AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1205490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205490 MtrunA17_Chr4g0054811 98.205 780 13 1 1 780 1 779 0.0 1569
Msa1205490 MtrunA17_Chr1g0193691 57.183 355 129 6 434 777 550 892 5.44e-118 377
Msa1205490 MtrunA17_Chr1g0193691 38.974 390 143 17 1 327 1 358 2.34e-54 202
Msa1205490 MtrunA17_Chr4g0031521 51.397 358 134 6 423 775 380 702 8.61e-109 348
Msa1205490 MtrunA17_Chr4g0031521 36.188 362 145 12 1 317 1 321 7.61e-46 175
Msa1205490 MtrunA17_Chr7g0238501 50.167 299 94 2 477 775 310 553 6.71e-93 301
Msa1205490 MtrunA17_Chr7g0238501 56.364 55 24 0 258 312 238 292 5.02e-16 82.0
Msa1205490 MtrunA17_Chr4g0039061 48.495 299 101 3 478 776 245 490 3.20e-85 279
Msa1205490 MtrunA17_Chr4g0039061 39.831 118 58 3 215 320 123 239 3.91e-19 91.7
Msa1205490 MtrunA17_Chr2g0295991 40.690 290 125 3 479 768 234 476 9.47e-60 210
Msa1205490 MtrunA17_Chr2g0295991 52.459 61 29 0 257 317 140 200 5.90e-13 72.0
Msa1205490 MtrunA17_Chr4g0067301 38.754 289 132 3 480 768 244 487 2.83e-56 201
Msa1205490 MtrunA17_Chr4g0067301 57.812 64 26 1 259 322 140 202 5.50e-14 75.5
Msa1205490 MtrunA17_Chr1g0213351 28.525 305 159 5 470 769 105 355 4.05e-34 134
Msa1205490 MtrunA17_Chr8g0371321 29.966 297 149 5 481 772 115 357 5.37e-32 129
Msa1205490 MtrunA17_Chr2g0294291 29.617 287 143 5 487 768 118 350 1.48e-30 124
Msa1205490 MtrunA17_Chr1g0207571 28.045 353 181 7 448 779 48 348 8.09e-30 122
Msa1205490 MtrunA17_Chr7g0250061 26.299 308 168 6 470 772 101 354 1.39e-28 118
Msa1205490 MtrunA17_Chr7g0263281 29.126 309 160 6 476 779 102 356 5.21e-28 116
Msa1205490 MtrunA17_Chr1g0181901 27.647 340 166 8 470 779 101 390 5.69e-28 117
Msa1205490 MtrunA17_Chr1g0211251 27.759 299 157 6 479 772 115 359 3.71e-25 108
Msa1205490 MtrunA17_Chr7g0223641 42.308 130 67 2 647 768 67 196 2.15e-23 99.0
Msa1205490 MtrunA17_Chr1g0175381 26.623 308 160 9 473 774 111 358 3.17e-23 102
Msa1205490 MtrunA17_Chr3g0089711 26.861 309 150 10 476 769 100 347 5.91e-20 92.4
Msa1205490 MtrunA17_Chr3g0089721 26.861 309 150 10 476 769 100 347 6.21e-20 92.4
Msa1205490 MtrunA17_Chr3g0089691 26.537 309 151 10 476 769 14 261 1.44e-19 90.5
Msa1205490 MtrunA17_Chr7g0256751 31.944 216 116 8 573 766 139 345 3.12e-17 85.1
Msa1205490 MtrunA17_Chr7g0256771 33.544 158 84 6 573 713 140 293 8.31e-13 70.1
Msa1205490 MtrunA17_Chr7g0256761 27.513 189 115 5 591 773 13 185 1.21e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205490 AT2G35350.1 55.298 821 288 29 1 780 1 783 0.0 764
Msa1205490 AT2G46920.3 43.148 883 361 30 1 779 1 846 0.0 563
Msa1205490 AT2G46920.1 43.148 883 361 30 1 779 1 846 0.0 563
Msa1205490 AT2G46920.2 43.148 883 361 30 1 779 1 846 0.0 563
Msa1205490 AT2G46920.4 43.148 883 361 30 1 779 1 846 0.0 563
Msa1205490 AT5G02400.1 40.000 770 300 20 40 776 33 673 9.92e-156 469
Msa1205490 AT1G07630.1 57.426 303 108 5 475 775 377 660 1.05e-108 347
Msa1205490 AT1G07630.1 36.915 363 135 14 1 317 1 315 1.71e-46 177
Msa1205490 AT2G28890.1 57.000 300 104 4 480 775 374 652 1.70e-105 338
Msa1205490 AT2G28890.1 35.952 420 171 17 1 377 1 365 1.16e-51 191
Msa1205490 AT3G09400.1 57.000 300 102 4 477 776 377 649 9.00e-104 333
Msa1205490 AT3G09400.1 33.438 317 132 10 36 316 31 304 1.17e-34 141
Msa1205490 AT3G09400.2 53.030 264 97 4 477 740 377 613 1.74e-77 263
Msa1205490 AT3G09400.2 33.438 317 132 10 36 316 31 304 1.14e-34 141
Msa1205490 AT3G16560.1 37.716 289 129 2 480 768 243 480 7.01e-60 211
Msa1205490 AT3G16560.1 58.929 56 23 0 259 314 151 206 3.70e-12 70.1
Msa1205490 AT3G16560.4 37.716 289 129 2 480 768 243 480 7.01e-60 211
Msa1205490 AT3G16560.4 58.929 56 23 0 259 314 151 206 3.70e-12 70.1
Msa1205490 AT3G16560.2 37.716 289 129 2 480 768 243 480 7.01e-60 211
Msa1205490 AT3G16560.2 58.929 56 23 0 259 314 151 206 3.70e-12 70.1
Msa1205490 AT3G16560.3 35.632 261 117 2 480 740 243 452 9.58e-47 173
Msa1205490 AT3G16560.3 58.929 56 23 0 259 314 151 206 3.55e-12 69.7
Msa1205490 AT3G12620.2 27.922 308 163 5 470 772 108 361 1.36e-33 134
Msa1205490 AT3G12620.1 27.922 308 163 5 470 772 108 361 1.36e-33 134
Msa1205490 AT3G55050.1 30.612 294 145 5 482 770 121 360 1.51e-32 130
Msa1205490 AT3G55050.2 30.612 294 145 5 482 770 121 360 1.51e-32 130
Msa1205490 AT4G38520.2 29.861 288 143 5 484 766 120 353 9.35e-32 129
Msa1205490 AT4G38520.1 29.861 288 143 5 484 766 120 353 9.35e-32 129
Msa1205490 AT5G66080.2 30.952 294 144 5 481 769 14 253 1.70e-31 125
Msa1205490 AT3G17090.1 29.897 291 144 5 483 768 123 358 5.45e-31 126
Msa1205490 AT5G66080.1 30.640 297 147 5 481 772 118 360 7.48e-31 125
Msa1205490 AT4G33920.1 27.966 354 183 8 448 780 48 350 6.91e-30 122
Msa1205490 AT4G33920.2 28.664 307 163 6 479 780 12 267 6.93e-30 120
Msa1205490 AT3G51370.1 28.231 294 152 5 481 769 115 354 1.36e-29 122
Msa1205490 AT3G51370.3 28.231 294 152 5 481 769 115 354 1.36e-29 122
Msa1205490 AT3G51370.2 28.912 294 150 5 481 769 30 269 2.37e-29 119
Msa1205490 AT5G02760.1 32.302 291 136 5 483 768 110 344 3.15e-29 120
Msa1205490 AT4G33920.3 29.167 288 148 6 498 780 1 237 6.47e-28 114
Msa1205490 AT5G06750.2 27.797 295 157 6 483 772 38 281 1.78e-25 108
Msa1205490 AT5G06750.3 27.797 295 157 6 483 772 120 363 2.33e-25 109
Msa1205490 AT5G06750.1 27.797 295 157 6 483 772 120 363 2.33e-25 109
Msa1205490 AT3G17090.2 28.390 236 113 4 483 713 123 307 6.49e-22 97.8

Find 315 sgRNAs with CRISPR-Local

Find 533 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGATGGACTTGATCTTTC+TGG 0.099082 8_1:-61842745 Msa1205490:CDS
AGTGACAGAACTTGCGTATT+TGG 0.202868 8_1:-61842392 Msa1205490:CDS
ATCCAATTTACCAGCTTTCT+TGG 0.203939 8_1:+61839579 None:intergenic
GAAGTTGTTACCGTGGAATT+TGG 0.238013 8_1:-61842557 Msa1205490:CDS
AGGTTCTGGTTTGGTGAATA+TGG 0.245862 8_1:-61842848 Msa1205490:CDS
ATGTTTCGTAATGAATTTAT+TGG 0.257607 8_1:-61839805 Msa1205490:CDS
AGCAGGGGTGGTTGTTTGTT+GGG 0.260464 8_1:-61843026 Msa1205490:CDS
TCCCTCCCCTTTGTCCCTTT+CGG 0.266738 8_1:-61843943 Msa1205490:five_prime_UTR
CCATTACCCTCCTTATGTTT+TGG 0.271568 8_1:+61842583 None:intergenic
TAGAGTTAGGAGATTCAAAA+TGG 0.279473 8_1:-61837946 Msa1205490:three_prime_UTR
TGGTGGGAGGAGGCGGAAAT+TGG 0.282453 8_1:-61842464 Msa1205490:CDS
AAGTTGTTACCGTGGAATTT+GGG 0.282468 8_1:-61842556 Msa1205490:CDS
CAATGTTCATAATGAGCTTC+AGG 0.293356 8_1:-61842944 Msa1205490:CDS
GAAGCTATGACATCATCTTT+AGG 0.293633 8_1:+61838403 None:intergenic
GGCGGCGCCGGTGGGGATTC+CGG 0.294891 8_1:-61843318 Msa1205490:CDS
CTTAAGGTCACCAGAGCATT+TGG 0.295370 8_1:-61841430 Msa1205490:CDS
AGAAAGGTGTGTCAGGGTTT+AGG 0.301426 8_1:-61843233 Msa1205490:CDS
GGTAAGGGTAATATTGTAAA+TGG 0.309964 8_1:-61843468 Msa1205490:CDS
GAAAACAAACCCTCTGCTTC+TGG 0.312232 8_1:-61842499 Msa1205490:CDS
GGATATGACGGAAAAGCTTC+TGG 0.313191 8_1:-61842371 Msa1205490:CDS
ATGAGCTTCAGGGTTTGTTT+TGG 0.315360 8_1:-61842933 Msa1205490:CDS
ATGGTACAACAGACTGAAAT+TGG 0.316789 8_1:-61842829 Msa1205490:CDS
GAAGAGTCCTTTGCTTTAGA+TGG 0.323123 8_1:-61842148 Msa1205490:CDS
GAGCAGGGGTGGTTGTTTGT+TGG 0.330236 8_1:-61843027 Msa1205490:CDS
CCACCGGCGCCGCCGTTAAT+CGG 0.331241 8_1:+61843327 None:intergenic
CCCCTTTGTCCCTTTCGGAT+TGG 0.332221 8_1:-61843938 Msa1205490:five_prime_UTR
ACTCCAGCTCCCATCACATT+AGG 0.332953 8_1:+61843867 None:intergenic
CTGGTAGTGGTGGTGGGAGG+AGG 0.336277 8_1:-61842474 Msa1205490:CDS
CACCATATCAAATTAGAGTT+AGG 0.338175 8_1:-61837959 Msa1205490:three_prime_UTR
CTCCTAACTCTAATTTGATA+TGG 0.338585 8_1:+61837957 None:intergenic
TCGGGTTCATGTGGTGGTTT+CGG 0.339032 8_1:-61843052 Msa1205490:CDS
GATCCCTTGGGCTTAATCTA+TGG 0.344114 8_1:+61839743 None:intergenic
AAAAGCGGTTTCACGAAAAT+CGG 0.344431 8_1:+61843608 None:intergenic
AAGCTATGACATCATCTTTA+GGG 0.347886 8_1:+61838404 None:intergenic
GAGGGAGAAAATTCAGGTTC+TGG 0.349852 8_1:-61842862 Msa1205490:CDS
AAATCCTGAACTTGCTTTGA+TGG 0.353828 8_1:-61842344 Msa1205490:CDS
CACCTCCACTGCCTTCTCCT+TGG 0.354125 8_1:+61843122 None:intergenic
ACCGTGGAATTTGGGGAATC+AGG 0.355154 8_1:-61842548 Msa1205490:CDS
CGATTAACGGCGGCGCCGGT+GGG 0.364404 8_1:-61843326 Msa1205490:CDS
TTCTCAAGTTGAGAGCTTCA+TGG 0.365862 8_1:-61839662 Msa1205490:CDS
ATTTACAATATTACCCTTAC+CGG 0.369542 8_1:+61843470 None:intergenic
AGAGAAAGAAGAAAAGTCTA+AGG 0.374405 8_1:-61842524 Msa1205490:CDS
TTAAGGTCACCAGAGCATTT+GGG 0.376676 8_1:-61841429 Msa1205490:CDS
TGTGGTGGTTTCGGAGGAGC+AGG 0.376868 8_1:-61843043 Msa1205490:CDS
CAGTGGGCGTTAGGGAAGGC+TGG 0.377014 8_1:-61843081 Msa1205490:CDS
AGTAAAATGTTGGTGTATAT+TGG 0.377380 8_1:-61838060 Msa1205490:three_prime_UTR
GGACAAAGGGGAGGGAAGCG+AGG 0.381985 8_1:+61843950 None:intergenic
GGGTCCGGTGGATCATGATT+TGG 0.382243 8_1:-61842443 Msa1205490:CDS
GGAAGGAAGAAAGGTGTGTC+AGG 0.387929 8_1:-61843240 Msa1205490:CDS
AAGATGGACTTGATCTTTCT+GGG 0.389359 8_1:-61842744 Msa1205490:CDS
TGTTGGGAGGAAAGAGGTTC+CGG 0.389401 8_1:-61843145 Msa1205490:CDS
ATAGTCAATGATAGAGTTAA+AGG 0.391835 8_1:-61841457 Msa1205490:CDS
CCGATTAACGGCGGCGCCGG+TGG 0.392761 8_1:-61843327 Msa1205490:CDS
TCTATCATTGACTATGCAAC+GGG 0.393238 8_1:+61841465 None:intergenic
TTTCTGTTACGTTAGATCTT+CGG 0.394176 8_1:-61843730 Msa1205490:CDS
AGACATCGCAGACAGGCTTA+TGG 0.394262 8_1:-61838269 Msa1205490:three_prime_UTR
AAGCCTGTCTGCGATGTCTA+AGG 0.396094 8_1:+61838273 None:intergenic
TACAAGTGTACTGATTTAAC+TGG 0.398388 8_1:-61838031 Msa1205490:three_prime_UTR
TTATGAGCCCAAGGAGGATC+AGG 0.399296 8_1:-61842239 Msa1205490:CDS
CGGATTGGACTTAGGCGGTT+GGG 0.400961 8_1:-61843923 Msa1205490:five_prime_UTR
AAGATGGACGGGTGCGGAAA+TGG 0.405008 8_1:+61838185 None:intergenic
GGAAGTACCCTGATCCTCCT+TGG 0.406399 8_1:+61842231 None:intergenic
CACCGGAATCTACTTCTCTT+CGG 0.409205 8_1:-61843668 Msa1205490:CDS
TCTGGCACTGGTAGTGGTGG+TGG 0.411034 8_1:-61842481 Msa1205490:CDS
GAAAAGGAGGGAGAAAATTC+AGG 0.411785 8_1:-61842868 Msa1205490:CDS
AGAAAATTCAGGTTCTGGTT+TGG 0.412099 8_1:-61842857 Msa1205490:CDS
TTGTTGTTCCGGTGTTGAAC+CGG 0.413218 8_1:+61843819 None:intergenic
TCCACTGCCTTCTCCTTGGC+CGG 0.417303 8_1:+61843126 None:intergenic
GCGGTTGGGTTCATCTGAAC+CGG 0.420379 8_1:-61843909 Msa1205490:five_prime_UTR
GAAAGATCAAGTCCATCTTC+AGG 0.421503 8_1:+61842748 None:intergenic
GGTGGGAGGAGGCGGAAATT+GGG 0.421685 8_1:-61842463 Msa1205490:CDS
CATTAAAATCTGAGATTCCT+AGG 0.422412 8_1:+61838321 None:intergenic
TGACAAACCGTTCTTCAGTC+TGG 0.425095 8_1:+61842630 None:intergenic
TCCAATCCGAAAGGGACAAA+GGG 0.426458 8_1:+61843937 None:intergenic
GCGCACTCTGGGCCGATTAA+CGG 0.427554 8_1:-61843339 Msa1205490:CDS
GGAAGAATCTGGAAATCGTC+AGG 0.427584 8_1:-61838498 Msa1205490:CDS
CGGAAGAGATGTTCCATTCT+CGG 0.428358 8_1:-61843283 Msa1205490:CDS
CTCCAGCTCCCATCACATTA+GGG 0.429257 8_1:+61843868 None:intergenic
TCTGCTTCTGGCACTGGTAG+TGG 0.429359 8_1:-61842487 Msa1205490:CDS
CTGGCACTGGTAGTGGTGGT+GGG 0.429653 8_1:-61842480 Msa1205490:CDS
GAAGCGGCCGTGGGTGGTGC+CGG 0.431595 8_1:-61843178 Msa1205490:CDS
TTCAACTATGCTCTCACTGC+TGG 0.432572 8_1:+61842168 None:intergenic
CAGCTCTTCAATTAAATGTT+GGG 0.433697 8_1:+61839615 None:intergenic
TAAGCTTACTTCTTTAATGC+TGG 0.435863 8_1:+61842033 None:intergenic
CTTCGGAGAAGAAGCGGCCG+TGG 0.436890 8_1:-61843188 Msa1205490:CDS
GGGGATTCCGGTGGTGTAGG+TGG 0.441277 8_1:-61843306 Msa1205490:CDS
GAACCCATCAAAGCAAGTTC+AGG 0.441311 8_1:+61842340 None:intergenic
GAGTAAACGGCGTAGGTTGT+GGG 0.442040 8_1:-61842788 Msa1205490:CDS
GAAGGGAAGCAGGATATGTA+TGG 0.443366 8_1:+61839775 None:intergenic
AGGGAAGGCTGGGGAAGATC+GGG 0.444910 8_1:-61843070 Msa1205490:CDS
GTAGTGGTGGTGGGAGGAGG+CGG 0.445074 8_1:-61842471 Msa1205490:CDS
ACTATGCAACGGGGATCATC+AGG 0.445287 8_1:+61841475 None:intergenic
GAAGTACCCTGATCCTCCTT+GGG 0.445862 8_1:+61842232 None:intergenic
TGAGGCGTTCAACTTTCTGT+TGG 0.446080 8_1:-61838465 Msa1205490:three_prime_UTR
GACTGAAATTGGACCGGCTG+TGG 0.448174 8_1:-61842818 Msa1205490:CDS
AGAGTAAACGGCGTAGGTTG+TGG 0.448331 8_1:-61842789 Msa1205490:CDS
CCTCCTAACGGTGCCGAGAA+TGG 0.451026 8_1:+61843270 None:intergenic
CCGATTGAGAGTGCGCACTC+TGG 0.451055 8_1:-61843351 Msa1205490:CDS
ACGTGTATGTTATGAATGTT+GGG 0.451393 8_1:-61842285 Msa1205490:CDS
GACGTGTATGTTATGAATGT+TGG 0.451710 8_1:-61842286 Msa1205490:CDS
GGGCCGATTAACGGCGGCGC+CGG 0.452053 8_1:-61843330 Msa1205490:CDS
ATCCCTAATGTGATGGGAGC+TGG 0.452819 8_1:-61843870 Msa1205490:exon
GCCGCCGTTGGAGGAGGTTG+TGG 0.454293 8_1:-61843507 Msa1205490:CDS
TATCACTTGAAGGAAGAATC+TGG 0.454496 8_1:-61838509 Msa1205490:CDS
TAGGGAAGGCTGGGGAAGAT+CGG 0.454811 8_1:-61843071 Msa1205490:CDS
TCTTCCGCCGCCGTTGGAGG+AGG 0.455984 8_1:-61843513 Msa1205490:CDS
GTCCCTTTCGGATTGGACTT+AGG 0.460445 8_1:-61843931 Msa1205490:five_prime_UTR
CTGTGGGAACGGAGAGTAAA+CGG 0.463635 8_1:-61842801 Msa1205490:CDS
TAATAGTTCTGTTCCGAAAA+CGG 0.463952 8_1:-61843556 Msa1205490:CDS
GTTGTGTTCTTGTTTCGAAC+CGG 0.465481 8_1:-61843838 Msa1205490:CDS
ATTTCAACGGAAGGTGTCTT+CGG 0.465761 8_1:-61843205 Msa1205490:CDS
AGGATCAGGAACTGATCCCT+TGG 0.465955 8_1:+61839730 None:intergenic
GCAGCTCTTCAATTAAATGT+TGG 0.467121 8_1:+61839614 None:intergenic
TCGGATTGGACTTAGGCGGT+TGG 0.467207 8_1:-61843924 Msa1205490:five_prime_UTR
TTGGCTGAAGATCCTGAAGA+TGG 0.467894 8_1:-61842760 Msa1205490:CDS
TTGGGGCAGGATCTTTGAAA+AGG 0.471296 8_1:-61841411 Msa1205490:CDS
CGATTGAGAGTGCGCACTCT+GGG 0.472196 8_1:-61843350 Msa1205490:CDS
GTTCCATTCTCGGCACCGTT+AGG 0.473929 8_1:-61843273 Msa1205490:CDS
AATAGTAACGTCTTGGTTGT+CGG 0.474148 8_1:+61843791 None:intergenic
CCAGAGTGCGCACTCTCAAT+CGG 0.475630 8_1:+61843351 None:intergenic
CTCCGATCGCTTTCTCTCAC+CGG 0.476274 8_1:-61843685 Msa1205490:CDS
TCCGGCCAAGGAGAAGGCAG+TGG 0.476718 8_1:-61843127 Msa1205490:CDS
AAAGCGGTTTCACGAAAATC+GGG 0.477443 8_1:+61843609 None:intergenic
CTCATTGCCGACCTTGATTG+TGG 0.478209 8_1:+61842111 None:intergenic
GAACGGTTTGTCAAAGCATA+AGG 0.480337 8_1:-61842620 Msa1205490:CDS
AACCATCAGATGAGAGGATC+AGG 0.482736 8_1:+61839716 None:intergenic
TCATGATGATGTTACTGTTA+TGG 0.483255 8_1:-61838535 Msa1205490:CDS
TGATGGTTTGCCAAAACATA+AGG 0.483346 8_1:-61842593 Msa1205490:CDS
TAGCAATGCCAATGCAGGTT+CGG 0.483560 8_1:-61842680 Msa1205490:CDS
AATCCTGAACTTGCTTTGAT+GGG 0.486164 8_1:-61842343 Msa1205490:CDS
TTTGATGGGTTCATGTCTGT+TGG 0.486882 8_1:-61842329 Msa1205490:CDS
AATGCCAATGCAGGTTCGGC+AGG 0.487353 8_1:-61842676 Msa1205490:CDS
AATGTTCATAATGAGCTTCA+GGG 0.487722 8_1:-61842943 Msa1205490:CDS
GGGATGTATGGAAGGAAGAA+AGG 0.487873 8_1:-61843249 Msa1205490:CDS
TTGATCTTTCTGGGTCGGAT+AGG 0.489502 8_1:-61842735 Msa1205490:CDS
GGATCAGGAACTGATCCCTT+GGG 0.489833 8_1:+61839731 None:intergenic
AACCGAAGAGAAGTAGATTC+CGG 0.490054 8_1:+61843666 None:intergenic
TTACTCTCCGTTCCCACAGC+CGG 0.491950 8_1:+61842805 None:intergenic
GAAAGAAGAAAAGTCTAAGG+TGG 0.493865 8_1:-61842521 Msa1205490:CDS
TAACCCCGTTGAGGTGGAAA+AGG 0.494170 8_1:-61842884 Msa1205490:CDS
AAACCCTCTGCTTCTGGCAC+TGG 0.494612 8_1:-61842493 Msa1205490:CDS
TTCCTGATCCTCTCATCTGA+TGG 0.496445 8_1:-61839718 Msa1205490:CDS
GGTGGGGATTCCGGTGGTGT+AGG 0.497618 8_1:-61843309 Msa1205490:CDS
GAGGGAAGAAGAGTGAAGTA+AGG 0.498531 8_1:+61843969 None:intergenic
CTCCGTGCAGCCAAGAAAGC+TGG 0.499456 8_1:-61839589 Msa1205490:intron
GAAGTTGAATGATGCCGTAC+TGG 0.501042 8_1:-61839830 Msa1205490:CDS
GCACCGTTAGGAGGGATGTA+TGG 0.503783 8_1:-61843261 Msa1205490:CDS
AGATCCTGCCCCAAATGCTC+TGG 0.504656 8_1:+61841420 None:intergenic
TCTTCAATTAAATGTTGGGC+AGG 0.506729 8_1:+61839619 None:intergenic
AGTGTTAGCAATGCCAATGC+AGG 0.507381 8_1:-61842685 Msa1205490:CDS
AGAGGTTCCGGCCAAGGAGA+AGG 0.509866 8_1:-61843133 Msa1205490:CDS
GTTACGTTAGATCTTCGGCC+AGG 0.510157 8_1:-61843725 Msa1205490:CDS
GACAAAGGGGAGGGAAGCGA+GGG 0.512267 8_1:+61843951 None:intergenic
GATTCCGGTGGTGTAGGTGG+CGG 0.515125 8_1:-61843303 Msa1205490:CDS
CCAAAACATAAGGAGGGTAA+TGG 0.517060 8_1:-61842583 Msa1205490:CDS
CAGTGAAAATAGTAACGTCT+TGG 0.517578 8_1:+61843784 None:intergenic
TAGAGTTAAAGGTCGTCTTA+AGG 0.517854 8_1:-61841446 Msa1205490:CDS
TGGGGCAGGATCTTTGAAAA+GGG 0.517879 8_1:-61841410 Msa1205490:intron
CCCCGTTGAGGTGGAAAAGG+AGG 0.521172 8_1:-61842881 Msa1205490:CDS
AAATATGACAATCTGTAGCC+GGG 0.521547 8_1:-61837992 Msa1205490:three_prime_UTR
ACTGCCTGCCGAACCTGCAT+TGG 0.521699 8_1:+61842672 None:intergenic
GTGACGTACTGAAGGGAAGC+AGG 0.522740 8_1:+61839765 None:intergenic
GAAATATGACAATCTGTAGC+CGG 0.523145 8_1:-61837993 Msa1205490:three_prime_UTR
GAAGAATCTTCCGCCGCCGT+TGG 0.523536 8_1:-61843519 Msa1205490:CDS
AACTCACCACCTCTCGGCAC+AGG 0.523662 8_1:+61843405 None:intergenic
TTCAACACCGGCACCACCCA+CGG 0.524658 8_1:+61843171 None:intergenic
TACCAGCTTTCTTGGCTGCA+CGG 0.525448 8_1:+61839587 None:intergenic
GTTATGGTGATATCACTTGA+AGG 0.526658 8_1:-61838519 Msa1205490:CDS
CTTCTTTAATGCTGGTGCTG+TGG 0.526929 8_1:+61842041 None:intergenic
CAATGTGGAATCTGCAAGCA+AGG 0.527206 8_1:-61842209 Msa1205490:CDS
AATCTATGGTGACGTACTGA+AGG 0.529114 8_1:+61839757 None:intergenic
CGCCTAAGTCCAATCCGAAA+GGG 0.530408 8_1:+61843929 None:intergenic
AGTGGGCGTTAGGGAAGGCT+GGG 0.530607 8_1:-61843080 Msa1205490:CDS
ACAATCAAGGTCGGCAATGA+GGG 0.532238 8_1:-61842109 Msa1205490:CDS
TGGATATTCCGCAAGGAGAT+CGG 0.532409 8_1:-61838566 Msa1205490:CDS
GATTAACGGCGGCGCCGGTG+GGG 0.534199 8_1:-61843325 Msa1205490:CDS
CACAATCAAGGTCGGCAATG+AGG 0.534807 8_1:-61842110 Msa1205490:CDS
GTAATGTGCAGTGGGCGTTA+GGG 0.537651 8_1:-61843089 Msa1205490:CDS
AATTGGACCGGCTGTGGGAA+CGG 0.538368 8_1:-61842812 Msa1205490:CDS
GGTTTCACGAAAATCGGGTC+GGG 0.539243 8_1:+61843614 None:intergenic
ACGGGGTTATGACTCTCCAT+TGG 0.539445 8_1:+61842898 None:intergenic
GTGGTGGTTTCGGAGGAGCA+GGG 0.540974 8_1:-61843042 Msa1205490:CDS
GTCACCAGAGCATTTGGGGC+AGG 0.541067 8_1:-61841424 Msa1205490:CDS
GGAAGATCGGGTTCATGTGG+TGG 0.541143 8_1:-61843058 Msa1205490:CDS
GAATCTTCCGCCGCCGTTGG+AGG 0.542089 8_1:-61843516 Msa1205490:CDS
TGGTTTCGGAGGAGCAGGGG+TGG 0.544201 8_1:-61843038 Msa1205490:CDS
GAGGAAAGAGGTTCCGGCCA+AGG 0.544675 8_1:-61843139 Msa1205490:CDS
CTAACTCTAATTTGATATGG+TGG 0.544749 8_1:+61837960 None:intergenic
ATTACGAAACATTTCCAGTA+CGG 0.546308 8_1:+61839816 None:intergenic
GTTTCGAACCGGTTCAACAC+CGG 0.546334 8_1:-61843827 Msa1205490:CDS
TGTTGGGCAGGATCTCCGTC+TGG 0.546419 8_1:+61839631 None:intergenic
CGTAACAGAAAGAATGACCT+AGG 0.547569 8_1:+61843742 None:intergenic
GCACTGGTAGTGGTGGTGGG+AGG 0.548400 8_1:-61842477 Msa1205490:CDS
TCAAAGCATAAGGAGGGTGA+TGG 0.551649 8_1:-61842610 Msa1205490:CDS
AAGGGAAGCAGGATATGTAT+GGG 0.551727 8_1:+61839776 None:intergenic
TTACTACATCCCTAATGTGA+TGG 0.552278 8_1:-61843877 Msa1205490:exon
TACTACATCCCTAATGTGAT+GGG 0.552434 8_1:-61843876 Msa1205490:exon
TGGACTTGATCTTTCTGGGT+CGG 0.553674 8_1:-61842740 Msa1205490:CDS
CTCTATCATTGACTATGCAA+CGG 0.554400 8_1:+61841464 None:intergenic
GGAGAAGAAGCGGCCGTGGG+TGG 0.554476 8_1:-61843184 Msa1205490:CDS
CAGGTTCGGCAGGCAGTAGA+CGG 0.555129 8_1:-61842666 Msa1205490:CDS
TGACCTAGGGTTTCATCTAA+CGG 0.556271 8_1:+61843756 None:intergenic
TAGGAAGGCATTTCAACGGA+AGG 0.557068 8_1:-61843214 Msa1205490:CDS
GTCCAATCCGAAAGGGACAA+AGG 0.557390 8_1:+61843936 None:intergenic
TCAAACTGAAACCACAATCA+AGG 0.557456 8_1:-61842122 Msa1205490:CDS
TGGTGGTTTCGGAGGAGCAG+GGG 0.557886 8_1:-61843041 Msa1205490:CDS
CTTCCTTAGACATCGCAGAC+AGG 0.559147 8_1:-61838276 Msa1205490:three_prime_UTR
TGCTCAAGAAATGAGGTTGG+CGG 0.560141 8_1:-61842083 Msa1205490:CDS
ACCACAACCTCCTCCAACGG+CGG 0.560322 8_1:+61843506 None:intergenic
GAGGAGGCGGAAATTGGGTC+CGG 0.562555 8_1:-61842458 Msa1205490:CDS
ACAACCTCCTCCAACGGCGG+CGG 0.565002 8_1:+61843509 None:intergenic
CACTCTGGGCCGATTAACGG+CGG 0.566289 8_1:-61843336 Msa1205490:CDS
GAGTCATAACCCCGTTGAGG+TGG 0.567015 8_1:-61842890 Msa1205490:CDS
CTTGCTTGCAGATTCCACAT+TGG 0.567122 8_1:+61842210 None:intergenic
TCCTGATTCCCCAAATTCCA+CGG 0.568105 8_1:+61842547 None:intergenic
AAAATGTTGGTGTATATTGG+TGG 0.568578 8_1:-61838057 Msa1205490:three_prime_UTR
TACACCACCGGAATCCCCAC+CGG 0.568992 8_1:+61843311 None:intergenic
ATCCGAAAGGGACAAAGGGG+AGG 0.569112 8_1:+61843941 None:intergenic
CATTCTCGGCACCGTTAGGA+GGG 0.569173 8_1:-61843269 Msa1205490:CDS
ATCATCTTTAGGGCAATCCC+AGG 0.570116 8_1:+61838414 None:intergenic
TTGAGTTCCATCTAAAGCAA+AGG 0.574261 8_1:+61842141 None:intergenic
GAAGGAAGAAAGGTGTGTCA+GGG 0.575606 8_1:-61843239 Msa1205490:CDS
ACCAGAAATAGCTTTAAAAG+CGG 0.576874 8_1:+61843593 None:intergenic
CTAAGAACCGATTCATGAGT+AGG 0.577073 8_1:+61843639 None:intergenic
CCCGTTGAGGTGGAAAAGGA+GGG 0.577243 8_1:-61842880 Msa1205490:CDS
TGGGGAAGATCGGGTTCATG+TGG 0.578579 8_1:-61843061 Msa1205490:CDS
GGTTCATGTGGTGGTTTCGG+AGG 0.579440 8_1:-61843049 Msa1205490:CDS
AGCAAGGGAGATGTTCGTGT+TGG 0.581556 8_1:-61842193 Msa1205490:CDS
CTTCAACCTGTGCCGAGAGG+TGG 0.582633 8_1:-61843411 Msa1205490:CDS
TTCTGCTCAAGAAATGAGGT+TGG 0.583278 8_1:-61842086 Msa1205490:CDS
CGTTAGGAGGGATGTATGGA+AGG 0.583560 8_1:-61843257 Msa1205490:CDS
TCCGAAAGGGACAAAGGGGA+GGG 0.584122 8_1:+61843942 None:intergenic
ACTGAAATTGGACCGGCTGT+GGG 0.586327 8_1:-61842817 Msa1205490:CDS
TAAGGTCACCAGAGCATTTG+GGG 0.586392 8_1:-61841428 Msa1205490:CDS
CTTCCATACATCCCTCCTAA+CGG 0.586636 8_1:+61843258 None:intergenic
TGATGGGAGCTGGAGTTTCG+AGG 0.588110 8_1:-61843860 Msa1205490:CDS
AGGGTTCTGCTCAAGAAATG+AGG 0.591211 8_1:-61842090 Msa1205490:CDS
TTCGGAGAAGAAGCGGCCGT+GGG 0.593745 8_1:-61843187 Msa1205490:CDS
CGGTTTCACGAAAATCGGGT+CGG 0.594346 8_1:+61843613 None:intergenic
TCTTCCGCCACCTACACCAC+CGG 0.595356 8_1:+61843299 None:intergenic
TGTGCAGTGGGCGTTAGGGA+AGG 0.596261 8_1:-61843085 Msa1205490:CDS
AACATAAGGAGGGTAATGGT+AGG 0.596849 8_1:-61842579 Msa1205490:CDS
AGGGAAGAAGAGTGAAGTAA+GGG 0.598427 8_1:+61843970 None:intergenic
TTGTTTGTTGGGATTTACGA+CGG 0.599779 8_1:-61843015 Msa1205490:CDS
TTGGGAACTTGATGAACCAA+TGG 0.600194 8_1:-61842914 Msa1205490:CDS
GGCCAAGGAGAAGGCAGTGG+AGG 0.600282 8_1:-61843124 Msa1205490:CDS
AGTACGGCATCATTCAACTT+CGG 0.600363 8_1:+61839832 None:intergenic
ATCTATGGTGACGTACTGAA+GGG 0.601252 8_1:+61839758 None:intergenic
GTGCGCACTCTCAATCGGAC+CGG 0.602532 8_1:+61843356 None:intergenic
CGGTTTGTCAAAGCATAAGG+AGG 0.603543 8_1:-61842617 Msa1205490:CDS
GCTTCTGGCACTGGTAGTGG+TGG 0.603968 8_1:-61842484 Msa1205490:CDS
TGGTTTGCCAAAACATAAGG+AGG 0.605933 8_1:-61842590 Msa1205490:CDS
CCGCCTAAGTCCAATCCGAA+AGG 0.607046 8_1:+61843928 None:intergenic
GCCACCACAACCTCCTCCAA+CGG 0.608052 8_1:+61843503 None:intergenic
TTCCGGTGAGAGAAAGCGAT+CGG 0.608311 8_1:+61843683 None:intergenic
GGCTGAGCCAAGTAAAATGT+TGG 0.608434 8_1:-61838070 Msa1205490:three_prime_UTR
ACTTGCGTATTTGGATATGA+CGG 0.608770 8_1:-61842383 Msa1205490:CDS
ACTACCAGTGCCAGAAGCAG+AGG 0.609229 8_1:+61842489 None:intergenic
AAAACCAAATCATGATCCAC+CGG 0.609288 8_1:+61842439 None:intergenic
CTCCCAACAAAATTCAACAC+CGG 0.609475 8_1:+61843159 None:intergenic
AGAAAGCGATCGGAGTGAGT+CGG 0.611067 8_1:+61843693 None:intergenic
AGTTGTTACCGTGGAATTTG+GGG 0.613438 8_1:-61842555 Msa1205490:CDS
ACAACAGACTGAAATTGGAC+CGG 0.613451 8_1:-61842824 Msa1205490:CDS
GCCGTTGGAGGAGGTTGTGG+TGG 0.613965 8_1:-61843504 Msa1205490:CDS
AAATGTTGGTGTATATTGGT+GGG 0.615835 8_1:-61838056 Msa1205490:three_prime_UTR
AGGTGTCTTCGGAGAAGAAG+CGG 0.621311 8_1:-61843194 Msa1205490:CDS
CCTCTCGGCACAGGTTGAAG+CGG 0.626602 8_1:+61843414 None:intergenic
TTCATGGAAAAGTTTCCAGA+CGG 0.626955 8_1:-61839646 Msa1205490:CDS
TATGAGCCCAAGGAGGATCA+GGG 0.626958 8_1:-61842238 Msa1205490:CDS
CCTTTCGGATTGGACTTAGG+CGG 0.628350 8_1:-61843928 Msa1205490:five_prime_UTR
TTGCTGTCCAGACTGAAGAA+CGG 0.628481 8_1:-61842637 Msa1205490:CDS
AGGTGTGTCAGGGTTTAGGA+AGG 0.628635 8_1:-61843229 Msa1205490:CDS
ATATGGTGGAAATCCACCCC+CGG 0.628895 8_1:+61837974 None:intergenic
TACTTCCTCCGATCTCCTTG+CGG 0.628898 8_1:+61838558 None:intergenic
GAGGCGGAAATTGGGTCCGG+TGG 0.633186 8_1:-61842455 Msa1205490:CDS
TGTAGCACATTATGAGCCCA+AGG 0.633891 8_1:-61842248 Msa1205490:CDS
AATGTTGGTGTATATTGGTG+GGG 0.633998 8_1:-61838055 Msa1205490:three_prime_UTR
GTGGGCGTTAGGGAAGGCTG+GGG 0.638967 8_1:-61843079 Msa1205490:CDS
GGTTTAGGAAGGCATTTCAA+CGG 0.639426 8_1:-61843218 Msa1205490:CDS
GTGAGTCGGAGAAAGAAACC+TGG 0.642081 8_1:+61843707 None:intergenic
ATCTTTAGGGCAATCCCAGG+TGG 0.642322 8_1:+61838417 None:intergenic
TTAGGAGATTCAAAATGGAG+AGG 0.643307 8_1:-61837941 Msa1205490:three_prime_UTR
GAACGGAGAGTAAACGGCGT+AGG 0.647260 8_1:-61842795 Msa1205490:CDS
GAACCGTTAGATGAAACCCT+AGG 0.650582 8_1:-61843759 Msa1205490:CDS
AATGTGGAATCTGCAAGCAA+GGG 0.652423 8_1:-61842208 Msa1205490:CDS
AAATGAGAGTAATGTGCAGT+GGG 0.653248 8_1:-61843097 Msa1205490:CDS
GATACAAACCATCAGATGAG+AGG 0.653579 8_1:+61839710 None:intergenic
GTAACAGAAAGAATGACCTA+GGG 0.653602 8_1:+61843743 None:intergenic
GTCACCATAGATTAAGCCCA+AGG 0.654258 8_1:-61839747 Msa1205490:CDS
GGCGCCGGTGGGGATTCCGG+TGG 0.657142 8_1:-61843315 Msa1205490:CDS
AATATGACAATCTGTAGCCG+GGG 0.659107 8_1:-61837991 Msa1205490:three_prime_UTR
GTTCGGCAGGCAGTAGACGG+TGG 0.661155 8_1:-61842663 Msa1205490:CDS
ACTGAAACCACAATCAAGGT+CGG 0.661842 8_1:-61842118 Msa1205490:CDS
TCACCATAGATTAAGCCCAA+GGG 0.662089 8_1:-61839746 Msa1205490:CDS
GGAGAGTCATAACCCCGTTG+AGG 0.669683 8_1:-61842893 Msa1205490:CDS
GAAGAATCTGGAAATCGTCA+GGG 0.671865 8_1:-61838497 Msa1205490:CDS
CTACCAGTGCCAGAAGCAGA+GGG 0.672046 8_1:+61842490 None:intergenic
CCGCTTCAACCTGTGCCGAG+AGG 0.673541 8_1:-61843414 Msa1205490:CDS
GAATTGCTGGATATTCCGCA+AGG 0.675248 8_1:-61838573 Msa1205490:CDS
GGTTTGCCAAAACATAAGGA+GGG 0.677723 8_1:-61842589 Msa1205490:CDS
ATGGTAGGAAGTTGTTACCG+TGG 0.680126 8_1:-61842564 Msa1205490:CDS
GGTTTGTCAAAGCATAAGGA+GGG 0.688138 8_1:-61842616 Msa1205490:CDS
CAGCTTTCTTGGCTGCACGG+AGG 0.689514 8_1:+61839590 None:intergenic
ACGGGTGCGGAAATGGTGAA+CGG 0.689905 8_1:+61838192 None:intergenic
AGGGAAGCAGGATATGTATG+GGG 0.690908 8_1:+61839777 None:intergenic
ATATTCCGCAAGGAGATCGG+AGG 0.695322 8_1:-61838563 Msa1205490:CDS
CCAATCCGAAAGGGACAAAG+GGG 0.695723 8_1:+61843938 None:intergenic
GGATCAGGGTACTTCCAATG+TGG 0.706383 8_1:-61842224 Msa1205490:CDS
ATATGACAATCTGTAGCCGG+GGG 0.713147 8_1:-61837990 Msa1205490:three_prime_UTR
GAAGCTCATTATGAACATTG+CGG 0.714210 8_1:+61842947 None:intergenic
AAAATGAGAGTAATGTGCAG+TGG 0.715636 8_1:-61843098 Msa1205490:CDS
CGTGTATGTTATGAATGTTG+GGG 0.729255 8_1:-61842284 Msa1205490:CDS
AGCACATTATGAGCCCAAGG+AGG 0.756620 8_1:-61842245 Msa1205490:CDS
TCGTCAGGGAAATATCTGTG+AGG 0.770882 8_1:-61838483 Msa1205490:exon
CTATCATTGACTATGCAACG+GGG 0.777249 8_1:+61841466 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTATTTTTTTGC+AGG - chr8_1:61840430-61840449 Msa1205490:intron 10.0%
!! ATAAATTTAGTAAAAGAAAG+AGG + chr8_1:61840603-61840622 None:intergenic 15.0%
!! AATGTAAAATCAAAATAGAA+AGG - chr8_1:61840978-61840997 Msa1205490:intron 15.0%
!! TATTATATATATTAGAAGAG+TGG - chr8_1:61841566-61841585 Msa1205490:intron 15.0%
!!! ACACATTTTAATAGAAAAAA+AGG + chr8_1:61842618-61842637 None:intergenic 15.0%
!!! TAAATTTTATATCACTTCAT+AGG - chr8_1:61842826-61842845 Msa1205490:CDS 15.0%
!!! TCATTTATAGATAATGTTTT+AGG - chr8_1:61843267-61843286 Msa1205490:CDS 15.0%
!!! AAGCTTAATTTTGAATTTGT+AGG - chr8_1:61839937-61839956 Msa1205490:intron 20.0%
!!! ACAGATGAAATTTATGATTT+TGG - chr8_1:61840208-61840227 Msa1205490:intron 20.0%
!!! TTTTTAAGTTTCTGTAGTTA+TGG - chr8_1:61840335-61840354 Msa1205490:intron 20.0%
!! ATTAAAACAAAATGTTTCAG+TGG + chr8_1:61840800-61840819 None:intergenic 20.0%
!!! TTAAAGTTGTATTTTTCTGT+AGG + chr8_1:61841198-61841217 None:intergenic 20.0%
!! CAGAAAAATACAACTTTAAA+AGG - chr8_1:61841199-61841218 Msa1205490:intron 20.0%
!! ATTTAAGAAAATGTGATAAG+CGG - chr8_1:61841706-61841725 Msa1205490:intron 20.0%
!! TTCTAATATTGAGTTTCATA+TGG - chr8_1:61841815-61841834 Msa1205490:intron 20.0%
!! ATGTTTCGTAATGAATTTAT+TGG - chr8_1:61842149-61842168 Msa1205490:CDS 20.0%
!! TGTAAAACAAAAGATACAAA+AGG + chr8_1:61842408-61842427 None:intergenic 20.0%
!! AAAGACAACATAATTATTTG+AGG + chr8_1:61842650-61842669 None:intergenic 20.0%
!!! TCTAGATTATTTCTTAAATC+TGG - chr8_1:61842852-61842871 Msa1205490:CDS 20.0%
!!! CTAGATTATTTCTTAAATCT+GGG - chr8_1:61842853-61842872 Msa1205490:CDS 20.0%
!!! TTTTGCAATAATCAAGAAAT+CGG + chr8_1:61842889-61842908 None:intergenic 20.0%
!!! TTTGTTTGGTTTTTGTAAAT+TGG - chr8_1:61843154-61843173 Msa1205490:CDS 20.0%
!! TATAATAACTGCAAAAAAGA+TGG + chr8_1:61843788-61843807 None:intergenic 20.0%
!!! GATGTAGTAATTTTGTTTTC+CGG + chr8_1:61838067-61838086 None:intergenic 25.0%
! ATTTACAATATTACCCTTAC+CGG + chr8_1:61838487-61838506 None:intergenic 25.0%
!!! TACTTCACTTTTGTCAATTT+TGG - chr8_1:61839986-61840005 Msa1205490:intron 25.0%
!! ACTTAGCAAAAAGTATACAA+TGG + chr8_1:61840134-61840153 None:intergenic 25.0%
! ATAGTCAATGATAGAGTTAA+AGG - chr8_1:61840497-61840516 Msa1205490:intron 25.0%
! AACAACACTACTATAGAAAT+TGG + chr8_1:61840685-61840704 None:intergenic 25.0%
! ATTGAAAACTCAAATTTGGT+CGG + chr8_1:61841019-61841038 None:intergenic 25.0%
! TGAGATTGAAAACTCAAATT+TGG + chr8_1:61841023-61841042 None:intergenic 25.0%
! TAACTACTATTCATTTCTGT+GGG + chr8_1:61841355-61841374 None:intergenic 25.0%
! TTAACTACTATTCATTTCTG+TGG + chr8_1:61841356-61841375 None:intergenic 25.0%
! ATAACCGTTTATTTGCATAT+AGG + chr8_1:61841688-61841707 None:intergenic 25.0%
! AAACAAACACATCCAAAATT+TGG + chr8_1:61842539-61842558 None:intergenic 25.0%
!!! AAGAACTGTCTTTTAAAGAA+AGG + chr8_1:61842780-61842799 None:intergenic 25.0%
!!! GTTTGTTTGGTTCTTTTAAT+TGG - chr8_1:61843020-61843039 Msa1205490:CDS 25.0%
!! TTTATATTCATGGGTTTGTT+TGG - chr8_1:61843140-61843159 Msa1205490:CDS 25.0%
!! TTTTTCTTTCTTTCTTCCTT+TGG - chr8_1:61843863-61843882 Msa1205490:exon 25.0%
!! ATATACACCAACATTTTACT+TGG + chr8_1:61843894-61843913 None:intergenic 25.0%
! AGTAAAATGTTGGTGTATAT+TGG - chr8_1:61843894-61843913 Msa1205490:five_prime_UTR 25.0%
TTTCTGTTACGTTAGATCTT+CGG - chr8_1:61838224-61838243 Msa1205490:three_prime_UTR 30.0%
!! ACCAGAAATAGCTTTAAAAG+CGG + chr8_1:61838364-61838383 None:intergenic 30.0%
! TAATAGTTCTGTTCCGAAAA+CGG - chr8_1:61838398-61838417 Msa1205490:three_prime_UTR 30.0%
! TCTAACTGAATAACCGTTTT+CGG + chr8_1:61838414-61838433 None:intergenic 30.0%
GGTAAGGGTAATATTGTAAA+TGG - chr8_1:61838486-61838505 Msa1205490:CDS 30.0%
AATGTTCATAATGAGCTTCA+GGG - chr8_1:61839011-61839030 Msa1205490:intron 30.0%
AGAGAAAGAAGAAAAGTCTA+AGG - chr8_1:61839430-61839449 Msa1205490:intron 30.0%
ACGTGTATGTTATGAATGTT+GGG - chr8_1:61839669-61839688 Msa1205490:CDS 30.0%
TAAGCTTACTTCTTTAATGC+TGG + chr8_1:61839924-61839943 None:intergenic 30.0%
AAGCATTTCAGTTCACAAAA+AGG + chr8_1:61839963-61839982 None:intergenic 30.0%
TGCATATACCAACTCAATTA+TGG + chr8_1:61840109-61840128 None:intergenic 30.0%
TCATAAATTTCATCTGTAGC+TGG + chr8_1:61840205-61840224 None:intergenic 30.0%
! TGGAATATACAGTATTGAGA+TGG - chr8_1:61840228-61840247 Msa1205490:intron 30.0%
TTTGTAGTGATACATTCAAC+AGG - chr8_1:61840256-61840275 Msa1205490:intron 30.0%
!! TGTTATTTCTATCTGAAGGA+AGG + chr8_1:61840660-61840679 None:intergenic 30.0%
!! GGTATGTTATTTCTATCTGA+AGG + chr8_1:61840664-61840683 None:intergenic 30.0%
ACAGATAATCAACACAAACT+CGG + chr8_1:61840738-61840757 None:intergenic 30.0%
!! TGTGTTGATTATCTGTTTGA+TGG - chr8_1:61840742-61840761 Msa1205490:intron 30.0%
TATCTGTTTGATGGAAATCA+AGG - chr8_1:61840751-61840770 Msa1205490:intron 30.0%
! GATTTTACATTCCTTTTCTC+TGG + chr8_1:61840969-61840988 None:intergenic 30.0%
TTAAGGAAAAAGAGTTCATC+TGG - chr8_1:61841157-61841176 Msa1205490:intron 30.0%
! GTTGTATTTTTCTGTAGGTT+GGG + chr8_1:61841193-61841212 None:intergenic 30.0%
! AGTTGTATTTTTCTGTAGGT+TGG + chr8_1:61841194-61841213 None:intergenic 30.0%
! TTCATTTTCGTAAAAGCCTA+AGG + chr8_1:61841254-61841273 None:intergenic 30.0%
AACTACTATTCATTTCTGTG+GGG + chr8_1:61841354-61841373 None:intergenic 30.0%
!! TATTCCCACTTAGTTTGTTA+AGG - chr8_1:61841440-61841459 Msa1205490:CDS 30.0%
AGTGCCTATATGCAAATAAA+CGG - chr8_1:61841681-61841700 Msa1205490:intron 30.0%
ACAAATCTTGTCTAACATGA+TGG - chr8_1:61842078-61842097 Msa1205490:CDS 30.0%
ATTACGAAACATTTCCAGTA+CGG + chr8_1:61842141-61842160 None:intergenic 30.0%
CAGCTCTTCAATTAAATGTT+GGG + chr8_1:61842342-61842361 None:intergenic 30.0%
!! GACATACACAATTTGTTGAA+TGG - chr8_1:61842437-61842456 Msa1205490:CDS 30.0%
! TGTATCATTGTGCCAAATTT+TGG - chr8_1:61842524-61842543 Msa1205490:CDS 30.0%
TAATAGAAAAAAAGGCCACA+GGG + chr8_1:61842610-61842629 None:intergenic 30.0%
TTAATAGAAAAAAAGGCCAC+AGG + chr8_1:61842611-61842630 None:intergenic 30.0%
ACAAAAAAGAAAACAAGGGT+GGG + chr8_1:61842912-61842931 None:intergenic 30.0%
TACAAAAAAGAAAACAAGGG+TGG + chr8_1:61842913-61842932 None:intergenic 30.0%
!! TTTGTATCCATTGGTTTGTT+TGG - chr8_1:61843007-61843026 Msa1205490:CDS 30.0%
AAAAGAACCAAACAAACCAA+TGG + chr8_1:61843017-61843036 None:intergenic 30.0%
TTCGTCTGCATTTATATTCA+TGG - chr8_1:61843130-61843149 Msa1205490:CDS 30.0%
TCGTCTGCATTTATATTCAT+GGG - chr8_1:61843131-61843150 Msa1205490:CDS 30.0%
! CTAACTTTTCATTCTGTCTT+AGG - chr8_1:61843198-61843217 Msa1205490:CDS 30.0%
! TTTTCATTCTGTCTTAGGAT+GGG - chr8_1:61843203-61843222 Msa1205490:CDS 30.0%
ATTAGAGAATTCTGTAAGAG+TGG - chr8_1:61843318-61843337 Msa1205490:CDS 30.0%
!! AATGGATTTTCATGAATTGC+TGG - chr8_1:61843368-61843387 Msa1205490:CDS 30.0%
! TCATGATGATGTTACTGTTA+TGG - chr8_1:61843419-61843438 Msa1205490:CDS 30.0%
AAGCTATGACATCATCTTTA+GGG + chr8_1:61843553-61843572 None:intergenic 30.0%
AATTCCAGATCCATGAAAAA+TGG + chr8_1:61843584-61843603 None:intergenic 30.0%
CAACAAAAAAGTTAACTCCT+AGG - chr8_1:61843616-61843635 Msa1205490:CDS 30.0%
! CATTAAAATCTGAGATTCCT+AGG + chr8_1:61843636-61843655 None:intergenic 30.0%
! CTAGGAATCTCAGATTTTAA+TGG - chr8_1:61843634-61843653 Msa1205490:CDS 30.0%
! GGCTTATGGAAATTTTCTTT+AGG - chr8_1:61843699-61843718 Msa1205490:CDS 30.0%
ATAACTGCAAAAAAGATGGA+CGG + chr8_1:61843784-61843803 None:intergenic 30.0%
AAAATGTTGGTGTATATTGG+TGG - chr8_1:61843897-61843916 Msa1205490:five_prime_UTR 30.0%
AAATGTTGGTGTATATTGGT+GGG - chr8_1:61843898-61843917 Msa1205490:five_prime_UTR 30.0%
!! TACAAGTGTACTGATTTAAC+TGG - chr8_1:61843923-61843942 Msa1205490:five_prime_UTR 30.0%
CTAACTCTAATTTGATATGG+TGG + chr8_1:61843997-61844016 None:intergenic 30.0%
CACCATATCAAATTAGAGTT+AGG - chr8_1:61843995-61844014 Msa1205490:five_prime_UTR 30.0%
CTCCTAACTCTAATTTGATA+TGG + chr8_1:61844000-61844019 None:intergenic 30.0%
TAGAGTTAGGAGATTCAAAA+TGG - chr8_1:61844008-61844027 Msa1205490:five_prime_UTR 30.0%
TTACTACATCCCTAATGTGA+TGG - chr8_1:61838077-61838096 Msa1205490:three_prime_UTR 35.0%
TACTACATCCCTAATGTGAT+GGG - chr8_1:61838078-61838097 Msa1205490:three_prime_UTR 35.0%
!!! TGTCGGTTTTTTTGTTGTTC+CGG + chr8_1:61838149-61838168 None:intergenic 35.0%
AATAGTAACGTCTTGGTTGT+CGG + chr8_1:61838166-61838185 None:intergenic 35.0%
CAGTGAAAATAGTAACGTCT+TGG + chr8_1:61838173-61838192 None:intergenic 35.0%
GTAACAGAAAGAATGACCTA+GGG + chr8_1:61838214-61838233 None:intergenic 35.0%
! GTTTTCACCTACTCATGAAT+CGG - chr8_1:61838308-61838327 Msa1205490:three_prime_UTR 35.0%
AAAAGCGGTTTCACGAAAAT+CGG + chr8_1:61838349-61838368 None:intergenic 35.0%
!!! ACCGCTTTTAAAGCTATTTC+TGG - chr8_1:61838360-61838379 Msa1205490:three_prime_UTR 35.0%
AAAATGAGAGTAATGTGCAG+TGG - chr8_1:61838856-61838875 Msa1205490:intron 35.0%
AAATGAGAGTAATGTGCAGT+GGG - chr8_1:61838857-61838876 Msa1205490:intron 35.0%
! TTGTTTGTTGGGATTTACGA+CGG - chr8_1:61838939-61838958 Msa1205490:intron 35.0%
GAAGCTCATTATGAACATTG+CGG + chr8_1:61839010-61839029 None:intergenic 35.0%
CAATGTTCATAATGAGCTTC+AGG - chr8_1:61839010-61839029 Msa1205490:intron 35.0%
! AGAAAATTCAGGTTCTGGTT+TGG - chr8_1:61839097-61839116 Msa1205490:intron 35.0%
ATGGTACAACAGACTGAAAT+TGG - chr8_1:61839125-61839144 Msa1205490:intron 35.0%
! AAGATGGACTTGATCTTTCT+GGG - chr8_1:61839210-61839229 Msa1205490:intron 35.0%
! TGATGGTTTGCCAAAACATA+AGG - chr8_1:61839361-61839380 Msa1205490:intron 35.0%
AAGTTGTTACCGTGGAATTT+GGG - chr8_1:61839398-61839417 Msa1205490:intron 35.0%
GAAAGAAGAAAAGTCTAAGG+TGG - chr8_1:61839433-61839452 Msa1205490:intron 35.0%
AAAACCAAATCATGATCCAC+CGG + chr8_1:61839518-61839537 None:intergenic 35.0%
ACTTGCGTATTTGGATATGA+CGG - chr8_1:61839571-61839590 Msa1205490:intron 35.0%
! AAATCCTGAACTTGCTTTGA+TGG - chr8_1:61839610-61839629 Msa1205490:CDS 35.0%
! AATCCTGAACTTGCTTTGAT+GGG - chr8_1:61839611-61839630 Msa1205490:CDS 35.0%
!!! TCTGTTGGTTGTTTTGATGA+GGG - chr8_1:61839640-61839659 Msa1205490:CDS 35.0%
GACGTGTATGTTATGAATGT+TGG - chr8_1:61839668-61839687 Msa1205490:CDS 35.0%
CGTGTATGTTATGAATGTTG+GGG - chr8_1:61839670-61839689 Msa1205490:CDS 35.0%
! TTGAGTTCCATCTAAAGCAA+AGG + chr8_1:61839816-61839835 None:intergenic 35.0%
TCAAACTGAAACCACAATCA+AGG - chr8_1:61839832-61839851 Msa1205490:CDS 35.0%
AGGCAACAATTGAAATGATG+AGG + chr8_1:61840035-61840054 None:intergenic 35.0%
TCATCATTTCAATTGTTGCC+TGG - chr8_1:61840034-61840053 Msa1205490:intron 35.0%
CAAACTCAAGAAGTTAAACC+AGG + chr8_1:61840055-61840074 None:intergenic 35.0%
TAAACAGTTCACAACATGAC+AGG + chr8_1:61840384-61840403 None:intergenic 35.0%
! TCTATCATTGACTATGCAAC+GGG + chr8_1:61840492-61840511 None:intergenic 35.0%
! CTCTATCATTGACTATGCAA+CGG + chr8_1:61840493-61840512 None:intergenic 35.0%
TAGAGTTAAAGGTCGTCTTA+AGG - chr8_1:61840508-61840527 Msa1205490:intron 35.0%
ATTTGAATAAAACGTGCACC+TGG - chr8_1:61840818-61840837 Msa1205490:intron 35.0%
! TACATTCCTTTTCTCTGGTT+TGG + chr8_1:61840964-61840983 None:intergenic 35.0%
GAAGTGGTATGTAAGACATT+GGG + chr8_1:61841121-61841140 None:intergenic 35.0%
AGAAGTGGTATGTAAGACAT+TGG + chr8_1:61841122-61841141 None:intergenic 35.0%
TCTTACATACCACTTCTGTT+AGG - chr8_1:61841125-61841144 Msa1205490:intron 35.0%
! TAAAAGCCTAAGGTACTCAA+AGG + chr8_1:61841244-61841263 None:intergenic 35.0%
CAAGCCTTAACAAACTAAGT+GGG + chr8_1:61841447-61841466 None:intergenic 35.0%
TTCTCAGTCAGAATTGAAAG+AGG - chr8_1:61841920-61841939 Msa1205490:intron 35.0%
TGATTATGAAGTCATGTGAC+AGG + chr8_1:61841958-61841977 None:intergenic 35.0%
TTCATGGAAAAGTTTCCAGA+CGG - chr8_1:61842308-61842327 Msa1205490:CDS 35.0%
TCTTCAATTAAATGTTGGGC+AGG + chr8_1:61842338-61842357 None:intergenic 35.0%
GCAGCTCTTCAATTAAATGT+TGG + chr8_1:61842343-61842362 None:intergenic 35.0%
ATCCAATTTACCAGCTTTCT+TGG + chr8_1:61842378-61842397 None:intergenic 35.0%
ACAGTGAAAGAATAAACTGC+TGG - chr8_1:61842572-61842591 Msa1205490:CDS 35.0%
! CATAATTATTTGAGGCTCTG+AGG + chr8_1:61842642-61842661 None:intergenic 35.0%
!!! TTGATTCTAGAGTTTTGCTG+AGG - chr8_1:61842944-61842963 Msa1205490:CDS 35.0%
TGAGGTGACAGTGTTAATTT+GGG - chr8_1:61842962-61842981 Msa1205490:CDS 35.0%
TTGTCTGCATTTGTATCCAT+TGG - chr8_1:61842998-61843017 Msa1205490:CDS 35.0%
! CTTTTCATTTTGCCTGAGTT+TGG - chr8_1:61843070-61843089 Msa1205490:CDS 35.0%
!! CAAGTTAAAAAGTGCCATCT+CGG + chr8_1:61843096-61843115 None:intergenic 35.0%
!!! GAGATGGCACTTTTTAACTT+GGG - chr8_1:61843095-61843114 Msa1205490:CDS 35.0%
! CTTTTCATTCTGTCTTAGGA+TGG - chr8_1:61843202-61843221 Msa1205490:CDS 35.0%
TTTCATTCTGTCTTAGGATG+GGG - chr8_1:61843204-61843223 Msa1205490:CDS 35.0%
GTTATGGTGATATCACTTGA+AGG - chr8_1:61843435-61843454 Msa1205490:CDS 35.0%
TATCACTTGAAGGAAGAATC+TGG - chr8_1:61843445-61843464 Msa1205490:CDS 35.0%
! TGACAACAATTTTTCCACCT+GGG - chr8_1:61843523-61843542 Msa1205490:CDS 35.0%
GAAGCTATGACATCATCTTT+AGG + chr8_1:61843554-61843573 None:intergenic 35.0%
!! TTCAGCTGATCCATTTTTCA+TGG - chr8_1:61843571-61843590 Msa1205490:CDS 35.0%
!! TGATCCATTTTTCATGGATC+TGG - chr8_1:61843577-61843596 Msa1205490:CDS 35.0%
!!! AACTTTTTTGTTGCAACACC+AGG + chr8_1:61843609-61843628 None:intergenic 35.0%
!! TCTCAGATTTTAATGGCAAG+AGG - chr8_1:61843641-61843660 Msa1205490:CDS 35.0%
! ATGGAAATTTTCTTTAGGCG+TGG - chr8_1:61843704-61843723 Msa1205490:CDS 35.0%
TAACTGCAAAAAAGATGGAC+GGG + chr8_1:61843783-61843802 None:intergenic 35.0%
! ATAGAAATTTTGCACAGCGA+AGG - chr8_1:61843819-61843838 Msa1205490:CDS 35.0%
AATGTTGGTGTATATTGGTG+GGG - chr8_1:61843899-61843918 Msa1205490:five_prime_UTR 35.0%
GAAATATGACAATCTGTAGC+CGG - chr8_1:61843961-61843980 Msa1205490:five_prime_UTR 35.0%
AAATATGACAATCTGTAGCC+GGG - chr8_1:61843962-61843981 Msa1205490:five_prime_UTR 35.0%
TTAGGAGATTCAAAATGGAG+AGG - chr8_1:61844013-61844032 Msa1205490:five_prime_UTR 35.0%
AGGGAAGAAGAGTGAAGTAA+GGG + chr8_1:61837987-61838006 None:intergenic 40.0%
! GTTGTGTTCTTGTTTCGAAC+CGG - chr8_1:61838116-61838135 Msa1205490:three_prime_UTR 40.0%
TGACCTAGGGTTTCATCTAA+CGG + chr8_1:61838201-61838220 None:intergenic 40.0%
CGTAACAGAAAGAATGACCT+AGG + chr8_1:61838215-61838234 None:intergenic 40.0%
AACCGAAGAGAAGTAGATTC+CGG + chr8_1:61838291-61838310 None:intergenic 40.0%
! CTAAGAACCGATTCATGAGT+AGG + chr8_1:61838318-61838337 None:intergenic 40.0%
AAAGCGGTTTCACGAAAATC+GGG + chr8_1:61838348-61838367 None:intergenic 40.0%
TCAAAAAACTCACCACCTCT+CGG + chr8_1:61838558-61838577 None:intergenic 40.0%
!!! AGAGGTGGTGAGTTTTTTGA+GGG - chr8_1:61838558-61838577 Msa1205490:CDS 40.0%
!! GGTTTAGGAAGGCATTTCAA+CGG - chr8_1:61838736-61838755 Msa1205490:intron 40.0%
!! ATTTCAACGGAAGGTGTCTT+CGG - chr8_1:61838749-61838768 Msa1205490:intron 40.0%
!! TGCCGGTGTTGAATTTTGTT+GGG - chr8_1:61838793-61838812 Msa1205490:intron 40.0%
CTCCCAACAAAATTCAACAC+CGG + chr8_1:61838798-61838817 None:intergenic 40.0%
! GAATTTTGTTGGGAGGAAAG+AGG - chr8_1:61838803-61838822 Msa1205490:intron 40.0%
!! GGGATTTACGACGGTTTTAA+TGG - chr8_1:61838948-61838967 Msa1205490:intron 40.0%
!! TTACGACGGTTTTAATGGAC+CGG - chr8_1:61838953-61838972 Msa1205490:intron 40.0%
ATCAAAAACTCAGGTGCATC+CGG + chr8_1:61838975-61838994 None:intergenic 40.0%
! GATGCACCTGAGTTTTTGAT+GGG - chr8_1:61838975-61838994 Msa1205490:intron 40.0%
! ATGCACCTGAGTTTTTGATG+GGG - chr8_1:61838976-61838995 Msa1205490:intron 40.0%
ATATGCCCCATCAAAAACTC+AGG + chr8_1:61838984-61839003 None:intergenic 40.0%
!! ATGAGCTTCAGGGTTTGTTT+TGG - chr8_1:61839021-61839040 Msa1205490:intron 40.0%
!! TGAGCTTCAGGGTTTGTTTT+GGG - chr8_1:61839022-61839041 Msa1205490:intron 40.0%
TTGGGAACTTGATGAACCAA+TGG - chr8_1:61839040-61839059 Msa1205490:intron 40.0%
GAAAAGGAGGGAGAAAATTC+AGG - chr8_1:61839086-61839105 Msa1205490:intron 40.0%
!! AGGTTCTGGTTTGGTGAATA+TGG - chr8_1:61839106-61839125 Msa1205490:intron 40.0%
ACAACAGACTGAAATTGGAC+CGG - chr8_1:61839130-61839149 Msa1205490:intron 40.0%
GAAAGATCAAGTCCATCTTC+AGG + chr8_1:61839209-61839228 None:intergenic 40.0%
! GAAGATGGACTTGATCTTTC+TGG - chr8_1:61839209-61839228 Msa1205490:intron 40.0%
GAACGGTTTGTCAAAGCATA+AGG - chr8_1:61839334-61839353 Msa1205490:intron 40.0%
GGTTTGTCAAAGCATAAGGA+GGG - chr8_1:61839338-61839357 Msa1205490:intron 40.0%
! TGGTTTGCCAAAACATAAGG+AGG - chr8_1:61839364-61839383 Msa1205490:intron 40.0%
GGTTTGCCAAAACATAAGGA+GGG - chr8_1:61839365-61839384 Msa1205490:intron 40.0%
! CCATTACCCTCCTTATGTTT+TGG + chr8_1:61839374-61839393 None:intergenic 40.0%
CCAAAACATAAGGAGGGTAA+TGG - chr8_1:61839371-61839390 Msa1205490:intron 40.0%
! AACATAAGGAGGGTAATGGT+AGG - chr8_1:61839375-61839394 Msa1205490:intron 40.0%
GAAGTTGTTACCGTGGAATT+TGG - chr8_1:61839397-61839416 Msa1205490:intron 40.0%
AGTTGTTACCGTGGAATTTG+GGG - chr8_1:61839399-61839418 Msa1205490:intron 40.0%
!!! TGGTTTTGAATGCAATGTCG+CGG - chr8_1:61839531-61839550 Msa1205490:intron 40.0%
AGTGACAGAACTTGCGTATT+TGG - chr8_1:61839562-61839581 Msa1205490:intron 40.0%
!! TTTGATGGGTTCATGTCTGT+TGG - chr8_1:61839625-61839644 Msa1205490:CDS 40.0%
!!! GTCTGTTGGTTGTTTTGATG+AGG - chr8_1:61839639-61839658 Msa1205490:CDS 40.0%
AATGTGGAATCTGCAAGCAA+GGG - chr8_1:61839746-61839765 Msa1205490:CDS 40.0%
! GAAGAGTCCTTTGCTTTAGA+TGG - chr8_1:61839806-61839825 Msa1205490:CDS 40.0%
ACTGAAACCACAATCAAGGT+CGG - chr8_1:61839836-61839855 Msa1205490:intron 40.0%
TTCTGCTCAAGAAATGAGGT+TGG - chr8_1:61839868-61839887 Msa1205490:intron 40.0%
GTGTGTGTCCATAATTGAGT+TGG - chr8_1:61840098-61840117 Msa1205490:intron 40.0%
GCTAAGTGCATTGTATTCCT+AGG - chr8_1:61840147-61840166 Msa1205490:intron 40.0%
AAGTGCATTGTATTCCTAGG+AGG - chr8_1:61840150-61840169 Msa1205490:intron 40.0%
AGTGCATTGTATTCCTAGGA+GGG - chr8_1:61840151-61840170 Msa1205490:intron 40.0%
! CTATCATTGACTATGCAACG+GGG + chr8_1:61840491-61840510 None:intergenic 40.0%
! TTAAGGTCACCAGAGCATTT+GGG - chr8_1:61840525-61840544 Msa1205490:intron 40.0%
TATCTGAAGGAAGGAGAGAA+TGG + chr8_1:61840651-61840670 None:intergenic 40.0%
AAGATTGCTGGAATAGAGAG+AGG + chr8_1:61841068-61841087 None:intergenic 40.0%
CTGTTAGGTCTACTAGGTTA+AGG - chr8_1:61841140-61841159 Msa1205490:intron 40.0%
CCAAGCCTTAACAAACTAAG+TGG + chr8_1:61841448-61841467 None:intergenic 40.0%
!! CCACTTAGTTTGTTAAGGCT+TGG - chr8_1:61841445-61841464 Msa1205490:CDS 40.0%
TCTGACTGAGAATGCAAAAG+AGG + chr8_1:61841912-61841931 None:intergenic 40.0%
AGTACGGCATCATTCAACTT+CGG + chr8_1:61842125-61842144 None:intergenic 40.0%
AAGGGAAGCAGGATATGTAT+GGG + chr8_1:61842181-61842200 None:intergenic 40.0%
! ATCTATGGTGACGTACTGAA+GGG + chr8_1:61842199-61842218 None:intergenic 40.0%
! AATCTATGGTGACGTACTGA+AGG + chr8_1:61842200-61842219 None:intergenic 40.0%
TCACCATAGATTAAGCCCAA+GGG - chr8_1:61842208-61842227 Msa1205490:CDS 40.0%
GATACAAACCATCAGATGAG+AGG + chr8_1:61842247-61842266 None:intergenic 40.0%
!! TTCTCAAGTTGAGAGCTTCA+TGG - chr8_1:61842292-61842311 Msa1205490:CDS 40.0%
AGCCAAGAAAGCTGGTAAAT+TGG - chr8_1:61842373-61842392 Msa1205490:CDS 40.0%
!! CACAATTTGTTGAATGGTGC+AGG - chr8_1:61842443-61842462 Msa1205490:CDS 40.0%
!! AATTTGTTGAATGGTGCAGG+TGG - chr8_1:61842446-61842465 Msa1205490:CDS 40.0%
GCTACAAATAATCAAAGCGC+TGG + chr8_1:61842730-61842749 None:intergenic 40.0%
CTGAGGTGACAGTGTTAATT+TGG - chr8_1:61842961-61842980 Msa1205490:CDS 40.0%
! GTGACAGTGTTAATTTGGGA+TGG - chr8_1:61842966-61842985 Msa1205490:CDS 40.0%
!! CGAGATGGCACTTTTTAACT+TGG - chr8_1:61843094-61843113 Msa1205490:CDS 40.0%
!!! TGGCACTTTTTAACTTGGGA+TGG - chr8_1:61843099-61843118 Msa1205490:CDS 40.0%
ATGACAGACTCAATTGTTGC+AGG - chr8_1:61843345-61843364 Msa1205490:CDS 40.0%
AGACTCAATTGTTGCAGGAA+TGG - chr8_1:61843350-61843369 Msa1205490:CDS 40.0%
GAAGAATCTGGAAATCGTCA+GGG - chr8_1:61843457-61843476 Msa1205490:CDS 40.0%
! GTGACAACAATTTTTCCACC+TGG - chr8_1:61843522-61843541 Msa1205490:CDS 40.0%
!! TCATGGATCTGGAATTTTCC+TGG - chr8_1:61843588-61843607 Msa1205490:CDS 40.0%
! ATTTTACTTGGCTCAGCCAA+AGG + chr8_1:61843882-61843901 None:intergenic 40.0%
AATATGACAATCTGTAGCCG+GGG - chr8_1:61843963-61843982 Msa1205490:five_prime_UTR 40.0%
GAGGGAAGAAGAGTGAAGTA+AGG + chr8_1:61837988-61838007 None:intergenic 45.0%
TCCAATCCGAAAGGGACAAA+GGG + chr8_1:61838020-61838039 None:intergenic 45.0%
! TTGTTGTTCCGGTGTTGAAC+CGG + chr8_1:61838138-61838157 None:intergenic 45.0%
GAACCGTTAGATGAAACCCT+AGG - chr8_1:61838195-61838214 Msa1205490:three_prime_UTR 45.0%
CACCGGAATCTACTTCTCTT+CGG - chr8_1:61838286-61838305 Msa1205490:three_prime_UTR 45.0%
!!! GAGAGGTGGTGAGTTTTTTG+AGG - chr8_1:61838557-61838576 Msa1205490:CDS 45.0%
!!! GAGGTGGTGAGTTTTTTGAG+GGG - chr8_1:61838559-61838578 Msa1205490:CDS 45.0%
!! GGGAGTGGTTATTTTCTCTC+CGG - chr8_1:61838579-61838598 Msa1205490:CDS 45.0%
CGGAAGAGATGTTCCATTCT+CGG - chr8_1:61838671-61838690 Msa1205490:intron 45.0%
CTTCCATACATCCCTCCTAA+CGG + chr8_1:61838699-61838718 None:intergenic 45.0%
GGGATGTATGGAAGGAAGAA+AGG - chr8_1:61838705-61838724 Msa1205490:intron 45.0%
! GAAGGAAGAAAGGTGTGTCA+GGG - chr8_1:61838715-61838734 Msa1205490:intron 45.0%
! AGAAAGGTGTGTCAGGGTTT+AGG - chr8_1:61838721-61838740 Msa1205490:intron 45.0%
!! TAGGAAGGCATTTCAACGGA+AGG - chr8_1:61838740-61838759 Msa1205490:intron 45.0%
!! GTGCCGGTGTTGAATTTTGT+TGG - chr8_1:61838792-61838811 Msa1205490:intron 45.0%
!! CGGTGTTGAATTTTGTTGGG+AGG - chr8_1:61838796-61838815 Msa1205490:intron 45.0%
! GGATGCACCTGAGTTTTTGA+TGG - chr8_1:61838974-61838993 Msa1205490:intron 45.0%
! GAGGGAGAAAATTCAGGTTC+TGG - chr8_1:61839092-61839111 Msa1205490:intron 45.0%
! GCGTAGGTTGTGGGAATTTT+TGG - chr8_1:61839175-61839194 Msa1205490:intron 45.0%
TTGGCTGAAGATCCTGAAGA+TGG - chr8_1:61839194-61839213 Msa1205490:intron 45.0%
TGGACTTGATCTTTCTGGGT+CGG - chr8_1:61839214-61839233 Msa1205490:intron 45.0%
TTGATCTTTCTGGGTCGGAT+AGG - chr8_1:61839219-61839238 Msa1205490:intron 45.0%
AGTGTTAGCAATGCCAATGC+AGG - chr8_1:61839269-61839288 Msa1205490:intron 45.0%
TAGCAATGCCAATGCAGGTT+CGG - chr8_1:61839274-61839293 Msa1205490:intron 45.0%
TTGCTGTCCAGACTGAAGAA+CGG - chr8_1:61839317-61839336 Msa1205490:intron 45.0%
TGACAAACCGTTCTTCAGTC+TGG + chr8_1:61839327-61839346 None:intergenic 45.0%
CGGTTTGTCAAAGCATAAGG+AGG - chr8_1:61839337-61839356 Msa1205490:intron 45.0%
TCAAAGCATAAGGAGGGTGA+TGG - chr8_1:61839344-61839363 Msa1205490:intron 45.0%
ATGGTAGGAAGTTGTTACCG+TGG - chr8_1:61839390-61839409 Msa1205490:intron 45.0%
TCCTGATTCCCCAAATTCCA+CGG + chr8_1:61839410-61839429 None:intergenic 45.0%
GAAAACAAACCCTCTGCTTC+TGG - chr8_1:61839455-61839474 Msa1205490:intron 45.0%
!!! GGTTTTGAATGCAATGTCGC+GGG - chr8_1:61839532-61839551 Msa1205490:intron 45.0%
! GGATATGACGGAAAAGCTTC+TGG - chr8_1:61839583-61839602 Msa1205490:intron 45.0%
GAACCCATCAAAGCAAGTTC+AGG + chr8_1:61839617-61839636 None:intergenic 45.0%
!!! GGTTGTTTTGATGAGGGATG+AGG - chr8_1:61839646-61839665 Msa1205490:CDS 45.0%
TGTAGCACATTATGAGCCCA+AGG - chr8_1:61839706-61839725 Msa1205490:CDS 45.0%
CTTGCTTGCAGATTCCACAT+TGG + chr8_1:61839747-61839766 None:intergenic 45.0%
CAATGTGGAATCTGCAAGCA+AGG - chr8_1:61839745-61839764 Msa1205490:CDS 45.0%
TTCAACTATGCTCTCACTGC+TGG + chr8_1:61839789-61839808 None:intergenic 45.0%
ACAATCAAGGTCGGCAATGA+GGG - chr8_1:61839845-61839864 Msa1205490:intron 45.0%
AGGGTTCTGCTCAAGAAATG+AGG - chr8_1:61839864-61839883 Msa1205490:intron 45.0%
TGCTCAAGAAATGAGGTTGG+CGG - chr8_1:61839871-61839890 Msa1205490:intron 45.0%
! CTTCTTTAATGCTGGTGCTG+TGG + chr8_1:61839916-61839935 None:intergenic 45.0%
GTAACAATAGCTTCCCTCCT+AGG + chr8_1:61840167-61840186 None:intergenic 45.0%
! CTTAAGGTCACCAGAGCATT+TGG - chr8_1:61840524-61840543 Msa1205490:intron 45.0%
! TAAGGTCACCAGAGCATTTG+GGG - chr8_1:61840526-61840545 Msa1205490:intron 45.0%
! TTGGGGCAGGATCTTTGAAA+AGG - chr8_1:61840543-61840562 Msa1205490:intron 45.0%
! TGGGGCAGGATCTTTGAAAA+GGG - chr8_1:61840544-61840563 Msa1205490:intron 45.0%
GAAGGAAGGAGAGAATGGTT+CGG + chr8_1:61840646-61840665 None:intergenic 45.0%
GTTCATGACTTCATGCACTG+CGG - chr8_1:61840702-61840721 Msa1205490:intron 45.0%
TTCATGACTTCATGCACTGC+GGG - chr8_1:61840703-61840722 Msa1205490:intron 45.0%
CAGCACTATATTGCGATGCA+GGG + chr8_1:61840910-61840929 None:intergenic 45.0%
TCTGTGCCAAACCAGAGAAA+AGG - chr8_1:61840955-61840974 Msa1205490:intron 45.0%
CCTAGTAGACCTAACAGAAG+TGG + chr8_1:61841137-61841156 None:intergenic 45.0%
CCACTTCTGTTAGGTCTACT+AGG - chr8_1:61841134-61841153 Msa1205490:intron 45.0%
AGAGTTCATCTGGACTGCTA+AGG - chr8_1:61841167-61841186 Msa1205490:intron 45.0%
GTTGAGCCTTTGAGTACCTT+AGG - chr8_1:61841235-61841254 Msa1205490:intron 45.0%
! ACAGAGGTATAGCACATTGC+GGG + chr8_1:61841596-61841615 None:intergenic 45.0%
! GACAGAGGTATAGCACATTG+CGG + chr8_1:61841597-61841616 None:intergenic 45.0%
GCAATGTGCTATACCTCTGT+CGG - chr8_1:61841596-61841615 Msa1205490:intron 45.0%
!!! TGCTATACCTCTGTCGGTTT+TGG - chr8_1:61841602-61841621 Msa1205490:intron 45.0%
!!! GCTATACCTCTGTCGGTTTT+GGG - chr8_1:61841603-61841622 Msa1205490:intron 45.0%
!!! CTATACCTCTGTCGGTTTTG+GGG - chr8_1:61841604-61841623 Msa1205490:intron 45.0%
TACAATGCAGCTGTCAATCC+CGG + chr8_1:61841651-61841670 None:intergenic 45.0%
GAAGTTGAATGATGCCGTAC+TGG - chr8_1:61842124-61842143 Msa1205490:CDS 45.0%
AGGGAAGCAGGATATGTATG+GGG + chr8_1:61842180-61842199 None:intergenic 45.0%
GAAGGGAAGCAGGATATGTA+TGG + chr8_1:61842182-61842201 None:intergenic 45.0%
GTCACCATAGATTAAGCCCA+AGG - chr8_1:61842207-61842226 Msa1205490:CDS 45.0%
GATCCCTTGGGCTTAATCTA+TGG + chr8_1:61842214-61842233 None:intergenic 45.0%
TTCCTGATCCTCTCATCTGA+TGG - chr8_1:61842236-61842255 Msa1205490:CDS 45.0%
AACCATCAGATGAGAGGATC+AGG + chr8_1:61842241-61842260 None:intergenic 45.0%
TTGGCACAATGATACAGAGC+AGG + chr8_1:61842520-61842539 None:intergenic 45.0%
TTTCCATTCCCTTGAGCTTC+TGG - chr8_1:61842703-61842722 Msa1205490:CDS 45.0%
GAATTGCTGGATATTCCGCA+AGG - chr8_1:61843381-61843400 Msa1205490:CDS 45.0%
TGGATATTCCGCAAGGAGAT+CGG - chr8_1:61843388-61843407 Msa1205490:CDS 45.0%
GGAAGAATCTGGAAATCGTC+AGG - chr8_1:61843456-61843475 Msa1205490:CDS 45.0%
TCGTCAGGGAAATATCTGTG+AGG - chr8_1:61843471-61843490 Msa1205490:CDS 45.0%
! TGAGGCGTTCAACTTTCTGT+TGG - chr8_1:61843489-61843508 Msa1205490:CDS 45.0%
!! ATCATCTTTAGGGCAATCCC+AGG + chr8_1:61843543-61843562 None:intergenic 45.0%
GGCTGAGCCAAGTAAAATGT+TGG - chr8_1:61843884-61843903 Msa1205490:five_prime_UTR 45.0%
ATATGACAATCTGTAGCCGG+GGG - chr8_1:61843964-61843983 Msa1205490:five_prime_UTR 45.0%
!! TATATTATATTTATTTGATT+AGG + chr8_1:61841317-61841336 None:intergenic 5.0%
!! TATATTATATTTATTTGATT+AGG + chr8_1:61841317-61841336 None:intergenic 5.0%
!! AAAATTTAAAAAAAATAGAA+AGG + chr8_1:61843846-61843865 None:intergenic 5.0%
CCAATCCGAAAGGGACAAAG+GGG + chr8_1:61838019-61838038 None:intergenic 50.0%
GTCCAATCCGAAAGGGACAA+AGG + chr8_1:61838021-61838040 None:intergenic 50.0%
! GTCCCTTTCGGATTGGACTT+AGG - chr8_1:61838023-61838042 Msa1205490:three_prime_UTR 50.0%
CGCCTAAGTCCAATCCGAAA+GGG + chr8_1:61838028-61838047 None:intergenic 50.0%
! CCTTTCGGATTGGACTTAGG+CGG - chr8_1:61838026-61838045 Msa1205490:three_prime_UTR 50.0%
! ATCCCTAATGTGATGGGAGC+TGG - chr8_1:61838084-61838103 Msa1205490:three_prime_UTR 50.0%
CTCCAGCTCCCATCACATTA+GGG + chr8_1:61838089-61838108 None:intergenic 50.0%
ACTCCAGCTCCCATCACATT+AGG + chr8_1:61838090-61838109 None:intergenic 50.0%
! GTTTCGAACCGGTTCAACAC+CGG - chr8_1:61838127-61838146 Msa1205490:three_prime_UTR 50.0%
GTTACGTTAGATCTTCGGCC+AGG - chr8_1:61838229-61838248 Msa1205490:three_prime_UTR 50.0%
GTGAGTCGGAGAAAGAAACC+TGG + chr8_1:61838250-61838269 None:intergenic 50.0%
AGAAAGCGATCGGAGTGAGT+CGG + chr8_1:61838264-61838283 None:intergenic 50.0%
TTCCGGTGAGAGAAAGCGAT+CGG + chr8_1:61838274-61838293 None:intergenic 50.0%
GGTTTCACGAAAATCGGGTC+GGG + chr8_1:61838343-61838362 None:intergenic 50.0%
CGGTTTCACGAAAATCGGGT+CGG + chr8_1:61838344-61838363 None:intergenic 50.0%
!! TGTGGTGGCGATTTTGTCAC+CGG - chr8_1:61838465-61838484 Msa1205490:three_prime_UTR 50.0%
! TGGCGATTTTGTCACCGGTA+AGG - chr8_1:61838470-61838489 Msa1205490:exon 50.0%
! GGCGATTTTGTCACCGGTAA+GGG - chr8_1:61838471-61838490 Msa1205490:exon 50.0%
!!! GGTGAGTTTTTTGAGGGGAG+TGG - chr8_1:61838564-61838583 Msa1205490:CDS 50.0%
CGTTAGGAGGGATGTATGGA+AGG - chr8_1:61838697-61838716 Msa1205490:intron 50.0%
! GGAAGGAAGAAAGGTGTGTC+AGG - chr8_1:61838714-61838733 Msa1205490:intron 50.0%
AGGTGTGTCAGGGTTTAGGA+AGG - chr8_1:61838725-61838744 Msa1205490:intron 50.0%
AGGTGTCTTCGGAGAAGAAG+CGG - chr8_1:61838760-61838779 Msa1205490:intron 50.0%
TGTTGGGAGGAAAGAGGTTC+CGG - chr8_1:61838809-61838828 Msa1205490:intron 50.0%
AGTAATGTGCAGTGGGCGTT+AGG - chr8_1:61838864-61838883 Msa1205490:intron 50.0%
GTAATGTGCAGTGGGCGTTA+GGG - chr8_1:61838865-61838884 Msa1205490:intron 50.0%
TCGGGTTCATGTGGTGGTTT+CGG - chr8_1:61838902-61838921 Msa1205490:intron 50.0%
AGCAGGGGTGGTTGTTTGTT+GGG - chr8_1:61838928-61838947 Msa1205490:intron 50.0%
ACGGGGTTATGACTCTCCAT+TGG + chr8_1:61839059-61839078 None:intergenic 50.0%
TAACCCCGTTGAGGTGGAAA+AGG - chr8_1:61839070-61839089 Msa1205490:intron 50.0%
! TCCCTCCTTTTCCACCTCAA+CGG + chr8_1:61839078-61839097 None:intergenic 50.0%
ACTGAAATTGGACCGGCTGT+GGG - chr8_1:61839137-61839156 Msa1205490:intron 50.0%
CTGTGGGAACGGAGAGTAAA+CGG - chr8_1:61839153-61839172 Msa1205490:intron 50.0%
AGAGTAAACGGCGTAGGTTG+TGG - chr8_1:61839165-61839184 Msa1205490:intron 50.0%
GAGTAAACGGCGTAGGTTGT+GGG - chr8_1:61839166-61839185 Msa1205490:intron 50.0%
ACCGTGGAATTTGGGGAATC+AGG - chr8_1:61839406-61839425 Msa1205490:intron 50.0%
AGCACATTATGAGCCCAAGG+AGG - chr8_1:61839709-61839728 Msa1205490:CDS 50.0%
TTATGAGCCCAAGGAGGATC+AGG - chr8_1:61839715-61839734 Msa1205490:CDS 50.0%
TATGAGCCCAAGGAGGATCA+GGG - chr8_1:61839716-61839735 Msa1205490:CDS 50.0%
! GAAGTACCCTGATCCTCCTT+GGG + chr8_1:61839725-61839744 None:intergenic 50.0%
! GGATCAGGGTACTTCCAATG+TGG - chr8_1:61839730-61839749 Msa1205490:CDS 50.0%
AGCAAGGGAGATGTTCGTGT+TGG - chr8_1:61839761-61839780 Msa1205490:CDS 50.0%
CTCATTGCCGACCTTGATTG+TGG + chr8_1:61839846-61839865 None:intergenic 50.0%
CACAATCAAGGTCGGCAATG+AGG - chr8_1:61839844-61839863 Msa1205490:intron 50.0%
ACTATGCAACGGGGATCATC+AGG + chr8_1:61840482-61840501 None:intergenic 50.0%
ACGTGCACCTGGTCTAATAG+CGG - chr8_1:61840829-61840848 Msa1205490:intron 50.0%
GCAGCACTATATTGCGATGC+AGG + chr8_1:61840911-61840930 None:intergenic 50.0%
GCATCGCAATATAGTGCTGC+AGG - chr8_1:61840911-61840930 Msa1205490:intron 50.0%
CTGGAATAGAGAGAGGCAGT+GGG + chr8_1:61841061-61841080 None:intergenic 50.0%
TGCACAGCTGCAAAGATTGC+TGG + chr8_1:61841080-61841099 None:intergenic 50.0%
GCAATCTTTGCAGCTGTGCA+AGG - chr8_1:61841080-61841099 Msa1205490:intron 50.0%
!! GTGCAAGGACTAGTTGTGTG+CGG - chr8_1:61841095-61841114 Msa1205490:intron 50.0%
GGATCAGGAACTGATCCCTT+GGG + chr8_1:61842226-61842245 None:intergenic 50.0%
AGGATCAGGAACTGATCCCT+TGG + chr8_1:61842227-61842246 None:intergenic 50.0%
TACCAGCTTTCTTGGCTGCA+CGG + chr8_1:61842370-61842389 None:intergenic 50.0%
TGTTGAATGGTGCAGGTGGA+TGG - chr8_1:61842450-61842469 Msa1205490:CDS 50.0%
! TGGTGAAGCTTTTGTCCCTG+TGG - chr8_1:61842592-61842611 Msa1205490:CDS 50.0%
ATATTCCGCAAGGAGATCGG+AGG - chr8_1:61843391-61843410 Msa1205490:CDS 50.0%
TACTTCCTCCGATCTCCTTG+CGG + chr8_1:61843399-61843418 None:intergenic 50.0%
!! ATCTTTAGGGCAATCCCAGG+TGG + chr8_1:61843540-61843559 None:intergenic 50.0%
CTTCCTTAGACATCGCAGAC+AGG - chr8_1:61843678-61843697 Msa1205490:CDS 50.0%
AAGCCTGTCTGCGATGTCTA+AGG + chr8_1:61843684-61843703 None:intergenic 50.0%
AGACATCGCAGACAGGCTTA+TGG - chr8_1:61843685-61843704 Msa1205490:CDS 50.0%
GCAAAAAAGATGGACGGGTG+CGG + chr8_1:61843778-61843797 None:intergenic 50.0%
! ATATGGTGGAAATCCACCCC+CGG + chr8_1:61843983-61844002 None:intergenic 50.0%
TCCCTCCCCTTTGTCCCTTT+CGG - chr8_1:61838011-61838030 Msa1205490:three_prime_UTR 55.0%
TCCGAAAGGGACAAAGGGGA+GGG + chr8_1:61838015-61838034 None:intergenic 55.0%
ATCCGAAAGGGACAAAGGGG+AGG + chr8_1:61838016-61838035 None:intergenic 55.0%
CCCCTTTGTCCCTTTCGGAT+TGG - chr8_1:61838016-61838035 Msa1205490:three_prime_UTR 55.0%
CCGCCTAAGTCCAATCCGAA+AGG + chr8_1:61838029-61838048 None:intergenic 55.0%
! TCGGATTGGACTTAGGCGGT+TGG - chr8_1:61838030-61838049 Msa1205490:three_prime_UTR 55.0%
! CGGATTGGACTTAGGCGGTT+GGG - chr8_1:61838031-61838050 Msa1205490:three_prime_UTR 55.0%
GCGGTTGGGTTCATCTGAAC+CGG - chr8_1:61838045-61838064 Msa1205490:three_prime_UTR 55.0%
TGATGGGAGCTGGAGTTTCG+AGG - chr8_1:61838094-61838113 Msa1205490:three_prime_UTR 55.0%
CTCCGATCGCTTTCTCTCAC+CGG - chr8_1:61838269-61838288 Msa1205490:three_prime_UTR 55.0%
CCAGAGTGCGCACTCTCAAT+CGG + chr8_1:61838606-61838625 None:intergenic 55.0%
! CGATTGAGAGTGCGCACTCT+GGG - chr8_1:61838604-61838623 Msa1205490:intron 55.0%
GTTCCATTCTCGGCACCGTT+AGG - chr8_1:61838681-61838700 Msa1205490:intron 55.0%
CATTCTCGGCACCGTTAGGA+GGG - chr8_1:61838685-61838704 Msa1205490:intron 55.0%
GCACCGTTAGGAGGGATGTA+TGG - chr8_1:61838693-61838712 Msa1205490:intron 55.0%
TAGGGAAGGCTGGGGAAGAT+CGG - chr8_1:61838883-61838902 Msa1205490:intron 55.0%
TGGGGAAGATCGGGTTCATG+TGG - chr8_1:61838893-61838912 Msa1205490:intron 55.0%
GGAAGATCGGGTTCATGTGG+TGG - chr8_1:61838896-61838915 Msa1205490:intron 55.0%
GGTTCATGTGGTGGTTTCGG+AGG - chr8_1:61838905-61838924 Msa1205490:intron 55.0%
GAGCAGGGGTGGTTGTTTGT+TGG - chr8_1:61838927-61838946 Msa1205490:intron 55.0%
GGAGAGTCATAACCCCGTTG+AGG - chr8_1:61839061-61839080 Msa1205490:intron 55.0%
GAGTCATAACCCCGTTGAGG+TGG - chr8_1:61839064-61839083 Msa1205490:intron 55.0%
! CCTCCTTTTCCACCTCAACG+GGG + chr8_1:61839076-61839095 None:intergenic 55.0%
! CCCTCCTTTTCCACCTCAAC+GGG + chr8_1:61839077-61839096 None:intergenic 55.0%
CCCGTTGAGGTGGAAAAGGA+GGG - chr8_1:61839074-61839093 Msa1205490:intron 55.0%
GACTGAAATTGGACCGGCTG+TGG - chr8_1:61839136-61839155 Msa1205490:intron 55.0%
AATTGGACCGGCTGTGGGAA+CGG - chr8_1:61839142-61839161 Msa1205490:intron 55.0%
TTACTCTCCGTTCCCACAGC+CGG + chr8_1:61839152-61839171 None:intergenic 55.0%
GAACGGAGAGTAAACGGCGT+AGG - chr8_1:61839159-61839178 Msa1205490:intron 55.0%
AATGCCAATGCAGGTTCGGC+AGG - chr8_1:61839278-61839297 Msa1205490:intron 55.0%
AAACCCTCTGCTTCTGGCAC+TGG - chr8_1:61839461-61839480 Msa1205490:intron 55.0%
CTACCAGTGCCAGAAGCAGA+GGG + chr8_1:61839467-61839486 None:intergenic 55.0%
ACTACCAGTGCCAGAAGCAG+AGG + chr8_1:61839468-61839487 None:intergenic 55.0%
!! TCTGCTTCTGGCACTGGTAG+TGG - chr8_1:61839467-61839486 Msa1205490:intron 55.0%
GGGTCCGGTGGATCATGATT+TGG - chr8_1:61839511-61839530 Msa1205490:intron 55.0%
!! GGAAGTACCCTGATCCTCCT+TGG + chr8_1:61839726-61839745 None:intergenic 55.0%
AGATCCTGCCCCAAATGCTC+TGG + chr8_1:61840537-61840556 None:intergenic 55.0%
TCGCTCTGTCGTGATAGCAG+TGG + chr8_1:61840857-61840876 None:intergenic 55.0%
GCTATCACGACAGAGCGACA+CGG - chr8_1:61840859-61840878 Msa1205490:intron 55.0%
TAGAGAGAGGCAGTGGGTGT+GGG + chr8_1:61841055-61841074 None:intergenic 55.0%
ATAGAGAGAGGCAGTGGGTG+TGG + chr8_1:61841056-61841075 None:intergenic 55.0%
GCTGGAATAGAGAGAGGCAG+TGG + chr8_1:61841062-61841081 None:intergenic 55.0%
!!! ACCTCTGTCGGTTTTGGGGT+TGG - chr8_1:61841608-61841627 Msa1205490:intron 55.0%
ATGCAGCTGTCAATCCCGGA+CGG + chr8_1:61841647-61841666 None:intergenic 55.0%
GTGACGTACTGAAGGGAAGC+AGG + chr8_1:61842192-61842211 None:intergenic 55.0%
GGACCAGAAGCTCAAGGGAA+TGG + chr8_1:61842709-61842728 None:intergenic 55.0%
TTGCCTGAGTTTGGCCGAGA+TGG - chr8_1:61843079-61843098 Msa1205490:CDS 55.0%
ACGGGTGCGGAAATGGTGAA+CGG + chr8_1:61843765-61843784 None:intergenic 55.0%
AAGATGGACGGGTGCGGAAA+TGG + chr8_1:61843772-61843791 None:intergenic 55.0%
GACAAAGGGGAGGGAAGCGA+GGG + chr8_1:61838006-61838025 None:intergenic 60.0%
GAAGAATCTTCCGCCGCCGT+TGG - chr8_1:61838435-61838454 Msa1205490:three_prime_UTR 60.0%
ACCACAACCTCCTCCAACGG+CGG + chr8_1:61838451-61838470 None:intergenic 60.0%
GCCACCACAACCTCCTCCAA+CGG + chr8_1:61838454-61838473 None:intergenic 60.0%
! CCTCTCGGCACAGGTTGAAG+CGG + chr8_1:61838543-61838562 None:intergenic 60.0%
CTTCAACCTGTGCCGAGAGG+TGG - chr8_1:61838543-61838562 Msa1205490:CDS 60.0%
AACTCACCACCTCTCGGCAC+AGG + chr8_1:61838552-61838571 None:intergenic 60.0%
GTGCGCACTCTCAATCGGAC+CGG + chr8_1:61838601-61838620 None:intergenic 60.0%
! CCGATTGAGAGTGCGCACTC+TGG - chr8_1:61838603-61838622 Msa1205490:intron 60.0%
GCGCACTCTGGGCCGATTAA+CGG - chr8_1:61838615-61838634 Msa1205490:intron 60.0%
CACTCTGGGCCGATTAACGG+CGG - chr8_1:61838618-61838637 Msa1205490:intron 60.0%
TACACCACCGGAATCCCCAC+CGG + chr8_1:61838646-61838665 None:intergenic 60.0%
GATTCCGGTGGTGTAGGTGG+CGG - chr8_1:61838651-61838670 Msa1205490:intron 60.0%
TCTTCCGCCACCTACACCAC+CGG + chr8_1:61838658-61838677 None:intergenic 60.0%
! CCTCCTAACGGTGCCGAGAA+TGG + chr8_1:61838687-61838706 None:intergenic 60.0%
CCATTCTCGGCACCGTTAGG+AGG - chr8_1:61838684-61838703 Msa1205490:intron 60.0%
TTCGGAGAAGAAGCGGCCGT+GGG - chr8_1:61838767-61838786 Msa1205490:intron 60.0%
TTCAACACCGGCACCACCCA+CGG + chr8_1:61838786-61838805 None:intergenic 60.0%
GAGGAAAGAGGTTCCGGCCA+AGG - chr8_1:61838815-61838834 Msa1205490:intron 60.0%
AGAGGTTCCGGCCAAGGAGA+AGG - chr8_1:61838821-61838840 Msa1205490:intron 60.0%
TCCACTGCCTTCTCCTTGGC+CGG + chr8_1:61838831-61838850 None:intergenic 60.0%
CACCTCCACTGCCTTCTCCT+TGG + chr8_1:61838835-61838854 None:intergenic 60.0%
TGTGCAGTGGGCGTTAGGGA+AGG - chr8_1:61838869-61838888 Msa1205490:intron 60.0%
AGTGGGCGTTAGGGAAGGCT+GGG - chr8_1:61838874-61838893 Msa1205490:intron 60.0%
AGGGAAGGCTGGGGAAGATC+GGG - chr8_1:61838884-61838903 Msa1205490:intron 60.0%
TGTGGTGGTTTCGGAGGAGC+AGG - chr8_1:61838911-61838930 Msa1205490:intron 60.0%
GTGGTGGTTTCGGAGGAGCA+GGG - chr8_1:61838912-61838931 Msa1205490:intron 60.0%
TGGTGGTTTCGGAGGAGCAG+GGG - chr8_1:61838913-61838932 Msa1205490:intron 60.0%
CCCCGTTGAGGTGGAAAAGG+AGG - chr8_1:61839073-61839092 Msa1205490:intron 60.0%
ACTGCCTGCCGAACCTGCAT+TGG + chr8_1:61839285-61839304 None:intergenic 60.0%
CAGGTTCGGCAGGCAGTAGA+CGG - chr8_1:61839288-61839307 Msa1205490:intron 60.0%
!! GCTTCTGGCACTGGTAGTGG+TGG - chr8_1:61839470-61839489 Msa1205490:intron 60.0%
!! TCTGGCACTGGTAGTGGTGG+TGG - chr8_1:61839473-61839492 Msa1205490:intron 60.0%
!! CTGGCACTGGTAGTGGTGGT+GGG - chr8_1:61839474-61839493 Msa1205490:intron 60.0%
TGGTGGGAGGAGGCGGAAAT+TGG - chr8_1:61839490-61839509 Msa1205490:intron 60.0%
GGTGGGAGGAGGCGGAAATT+GGG - chr8_1:61839491-61839510 Msa1205490:intron 60.0%
GAGGAGGCGGAAATTGGGTC+CGG - chr8_1:61839496-61839515 Msa1205490:intron 60.0%
! GTCACCAGAGCATTTGGGGC+AGG - chr8_1:61840530-61840549 Msa1205490:intron 60.0%
AGTGGCGCCGCTATTAGACC+AGG + chr8_1:61840839-61840858 None:intergenic 60.0%
GCCAACCCCAAAACCGACAG+AGG + chr8_1:61841612-61841631 None:intergenic 60.0%
TGTTGGGCAGGATCTCCGTC+TGG + chr8_1:61842326-61842345 None:intergenic 60.0%
CAGCTTTCTTGGCTGCACGG+AGG + chr8_1:61842367-61842386 None:intergenic 60.0%
CTCCGTGCAGCCAAGAAAGC+TGG - chr8_1:61842365-61842384 Msa1205490:CDS 60.0%
GCGCTGGACCAGAAGCTCAA+GGG + chr8_1:61842714-61842733 None:intergenic 60.0%
! AGCGCTGGACCAGAAGCTCA+AGG + chr8_1:61842715-61842734 None:intergenic 60.0%
GTGCCATCTCGGCCAAACTC+AGG + chr8_1:61843085-61843104 None:intergenic 60.0%
TGACAATCTGTAGCCGGGGG+TGG - chr8_1:61843967-61843986 Msa1205490:five_prime_UTR 60.0%
GGACAAAGGGGAGGGAAGCG+AGG + chr8_1:61838007-61838026 None:intergenic 65.0%
GAATCTTCCGCCGCCGTTGG+AGG - chr8_1:61838438-61838457 Msa1205490:three_prime_UTR 65.0%
ACAACCTCCTCCAACGGCGG+CGG + chr8_1:61838448-61838467 None:intergenic 65.0%
GCCGTTGGAGGAGGTTGTGG+TGG - chr8_1:61838450-61838469 Msa1205490:three_prime_UTR 65.0%
CCGCTTCAACCTGTGCCGAG+AGG - chr8_1:61838540-61838559 Msa1205490:CDS 65.0%
GGTGGGGATTCCGGTGGTGT+AGG - chr8_1:61838645-61838664 Msa1205490:intron 65.0%
GGGGATTCCGGTGGTGTAGG+TGG - chr8_1:61838648-61838667 Msa1205490:intron 65.0%
CTTCGGAGAAGAAGCGGCCG+TGG - chr8_1:61838766-61838785 Msa1205490:intron 65.0%
TCCGGCCAAGGAGAAGGCAG+TGG - chr8_1:61838827-61838846 Msa1205490:intron 65.0%
GGCCAAGGAGAAGGCAGTGG+AGG - chr8_1:61838830-61838849 Msa1205490:intron 65.0%
CAGTGGGCGTTAGGGAAGGC+TGG - chr8_1:61838873-61838892 Msa1205490:intron 65.0%
GTGGGCGTTAGGGAAGGCTG+GGG - chr8_1:61838875-61838894 Msa1205490:intron 65.0%
TGGTTTCGGAGGAGCAGGGG+TGG - chr8_1:61838916-61838935 Msa1205490:intron 65.0%
GTTCGGCAGGCAGTAGACGG+TGG - chr8_1:61839291-61839310 Msa1205490:intron 65.0%
!! GCACTGGTAGTGGTGGTGGG+AGG - chr8_1:61839477-61839496 Msa1205490:intron 65.0%
!! CTGGTAGTGGTGGTGGGAGG+AGG - chr8_1:61839480-61839499 Msa1205490:intron 65.0%
!! GTAGTGGTGGTGGGAGGAGG+CGG - chr8_1:61839483-61839502 Msa1205490:intron 65.0%
GAGGCGGAAATTGGGTCCGG+TGG - chr8_1:61839499-61839518 Msa1205490:intron 65.0%
CACGACAGAGCGACACGGAG+CGG - chr8_1:61840864-61840883 Msa1205490:intron 65.0%
ACGACAGAGCGACACGGAGC+GGG - chr8_1:61840865-61840884 Msa1205490:intron 65.0%
GGCCACTACATGCAGCCGTC+CGG - chr8_1:61841629-61841648 Msa1205490:intron 65.0%
GCCACTACATGCAGCCGTCC+GGG - chr8_1:61841630-61841649 Msa1205490:intron 65.0%
TCCCGGACGGCTGCATGTAG+TGG + chr8_1:61841634-61841653 None:intergenic 65.0%
TCTTCCGCCGCCGTTGGAGG+AGG - chr8_1:61838441-61838460 Msa1205490:three_prime_UTR 70.0%
GCCGCCGTTGGAGGAGGTTG+TGG - chr8_1:61838447-61838466 Msa1205490:three_prime_UTR 70.0%
CCACCGGCGCCGCCGTTAAT+CGG + chr8_1:61838630-61838649 None:intergenic 70.0%
!! CGATTAACGGCGGCGCCGGT+GGG - chr8_1:61838628-61838647 Msa1205490:intron 70.0%
!! GATTAACGGCGGCGCCGGTG+GGG - chr8_1:61838629-61838648 Msa1205490:intron 70.0%
GGAGAAGAAGCGGCCGTGGG+TGG - chr8_1:61838770-61838789 Msa1205490:intron 70.0%
ACAGAGCGACACGGAGCGGG+TGG - chr8_1:61840868-61840887 Msa1205490:intron 70.0%
GGGCCGATTAACGGCGGCGC+CGG - chr8_1:61838624-61838643 Msa1205490:intron 75.0%
! CCGATTAACGGCGGCGCCGG+TGG - chr8_1:61838627-61838646 Msa1205490:intron 75.0%
GAAGCGGCCGTGGGTGGTGC+CGG - chr8_1:61838776-61838795 Msa1205490:intron 75.0%
!!! GGCGGCGCCGGTGGGGATTC+CGG - chr8_1:61838636-61838655 Msa1205490:intron 80.0%
!!! GGCGCCGGTGGGGATTCCGG+TGG - chr8_1:61838639-61838658 Msa1205490:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 61837933 61844043 61837933 ID=Msa1205490;Name=Msa1205490
chr8_1 mRNA 61837933 61844043 61837933 ID=Msa1205490-mRNA-1;Parent=Msa1205490;Name=Msa1205490-mRNA-1;_AED=0.02;_eAED=0.02;_QI=163|1|1|1|1|1|4|552|780
chr8_1 exon 61837933 61838609 61837933 ID=Msa1205490-mRNA-1:exon:20046;Parent=Msa1205490-mRNA-1
chr8_1 exon 61839590 61839854 61839590 ID=Msa1205490-mRNA-1:exon:20045;Parent=Msa1205490-mRNA-1
chr8_1 exon 61841411 61841524 61841411 ID=Msa1205490-mRNA-1:exon:20044;Parent=Msa1205490-mRNA-1
chr8_1 exon 61842042 61844043 61842042 ID=Msa1205490-mRNA-1:exon:20043;Parent=Msa1205490-mRNA-1
chr8_1 five_prime_UTR 61843881 61844043 61843881 ID=Msa1205490-mRNA-1:five_prime_utr;Parent=Msa1205490-mRNA-1
chr8_1 CDS 61842042 61843880 61842042 ID=Msa1205490-mRNA-1:cds;Parent=Msa1205490-mRNA-1
chr8_1 CDS 61841411 61841524 61841411 ID=Msa1205490-mRNA-1:cds;Parent=Msa1205490-mRNA-1
chr8_1 CDS 61839590 61839854 61839590 ID=Msa1205490-mRNA-1:cds;Parent=Msa1205490-mRNA-1
chr8_1 CDS 61838485 61838609 61838485 ID=Msa1205490-mRNA-1:cds;Parent=Msa1205490-mRNA-1
chr8_1 three_prime_UTR 61837933 61838484 61837933 ID=Msa1205490-mRNA-1:three_prime_utr;Parent=Msa1205490-mRNA-1
Gene Sequence

>Msa1205490

ATGGGAGCTGGAGTTTCGAGGTTGTGTTCTTGTTTCGAACCGGTTCAACACCGGAACAACAAAAAAACCGACAACCAAGACGTTACTATTTTCACTGATGAACCGTTAGATGAAACCCTAGGTCATTCTTTCTGTTACGTTAGATCTTCGGCCAGGTTTCTTTCTCCGACTCACTCCGATCGCTTTCTCTCACCGGAATCTACTTCTCTTCGGTTTTCACCTACTCATGAATCGGTTCTTAGAACCCGACCCGATTTTCGTGAAACCGCTTTTAAAGCTATTTCTGGTGCTTCTGTTAGTGCTAATAGTTCTGTTCCGAAAACGGTTATTCAGTTAGAAGAAGAATCTTCCGCCGCCGTTGGAGGAGGTTGTGGTGGCGATTTTGTCACCGGTAAGGGTAATATTGTAAATGGCTTTGAAAGTACGTCGTCGTTTAGTGCTCTACCGCTTCAACCTGTGCCGAGAGGTGGTGAGTTTTTTGAGGGGAGTGGTTATTTTCTCTCCGGTCCGATTGAGAGTGCGCACTCTGGGCCGATTAACGGCGGCGCCGGTGGGGATTCCGGTGGTGTAGGTGGCGGAAGAGATGTTCCATTCTCGGCACCGTTAGGAGGGATGTATGGAAGGAAGAAAGGTGTGTCAGGGTTTAGGAAGGCATTTCAACGGAAGGTGTCTTCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGTTGAATTTTGTTGGGAGGAAAGAGGTTCCGGCCAAGGAGAAGGCAGTGGAGGTGAAAAATGAGAGTAATGTGCAGTGGGCGTTAGGGAAGGCTGGGGAAGATCGGGTTCATGTGGTGGTTTCGGAGGAGCAGGGGTGGTTGTTTGTTGGGATTTACGACGGTTTTAATGGACCGGATGCACCTGAGTTTTTGATGGGGCATATGTACCGCAATGTTCATAATGAGCTTCAGGGTTTGTTTTGGGAACTTGATGAACCAATGGAGAGTCATAACCCCGTTGAGGTGGAAAAGGAGGGAGAAAATTCAGGTTCTGGTTTGGTGAATATGGTACAACAGACTGAAATTGGACCGGCTGTGGGAACGGAGAGTAAACGGCGTAGGTTGTGGGAATTTTTGGCTGAAGATCCTGAAGATGGACTTGATCTTTCTGGGTCGGATAGGTTTGCGTTTTCAGTTGACGATGCACTTAGTGTTAGCAATGCCAATGCAGGTTCGGCAGGCAGTAGACGGTGGCTGTTGCTGTCCAGACTGAAGAACGGTTTGTCAAAGCATAAGGAGGGTGATGGTTTGCCAAAACATAAGGAGGGTAATGGTAGGAAGTTGTTACCGTGGAATTTGGGGAATCAGGAAGAGAAAGAAGAAAAGTCTAAGGTGGAAAACAAACCCTCTGCTTCTGGCACTGGTAGTGGTGGTGGGAGGAGGCGGAAATTGGGTCCGGTGGATCATGATTTGGTTTTGAATGCAATGTCGCGGGCTCTTGAAGTGACAGAACTTGCGTATTTGGATATGACGGAAAAGCTTCTGGATACAAATCCTGAACTTGCTTTGATGGGTTCATGTCTGTTGGTTGTTTTGATGAGGGATGAGGACGTGTATGTTATGAATGTTGGGGATAGTCGTGCAATTGTAGCACATTATGAGCCCAAGGAGGATCAGGGTACTTCCAATGTGGAATCTGCAAGCAAGGGAGATGTTCGTGTTGGTTCCAGCAGTGAGAGCATAGTTGAAGAGTCCTTTGCTTTAGATGGAACTCAAACTGAAACCACAATCAAGGTCGGCAATGAGGGTTCTGCTCAAGAAATGAGGTTGGCGGCATTGCAGCTGTCTACTGACCACAGCACCAGCATTAAAGAAGAAATCATTAGAATTAAAAATGAGCATCCTGATGATCCCCGTTGCATAGTCAATGATAGAGTTAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGGGCAGGATCTTTGAAAAGGCCGAAGTTGAATGATGCCGTACTGGAAATGTTTCGTAATGAATTTATTGGAACTGCCCCATACATATCCTGCTTCCCTTCAGTACGTCACCATAGATTAAGCCCAAGGGATCAGTTCCTGATCCTCTCATCTGATGGTTTGTATCAATATCTAAACAATGAAGAAGTTGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGACGGAGATCCTGCCCAACATTTAATTGAAGAGCTGCTCCTCCGTGCAGCCAAGAAAGCTGGAATGGATTTTCATGAATTGCTGGATATTCCGCAAGGAGATCGGAGGAAGTATCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCAGGGAAATATCTGTGA
Protein sequence

>Msa1205490

MGAGVSRLCSCFEPVQHRNNKKTDNQDVTIFTDEPLDETLGHSFCYVRSSARFLSPTHSDRFLSPESTSLRFSPTHESVLRTRPDFRETAFKAISGASVSANSSVPKTVIQLEEESSAAVGGGCGGDFVTGKGNIVNGFESTSSFSALPLQPVPRGGEFFEGSGYFLSGPIESAHSGPINGGAGGDSGGVGGGRDVPFSAPLGGMYGRKKGVSGFRKAFQRKVSSEKKRPWVVPVLNFVGRKEVPAKEKAVEVKNESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHMYRNVHNELQGLFWELDEPMESHNPVEVEKEGENSGSGLVNMVQQTEIGPAVGTESKRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVSNANAGSAGSRRWLLLSRLKNGLSKHKEGDGLPKHKEGNGRKLLPWNLGNQEEKEEKSKVENKPSASGTGSGGGRRRKLGPVDHDLVLNAMSRALEVTELAYLDMTEKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKEDQGTSNVESASKGDVRVGSSSESIVEESFALDGTQTETTIKVGNEGSAQEMRLAALQLSTDHSTSIKEEIIRIKNEHPDDPRCIVNDRVKGRLKVTRAFGAGSLKRPKLNDAVLEMFRNEFIGTAPYISCFPSVRHHRLSPRDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL*