - chr3_1:56244057-56244076 Msa0363640:intron 35.0%
! TATTTGTGGGTGATTTGCAT+TGG - chr3_1:56244136-56244155 Msa0363640:intron 35.0%
!!! TTGTCAGGTTGAGTTTTATG+AGG - chr3_1:56244260-56244279 Msa0363640:intron 35.0%
GTAATTATCAAGGTGGAGAT+GGG - chr3_1:56244508-56244527 Msa0363640:intron 35.0%
AACAATAGAGGTTATGGAAG+AGG - chr3_1:56244555-56244574 Msa0363640:intron 35.0%
AGGTTATGGAAGAGGTAATT+GGG - chr3_1:56244563-56244582 Msa0363640:intron 35.0%
TGTCAATCCGATGAGAAATA+GGG - chr3_1:56244623-56244642 Msa0363640:intron 35.0%
! ATAGGTGGTAGAGGTATAAT+TGG - chr3_1:56244654-56244673 Msa0363640:intron 35.0%
! GGTAGAGGTATAATTGGTAA+TGG - chr3_1:56244660-56244679 Msa0363640:intron 35.0%
!! AGAGGTATAATTGGTAATGG+TGG - chr3_1:56244663-56244682 Msa0363640:intron 35.0%
TCCTCAGCAAATTATGAATC+AGG - chr3_1:56244731-56244750 Msa0363640:intron 35.0%
CCTCAGCAAATTATGAATCA+GGG - chr3_1:56244732-56244751 Msa0363640:intron 35.0%
AAAAAGGCAGGATTAACATG+AGG + chr3_1:56244894-56244913 None:intergenic 35.0%
!!! CATGTTAATCCTGCCTTTTT+TGG - chr3_1:56244894-56244913 Msa0363640:intron 35.0%
AAAAAGATAGAGGATCCGAA+AGG - chr3_1:56245135-56245154 Msa0363640:intron 35.0%
AAAAGATAGAGGATCCGAAA+GGG - chr3_1:56245136-56245155 Msa0363640:intron 35.0%
ACAGATATGCTGATCATCAT+AGG - chr3_1:56245396-56245415 Msa0363640:intron 35.0%
ATCAAGATTATCACAGGATG+AGG - chr3_1:56245487-56245506 Msa0363640:CDS 35.0%
! AGGTCAAAAGATGCTGATTA+TGG - chr3_1:56245521-56245540 Msa0363640:exon 35.0%
! AAGATGCTGATTATGGAAAG+AGG - chr3_1:56245528-56245547 Msa0363640:exon 35.0%
TAATACTTTCCCTTGAGGAA+GGG - chr3_1:56245569-56245588 Msa0363640:five_prime_UTR 35.0%
!! ACTATTTTTCCCTTCCTCAA+GGG + chr3_1:56245581-56245600 None:intergenic 35.0%
!! AACTATTTTTCCCTTCCTCA+AGG + chr3_1:56245582-56245601 None:intergenic 35.0%
AGGATTTGTCATGGTTGTTT+GGG - chr3_1:56245613-56245632 Msa0363640:five_prime_UTR 35.0%
! TTTTTGCTCTCCTATGGAAA+TGG - chr3_1:56245721-56245740 Msa0363640:five_prime_UTR 35.0%
GAGTAATAAGTATAGCAGAC+AGG + chr3_1:56245816-56245835 None:intergenic 35.0%
GTTTCTCTTATAAAGAGGAC+CGG - chr3_1:56245931-56245950 Msa0363640:five_prime_UTR 35.0%
GCTTGTCAATATCTTCTTCT+AGG - chr3_1:56245993-56246012 Msa0363640:five_prime_UTR 35.0%
TTGCAAGTATAACTGCATTG+TGG - chr3_1:56246036-56246055 Msa0363640:five_prime_UTR 35.0%
! TTTTAGCGGTTGAATAAGCA+AGG + chr3_1:56246107-56246126 None:intergenic 35.0%
! AGTTTTGCTTTCACTCTTTG+TGG - chr3_1:56246172-56246191 Msa0363640:five_prime_UTR 35.0%
ATTACACCAGTATCACATAC+TGG + chr3_1:56246217-56246236 None:intergenic 35.0%
! TTTCCTTTGCTATGATACCA+TGG - chr3_1:56246248-56246267 Msa0363640:five_prime_UTR 35.0%
TGTTCCTACTTTGTAGTTGA+GGG + chr3_1:56246415-56246434 None:intergenic 35.0%
ATGTTCCTACTTTGTAGTTG+AGG + chr3_1:56246416-56246435 None:intergenic 35.0%
! ACAGCTTAGGTATTTTCCAA+GGG + chr3_1:56246916-56246935 None:intergenic 35.0%
! AACAGCTTAGGTATTTTCCA+AGG + chr3_1:56246917-56246936 None:intergenic 35.0%
GGAAAATACCTAAGCTGTTA+AGG - chr3_1:56246918-56246937 Msa0363640:five_prime_UTR 35.0%
!!! TCTTTTTTTTTGGTAGTGGC+CGG - chr3_1:56246943-56246962 Msa0363640:five_prime_UTR 35.0%
GAGAATGAAATGCTTGGTTA+GGG - chr3_1:56247104-56247123 Msa0363640:five_prime_UTR 35.0%
ACCTATGGACAACTATAACT+CGG + chr3_1:56247205-56247224 None:intergenic 35.0%
AACTGCACCTATTATTGCTA+TGG - chr3_1:56247367-56247386 Msa0363640:five_prime_UTR 35.0%
ATACTGTTCATCTAAACCAC+TGG - chr3_1:56247427-56247446 Msa0363640:five_prime_UTR 35.0%
TACTGTTCATCTAAACCACT+GGG - chr3_1:56247428-56247447 Msa0363640:five_prime_UTR 35.0%
! ACTTGGCTCTTCAATATTGA+TGG + chr3_1:56247473-56247492 None:intergenic 35.0%
GAAAAAGGATTGTCATGACT+TGG + chr3_1:56247490-56247509 None:intergenic 35.0%
!!! GATGTACTAGGTTTTAGTTG+AGG - chr3_1:56247668-56247687 Msa0363640:five_prime_UTR 35.0%
GGGACAAAACAAAAAATGGA+TGG + chr3_1:56247751-56247770 None:intergenic 35.0%
CGGTATACTAACTAACTGTT+AGG + chr3_1:56247772-56247791 None:intergenic 35.0%
CCAGCTTTACAGTAATTGAA+TGG + chr3_1:56247837-56247856 None:intergenic 35.0%
CCATTCAATTACTGTAAAGC+TGG - chr3_1:56247834-56247853 Msa0363640:five_prime_UTR 35.0%
TGAACAACTTCTCACACGTT+AGG - chr3_1:56243246-56243265 Msa0363640:three_prime_UTR 40.0%
GAACAACTTCTCACACGTTA+GGG - chr3_1:56243247-56243266 Msa0363640:three_prime_UTR 40.0%
TCAAAACAGCGTCGTTGAAA+GGG + chr3_1:56243359-56243378 None:intergenic 40.0%
ATCAAAACAGCGTCGTTGAA+AGG + chr3_1:56243360-56243379 None:intergenic 40.0%
!! ACCCTAATAATGGATGAAGC+TGG - chr3_1:56243442-56243461 Msa0363640:three_prime_UTR 40.0%
CACCAGCTTCATCCATTATT+AGG + chr3_1:56243447-56243466 None:intergenic 40.0%
CAGCAGATATAGCTTCGTTA+CGG + chr3_1:56243498-56243517 None:intergenic 40.0%
ATATCTGCTGTAGCTGATGA+TGG - chr3_1:56243508-56243527 Msa0363640:three_prime_UTR 40.0%
ATTCGGGTGGTAGAATTGAT+GGG - chr3_1:56243623-56243642 Msa0363640:CDS 40.0%
GATGAGAAGAAGGTTCAATC+GGG - chr3_1:56243649-56243668 Msa0363640:CDS 40.0%
! GTGATGAATCTAGGGTTTCT+GGG - chr3_1:56243734-56243753 Msa0363640:intron 40.0%
! GTTTCTGGGTTTCAGAATCA+AGG - chr3_1:56243748-56243767 Msa0363640:intron 40.0%
AGAATCAAGGGTTTAGAGGA+GGG - chr3_1:56243761-56243780 Msa0363640:intron 40.0%
GGTGGAATTAGGGTTGAATT+AGG - chr3_1:56243814-56243833 Msa0363640:intron 40.0%
GTTGAATTAGGTCAAGCATC+TGG - chr3_1:56243826-56243845 Msa0363640:intron 40.0%
TGGGAAATCGAGTGAAATTG+AGG - chr3_1:56243846-56243865 Msa0363640:intron 40.0%
AGTGAAATTGAGGAACAGAG+AGG - chr3_1:56243856-56243875 Msa0363640:intron 40.0%
! AATGATGGTGTTGGAGTTCA+GGG - chr3_1:56243883-56243902 Msa0363640:intron 40.0%
GTGGAGGGGTTAATCTTAAT+AGG - chr3_1:56244010-56244029 Msa0363640:intron 40.0%
GGGGTTAATCTTAATAGGGT+TGG - chr3_1:56244015-56244034 Msa0363640:intron 40.0%
CTTAATAGGGTTGGAGGAAA+TGG - chr3_1:56244024-56244043 Msa0363640:intron 40.0%
GAAGCTGAGTTATGCAAGTA+TGG - chr3_1:56244180-56244199 Msa0363640:intron 40.0%
ATGCAAGTATGGACAAGTGA+AGG - chr3_1:56244191-56244210 Msa0363640:intron 40.0%
AAAGCTAGTGGGAAATCCAA+AGG - chr3_1:56244234-56244253 Msa0363640:intron 40.0%
AAGCTAGTGGGAAATCCAAA+GGG - chr3_1:56244235-56244254 Msa0363640:intron 40.0%
!! GAAATCCAAAGGGTATTGTC+AGG - chr3_1:56244245-56244264 Msa0363640:intron 40.0%
ATGGTCATTCGTTTAATGGG+AGG - chr3_1:56244316-56244335 Msa0363640:intron 40.0%
TACTGTTAAGAAAATGGGCG+AGG - chr3_1:56244368-56244387 Msa0363640:intron 40.0%
GTTGCAATATTACTACCACC+AGG + chr3_1:56244483-56244502 None:intergenic 40.0%
GGTGGTAGTAATATTGCAAC+TGG - chr3_1:56244483-56244502 Msa0363640:intron 40.0%
GGTAGTAATATTGCAACTGG+TGG - chr3_1:56244486-56244505 Msa0363640:intron 40.0%
GCAACTGGTGGTAATTATCA+AGG - chr3_1:56244498-56244517 Msa0363640:intron 40.0%
ACTGGTGGTAATTATCAAGG+TGG - chr3_1:56244501-56244520 Msa0363640:intron 40.0%
GGTAATTATCAAGGTGGAGA+TGG - chr3_1:56244507-56244526 Msa0363640:intron 40.0%
GAGGTTATGGAAGAGGTAAT+TGG - chr3_1:56244562-56244581 Msa0363640:intron 40.0%
GGTTATGGAAGAGGTAATTG+GGG - chr3_1:56244564-56244583 Msa0363640:intron 40.0%
! CTATTTCTCATCGGATTGAC+AGG + chr3_1:56244624-56244643 None:intergenic 40.0%
CTGTCAATCCGATGAGAAAT+AGG - chr3_1:56244622-56244641 Msa0363640:intron 40.0%
GTCAATCCGATGAGAAATAG+GGG - chr3_1:56244624-56244643 Msa0363640:intron 40.0%
! GGTAATGGTGGAAATGGATT+TGG - chr3_1:56244675-56244694 Msa0363640:intron 40.0%
! AATGGATTTGGACAGGGTAT+TGG - chr3_1:56244687-56244706 Msa0363640:intron 40.0%
! ATTTGCTGAGGATGCATCAT+CGG + chr3_1:56244723-56244742 None:intergenic 40.0%
!! CCCTGATTCATAATTTGCTG+AGG + chr3_1:56244735-56244754 None:intergenic 40.0%
!!! AATCCTGCCTTTTTTGGAAG+AGG - chr3_1:56244900-56244919 Msa0363640:intron 40.0%
!!! ATCCTGCCTTTTTTGGAAGA+GGG - chr3_1:56244901-56244920 Msa0363640:intron 40.0%
GGTATGGATGGTCCTAATAT+GGG - chr3_1:56244960-56244979 Msa0363640:intron 40.0%
ATGGTCCTAATATGGGAATG+TGG - chr3_1:56244967-56244986 Msa0363640:intron 40.0%
TGGGTGGCAGAATAATATGA+GGG - chr3_1:56245112-56245131 Msa0363640:intron 40.0%
TACAGGGATGATAGAGATCA+AGG - chr3_1:56245185-56245204 Msa0363640:intron 40.0%
ACAGGGATGATAGAGATCAA+GGG - chr3_1:56245186-56245205 Msa0363640:intron 40.0%
! CAGCATCTTTTGACCTAGAA+TGG + chr3_1:56245517-56245536 None:intergenic 40.0%
! ATGCTGATTATGGAAAGAGG+AGG - chr3_1:56245531-56245550 Msa0363640:five_prime_UTR 40.0%
!! CAAGGGAAAGTATTACTCAG+AGG + chr3_1:56245564-56245583 None:intergenic 40.0%
CTGAGTAATACTTTCCCTTG+AGG - chr3_1:56245564-56245583 Msa0363640:five_prime_UTR 40.0%
GTAATACTTTCCCTTGAGGA+AGG - chr3_1:56245568-56245587 Msa0363640:five_prime_UTR 40.0%
CAGGATTTGTCATGGTTGTT+TGG - chr3_1:56245612-56245631 Msa0363640:five_prime_UTR 40.0%
!! TCATGGTTGTTTGGGTTTTC+TGG - chr3_1:56245621-56245640 Msa0363640:five_prime_UTR 40.0%
GCTATACTTATTACTCCCTC+CGG - chr3_1:56245820-56245839 Msa0363640:five_prime_UTR 40.0%
CTCTTATAAATAGGACCGGA+GGG + chr3_1:56245838-56245857 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG + chr3_1:56245839-56245858 None:intergenic 40.0%
GTGATTCCAGTATGTGATAC+TGG - chr3_1:56246208-56246227 Msa0363640:five_prime_UTR 40.0%
CAACCATGGTATCATAGCAA+AGG + chr3_1:56246254-56246273 None:intergenic 40.0%
AGCATGTCTTTGTTAAGACC+AGG - chr3_1:56246317-56246336 Msa0363640:five_prime_UTR 40.0%
! TCAATAGTCTTGCAATCACC+TGG + chr3_1:56246338-56246357 None:intergenic 40.0%
ATTGCCCTCAACTACAAAGT+AGG - chr3_1:56246408-56246427 Msa0363640:five_prime_UTR 40.0%
GAATGTGGTTAAAAGGCGAA+TGG + chr3_1:56246687-56246706 None:intergenic 40.0%
ACCAGCAGAATGTGGTTAAA+AGG + chr3_1:56246694-56246713 None:intergenic 40.0%
AAACTGTTACCAGCAGAATG+TGG + chr3_1:56246702-56246721 None:intergenic 40.0%
!!! CTTTTTTTTTGGTAGTGGCC+GGG - chr3_1:56246944-56246963 Msa0363640:five_prime_UTR 40.0%
!!! TTTTTTTTTGGTAGTGGCCG+GGG - chr3_1:56246945-56246964 Msa0363640:five_prime_UTR 40.0%
GTACTGGAGAATGAAATGCT+TGG - chr3_1:56247098-56247117 Msa0363640:five_prime_UTR 40.0%
GGAGAATGAAATGCTTGGTT+AGG - chr3_1:56247103-56247122 Msa0363640:five_prime_UTR 40.0%
ACCGAGTTATAGTTGTCCAT+AGG - chr3_1:56247201-56247220 Msa0363640:five_prime_UTR 40.0%
GCCCATTACATCAACAACAT+TGG + chr3_1:56247593-56247612 None:intergenic 40.0%
ACAAAATTGGCATGCTCAAC+CGG + chr3_1:56247792-56247811 None:intergenic 40.0%
GAGAAGAAGAGTCAGAGAGA+AGG + chr3_1:56243277-56243296 None:intergenic 45.0%
TTACGGTGGAACTGATCCAT+AGG + chr3_1:56243481-56243500 None:intergenic 45.0%
CAGATATAGCTTCGTTACGG+TGG + chr3_1:56243495-56243514 None:intergenic 45.0%
! AGGAAGAATGATGATTCGGG+TGG - chr3_1:56243610-56243629 Msa0363640:CDS 45.0%
GATTCGGGTGGTAGAATTGA+TGG - chr3_1:56243622-56243641 Msa0363640:CDS 45.0%
TTCGGGTGGTAGAATTGATG+GGG - chr3_1:56243624-56243643 Msa0363640:CDS 45.0%
!! TGATGGGGTTGATGAGAAGA+AGG - chr3_1:56243639-56243658 Msa0363640:CDS 45.0%
AAGAAGGTTCAATCGGGTTC+TGG - chr3_1:56243655-56243674 Msa0363640:CDS 45.0%
!! TTGGTGGTGGTGATGAATCT+AGG - chr3_1:56243725-56243744 Msa0363640:CDS 45.0%
!! TGGTGGTGGTGATGAATCTA+GGG - chr3_1:56243726-56243745 Msa0363640:CDS 45.0%
! GGTGATGAATCTAGGGTTTC+TGG - chr3_1:56243733-56243752 Msa0363640:intron 45.0%
CAGAATCAAGGGTTTAGAGG+AGG - chr3_1:56243760-56243779 Msa0363640:intron 45.0%
!! AGGGAATTCTGGAGTTGGAT+CGG - chr3_1:56243780-56243799 Msa0363640:intron 45.0%
! GAACAGAGAGGTGTGAATGA+TGG - chr3_1:56243868-56243887 Msa0363640:intron 45.0%
! AGAGGTGTGAATGATGGTGT+TGG - chr3_1:56243874-56243893 Msa0363640:intron 45.0%
! GAATGATGGTGTTGGAGTTC+AGG - chr3_1:56243882-56243901 Msa0363640:intron 45.0%
! ATGATGGTGTTGGAGTTCAG+GGG - chr3_1:56243884-56243903 Msa0363640:intron 45.0%
!! CAACAACATGGTGGTGTTGT+TGG - chr3_1:56243943-56243962 Msa0363640:intron 45.0%
!! GTGGTGTTGTTGGAAACGAT+GGG - chr3_1:56243953-56243972 Msa0363640:intron 45.0%
TGTTGTTGGAAACGATGGGT+TGG - chr3_1:56243957-56243976 Msa0363640:intron 45.0%
TTGGTGAGACAAGTTCCAAG+TGG - chr3_1:56243976-56243995 Msa0363640:intron 45.0%
!! CAAGTTCCAAGTGGTGTTGT+TGG - chr3_1:56243985-56244004 Msa0363640:intron 45.0%
!! GTTATTGCTATTGGTGGTGG+AGG - chr3_1:56244060-56244079 Msa0363640:intron 45.0%
! TTGTGGGTGATTTGCATTGG+TGG - chr3_1:56244139-56244158 Msa0363640:intron 45.0%
CAAGTATGGACAAGTGAAGG+AGG - chr3_1:56244194-56244213 Msa0363640:intron 45.0%
CTCAACCTGACAATACCCTT+TGG + chr3_1:56244253-56244272 None:intergenic 45.0%
ATATGCTGCAACTGCCTGTA+AGG - chr3_1:56244284-56244303 Msa0363640:intron 45.0%
ACCATTCATCCCTTCCTTAC+AGG + chr3_1:56244301-56244320 None:intergenic 45.0%
GACGCAAAAGCAACAACACA+CGG + chr3_1:56244342-56244361 None:intergenic 45.0%
GAAGAGGTAATTGGGGTAGA+GGG - chr3_1:56244571-56244590 Msa0363640:intron 45.0%
TAGAGGGAACAATCCTGGTA+TGG - chr3_1:56244587-56244606 Msa0363640:intron 45.0%
AGAGGGAACAATCCTGGTAT+GGG - chr3_1:56244588-56244607 Msa0363640:intron 45.0%
AATCCGATGAGAAATAGGGG+TGG - chr3_1:56244627-56244646 Msa0363640:intron 45.0%
! TGGTGGAAATGGATTTGGAC+AGG - chr3_1:56244680-56244699 Msa0363640:intron 45.0%
! GGTGGAAATGGATTTGGACA+GGG - chr3_1:56244681-56244700 Msa0363640:intron 45.0%
!! CAGGGTTTTGATCCTGCATT+TGG - chr3_1:56244750-56244769 Msa0363640:intron 45.0%
!! GGTTTTGATCCTGCATTTGG+TGG - chr3_1:56244753-56244772 Msa0363640:intron 45.0%
ATGCCTCAATTTCCTGGTGT+TGG - chr3_1:56244843-56244862 Msa0363640:intron 45.0%
!! TTAACATGAGGTGCTACTCC+AGG + chr3_1:56244882-56244901 None:intergenic 45.0%
ATCCCTCTTCCAAAAAAGGC+AGG + chr3_1:56244906-56244925 None:intergenic 45.0%
AGGCATCCCTCTTCCAAAAA+AGG + chr3_1:56244910-56244929 None:intergenic 45.0%
ATCATCCCCATTCCATTCAC+AGG + chr3_1:56244930-56244949 None:intergenic 45.0%
GGGTATGGATGGTCCTAATA+TGG - chr3_1:56244959-56244978 Msa0363640:intron 45.0%
TCCTAATATGGGAATGTGGC+CGG - chr3_1:56244971-56244990 Msa0363640:intron 45.0%
AATGTGGCCGGATCCAAATA+TGG - chr3_1:56244983-56245002 Msa0363640:intron 45.0%
ATGTGGCCGGATCCAAATAT+GGG - chr3_1:56244984-56245003 Msa0363640:intron 45.0%
ATCAGACCATCAGTATGGTG+AGG - chr3_1:56245073-56245092 Msa0363640:intron 45.0%
GATTCACCTCACCATACTGA+TGG + chr3_1:56245082-56245101 None:intergenic 45.0%
AGGTGAATCCTGATAGAGCT+GGG - chr3_1:56245093-56245112 Msa0363640:intron 45.0%
CTGGGTGGCAGAATAATATG+AGG - chr3_1:56245111-56245130 Msa0363640:intron 45.0%
! TTCTTCTGAGCGAAGGTACA+GGG - chr3_1:56245169-56245188 Msa0363640:intron 45.0%
GCACCTAGAGAAAAAGATGC+CGG - chr3_1:56245221-56245240 Msa0363640:intron 45.0%
! TGTCCGGCATCTTTTTCTCT+AGG + chr3_1:56245227-56245246 None:intergenic 45.0%
! TGCTTTCTTTCTGGCCATTC+AGG + chr3_1:56245254-56245273 None:intergenic 45.0%
TCATCACGGTGCTTTCTTTC+TGG + chr3_1:56245263-56245282 None:intergenic 45.0%
!! AAAGCACCGTGATGATAGAG+AGG - chr3_1:56245268-56245287 Msa0363640:intron 45.0%
GAACCACCTCTCTATCATCA+CGG + chr3_1:56245277-56245296 None:intergenic 45.0%
GGACAGATACAGGGAAGATA+GGG - chr3_1:56245373-56245392 Msa0363640:intron 45.0%
AGGATGAGGAACACCATTCT+AGG - chr3_1:56245501-56245520 Msa0363640:CDS 45.0%
CTGATTATGGAAAGAGGAGG+CGG - chr3_1:56245534-56245553 Msa0363640:five_prime_UTR 45.0%
!! TGGTTGTTTGGGTTTTCTGG+TGG - chr3_1:56245624-56245643 Msa0363640:five_prime_UTR 45.0%
CTGCTCAACAACTTCTAGGT+CGG + chr3_1:56245657-56245676 None:intergenic 45.0%
TGTTCCAGTTGCATCTTGTC+AGG - chr3_1:56245694-56245713 Msa0363640:five_prime_UTR 45.0%
!! GGAGTGTTTTTGCTCTCCTA+TGG - chr3_1:56245715-56245734 Msa0363640:five_prime_UTR 45.0%
TCTCTTATAAAGAGGACCGG+AGG - chr3_1:56245934-56245953 Msa0363640:five_prime_UTR 45.0%
CTCTTATAAAGAGGACCGGA+GGG - chr3_1:56245935-56245954 Msa0363640:five_prime_UTR 45.0%
AGCGGTTGAATAAGCAAGGA+GGG + chr3_1:56246103-56246122 None:intergenic 45.0%
TAGCGGTTGAATAAGCAAGG+AGG + chr3_1:56246104-56246123 None:intergenic 45.0%
ACATGCACTCAAGTCAACCA+TGG + chr3_1:56246268-56246287 None:intergenic 45.0%
GGCACATTGTTGCTAAACAG+TGG - chr3_1:56246546-56246565 Msa0363640:five_prime_UTR 45.0%
GCTTCACAAATTGCCTATGG+CGG + chr3_1:56246605-56246624 None:intergenic 45.0%
GGTGCTTCACAAATTGCCTA+TGG + chr3_1:56246608-56246627 None:intergenic 45.0%
! TTGTGAAGCACCACTAGTCA+TGG - chr3_1:56246616-56246635 Msa0363640:five_prime_UTR 45.0%
GAATGTGGGATTATGACCTG+TGG + chr3_1:56246647-56246666 None:intergenic 45.0%
! GCCTTTTAACCACATTCTGC+TGG - chr3_1:56246690-56246709 Msa0363640:five_prime_UTR 45.0%
CCAAGGGAGCCATTAATACA+AGG + chr3_1:56246900-56246919 None:intergenic 45.0%
CCTTGTATTAATGGCTCCCT+TGG - chr3_1:56246897-56246916 Msa0363640:five_prime_UTR 45.0%
CCACAAGCAAACTACACCTA+TGG + chr3_1:56247220-56247239 None:intergenic 45.0%
!! CCATAGGTGTAGTTTGCTTG+TGG - chr3_1:56247217-56247236 Msa0363640:five_prime_UTR 45.0%
! TAAACCACTGGGTTGCTTTG+AGG - chr3_1:56247439-56247458 Msa0363640:five_prime_UTR 45.0%
ATGGATGAAGCTGGTGAGAG+TGG - chr3_1:56243451-56243470 Msa0363640:three_prime_UTR 50.0%
TGGTGAGAGTGGAGATCCTA+TGG - chr3_1:56243462-56243481 Msa0363640:three_prime_UTR 50.0%
! TCAATCGGGTTCTGGTGTTC+AGG - chr3_1:56243663-56243682 Msa0363640:CDS 50.0%
GGGTTTAGAGGAGGGAATTC+TGG - chr3_1:56243769-56243788 Msa0363640:intron 50.0%
!! AGAGGAGGGAATTCTGGAGT+TGG - chr3_1:56243775-56243794 Msa0363640:intron 50.0%
!! GGGAATTCTGGAGTTGGATC+GGG - chr3_1:56243781-56243800 Msa0363640:intron 50.0%
!! TACCGGTGGTGGTGGAATTA+GGG - chr3_1:56243804-56243823 Msa0363640:intron 50.0%
AACCCTAATTCCACCACCAC+CGG + chr3_1:56243809-56243828 None:intergenic 50.0%
CAGCAGCAACAGCAACAACA+TGG - chr3_1:56243931-56243950 Msa0363640:intron 50.0%
CAGCAACAGCAACAACATGG+TGG - chr3_1:56243934-56243953 Msa0363640:intron 50.0%
!! GGTGGTGTTGTTGGAAACGA+TGG - chr3_1:56243952-56243971 Msa0363640:intron 50.0%
!! GTTCCAAGTGGTGTTGTTGG+TGG - chr3_1:56243988-56244007 Msa0363640:intron 50.0%
!! ATTGCTATTGGTGGTGGAGG+AGG - chr3_1:56244063-56244082 Msa0363640:intron 50.0%
ATGGACAAGTGAAGGAGGTG+AGG - chr3_1:56244199-56244218 Msa0363640:intron 50.0%
CTGCAACTGCCTGTAAGGAA+GGG - chr3_1:56244289-56244308 Msa0363640:intron 50.0%
GCCTGTAAGGAAGGGATGAA+TGG - chr3_1:56244297-56244316 Msa0363640:intron 50.0%
TGGGCGAGGCTCAGAATAAT+AGG - chr3_1:56244382-56244401 Msa0363640:intron 50.0%
CAACAGGTGAACCAAACTGC+CGG - chr3_1:56244408-56244427 Msa0363640:intron 50.0%
GGAAGAGGTAATTGGGGTAG+AGG - chr3_1:56244570-56244589 Msa0363640:intron 50.0%
AATCCTGGTATGGGTGGTAG+AGG - chr3_1:56244597-56244616 Msa0363640:intron 50.0%
! CCACCACCCCTATTTCTCAT+CGG + chr3_1:56244633-56244652 None:intergenic 50.0%
CGATGAGAAATAGGGGTGGT+GGG - chr3_1:56244631-56244650 Msa0363640:intron 50.0%
!! AGAAATAGGGGTGGTGGGAT+AGG - chr3_1:56244636-56244655 Msa0363640:intron 50.0%
AAGCCTGCCATTCTACCCAT+GGG + chr3_1:56244780-56244799 None:intergenic 50.0%
AAAGCCTGCCATTCTACCCA+TGG + chr3_1:56244781-56244800 None:intergenic 50.0%
ATGGGTAGAATGGCAGGCTT+TGG - chr3_1:56244780-56244799 Msa0363640:intron 50.0%
GGGATGATGCCTCAATTTCC+TGG - chr3_1:56244837-56244856 Msa0363640:intron 50.0%
CCTCCAACACCAGGAAATTG+AGG + chr3_1:56244849-56244868 None:intergenic 50.0%
! CCTCAATTTCCTGGTGTTGG+AGG - chr3_1:56244846-56244865 Msa0363640:intron 50.0%
! TTTCCTGGTGTTGGAGGTGT+TGG - chr3_1:56244852-56244871 Msa0363640:intron 50.0%
AAACCAACACCTCCAACACC+AGG + chr3_1:56244858-56244877 None:intergenic 50.0%
AGGGATGCCTGTGAATGGAA+TGG - chr3_1:56244920-56244939 Msa0363640:intron 50.0%
GGGATGCCTGTGAATGGAAT+GGG - chr3_1:56244921-56244940 Msa0363640:intron 50.0%
GGATGCCTGTGAATGGAATG+GGG - chr3_1:56244922-56244941 Msa0363640:intron 50.0%
AATGGGGATGATGCCCCAAT+CGG - chr3_1:56244938-56244957 Msa0363640:intron 50.0%
AGGACCATCCATACCCGATT+GGG + chr3_1:56244955-56244974 None:intergenic 50.0%
TAGGACCATCCATACCCGAT+TGG + chr3_1:56244956-56244975 None:intergenic 50.0%
TCCGGCCACATTCCCATATT+AGG + chr3_1:56244975-56244994 None:intergenic 50.0%
CATCCGCCCATATTTGGATC+CGG + chr3_1:56244993-56245012 None:intergenic 50.0%
GGATCCAAATATGGGCGGAT+GGG - chr3_1:56244992-56245011 Msa0363640:intron 50.0%
GATCCAAATATGGGCGGATG+GGG - chr3_1:56244993-56245012 Msa0363640:intron 50.0%
AGGGCTGGAGAGTCAAGTTA+TGG - chr3_1:56245038-56245057 Msa0363640:intron 50.0%
GGGCTGGAGAGTCAAGTTAT+GGG - chr3_1:56245039-56245058 Msa0363640:intron 50.0%
GGCTGGAGAGTCAAGTTATG+GGG - chr3_1:56245040-56245059 Msa0363640:intron 50.0%
TGGAGAGTCAAGTTATGGGG+AGG - chr3_1:56245043-56245062 Msa0363640:intron 50.0%
GCAGCATCAGACCATCAGTA+TGG - chr3_1:56245068-56245087 Msa0363640:intron 50.0%
GAGGTGAATCCTGATAGAGC+TGG - chr3_1:56245092-56245111 Msa0363640:intron 50.0%
TGAATCCTGATAGAGCTGGG+TGG - chr3_1:56245096-56245115 Msa0363640:intron 50.0%
ATAGAGGATCCGAAAGGGAC+TGG - chr3_1:56245141-56245160 Msa0363640:intron 50.0%
GTACCTTCGCTCAGAAGAAC+CGG + chr3_1:56245168-56245187 None:intergenic 50.0%
! GTTCTTCTGAGCGAAGGTAC+AGG - chr3_1:56245168-56245187 Msa0363640:intron 50.0%
ATGCCGGACATGATCCTGAA+TGG - chr3_1:56245237-56245256 Msa0363640:intron 50.0%
TGGCCATTCAGGATCATGTC+CGG + chr3_1:56245243-56245262 None:intergenic 50.0%
GGGACAGATACAGGGAAGAT+AGG - chr3_1:56245372-56245391 Msa0363640:intron 50.0%
! CCTCATCATGCTCTGGTTCA+CGG + chr3_1:56245430-56245449 None:intergenic 50.0%
AACCAGAGCATGATGAGGAG+TGG - chr3_1:56245432-56245451 Msa0363640:CDS 50.0%
ACCAGAGCATGATGAGGAGT+GGG - chr3_1:56245433-56245452 Msa0363640:CDS 50.0%
CTCAACAACTTCTAGGTCGG+AGG + chr3_1:56245654-56245673 None:intergenic 50.0%
GCAGCTGCTCAACAACTTCT+AGG + chr3_1:56245661-56245680 None:intergenic 50.0%
CACTCCTGACAAGATGCAAC+TGG + chr3_1:56245701-56245720 None:intergenic 50.0%
GTTGCTAAACAGTGGCGTAG+TGG - chr3_1:56246554-56246573 Msa0363640:five_prime_UTR 50.0%
! AGTGGCGTAGTGGAATCATG+TGG - chr3_1:56246564-56246583 Msa0363640:five_prime_UTR 50.0%
! GCGTAGTGGAATCATGTGGT+GGG - chr3_1:56246568-56246587 Msa0363640:five_prime_UTR 50.0%
GGTTTAGTGCTATCCGCCAT+AGG - chr3_1:56246589-56246608 Msa0363640:five_prime_UTR 50.0%
AAGCACCACTAGTCATGGCA+GGG - chr3_1:56246621-56246640 Msa0363640:five_prime_UTR 50.0%
!! TTAGCTCAGTTGGTAGGTCC+GGG + chr3_1:56246978-56246997 None:intergenic 50.0%
!! CTTAGCTCAGTTGGTAGGTC+CGG + chr3_1:56246979-56246998 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + chr3_1:56246984-56247003 None:intergenic 50.0%
CCTTGTGAGCTTAGCTCAGT+TGG + chr3_1:56246988-56247007 None:intergenic 50.0%
CCAACTGAGCTAAGCTCACA+AGG - chr3_1:56246985-56247004 Msa0363640:five_prime_UTR 50.0%
GAGCTAAGCTCACAAGGACA+AGG - chr3_1:56246991-56247010 Msa0363640:five_prime_UTR 50.0%
TGATCCTCAAAGCAACCCAG+TGG + chr3_1:56247446-56247465 None:intergenic 50.0%
! GGGTTCTGGTGTTCAGGATC+CGG - chr3_1:56243669-56243688 Msa0363640:CDS 55.0%
TTCTGGTGTTCAGGATCCGG+TGG - chr3_1:56243672-56243691 Msa0363640:CDS 55.0%
TCACCAACAACACCAGCCAC+CGG + chr3_1:56243691-56243710 None:intergenic 55.0%
!! GTGGCTGGTGTTGTTGGTGA+GGG - chr3_1:56243691-56243710 Msa0363640:CDS 55.0%
! GGTGAGGGAGTGAAGAGTGT+TGG - chr3_1:56243706-56243725 Msa0363640:CDS 55.0%
!! GAGGGAGTGAAGAGTGTTGG+TGG - chr3_1:56243709-56243728 Msa0363640:CDS 55.0%
!! GGAGTGAAGAGTGTTGGTGG+TGG - chr3_1:56243712-56243731 Msa0363640:CDS 55.0%
! TCTGGAGTTGGATCGGGTAC+CGG - chr3_1:56243787-56243806 Msa0363640:intron 55.0%
!! GTACCGGTGGTGGTGGAATT+AGG - chr3_1:56243803-56243822 Msa0363640:intron 55.0%
CCACCACCAACAACACCACT+TGG + chr3_1:56243994-56244013 None:intergenic 55.0%
!! CCAAGTGGTGTTGTTGGTGG+TGG - chr3_1:56243991-56244010 Msa0363640:intron 55.0%
!! AGTGGTGTTGTTGGTGGTGG+AGG - chr3_1:56243994-56244013 Msa0363640:intron 55.0%
!! GTGGTGTTGTTGGTGGTGGA+GGG - chr3_1:56243995-56244014 Msa0363640:intron 55.0%
!! TGGTGTTGTTGGTGGTGGAG+GGG - chr3_1:56243996-56244015 Msa0363640:intron 55.0%
AGGGTTGGAGGAAATGGACC+TGG - chr3_1:56244030-56244049 Msa0363640:intron 55.0%
!! ATTGGTGGTGGAGGAGGTGA+AGG - chr3_1:56244069-56244088 Msa0363640:intron 55.0%
!! TTGGTGGTGGAGGAGGTGAA+GGG - chr3_1:56244070-56244089 Msa0363640:intron 55.0%
! GTGGACTACTGATGCTGAGC+TGG - chr3_1:56244158-56244177 Msa0363640:intron 55.0%
GCTGCAACTGCCTGTAAGGA+AGG - chr3_1:56244288-56244307 Msa0363640:intron 55.0%
TGAACCAAACTGCCGGTGGT+GGG - chr3_1:56244415-56244434 Msa0363640:intron 55.0%
TGGGGTTAACCCGGGAAGAA+GGG - chr3_1:56244434-56244453 Msa0363640:intron 55.0%
TGGGGTAGAGGGAACAATCC+TGG - chr3_1:56244582-56244601 Msa0363640:intron 55.0%
GGGAACAATCCTGGTATGGG+TGG - chr3_1:56244591-56244610 Msa0363640:intron 55.0%
CCGATGAGAAATAGGGGTGG+TGG - chr3_1:56244630-56244649 Msa0363640:intron 55.0%
!! AATAGGGGTGGTGGGATAGG+TGG - chr3_1:56244639-56244658 Msa0363640:intron 55.0%
TGCTGAGGATGCATCATCGG+CGG + chr3_1:56244720-56244739 None:intergenic 55.0%
! TCCTGCATTTGGTGGTCCCA+TGG - chr3_1:56244761-56244780 Msa0363640:intron 55.0%
! CCTGCATTTGGTGGTCCCAT+GGG - chr3_1:56244762-56244781 Msa0363640:intron 55.0%
TGGTGGTCCCATGGGTAGAA+TGG - chr3_1:56244770-56244789 Msa0363640:intron 55.0%
! GGTAGAATGGCAGGCTTTGG+AGG - chr3_1:56244783-56244802 Msa0363640:intron 55.0%
! TGAGGCATCATCCCCGAGAA+TGG + chr3_1:56244831-56244850 None:intergenic 55.0%
!! GTTGGAGGTGTTGGTTTGCC+TGG - chr3_1:56244861-56244880 Msa0363640:intron 55.0%
GGAAGAGGGATGCCTGTGAA+TGG - chr3_1:56244915-56244934 Msa0363640:intron 55.0%
ATGGGGATGATGCCCCAATC+GGG - chr3_1:56244939-56244958 Msa0363640:intron 55.0%
GATGATGCCCCAATCGGGTA+TGG - chr3_1:56244944-56244963 Msa0363640:intron 55.0%
ATGCCCCAATCGGGTATGGA+TGG - chr3_1:56244948-56244967 Msa0363640:intron 55.0%
GGACCATCCATACCCGATTG+GGG + chr3_1:56244954-56244973 None:intergenic 55.0%
TGGCCGGATCCAAATATGGG+CGG - chr3_1:56244987-56245006 Msa0363640:intron 55.0%
CGGATCCAAATATGGGCGGA+TGG - chr3_1:56244991-56245010 Msa0363640:intron 55.0%
TTCTGCCACCCAGCTCTATC+AGG + chr3_1:56245104-56245123 None:intergenic 55.0%
AGAACCGGACCAGTCCCTTT+CGG + chr3_1:56245153-56245172 None:intergenic 55.0%
GCACCGTGATGATAGAGAGG+TGG - chr3_1:56245271-56245290 Msa0363640:intron 55.0%
AACGATCACGTGACCGTGGT+CGG - chr3_1:56245300-56245319 Msa0363640:intron 55.0%
! CTCGAGACTTTTCCCGACCA+CGG + chr3_1:56245316-56245335 None:intergenic 55.0%
TCGAGATCGTGAGCGCGAAA+GGG - chr3_1:56245331-56245350 Msa0363640:intron 55.0%
ATCGTGAGCGGGACAGATAC+AGG - chr3_1:56245363-56245382 Msa0363640:intron 55.0%
TCGTGAGCGGGACAGATACA+GGG - chr3_1:56245364-56245383 Msa0363640:intron 55.0%
CCGTGAACCAGAGCATGATG+AGG - chr3_1:56245427-56245446 Msa0363640:CDS 55.0%
TCCCACTCCTCATCATGCTC+TGG + chr3_1:56245437-56245456 None:intergenic 55.0%
AGCATGATGAGGAGTGGGAG+CGG - chr3_1:56245438-56245457 Msa0363640:CDS 55.0%
! GGCGTAGTGGAATCATGTGG+TGG - chr3_1:56246567-56246586 Msa0363640:five_prime_UTR 55.0%
! GAAGCACCACTAGTCATGGC+AGG - chr3_1:56246620-56246639 Msa0363640:five_prime_UTR 55.0%
!! TAGCTCAGTTGGTAGGTCCG+GGG + chr3_1:56246977-56246996 None:intergenic 55.0%
!! GATCCGGTGGCTGGTGTTGT+TGG - chr3_1:56243685-56243704 Msa0363640:CDS 60.0%
!! GGTGGCTGGTGTTGTTGGTG+AGG - chr3_1:56243690-56243709 Msa0363640:CDS 60.0%
!! TGGTGGTGGAGGAGGTGAAG+GGG - chr3_1:56244071-56244090 Msa0363640:intron 60.0%
CAGGTGAACCAAACTGCCGG+TGG - chr3_1:56244411-56244430 Msa0363640:intron 60.0%
GTGAACCAAACTGCCGGTGG+TGG - chr3_1:56244414-56244433 Msa0363640:intron 60.0%
GAACCAAACTGCCGGTGGTG+GGG - chr3_1:56244416-56244435 Msa0363640:intron 60.0%
TAACCCCACCACCGGCAGTT+TGG + chr3_1:56244422-56244441 None:intergenic 60.0%
GTGGGGTTAACCCGGGAAGA+AGG - chr3_1:56244433-56244452 Msa0363640:intron 60.0%
GGGGTTAACCCGGGAAGAAG+GGG - chr3_1:56244435-56244454 Msa0363640:intron 60.0%
GGGTTAACCCGGGAAGAAGG+GGG - chr3_1:56244436-56244455 Msa0363640:intron 60.0%
AAGAAGGGGGCCTGCTGATG+TGG - chr3_1:56244449-56244468 Msa0363640:intron 60.0%
AGAAGGGGGCCTGCTGATGT+GGG - chr3_1:56244450-56244469 Msa0363640:intron 60.0%
GGCTTAGCTCCCACATCAGC+AGG + chr3_1:56244462-56244481 None:intergenic 60.0%
GCTGATGTGGGAGCTAAGCC+TGG - chr3_1:56244462-56244481 Msa0363640:intron 60.0%
GATGTGGGAGCTAAGCCTGG+TGG - chr3_1:56244465-56244484 Msa0363640:intron 60.0%
GGTCCTCTACCACCCATACC+AGG + chr3_1:56244603-56244622 None:intergenic 60.0%
!! GGTGGTGGGATAGGTGGTAG+AGG - chr3_1:56244645-56244664 Msa0363640:intron 60.0%
CTGAGGATGCATCATCGGCG+GGG + chr3_1:56244718-56244737 None:intergenic 60.0%
GCTGAGGATGCATCATCGGC+GGG + chr3_1:56244719-56244738 None:intergenic 60.0%
CCCATGGGACCACCAAATGC+AGG + chr3_1:56244765-56244784 None:intergenic 60.0%
GGTCCCATGGGTAGAATGGC+AGG - chr3_1:56244774-56244793 Msa0363640:intron 60.0%
!! GCAGGCTTTGGAGGCTATCC+CGG - chr3_1:56244792-56244811 Msa0363640:intron 60.0%
TGGTCCGGCACCTCCATTCT+CGG - chr3_1:56244815-56244834 Msa0363640:intron 60.0%
! ATCCCCGAGAATGGAGGTGC+CGG + chr3_1:56244822-56244841 None:intergenic 60.0%
GGCATCATCCCCGAGAATGG+AGG + chr3_1:56244828-56244847 None:intergenic 60.0%
CCACCCCATCCGCCCATATT+TGG + chr3_1:56244999-56245018 None:intergenic 60.0%
CCAAATATGGGCGGATGGGG+TGG - chr3_1:56244996-56245015 Msa0363640:intron 60.0%
!! TGAGGAACCTGGTGGTGGCA+GGG - chr3_1:56245019-56245038 Msa0363640:intron 60.0%
!! GGATCCGAAAGGGACTGGTC+CGG - chr3_1:56245146-56245165 Msa0363640:intron 60.0%
GGTCCGGTTCTTCTGAGCGA+AGG - chr3_1:56245162-56245181 Msa0363640:intron 60.0%
ACGATCACGTGACCGTGGTC+GGG - chr3_1:56245301-56245320 Msa0363640:intron 60.0%
CTCGAGATCGTGAGCGCGAA+AGG - chr3_1:56245330-56245349 Msa0363640:intron 60.0%
CGAGATCGTGAGCGCGAAAG+GGG - chr3_1:56245332-56245351 Msa0363640:intron 60.0%
GAGATCGTGAGCGCGAAAGG+GGG - chr3_1:56245333-56245352 Msa0363640:intron 60.0%
AGATCGTGAGCGCGAAAGGG+GGG - chr3_1:56245334-56245353 Msa0363640:intron 60.0%
GCATGATGAGGAGTGGGAGC+GGG - chr3_1:56245439-56245458 Msa0363640:CDS 60.0%
CATGATGAGGAGTGGGAGCG+GGG - chr3_1:56245440-56245459 Msa0363640:CDS 60.0%
ATGATGAGGAGTGGGAGCGG+GGG - chr3_1:56245441-56245460 Msa0363640:CDS 60.0%
TGTGGCCCTGCCATGACTAG+TGG + chr3_1:56246629-56246648 None:intergenic 60.0%
ACTAGTCATGGCAGGGCCAC+AGG - chr3_1:56246628-56246647 Msa0363640:five_prime_UTR 60.0%
TAGGTCCGGGGTTCAAACCC+CGG + chr3_1:56246965-56246984 None:intergenic 60.0%
GGTGTTCAGGATCCGGTGGC+TGG - chr3_1:56243676-56243695 Msa0363640:CDS 65.0%
!! GGAGTTGGATCGGGTACCGG+TGG - chr3_1:56243790-56243809 Msa0363640:intron 65.0%
!! GTTGGATCGGGTACCGGTGG+TGG - chr3_1:56243793-56243812 Msa0363640:intron 65.0%
!! GGTGGTGGAGGAGGTGAAGG+GGG - chr3_1:56244072-56244091 Msa0363640:intron 65.0%
! GGAGGTGAAGGGGGAGGTGT+TGG - chr3_1:56244081-56244100 Msa0363640:intron 65.0%
!! GGTGAAGGGGGAGGTGTTGG+TGG - chr3_1:56244084-56244103 Msa0363640:intron 65.0%
!! GAAGGGGGAGGTGTTGGTGG+TGG - chr3_1:56244087-56244106 Msa0363640:intron 65.0%
!! GGAGGTGTTGGTGGTGGAGG+AGG - chr3_1:56244093-56244112 Msa0363640:intron 65.0%
!! GGTGTTGGTGGTGGAGGAGG+TGG - chr3_1:56244096-56244115 Msa0363640:intron 65.0%
!! GTTGGTGGTGGAGGAGGTGG+TGG - chr3_1:56244099-56244118 Msa0363640:intron 65.0%
!! TGCCGGTGGTGGGGTTAACC+CGG - chr3_1:56244425-56244444 Msa0363640:intron 65.0%
TCCCGGGTTAACCCCACCAC+CGG + chr3_1:56244430-56244449 None:intergenic 65.0%
TCAGCAGGCCCCCTTCTTCC+CGG + chr3_1:56244447-56244466 None:intergenic 65.0%
!! GGCTTTGGAGGCTATCCCGG+TGG - chr3_1:56244795-56244814 Msa0363640:intron 65.0%
TGGAGGCTATCCCGGTGGTC+CGG - chr3_1:56244800-56244819 Msa0363640:intron 65.0%
!! AATGGAGGTGCCGGACCACC+GGG + chr3_1:56244813-56244832 None:intergenic 65.0%
!! GAATGGAGGTGCCGGACCAC+CGG + chr3_1:56244814-56244833 None:intergenic 65.0%
GGTCCGGCACCTCCATTCTC+GGG - chr3_1:56244816-56244835 Msa0363640:intron 65.0%
GTCCGGCACCTCCATTCTCG+GGG - chr3_1:56244817-56244836 Msa0363640:intron 65.0%
TATGGGCGGATGGGGTGGTG+AGG - chr3_1:56245001-56245020 Msa0363640:intron 65.0%
GGATGGGGTGGTGAGGAACC+TGG - chr3_1:56245008-56245027 Msa0363640:intron 65.0%
TGGGGTGGTGAGGAACCTGG+TGG - chr3_1:56245011-56245030 Msa0363640:intron 65.0%
GGTGGTGAGGAACCTGGTGG+TGG - chr3_1:56245014-56245033 Msa0363640:intron 65.0%
!! GTGAGGAACCTGGTGGTGGC+AGG - chr3_1:56245018-56245037 Msa0363640:intron 65.0%
CGCGAACGATCACGTGACCG+TGG - chr3_1:56245296-56245315 Msa0363640:intron 65.0%
GGGGGGATCGAGATCGTGAG+CGG - chr3_1:56245351-56245370 Msa0363640:intron 65.0%
GGGGGATCGAGATCGTGAGC+GGG - chr3_1:56245352-56245371 Msa0363640:intron 65.0%
AGTGGCCGGGGTTTGAACCC+CGG - chr3_1:56246957-56246976 Msa0363640:five_prime_UTR 65.0%
!! GGATCGGGTACCGGTGGTGG+TGG - chr3_1:56243796-56243815 Msa0363640:intron 70.0%
GGTGGAGGAGGTGAAGGGGG+AGG - chr3_1:56244075-56244094 Msa0363640:intron 70.0%
!! GGGGGAGGTGTTGGTGGTGG+AGG - chr3_1:56244090-56244109 Msa0363640:intron 70.0%
!! GGTGGTGGAGGAGGTGGTGG+AGG - chr3_1:56244102-56244121 Msa0363640:intron 70.0%
!! GCCGGTGGTGGGGTTAACCC+GGG - chr3_1:56244426-56244445 Msa0363640:intron 70.0%
CAGCAGGCCCCCTTCTTCCC+GGG + chr3_1:56244446-56244465 None:intergenic 70.0%
!! GAACCTGGTGGTGGCAGGGC+TGG - chr3_1:56245023-56245042 Msa0363640:intron 70.0%
TCTCCAGCCCTGCCACCACC+AGG + chr3_1:56245029-56245048 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 56243221 56247931 56243221 ID=Msa0363640;Name=Msa0363640
chr3_1 mRNA 56243221 56247931 56243221 ID=Msa0363640-mRNA-1;Parent=Msa0363640;Name=Msa0363640-mRNA-1;_AED=0.00;_eAED=0.00;_QI=2402|1|1|1|0|0.5|2|354|96
chr3_1 exon 56243221 56243745 56243221 ID=Msa0363640-mRNA-1:exon:10331;Parent=Msa0363640-mRNA-1
chr3_1 exon 56245410 56247931 56245410 ID=Msa0363640-mRNA-1:exon:10330;Parent=Msa0363640-mRNA-1
chr3_1 five_prime_UTR 56245530 56247931 56245530 ID=Msa0363640-mRNA-1:five_prime_utr;Parent=Msa0363640-mRNA-1
chr3_1 CDS 56245410 56245529 56245410 ID=Msa0363640-mRNA-1:cds;Parent=Msa0363640-mRNA-1
chr3_1 CDS 56243575 56243745 56243575 ID=Msa0363640-mRNA-1:cds;Parent=Msa0363640-mRNA-1
chr3_1 three_prime_UTR 56243221 56243574 56243221 ID=Msa0363640-mRNA-1:three_prime_utr;Parent=Msa0363640-mRNA-1
Gene Sequence

>Msa0363640

ATGGTTGTTTGGGTTTTCTGGTGGTGCTCCTCCGACCTAGAAGTTGTTGAGCAGCTGCTATTTCATTCACTTGTTCCAGTTGCATCTTGTCAGGAGTGTTTTTGCTCTCCTATGGAAATGGGACAATTGTTTGAGAAACGATACTGTTCATCTAAACCACTGGGTTGCTTTGAGGATCAAGTGCCATCAATATTGAAGAGCCAAGTCATGACAATCCTTTTTCTTACATTGAGAGTTGGAACTTTTGCTATGAAGATATTCACTTATGATTTGAATTTATGTTTTTATTAG
Protein sequence

>Msa0363640

MVVWVFWWCSSDLEVVEQLLFHSLVPVASCQECFCSPMEMGQLFEKRYCSSKPLGCFEDQVPSILKSQVMTILFLTLRVGTFAMKIFTYDLNLCFY*