AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1205890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205890 MtrunA17_Chr4g0054811 98.205 780 13 1 1 780 1 779 0.0 1569
Msa1205890 MtrunA17_Chr1g0193691 57.183 355 129 6 434 777 550 892 5.44e-118 377
Msa1205890 MtrunA17_Chr1g0193691 38.974 390 143 17 1 327 1 358 2.34e-54 202
Msa1205890 MtrunA17_Chr4g0031521 51.397 358 134 6 423 775 380 702 8.61e-109 348
Msa1205890 MtrunA17_Chr4g0031521 36.188 362 145 12 1 317 1 321 7.61e-46 175
Msa1205890 MtrunA17_Chr7g0238501 50.167 299 94 2 477 775 310 553 6.71e-93 301
Msa1205890 MtrunA17_Chr7g0238501 56.364 55 24 0 258 312 238 292 5.02e-16 82.0
Msa1205890 MtrunA17_Chr4g0039061 48.495 299 101 3 478 776 245 490 3.20e-85 279
Msa1205890 MtrunA17_Chr4g0039061 39.831 118 58 3 215 320 123 239 3.91e-19 91.7
Msa1205890 MtrunA17_Chr2g0295991 40.690 290 125 3 479 768 234 476 9.47e-60 210
Msa1205890 MtrunA17_Chr2g0295991 52.459 61 29 0 257 317 140 200 5.90e-13 72.0
Msa1205890 MtrunA17_Chr4g0067301 38.754 289 132 3 480 768 244 487 2.83e-56 201
Msa1205890 MtrunA17_Chr4g0067301 57.812 64 26 1 259 322 140 202 5.50e-14 75.5
Msa1205890 MtrunA17_Chr1g0213351 28.525 305 159 5 470 769 105 355 4.05e-34 134
Msa1205890 MtrunA17_Chr8g0371321 29.966 297 149 5 481 772 115 357 5.37e-32 129
Msa1205890 MtrunA17_Chr2g0294291 29.617 287 143 5 487 768 118 350 1.48e-30 124
Msa1205890 MtrunA17_Chr1g0207571 28.045 353 181 7 448 779 48 348 8.09e-30 122
Msa1205890 MtrunA17_Chr7g0250061 26.299 308 168 6 470 772 101 354 1.39e-28 118
Msa1205890 MtrunA17_Chr7g0263281 29.126 309 160 6 476 779 102 356 5.21e-28 116
Msa1205890 MtrunA17_Chr1g0181901 27.647 340 166 8 470 779 101 390 5.69e-28 117
Msa1205890 MtrunA17_Chr1g0211251 27.759 299 157 6 479 772 115 359 3.71e-25 108
Msa1205890 MtrunA17_Chr7g0223641 42.308 130 67 2 647 768 67 196 2.15e-23 99.0
Msa1205890 MtrunA17_Chr1g0175381 26.623 308 160 9 473 774 111 358 3.17e-23 102
Msa1205890 MtrunA17_Chr3g0089711 26.861 309 150 10 476 769 100 347 5.91e-20 92.4
Msa1205890 MtrunA17_Chr3g0089721 26.861 309 150 10 476 769 100 347 6.21e-20 92.4
Msa1205890 MtrunA17_Chr3g0089691 26.537 309 151 10 476 769 14 261 1.44e-19 90.5
Msa1205890 MtrunA17_Chr7g0256751 31.944 216 116 8 573 766 139 345 3.12e-17 85.1
Msa1205890 MtrunA17_Chr7g0256771 33.544 158 84 6 573 713 140 293 8.31e-13 70.1
Msa1205890 MtrunA17_Chr7g0256761 27.513 189 115 5 591 773 13 185 1.21e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205890 AT2G35350.1 55.298 821 288 29 1 780 1 783 0.0 764
Msa1205890 AT2G46920.3 43.148 883 361 30 1 779 1 846 0.0 563
Msa1205890 AT2G46920.1 43.148 883 361 30 1 779 1 846 0.0 563
Msa1205890 AT2G46920.2 43.148 883 361 30 1 779 1 846 0.0 563
Msa1205890 AT2G46920.4 43.148 883 361 30 1 779 1 846 0.0 563
Msa1205890 AT5G02400.1 40.000 770 300 20 40 776 33 673 9.92e-156 469
Msa1205890 AT1G07630.1 57.426 303 108 5 475 775 377 660 1.05e-108 347
Msa1205890 AT1G07630.1 36.915 363 135 14 1 317 1 315 1.71e-46 177
Msa1205890 AT2G28890.1 57.000 300 104 4 480 775 374 652 1.70e-105 338
Msa1205890 AT2G28890.1 35.952 420 171 17 1 377 1 365 1.16e-51 191
Msa1205890 AT3G09400.1 57.000 300 102 4 477 776 377 649 9.00e-104 333
Msa1205890 AT3G09400.1 33.438 317 132 10 36 316 31 304 1.17e-34 141
Msa1205890 AT3G09400.2 53.030 264 97 4 477 740 377 613 1.74e-77 263
Msa1205890 AT3G09400.2 33.438 317 132 10 36 316 31 304 1.14e-34 141
Msa1205890 AT3G16560.1 37.716 289 129 2 480 768 243 480 7.01e-60 211
Msa1205890 AT3G16560.1 58.929 56 23 0 259 314 151 206 3.70e-12 70.1
Msa1205890 AT3G16560.4 37.716 289 129 2 480 768 243 480 7.01e-60 211
Msa1205890 AT3G16560.4 58.929 56 23 0 259 314 151 206 3.70e-12 70.1
Msa1205890 AT3G16560.2 37.716 289 129 2 480 768 243 480 7.01e-60 211
Msa1205890 AT3G16560.2 58.929 56 23 0 259 314 151 206 3.70e-12 70.1
Msa1205890 AT3G16560.3 35.632 261 117 2 480 740 243 452 9.58e-47 173
Msa1205890 AT3G16560.3 58.929 56 23 0 259 314 151 206 3.55e-12 69.7
Msa1205890 AT3G12620.2 27.922 308 163 5 470 772 108 361 1.36e-33 134
Msa1205890 AT3G12620.1 27.922 308 163 5 470 772 108 361 1.36e-33 134
Msa1205890 AT3G55050.1 30.612 294 145 5 482 770 121 360 1.51e-32 130
Msa1205890 AT3G55050.2 30.612 294 145 5 482 770 121 360 1.51e-32 130
Msa1205890 AT4G38520.2 29.861 288 143 5 484 766 120 353 9.35e-32 129
Msa1205890 AT4G38520.1 29.861 288 143 5 484 766 120 353 9.35e-32 129
Msa1205890 AT5G66080.2 30.952 294 144 5 481 769 14 253 1.70e-31 125
Msa1205890 AT3G17090.1 29.897 291 144 5 483 768 123 358 5.45e-31 126
Msa1205890 AT5G66080.1 30.640 297 147 5 481 772 118 360 7.48e-31 125
Msa1205890 AT4G33920.1 27.966 354 183 8 448 780 48 350 6.91e-30 122
Msa1205890 AT4G33920.2 28.664 307 163 6 479 780 12 267 6.93e-30 120
Msa1205890 AT3G51370.1 28.231 294 152 5 481 769 115 354 1.36e-29 122
Msa1205890 AT3G51370.3 28.231 294 152 5 481 769 115 354 1.36e-29 122
Msa1205890 AT3G51370.2 28.912 294 150 5 481 769 30 269 2.37e-29 119
Msa1205890 AT5G02760.1 32.302 291 136 5 483 768 110 344 3.15e-29 120
Msa1205890 AT4G33920.3 29.167 288 148 6 498 780 1 237 6.47e-28 114
Msa1205890 AT5G06750.2 27.797 295 157 6 483 772 38 281 1.78e-25 108
Msa1205890 AT5G06750.3 27.797 295 157 6 483 772 120 363 2.33e-25 109
Msa1205890 AT5G06750.1 27.797 295 157 6 483 772 120 363 2.33e-25 109
Msa1205890 AT3G17090.2 28.390 236 113 4 483 713 123 307 6.49e-22 97.8

Find 315 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGATGGACTTGATCTTTC+TGG 0.099082 8_1:-62509438 Msa1205890:CDS
AGTGACAGAACTTGCGTATT+TGG 0.202868 8_1:-62509085 Msa1205890:CDS
ATCCAATTTACCAGCTTTCT+TGG 0.203939 8_1:+62506274 None:intergenic
GAAGTTGTTACCGTGGAATT+TGG 0.238013 8_1:-62509250 Msa1205890:CDS
AGGTTCTGGTTTGGTGAATA+TGG 0.245862 8_1:-62509541 Msa1205890:CDS
ATGTTTCGTAATGAATTTAT+TGG 0.257607 8_1:-62506500 Msa1205890:CDS
AGCAGGGGTGGTTGTTTGTT+GGG 0.260464 8_1:-62509719 Msa1205890:CDS
TCCCTCCCCTTTGTCCCTTT+CGG 0.266738 8_1:-62510636 Msa1205890:five_prime_UTR
CCATTACCCTCCTTATGTTT+TGG 0.271568 8_1:+62509276 None:intergenic
TAGAGTTAGGAGATTCAAAA+TGG 0.279473 8_1:-62504639 Msa1205890:three_prime_UTR
TGGTGGGAGGAGGCGGAAAT+TGG 0.282453 8_1:-62509157 Msa1205890:CDS
AAGTTGTTACCGTGGAATTT+GGG 0.282468 8_1:-62509249 Msa1205890:CDS
CAATGTTCATAATGAGCTTC+AGG 0.293356 8_1:-62509637 Msa1205890:CDS
GGCGGCGCCGGTGGGGATTC+CGG 0.294891 8_1:-62510011 Msa1205890:CDS
CTTAAGGTCACCAGAGCATT+TGG 0.295370 8_1:-62508125 Msa1205890:CDS
AGAAAGGTGTGTCAGGGTTT+AGG 0.301426 8_1:-62509926 Msa1205890:CDS
GAAGCTATGACATCATCTTT+AGG 0.307616 8_1:+62505098 None:intergenic
GGTAAGGGTAATATTGTAAA+TGG 0.309964 8_1:-62510161 Msa1205890:CDS
GAAAACAAACCCTCTGCTTC+TGG 0.312232 8_1:-62509192 Msa1205890:CDS
GGATATGACGGAAAAGCTTC+TGG 0.313191 8_1:-62509064 Msa1205890:CDS
ATGAGCTTCAGGGTTTGTTT+TGG 0.315360 8_1:-62509626 Msa1205890:CDS
ATGGTACAACAGACTGAAAT+TGG 0.316789 8_1:-62509522 Msa1205890:CDS
GAAGAGTCCTTTGCTTTAGA+TGG 0.323123 8_1:-62508841 Msa1205890:CDS
GAGCAGGGGTGGTTGTTTGT+TGG 0.330236 8_1:-62509720 Msa1205890:CDS
CCACCGGCGCCGCCGTTAAT+CGG 0.331241 8_1:+62510020 None:intergenic
CCCCTTTGTCCCTTTCGGAT+TGG 0.332221 8_1:-62510631 Msa1205890:five_prime_UTR
ACTCCAGCTCCCATCACATT+AGG 0.332953 8_1:+62510560 None:intergenic
CTGGTAGTGGTGGTGGGAGG+AGG 0.336277 8_1:-62509167 Msa1205890:CDS
CACCATATCAAATTAGAGTT+AGG 0.338175 8_1:-62504652 Msa1205890:three_prime_UTR
CTCCTAACTCTAATTTGATA+TGG 0.338585 8_1:+62504650 None:intergenic
TCGGGTTCATGTGGTGGTTT+CGG 0.339032 8_1:-62509745 Msa1205890:CDS
GATCCCTTGGGCTTAATCTA+TGG 0.344114 8_1:+62506438 None:intergenic
AAAAGCGGTTTCACGAAAAT+CGG 0.344431 8_1:+62510301 None:intergenic
GAGGGAGAAAATTCAGGTTC+TGG 0.349852 8_1:-62509555 Msa1205890:CDS
AAGCTATGACATCATCTTTA+GGG 0.353224 8_1:+62505099 None:intergenic
AAATCCTGAACTTGCTTTGA+TGG 0.353828 8_1:-62509037 Msa1205890:CDS
CACCTCCACTGCCTTCTCCT+TGG 0.354125 8_1:+62509815 None:intergenic
ACCGTGGAATTTGGGGAATC+AGG 0.355154 8_1:-62509241 Msa1205890:CDS
CGATTAACGGCGGCGCCGGT+GGG 0.364404 8_1:-62510019 Msa1205890:CDS
TTCTCAAGTTGAGAGCTTCA+TGG 0.365862 8_1:-62506357 Msa1205890:CDS
ATTTACAATATTACCCTTAC+CGG 0.369542 8_1:+62510163 None:intergenic
AGAGAAAGAAGAAAAGTCTA+AGG 0.374405 8_1:-62509217 Msa1205890:CDS
TTAAGGTCACCAGAGCATTT+GGG 0.376676 8_1:-62508124 Msa1205890:CDS
TGTGGTGGTTTCGGAGGAGC+AGG 0.376868 8_1:-62509736 Msa1205890:CDS
CAGTGGGCGTTAGGGAAGGC+TGG 0.377014 8_1:-62509774 Msa1205890:CDS
AGTAAAATGTTGGTGTATAT+TGG 0.377380 8_1:-62504753 Msa1205890:three_prime_UTR
GGACAAAGGGGAGGGAAGCG+AGG 0.381985 8_1:+62510643 None:intergenic
GGGTCCGGTGGATCATGATT+TGG 0.382243 8_1:-62509136 Msa1205890:CDS
GGAAGGAAGAAAGGTGTGTC+AGG 0.387929 8_1:-62509933 Msa1205890:CDS
AAGATGGACTTGATCTTTCT+GGG 0.389359 8_1:-62509437 Msa1205890:CDS
TGTTGGGAGGAAAGAGGTTC+CGG 0.389401 8_1:-62509838 Msa1205890:CDS
ATGTGTATGTTATGAATGTT+GGG 0.391362 8_1:-62508978 Msa1205890:CDS
ATAGTCAATGATAGAGTTAA+AGG 0.391835 8_1:-62508152 Msa1205890:CDS
CCGATTAACGGCGGCGCCGG+TGG 0.392761 8_1:-62510020 Msa1205890:CDS
TCTATCATTGACTATGCAAC+GGG 0.393238 8_1:+62508160 None:intergenic
TTTCTGTTACGTTAGATCTT+CGG 0.394176 8_1:-62510423 Msa1205890:CDS
AGACATCGCAGACAGGCTTA+TGG 0.394262 8_1:-62504962 Msa1205890:three_prime_UTR
AAGCCTGTCTGCGATGTCTA+AGG 0.396094 8_1:+62504966 None:intergenic
TACAAGTGTACTGATTTAAC+TGG 0.398388 8_1:-62504724 Msa1205890:three_prime_UTR
TTATGAGCCCAAGGAGGATC+AGG 0.399296 8_1:-62508932 Msa1205890:CDS
CGGATTGGACTTAGGCGGTT+GGG 0.400961 8_1:-62510616 Msa1205890:five_prime_UTR
AAGATGGACGGGTGCGGAAA+TGG 0.405008 8_1:+62504878 None:intergenic
GGAAGTACCCTGATCCTCCT+TGG 0.406399 8_1:+62508924 None:intergenic
CACCGGAATCTACTTCTCTT+CGG 0.409205 8_1:-62510361 Msa1205890:CDS
TCTGGCACTGGTAGTGGTGG+TGG 0.411034 8_1:-62509174 Msa1205890:CDS
GAAAAGGAGGGAGAAAATTC+AGG 0.411785 8_1:-62509561 Msa1205890:CDS
AGAAAATTCAGGTTCTGGTT+TGG 0.412099 8_1:-62509550 Msa1205890:CDS
TTGTTGTTCCGGTGTTGAAC+CGG 0.413218 8_1:+62510512 None:intergenic
TCCACTGCCTTCTCCTTGGC+CGG 0.417303 8_1:+62509819 None:intergenic
GCGGTTGGGTTCATCTGAAC+CGG 0.420379 8_1:-62510602 Msa1205890:five_prime_UTR
GAAAGATCAAGTCCATCTTC+AGG 0.421503 8_1:+62509441 None:intergenic
GGTGGGAGGAGGCGGAAATT+GGG 0.421685 8_1:-62509156 Msa1205890:CDS
CATTAAAATCTGAGATTCCT+AGG 0.422412 8_1:+62505014 None:intergenic
TGACAAACCGTTCTTCAGTC+TGG 0.425095 8_1:+62509323 None:intergenic
TCCAATCCGAAAGGGACAAA+GGG 0.426458 8_1:+62510630 None:intergenic
GCGCACTCTGGGCCGATTAA+CGG 0.427554 8_1:-62510032 Msa1205890:CDS
GGAAGAATCTGGAAATCGTC+AGG 0.427584 8_1:-62505193 Msa1205890:CDS
CGGAAGAGATGTTCCATTCT+CGG 0.428358 8_1:-62509976 Msa1205890:CDS
GATGTGTATGTTATGAATGT+TGG 0.428927 8_1:-62508979 Msa1205890:CDS
CTCCAGCTCCCATCACATTA+GGG 0.429257 8_1:+62510561 None:intergenic
TCTGCTTCTGGCACTGGTAG+TGG 0.429359 8_1:-62509180 Msa1205890:CDS
CTGGCACTGGTAGTGGTGGT+GGG 0.429653 8_1:-62509173 Msa1205890:CDS
GAAGCGGCCGTGGGTGGTGC+CGG 0.431595 8_1:-62509871 Msa1205890:CDS
TTCAACTATGCTCTCACTGC+TGG 0.432572 8_1:+62508861 None:intergenic
CAGCTCTTCAATTAAATGTT+GGG 0.433697 8_1:+62506310 None:intergenic
TAAGCTTACTTCTTTAATGC+TGG 0.435863 8_1:+62508726 None:intergenic
CTTCGGAGAAGAAGCGGCCG+TGG 0.436890 8_1:-62509881 Msa1205890:CDS
GGGGATTCCGGTGGTGTAGG+TGG 0.441277 8_1:-62509999 Msa1205890:CDS
GAACCCATCAAAGCAAGTTC+AGG 0.441311 8_1:+62509033 None:intergenic
GAGTAAACGGCGTAGGTTGT+GGG 0.442040 8_1:-62509481 Msa1205890:CDS
GAAGGGAAGCAGGATATGTA+TGG 0.443366 8_1:+62506470 None:intergenic
AGGGAAGGCTGGGGAAGATC+GGG 0.444910 8_1:-62509763 Msa1205890:CDS
GTAGTGGTGGTGGGAGGAGG+CGG 0.445074 8_1:-62509164 Msa1205890:CDS
ACTATGCAACGGGGATCATC+AGG 0.445287 8_1:+62508170 None:intergenic
GAAGTACCCTGATCCTCCTT+GGG 0.445862 8_1:+62508925 None:intergenic
TGAGGCGTTCAACTTTCTGT+TGG 0.446080 8_1:-62505160 Msa1205890:three_prime_UTR
GACTGAAATTGGACCGGCTG+TGG 0.448174 8_1:-62509511 Msa1205890:CDS
AGAGTAAACGGCGTAGGTTG+TGG 0.448331 8_1:-62509482 Msa1205890:CDS
CCTCCTAACGGTGCCGAGAA+TGG 0.451026 8_1:+62509963 None:intergenic
CCGATTGAGAGTGCGCACTC+TGG 0.451055 8_1:-62510044 Msa1205890:CDS
GGGCCGATTAACGGCGGCGC+CGG 0.452053 8_1:-62510023 Msa1205890:CDS
ATCCCTAATGTGATGGGAGC+TGG 0.452819 8_1:-62510563 Msa1205890:exon
GCCGCCGTTGGAGGAGGTTG+TGG 0.454293 8_1:-62510200 Msa1205890:CDS
TATCACTTGAAGGAAGAATC+TGG 0.454496 8_1:-62505204 Msa1205890:CDS
TAGGGAAGGCTGGGGAAGAT+CGG 0.454811 8_1:-62509764 Msa1205890:CDS
TCTTCCGCCGCCGTTGGAGG+AGG 0.455984 8_1:-62510206 Msa1205890:CDS
GTCCCTTTCGGATTGGACTT+AGG 0.460445 8_1:-62510624 Msa1205890:five_prime_UTR
CTGTGGGAACGGAGAGTAAA+CGG 0.463635 8_1:-62509494 Msa1205890:CDS
TAATAGTTCTGTTCCGAAAA+CGG 0.463952 8_1:-62510249 Msa1205890:CDS
GTTGTGTTCTTGTTTCGAAC+CGG 0.465481 8_1:-62510531 Msa1205890:CDS
ATTTCAACGGAAGGTGTCTT+CGG 0.465761 8_1:-62509898 Msa1205890:CDS
AGGATCAGGAACTGATCCCT+TGG 0.465955 8_1:+62506425 None:intergenic
GCAGCTCTTCAATTAAATGT+TGG 0.467121 8_1:+62506309 None:intergenic
TCGGATTGGACTTAGGCGGT+TGG 0.467207 8_1:-62510617 Msa1205890:five_prime_UTR
TTGGCTGAAGATCCTGAAGA+TGG 0.467894 8_1:-62509453 Msa1205890:CDS
TTGGGGCAGGATCTTTGAAA+AGG 0.471296 8_1:-62508106 Msa1205890:CDS
CGATTGAGAGTGCGCACTCT+GGG 0.472196 8_1:-62510043 Msa1205890:CDS
GTTCCATTCTCGGCACCGTT+AGG 0.473929 8_1:-62509966 Msa1205890:CDS
AATAGTAACGTCTTGGTTGT+CGG 0.474148 8_1:+62510484 None:intergenic
CCAGAGTGCGCACTCTCAAT+CGG 0.475630 8_1:+62510044 None:intergenic
CTCCGATCGCTTTCTCTCAC+CGG 0.476274 8_1:-62510378 Msa1205890:CDS
TCCGGCCAAGGAGAAGGCAG+TGG 0.476718 8_1:-62509820 Msa1205890:CDS
AAAGCGGTTTCACGAAAATC+GGG 0.477443 8_1:+62510302 None:intergenic
CTCATTGCCGACCTTGATTG+TGG 0.478209 8_1:+62508804 None:intergenic
GAACGGTTTGTCAAAGCATA+AGG 0.480337 8_1:-62509313 Msa1205890:CDS
AACCATCAGATGAGAGGATC+AGG 0.482736 8_1:+62506411 None:intergenic
TCATGATGATGTTACTGTTA+TGG 0.483255 8_1:-62505230 Msa1205890:CDS
TGATGGTTTGCCAAAACATA+AGG 0.483346 8_1:-62509286 Msa1205890:CDS
TAGCAATGCCAATGCAGGTT+CGG 0.483560 8_1:-62509373 Msa1205890:CDS
AATCCTGAACTTGCTTTGAT+GGG 0.486164 8_1:-62509036 Msa1205890:CDS
TTTGATGGGTTCATGTCTGT+TGG 0.486882 8_1:-62509022 Msa1205890:CDS
AATGCCAATGCAGGTTCGGC+AGG 0.487353 8_1:-62509369 Msa1205890:CDS
AATGTTCATAATGAGCTTCA+GGG 0.487722 8_1:-62509636 Msa1205890:CDS
GGGATGTATGGAAGGAAGAA+AGG 0.487873 8_1:-62509942 Msa1205890:CDS
TTGATCTTTCTGGGTCGGAT+AGG 0.489502 8_1:-62509428 Msa1205890:CDS
GGATCAGGAACTGATCCCTT+GGG 0.489833 8_1:+62506426 None:intergenic
AACCGAAGAGAAGTAGATTC+CGG 0.490054 8_1:+62510359 None:intergenic
TTACTCTCCGTTCCCACAGC+CGG 0.491950 8_1:+62509498 None:intergenic
GAAAGAAGAAAAGTCTAAGG+TGG 0.493865 8_1:-62509214 Msa1205890:CDS
TAACCCCGTTGAGGTGGAAA+AGG 0.494170 8_1:-62509577 Msa1205890:CDS
AAACCCTCTGCTTCTGGCAC+TGG 0.494612 8_1:-62509186 Msa1205890:CDS
TTCCTGATCCTCTCATCTGA+TGG 0.496445 8_1:-62506413 Msa1205890:CDS
GGTGGGGATTCCGGTGGTGT+AGG 0.497618 8_1:-62510002 Msa1205890:CDS
GAGGGAAGAAGAGTGAAGTA+AGG 0.498531 8_1:+62510662 None:intergenic
CTCCGTGCAGCCAAGAAAGC+TGG 0.499456 8_1:-62506284 Msa1205890:intron
GAAGTTGAATGATGCCGTAC+TGG 0.501042 8_1:-62506525 Msa1205890:CDS
GCACCGTTAGGAGGGATGTA+TGG 0.503783 8_1:-62509954 Msa1205890:CDS
AGATCCTGCCCCAAATGCTC+TGG 0.504656 8_1:+62508115 None:intergenic
TCTTCAATTAAATGTTGGGC+AGG 0.506729 8_1:+62506314 None:intergenic
AGTGTTAGCAATGCCAATGC+AGG 0.507381 8_1:-62509378 Msa1205890:CDS
AGAGGTTCCGGCCAAGGAGA+AGG 0.509866 8_1:-62509826 Msa1205890:CDS
GTTACGTTAGATCTTCGGCC+AGG 0.510157 8_1:-62510418 Msa1205890:CDS
GACAAAGGGGAGGGAAGCGA+GGG 0.512267 8_1:+62510644 None:intergenic
GATTCCGGTGGTGTAGGTGG+CGG 0.515125 8_1:-62509996 Msa1205890:CDS
CCAAAACATAAGGAGGGTAA+TGG 0.517060 8_1:-62509276 Msa1205890:CDS
CAGTGAAAATAGTAACGTCT+TGG 0.517578 8_1:+62510477 None:intergenic
TAGAGTTAAAGGTCGTCTTA+AGG 0.517854 8_1:-62508141 Msa1205890:CDS
TGGGGCAGGATCTTTGAAAA+GGG 0.517879 8_1:-62508105 Msa1205890:intron
CCCCGTTGAGGTGGAAAAGG+AGG 0.521172 8_1:-62509574 Msa1205890:CDS
AAATATGACAATCTGTAGCC+GGG 0.521547 8_1:-62504685 Msa1205890:three_prime_UTR
ACTGCCTGCCGAACCTGCAT+TGG 0.521699 8_1:+62509365 None:intergenic
GTGACGTACTGAAGGGAAGC+AGG 0.522740 8_1:+62506460 None:intergenic
GAAATATGACAATCTGTAGC+CGG 0.523145 8_1:-62504686 Msa1205890:three_prime_UTR
GAAGAATCTTCCGCCGCCGT+TGG 0.523536 8_1:-62510212 Msa1205890:CDS
AACTCACCACCTCTCGGCAC+AGG 0.523662 8_1:+62510098 None:intergenic
TTCAACACCGGCACCACCCA+CGG 0.524658 8_1:+62509864 None:intergenic
TACCAGCTTTCTTGGCTGCA+CGG 0.525448 8_1:+62506282 None:intergenic
GTTATGGTGATATCACTTGA+AGG 0.526658 8_1:-62505214 Msa1205890:CDS
CTTCTTTAATGCTGGTGCTG+TGG 0.526929 8_1:+62508734 None:intergenic
CAATGTGGAATCTGCAAGCA+AGG 0.527206 8_1:-62508902 Msa1205890:CDS
AATCTATGGTGACGTACTGA+AGG 0.529114 8_1:+62506452 None:intergenic
CGCCTAAGTCCAATCCGAAA+GGG 0.530408 8_1:+62510622 None:intergenic
AGTGGGCGTTAGGGAAGGCT+GGG 0.530607 8_1:-62509773 Msa1205890:CDS
ACAATCAAGGTCGGCAATGA+GGG 0.532238 8_1:-62508802 Msa1205890:CDS
TGGATATTCCGCAAGGAGAT+CGG 0.532409 8_1:-62505261 Msa1205890:CDS
GATTAACGGCGGCGCCGGTG+GGG 0.534199 8_1:-62510018 Msa1205890:CDS
CACAATCAAGGTCGGCAATG+AGG 0.534807 8_1:-62508803 Msa1205890:CDS
GTAATGTGCAGTGGGCGTTA+GGG 0.537651 8_1:-62509782 Msa1205890:CDS
AATTGGACCGGCTGTGGGAA+CGG 0.538368 8_1:-62509505 Msa1205890:CDS
GGTTTCACGAAAATCGGGTC+GGG 0.539243 8_1:+62510307 None:intergenic
ACGGGGTTATGACTCTCCAT+TGG 0.539445 8_1:+62509591 None:intergenic
GTGGTGGTTTCGGAGGAGCA+GGG 0.540974 8_1:-62509735 Msa1205890:CDS
GTCACCAGAGCATTTGGGGC+AGG 0.541067 8_1:-62508119 Msa1205890:CDS
GGAAGATCGGGTTCATGTGG+TGG 0.541143 8_1:-62509751 Msa1205890:CDS
GAATCTTCCGCCGCCGTTGG+AGG 0.542089 8_1:-62510209 Msa1205890:CDS
TGGTTTCGGAGGAGCAGGGG+TGG 0.544201 8_1:-62509731 Msa1205890:CDS
GAGGAAAGAGGTTCCGGCCA+AGG 0.544675 8_1:-62509832 Msa1205890:CDS
CTAACTCTAATTTGATATGG+TGG 0.544749 8_1:+62504653 None:intergenic
ATTACGAAACATTTCCAGTA+CGG 0.546308 8_1:+62506511 None:intergenic
GTTTCGAACCGGTTCAACAC+CGG 0.546334 8_1:-62510520 Msa1205890:CDS
TGTTGGGCAGGATCTCCGTC+TGG 0.546419 8_1:+62506326 None:intergenic
CGTAACAGAAAGAATGACCT+AGG 0.547569 8_1:+62510435 None:intergenic
GCACTGGTAGTGGTGGTGGG+AGG 0.548400 8_1:-62509170 Msa1205890:CDS
TCAAAGCATAAGGAGGGTGA+TGG 0.551649 8_1:-62509303 Msa1205890:CDS
AAGGGAAGCAGGATATGTAT+GGG 0.551727 8_1:+62506471 None:intergenic
TTACTACATCCCTAATGTGA+TGG 0.552278 8_1:-62510570 Msa1205890:exon
TACTACATCCCTAATGTGAT+GGG 0.552434 8_1:-62510569 Msa1205890:exon
TGGACTTGATCTTTCTGGGT+CGG 0.553674 8_1:-62509433 Msa1205890:CDS
CTCTATCATTGACTATGCAA+CGG 0.554400 8_1:+62508159 None:intergenic
GGAGAAGAAGCGGCCGTGGG+TGG 0.554476 8_1:-62509877 Msa1205890:CDS
CAGGTTCGGCAGGCAGTAGA+CGG 0.555129 8_1:-62509359 Msa1205890:CDS
TGACCTAGGGTTTCATCTAA+CGG 0.556271 8_1:+62510449 None:intergenic
TAGGAAGGCATTTCAACGGA+AGG 0.557068 8_1:-62509907 Msa1205890:CDS
GTCCAATCCGAAAGGGACAA+AGG 0.557390 8_1:+62510629 None:intergenic
TCAAACTGAAACCACAATCA+AGG 0.557456 8_1:-62508815 Msa1205890:CDS
TGGTGGTTTCGGAGGAGCAG+GGG 0.557886 8_1:-62509734 Msa1205890:CDS
CTTCCTTAGACATCGCAGAC+AGG 0.559147 8_1:-62504969 Msa1205890:three_prime_UTR
TGCTCAAGAAATGAGGTTGG+CGG 0.560141 8_1:-62508776 Msa1205890:CDS
ACCACAACCTCCTCCAACGG+CGG 0.560322 8_1:+62510199 None:intergenic
GAGGAGGCGGAAATTGGGTC+CGG 0.562555 8_1:-62509151 Msa1205890:CDS
ACAACCTCCTCCAACGGCGG+CGG 0.565002 8_1:+62510202 None:intergenic
CACTCTGGGCCGATTAACGG+CGG 0.566289 8_1:-62510029 Msa1205890:CDS
GAGTCATAACCCCGTTGAGG+TGG 0.567015 8_1:-62509583 Msa1205890:CDS
CTTGCTTGCAGATTCCACAT+TGG 0.567122 8_1:+62508903 None:intergenic
TCCTGATTCCCCAAATTCCA+CGG 0.568105 8_1:+62509240 None:intergenic
AAAATGTTGGTGTATATTGG+TGG 0.568578 8_1:-62504750 Msa1205890:three_prime_UTR
TACACCACCGGAATCCCCAC+CGG 0.568992 8_1:+62510004 None:intergenic
ATCCGAAAGGGACAAAGGGG+AGG 0.569112 8_1:+62510634 None:intergenic
CATTCTCGGCACCGTTAGGA+GGG 0.569173 8_1:-62509962 Msa1205890:CDS
ATCATCTTTAGGGCAATCCC+AGG 0.570116 8_1:+62505109 None:intergenic
TTGAGTTCCATCTAAAGCAA+AGG 0.574261 8_1:+62508834 None:intergenic
GAAGGAAGAAAGGTGTGTCA+GGG 0.575606 8_1:-62509932 Msa1205890:CDS
ACCAGAAATAGCTTTAAAAG+CGG 0.576874 8_1:+62510286 None:intergenic
CTAAGAACCGATTCATGAGT+AGG 0.577073 8_1:+62510332 None:intergenic
CCCGTTGAGGTGGAAAAGGA+GGG 0.577243 8_1:-62509573 Msa1205890:CDS
TGGGGAAGATCGGGTTCATG+TGG 0.578579 8_1:-62509754 Msa1205890:CDS
GGTTCATGTGGTGGTTTCGG+AGG 0.579440 8_1:-62509742 Msa1205890:CDS
AGCAAGGGAGATGTTCGTGT+TGG 0.581556 8_1:-62508886 Msa1205890:CDS
CTTCAACCTGTGCCGAGAGG+TGG 0.582633 8_1:-62510104 Msa1205890:CDS
TTCTGCTCAAGAAATGAGGT+TGG 0.583278 8_1:-62508779 Msa1205890:CDS
CGTTAGGAGGGATGTATGGA+AGG 0.583560 8_1:-62509950 Msa1205890:CDS
TCCGAAAGGGACAAAGGGGA+GGG 0.584122 8_1:+62510635 None:intergenic
ACTGAAATTGGACCGGCTGT+GGG 0.586327 8_1:-62509510 Msa1205890:CDS
TAAGGTCACCAGAGCATTTG+GGG 0.586392 8_1:-62508123 Msa1205890:CDS
CTTCCATACATCCCTCCTAA+CGG 0.586636 8_1:+62509951 None:intergenic
TGATGGGAGCTGGAGTTTCG+AGG 0.588110 8_1:-62510553 Msa1205890:CDS
AGGGTTCTGCTCAAGAAATG+AGG 0.591211 8_1:-62508783 Msa1205890:CDS
TTCGGAGAAGAAGCGGCCGT+GGG 0.593745 8_1:-62509880 Msa1205890:CDS
CGGTTTCACGAAAATCGGGT+CGG 0.594346 8_1:+62510306 None:intergenic
TCTTCCGCCACCTACACCAC+CGG 0.595356 8_1:+62509992 None:intergenic
TGTGCAGTGGGCGTTAGGGA+AGG 0.596261 8_1:-62509778 Msa1205890:CDS
AACATAAGGAGGGTAATGGT+AGG 0.596849 8_1:-62509272 Msa1205890:CDS
AGGGAAGAAGAGTGAAGTAA+GGG 0.598427 8_1:+62510663 None:intergenic
TTGTTTGTTGGGATTTACGA+CGG 0.599779 8_1:-62509708 Msa1205890:CDS
TTGGGAACTTGATGAACCAA+TGG 0.600194 8_1:-62509607 Msa1205890:CDS
GGCCAAGGAGAAGGCAGTGG+AGG 0.600282 8_1:-62509817 Msa1205890:CDS
AGTACGGCATCATTCAACTT+CGG 0.600363 8_1:+62506527 None:intergenic
ATCTATGGTGACGTACTGAA+GGG 0.601252 8_1:+62506453 None:intergenic
GTGCGCACTCTCAATCGGAC+CGG 0.602532 8_1:+62510049 None:intergenic
CGGTTTGTCAAAGCATAAGG+AGG 0.603543 8_1:-62509310 Msa1205890:CDS
GCTTCTGGCACTGGTAGTGG+TGG 0.603968 8_1:-62509177 Msa1205890:CDS
TGGTTTGCCAAAACATAAGG+AGG 0.605933 8_1:-62509283 Msa1205890:CDS
CCGCCTAAGTCCAATCCGAA+AGG 0.607046 8_1:+62510621 None:intergenic
GCCACCACAACCTCCTCCAA+CGG 0.608052 8_1:+62510196 None:intergenic
TTCCGGTGAGAGAAAGCGAT+CGG 0.608311 8_1:+62510376 None:intergenic
GGCTGAGCCAAGTAAAATGT+TGG 0.608434 8_1:-62504763 Msa1205890:three_prime_UTR
ACTTGCGTATTTGGATATGA+CGG 0.608770 8_1:-62509076 Msa1205890:CDS
ACTACCAGTGCCAGAAGCAG+AGG 0.609229 8_1:+62509182 None:intergenic
AAAACCAAATCATGATCCAC+CGG 0.609288 8_1:+62509132 None:intergenic
CTCCCAACAAAATTCAACAC+CGG 0.609475 8_1:+62509852 None:intergenic
AGAAAGCGATCGGAGTGAGT+CGG 0.611067 8_1:+62510386 None:intergenic
AGTTGTTACCGTGGAATTTG+GGG 0.613438 8_1:-62509248 Msa1205890:CDS
ACAACAGACTGAAATTGGAC+CGG 0.613451 8_1:-62509517 Msa1205890:CDS
GCCGTTGGAGGAGGTTGTGG+TGG 0.613965 8_1:-62510197 Msa1205890:CDS
AAATGTTGGTGTATATTGGT+GGG 0.615835 8_1:-62504749 Msa1205890:three_prime_UTR
AGGTGTCTTCGGAGAAGAAG+CGG 0.621311 8_1:-62509887 Msa1205890:CDS
CCTCTCGGCACAGGTTGAAG+CGG 0.626602 8_1:+62510107 None:intergenic
TTCATGGAAAAGTTTCCAGA+CGG 0.626955 8_1:-62506341 Msa1205890:CDS
TATGAGCCCAAGGAGGATCA+GGG 0.626958 8_1:-62508931 Msa1205890:CDS
CCTTTCGGATTGGACTTAGG+CGG 0.628350 8_1:-62510621 Msa1205890:five_prime_UTR
TTGCTGTCCAGACTGAAGAA+CGG 0.628481 8_1:-62509330 Msa1205890:CDS
AGGTGTGTCAGGGTTTAGGA+AGG 0.628635 8_1:-62509922 Msa1205890:CDS
ATATGGTGGAAATCCACCCC+CGG 0.628895 8_1:+62504667 None:intergenic
TACTTCCTCCGATCTCCTTG+CGG 0.628898 8_1:+62505253 None:intergenic
GAGGCGGAAATTGGGTCCGG+TGG 0.633186 8_1:-62509148 Msa1205890:CDS
TGTAGCACATTATGAGCCCA+AGG 0.633891 8_1:-62508941 Msa1205890:CDS
AATGTTGGTGTATATTGGTG+GGG 0.633998 8_1:-62504748 Msa1205890:three_prime_UTR
GTGGGCGTTAGGGAAGGCTG+GGG 0.638967 8_1:-62509772 Msa1205890:CDS
GGTTTAGGAAGGCATTTCAA+CGG 0.639426 8_1:-62509911 Msa1205890:CDS
GTGAGTCGGAGAAAGAAACC+TGG 0.642081 8_1:+62510400 None:intergenic
ATCTTTAGGGCAATCCCAGG+TGG 0.642322 8_1:+62505112 None:intergenic
TTAGGAGATTCAAAATGGAG+AGG 0.643307 8_1:-62504634 Msa1205890:three_prime_UTR
GAACGGAGAGTAAACGGCGT+AGG 0.647260 8_1:-62509488 Msa1205890:CDS
GAACCGTTAGATGAAACCCT+AGG 0.650582 8_1:-62510452 Msa1205890:CDS
AATGTGGAATCTGCAAGCAA+GGG 0.652423 8_1:-62508901 Msa1205890:CDS
AAATGAGAGTAATGTGCAGT+GGG 0.653248 8_1:-62509790 Msa1205890:CDS
GATACAAACCATCAGATGAG+AGG 0.653579 8_1:+62506405 None:intergenic
GTAACAGAAAGAATGACCTA+GGG 0.653602 8_1:+62510436 None:intergenic
GTCACCATAGATTAAGCCCA+AGG 0.654258 8_1:-62506442 Msa1205890:CDS
GGCGCCGGTGGGGATTCCGG+TGG 0.657142 8_1:-62510008 Msa1205890:CDS
AATATGACAATCTGTAGCCG+GGG 0.659107 8_1:-62504684 Msa1205890:three_prime_UTR
GTTCGGCAGGCAGTAGACGG+TGG 0.661155 8_1:-62509356 Msa1205890:CDS
ACTGAAACCACAATCAAGGT+CGG 0.661842 8_1:-62508811 Msa1205890:CDS
TCACCATAGATTAAGCCCAA+GGG 0.662089 8_1:-62506441 Msa1205890:CDS
GGAGAGTCATAACCCCGTTG+AGG 0.669683 8_1:-62509586 Msa1205890:CDS
GAAGAATCTGGAAATCGTCA+GGG 0.671865 8_1:-62505192 Msa1205890:CDS
CTACCAGTGCCAGAAGCAGA+GGG 0.672046 8_1:+62509183 None:intergenic
CCGCTTCAACCTGTGCCGAG+AGG 0.673541 8_1:-62510107 Msa1205890:CDS
GAATTGCTGGATATTCCGCA+AGG 0.675248 8_1:-62505268 Msa1205890:CDS
GGTTTGCCAAAACATAAGGA+GGG 0.677723 8_1:-62509282 Msa1205890:CDS
ATGGTAGGAAGTTGTTACCG+TGG 0.680126 8_1:-62509257 Msa1205890:CDS
GGTTTGTCAAAGCATAAGGA+GGG 0.688138 8_1:-62509309 Msa1205890:CDS
CAGCTTTCTTGGCTGCACGG+AGG 0.689514 8_1:+62506285 None:intergenic
ACGGGTGCGGAAATGGTGAA+CGG 0.689905 8_1:+62504885 None:intergenic
AGGGAAGCAGGATATGTATG+GGG 0.690908 8_1:+62506472 None:intergenic
ATATTCCGCAAGGAGATCGG+AGG 0.695322 8_1:-62505258 Msa1205890:CDS
CCAATCCGAAAGGGACAAAG+GGG 0.695723 8_1:+62510631 None:intergenic
GGATCAGGGTACTTCCAATG+TGG 0.706383 8_1:-62508917 Msa1205890:CDS
ATATGACAATCTGTAGCCGG+GGG 0.713147 8_1:-62504683 Msa1205890:three_prime_UTR
GAAGCTCATTATGAACATTG+CGG 0.714210 8_1:+62509640 None:intergenic
AAAATGAGAGTAATGTGCAG+TGG 0.715636 8_1:-62509791 Msa1205890:CDS
TGTGTATGTTATGAATGTTG+GGG 0.751518 8_1:-62508977 Msa1205890:CDS
AGCACATTATGAGCCCAAGG+AGG 0.756620 8_1:-62508938 Msa1205890:CDS
TCGTCAGGGAAATATCTGTG+AGG 0.770882 8_1:-62505178 Msa1205890:exon
CTATCATTGACTATGCAACG+GGG 0.777249 8_1:+62508161 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTATTTTTTTGC+AGG - chr8_1:62507125-62507144 Msa1205890:intron 10.0%
!! AATGTAAAATCAAAATAGAA+AGG - chr8_1:62507673-62507692 Msa1205890:intron 15.0%
!! TATTATATATATTAGAAGAG+TGG - chr8_1:62508261-62508280 Msa1205890:intron 15.0%
!!! ACACATTTTAATAGAAAAAA+AGG + chr8_1:62509313-62509332 None:intergenic 15.0%
!!! TAAATTTTATATCACTTCAT+AGG - chr8_1:62509521-62509540 Msa1205890:CDS 15.0%
!!! TCATTTATAGATAATGTTTT+AGG - chr8_1:62509962-62509981 Msa1205890:CDS 15.0%
!!! AAGCTTAATTTTGAATTTGT+AGG - chr8_1:62506634-62506653 Msa1205890:intron 20.0%
!!! ACAGATGAAATTTATGATTT+TGG - chr8_1:62506903-62506922 Msa1205890:intron 20.0%
!!! TTTTTAAGTTTCTGTAGTTA+TGG - chr8_1:62507030-62507049 Msa1205890:intron 20.0%
!! ATTAAAACAAAATGTTTCAG+TGG + chr8_1:62507495-62507514 None:intergenic 20.0%
!!! TTAAAGTTGTATTTTTCTGT+AGG + chr8_1:62507893-62507912 None:intergenic 20.0%
!! CAGAAAAATACAACTTTAAA+AGG - chr8_1:62507894-62507913 Msa1205890:intron 20.0%
!! ATTTAAGAAAATGTGATAAG+CGG - chr8_1:62508401-62508420 Msa1205890:intron 20.0%
!! TTCTAATATTGAGTTTCATA+TGG - chr8_1:62508510-62508529 Msa1205890:intron 20.0%
!! ATGTTTCGTAATGAATTTAT+TGG - chr8_1:62508844-62508863 Msa1205890:CDS 20.0%
!! TGTAAAACAAAAGATACAAA+AGG + chr8_1:62509103-62509122 None:intergenic 20.0%
!! AAAGACAACATAATTATTTG+AGG + chr8_1:62509345-62509364 None:intergenic 20.0%
!!! TCTAGATTATTTCTTAAATC+TGG - chr8_1:62509547-62509566 Msa1205890:CDS 20.0%
!!! CTAGATTATTTCTTAAATCT+GGG - chr8_1:62509548-62509567 Msa1205890:CDS 20.0%
!!! TTTTGCAATAATCAAGAAAT+CGG + chr8_1:62509584-62509603 None:intergenic 20.0%
!!! TTTTGTTTGGTTCTTTTAAT+TGG - chr8_1:62509715-62509734 Msa1205890:CDS 20.0%
!!! TTTGTTTGGTTTTTGTAAAT+TGG - chr8_1:62509849-62509868 Msa1205890:CDS 20.0%
!! TATAATAACTGCAAAAAAGA+TGG + chr8_1:62510485-62510504 None:intergenic 20.0%
!!! GATGTAGTAATTTTGTTTTC+CGG + chr8_1:62504764-62504783 None:intergenic 25.0%
! ATTTACAATATTACCCTTAC+CGG + chr8_1:62505184-62505203 None:intergenic 25.0%
! ATGTGTATGTTATGAATGTT+GGG - chr8_1:62506366-62506385 Msa1205890:CDS 25.0%
!!! TACTTCACTTTTGTCAATTT+TGG - chr8_1:62506683-62506702 Msa1205890:intron 25.0%
!! ACTTAGCAAAAAGTATACAA+TGG + chr8_1:62506829-62506848 None:intergenic 25.0%
! ATAGTCAATGATAGAGTTAA+AGG - chr8_1:62507192-62507211 Msa1205890:intron 25.0%
! AACAACACTACTATAGAAAT+TGG + chr8_1:62507380-62507399 None:intergenic 25.0%
! ATTGAAAACTCAAATTTGGT+CGG + chr8_1:62507714-62507733 None:intergenic 25.0%
! TGAGATTGAAAACTCAAATT+TGG + chr8_1:62507718-62507737 None:intergenic 25.0%
! TAACTACTATTCATTTCTGT+GGG + chr8_1:62508050-62508069 None:intergenic 25.0%
! TTAACTACTATTCATTTCTG+TGG + chr8_1:62508051-62508070 None:intergenic 25.0%
! ATAACCGTTTATTTGCATAT+AGG + chr8_1:62508383-62508402 None:intergenic 25.0%
! AAACAAACACATCCAAAATT+TGG + chr8_1:62509234-62509253 None:intergenic 25.0%
!!! AAGAACTGTCTTTTAAAGAA+AGG + chr8_1:62509475-62509494 None:intergenic 25.0%
!!! TTTGTATCCATTGTTTTGTT+TGG - chr8_1:62509702-62509721 Msa1205890:CDS 25.0%
! AAAAGAACCAAACAAAACAA+TGG + chr8_1:62509712-62509731 None:intergenic 25.0%
!! TTTATATTCATGGGTTTGTT+TGG - chr8_1:62509835-62509854 Msa1205890:CDS 25.0%
!! TTTTTCTTTCTTTCTTCCTT+TGG - chr8_1:62510560-62510579 Msa1205890:exon 25.0%
!! ATATACACCAACATTTTACT+TGG + chr8_1:62510591-62510610 None:intergenic 25.0%
! AGTAAAATGTTGGTGTATAT+TGG - chr8_1:62510591-62510610 Msa1205890:five_prime_UTR 25.0%
TTTCTGTTACGTTAGATCTT+CGG - chr8_1:62504921-62504940 Msa1205890:three_prime_UTR 30.0%
!! ACCAGAAATAGCTTTAAAAG+CGG + chr8_1:62505061-62505080 None:intergenic 30.0%
! TAATAGTTCTGTTCCGAAAA+CGG - chr8_1:62505095-62505114 Msa1205890:three_prime_UTR 30.0%
! TCTAACTGAATAACCGTTTT+CGG + chr8_1:62505111-62505130 None:intergenic 30.0%
GGTAAGGGTAATATTGTAAA+TGG - chr8_1:62505183-62505202 Msa1205890:CDS 30.0%
AATGTTCATAATGAGCTTCA+GGG - chr8_1:62505708-62505727 Msa1205890:intron 30.0%
AGAGAAAGAAGAAAAGTCTA+AGG - chr8_1:62506127-62506146 Msa1205890:intron 30.0%
GATGTGTATGTTATGAATGT+TGG - chr8_1:62506365-62506384 Msa1205890:CDS 30.0%
TGTGTATGTTATGAATGTTG+GGG - chr8_1:62506367-62506386 Msa1205890:CDS 30.0%
TAAGCTTACTTCTTTAATGC+TGG + chr8_1:62506621-62506640 None:intergenic 30.0%
AAGCATTTCAGTTCACAAAA+AGG + chr8_1:62506660-62506679 None:intergenic 30.0%
TGCATATACCAACTCAATTA+TGG + chr8_1:62506804-62506823 None:intergenic 30.0%
TCATAAATTTCATCTGTAGC+TGG + chr8_1:62506900-62506919 None:intergenic 30.0%
! TGGAATATACAGTATTGAGA+TGG - chr8_1:62506923-62506942 Msa1205890:intron 30.0%
TTTGTAGTGATACATTCAAC+AGG - chr8_1:62506951-62506970 Msa1205890:intron 30.0%
!! TGTTATTTCTATCTGAAGGA+AGG + chr8_1:62507355-62507374 None:intergenic 30.0%
!! GGTATGTTATTTCTATCTGA+AGG + chr8_1:62507359-62507378 None:intergenic 30.0%
ACAGATAATCAACACAAACT+CGG + chr8_1:62507433-62507452 None:intergenic 30.0%
!! TGTGTTGATTATCTGTTTGA+TGG - chr8_1:62507437-62507456 Msa1205890:intron 30.0%
TATCTGTTTGATGGAAATCA+AGG - chr8_1:62507446-62507465 Msa1205890:intron 30.0%
! GATTTTACATTCCTTTTCTC+TGG + chr8_1:62507664-62507683 None:intergenic 30.0%
TTAAGGAAAAAGAGTTCATC+TGG - chr8_1:62507852-62507871 Msa1205890:intron 30.0%
! GTTGTATTTTTCTGTAGGTT+GGG + chr8_1:62507888-62507907 None:intergenic 30.0%
! AGTTGTATTTTTCTGTAGGT+TGG + chr8_1:62507889-62507908 None:intergenic 30.0%
! TTCATTTTCGTAAAAGCCTA+AGG + chr8_1:62507949-62507968 None:intergenic 30.0%
AACTACTATTCATTTCTGTG+GGG + chr8_1:62508049-62508068 None:intergenic 30.0%
!! TATTCCCACTTAGTTTGTTA+AGG - chr8_1:62508135-62508154 Msa1205890:CDS 30.0%
AGTGCCTATATGCAAATAAA+CGG - chr8_1:62508376-62508395 Msa1205890:intron 30.0%
ACAAATCTTGTCTAACATGA+TGG - chr8_1:62508773-62508792 Msa1205890:CDS 30.0%
ATTACGAAACATTTCCAGTA+CGG + chr8_1:62508836-62508855 None:intergenic 30.0%
CAGCTCTTCAATTAAATGTT+GGG + chr8_1:62509037-62509056 None:intergenic 30.0%
!! GACATACACAATTTGTTGAA+TGG - chr8_1:62509132-62509151 Msa1205890:CDS 30.0%
! TGTATCATTGTGCCAAATTT+TGG - chr8_1:62509219-62509238 Msa1205890:CDS 30.0%
TAATAGAAAAAAAGGCCACA+GGG + chr8_1:62509305-62509324 None:intergenic 30.0%
TTAATAGAAAAAAAGGCCAC+AGG + chr8_1:62509306-62509325 None:intergenic 30.0%
TTCGTCTGCATTTATATTCA+TGG - chr8_1:62509825-62509844 Msa1205890:CDS 30.0%
TCGTCTGCATTTATATTCAT+GGG - chr8_1:62509826-62509845 Msa1205890:CDS 30.0%
! CTAACTTTTCATTCTGTCTT+AGG - chr8_1:62509893-62509912 Msa1205890:CDS 30.0%
! TTTTCATTCTGTCTTAGGAT+GGG - chr8_1:62509898-62509917 Msa1205890:CDS 30.0%
ATTAGAGAATTCTGTAAGAG+TGG - chr8_1:62510013-62510032 Msa1205890:CDS 30.0%
!! AATGGATTTTCATGAATTGC+TGG - chr8_1:62510063-62510082 Msa1205890:CDS 30.0%
! TCATGATGATGTTACTGTTA+TGG - chr8_1:62510114-62510133 Msa1205890:CDS 30.0%
AAGCTATGACATCATCTTTA+GGG + chr8_1:62510248-62510267 None:intergenic 30.0%
AATTCCAGATCCATGAAAAA+TGG + chr8_1:62510281-62510300 None:intergenic 30.0%
CAACAAAAAAGTTAACTCCT+AGG - chr8_1:62510313-62510332 Msa1205890:CDS 30.0%
! CATTAAAATCTGAGATTCCT+AGG + chr8_1:62510333-62510352 None:intergenic 30.0%
! CTAGGAATCTCAGATTTTAA+TGG - chr8_1:62510331-62510350 Msa1205890:CDS 30.0%
! GGCTTATGGAAATTTTCTTT+AGG - chr8_1:62510396-62510415 Msa1205890:CDS 30.0%
ATAACTGCAAAAAAGATGGA+CGG + chr8_1:62510481-62510500 None:intergenic 30.0%
AAAATGTTGGTGTATATTGG+TGG - chr8_1:62510594-62510613 Msa1205890:five_prime_UTR 30.0%
AAATGTTGGTGTATATTGGT+GGG - chr8_1:62510595-62510614 Msa1205890:five_prime_UTR 30.0%
!! TACAAGTGTACTGATTTAAC+TGG - chr8_1:62510620-62510639 Msa1205890:five_prime_UTR 30.0%
CTAACTCTAATTTGATATGG+TGG + chr8_1:62510694-62510713 None:intergenic 30.0%
CACCATATCAAATTAGAGTT+AGG - chr8_1:62510692-62510711 Msa1205890:five_prime_UTR 30.0%
CTCCTAACTCTAATTTGATA+TGG + chr8_1:62510697-62510716 None:intergenic 30.0%
TAGAGTTAGGAGATTCAAAA+TGG - chr8_1:62510705-62510724 Msa1205890:five_prime_UTR 30.0%
TTACTACATCCCTAATGTGA+TGG - chr8_1:62504774-62504793 Msa1205890:three_prime_UTR 35.0%
TACTACATCCCTAATGTGAT+GGG - chr8_1:62504775-62504794 Msa1205890:three_prime_UTR 35.0%
!!! TGTCGGTTTTTTTGTTGTTC+CGG + chr8_1:62504846-62504865 None:intergenic 35.0%
AATAGTAACGTCTTGGTTGT+CGG + chr8_1:62504863-62504882 None:intergenic 35.0%
CAGTGAAAATAGTAACGTCT+TGG + chr8_1:62504870-62504889 None:intergenic 35.0%
GTAACAGAAAGAATGACCTA+GGG + chr8_1:62504911-62504930 None:intergenic 35.0%
! GTTTTCACCTACTCATGAAT+CGG - chr8_1:62505005-62505024 Msa1205890:three_prime_UTR 35.0%
AAAAGCGGTTTCACGAAAAT+CGG + chr8_1:62505046-62505065 None:intergenic 35.0%
!!! ACCGCTTTTAAAGCTATTTC+TGG - chr8_1:62505057-62505076 Msa1205890:three_prime_UTR 35.0%
AAAATGAGAGTAATGTGCAG+TGG - chr8_1:62505553-62505572 Msa1205890:intron 35.0%
AAATGAGAGTAATGTGCAGT+GGG - chr8_1:62505554-62505573 Msa1205890:intron 35.0%
! TTGTTTGTTGGGATTTACGA+CGG - chr8_1:62505636-62505655 Msa1205890:intron 35.0%
GAAGCTCATTATGAACATTG+CGG + chr8_1:62505707-62505726 None:intergenic 35.0%
CAATGTTCATAATGAGCTTC+AGG - chr8_1:62505707-62505726 Msa1205890:intron 35.0%
! AGAAAATTCAGGTTCTGGTT+TGG - chr8_1:62505794-62505813 Msa1205890:intron 35.0%
ATGGTACAACAGACTGAAAT+TGG - chr8_1:62505822-62505841 Msa1205890:intron 35.0%
! AAGATGGACTTGATCTTTCT+GGG - chr8_1:62505907-62505926 Msa1205890:intron 35.0%
! TGATGGTTTGCCAAAACATA+AGG - chr8_1:62506058-62506077 Msa1205890:intron 35.0%
AAGTTGTTACCGTGGAATTT+GGG - chr8_1:62506095-62506114 Msa1205890:intron 35.0%
GAAAGAAGAAAAGTCTAAGG+TGG - chr8_1:62506130-62506149 Msa1205890:intron 35.0%
AAAACCAAATCATGATCCAC+CGG + chr8_1:62506215-62506234 None:intergenic 35.0%
ACTTGCGTATTTGGATATGA+CGG - chr8_1:62506268-62506287 Msa1205890:intron 35.0%
! AAATCCTGAACTTGCTTTGA+TGG - chr8_1:62506307-62506326 Msa1205890:CDS 35.0%
! AATCCTGAACTTGCTTTGAT+GGG - chr8_1:62506308-62506327 Msa1205890:CDS 35.0%
!!! TCTGTTGGTTGTTTTGATGA+GGG - chr8_1:62506337-62506356 Msa1205890:CDS 35.0%
! TTGAGTTCCATCTAAAGCAA+AGG + chr8_1:62506513-62506532 None:intergenic 35.0%
TCAAACTGAAACCACAATCA+AGG - chr8_1:62506529-62506548 Msa1205890:CDS 35.0%
AGGCAACAATTGAAATGATG+AGG + chr8_1:62506732-62506751 None:intergenic 35.0%
TCATCATTTCAATTGTTGCC+TGG - chr8_1:62506731-62506750 Msa1205890:intron 35.0%
CAAACTCAAGAAGTTAAACC+AGG + chr8_1:62506752-62506771 None:intergenic 35.0%
TAAACAGTTCACAACATGAC+AGG + chr8_1:62507079-62507098 None:intergenic 35.0%
! TCTATCATTGACTATGCAAC+GGG + chr8_1:62507187-62507206 None:intergenic 35.0%
! CTCTATCATTGACTATGCAA+CGG + chr8_1:62507188-62507207 None:intergenic 35.0%
TAGAGTTAAAGGTCGTCTTA+AGG - chr8_1:62507203-62507222 Msa1205890:intron 35.0%
ATTTGAATAAAACGTGCACC+TGG - chr8_1:62507513-62507532 Msa1205890:intron 35.0%
! TACATTCCTTTTCTCTGGTT+TGG + chr8_1:62507659-62507678 None:intergenic 35.0%
GAAGTGGTATGTAAGACATT+GGG + chr8_1:62507816-62507835 None:intergenic 35.0%
AGAAGTGGTATGTAAGACAT+TGG + chr8_1:62507817-62507836 None:intergenic 35.0%
TCTTACATACCACTTCTGTT+AGG - chr8_1:62507820-62507839 Msa1205890:intron 35.0%
! TAAAAGCCTAAGGTACTCAA+AGG + chr8_1:62507939-62507958 None:intergenic 35.0%
CAAGCCTTAACAAACTAAGT+GGG + chr8_1:62508142-62508161 None:intergenic 35.0%
TTCTCAGTCAGAATTGAAAG+AGG - chr8_1:62508615-62508634 Msa1205890:intron 35.0%
TGATTATGAAGTCATGTGAC+AGG + chr8_1:62508653-62508672 None:intergenic 35.0%
TTCATGGAAAAGTTTCCAGA+CGG - chr8_1:62509003-62509022 Msa1205890:CDS 35.0%
TCTTCAATTAAATGTTGGGC+AGG + chr8_1:62509033-62509052 None:intergenic 35.0%
GCAGCTCTTCAATTAAATGT+TGG + chr8_1:62509038-62509057 None:intergenic 35.0%
ATCCAATTTACCAGCTTTCT+TGG + chr8_1:62509073-62509092 None:intergenic 35.0%
ACAGTGAAAGAATAAACTGC+TGG - chr8_1:62509267-62509286 Msa1205890:CDS 35.0%
! CATAATTATTTGAGGCTCTG+AGG + chr8_1:62509337-62509356 None:intergenic 35.0%
!!! TTGATTCTAGAGTTTTGCTG+AGG - chr8_1:62509639-62509658 Msa1205890:CDS 35.0%
TGAGGTGACAGTGTTAATTT+GGG - chr8_1:62509657-62509676 Msa1205890:CDS 35.0%
! CTTTTCATTTTGCCTGAGTT+TGG - chr8_1:62509765-62509784 Msa1205890:CDS 35.0%
!! CAAGTTAAAAAGTGCCATCT+CGG + chr8_1:62509791-62509810 None:intergenic 35.0%
!!! GAGATGGCACTTTTTAACTT+GGG - chr8_1:62509790-62509809 Msa1205890:CDS 35.0%
! CTTTTCATTCTGTCTTAGGA+TGG - chr8_1:62509897-62509916 Msa1205890:CDS 35.0%
TTTCATTCTGTCTTAGGATG+GGG - chr8_1:62509899-62509918 Msa1205890:CDS 35.0%
GTTATGGTGATATCACTTGA+AGG - chr8_1:62510130-62510149 Msa1205890:CDS 35.0%
TATCACTTGAAGGAAGAATC+TGG - chr8_1:62510140-62510159 Msa1205890:CDS 35.0%
! TGACAACAATTTTTCCACCT+GGG - chr8_1:62510218-62510237 Msa1205890:CDS 35.0%
GAAGCTATGACATCATCTTT+AGG + chr8_1:62510249-62510268 None:intergenic 35.0%
!! TGATCCATTTTTCATGGATC+TGG - chr8_1:62510274-62510293 Msa1205890:CDS 35.0%
!!! AACTTTTTTGTTGCAACACC+AGG + chr8_1:62510306-62510325 None:intergenic 35.0%
!! TCTCAGATTTTAATGGCAAG+AGG - chr8_1:62510338-62510357 Msa1205890:CDS 35.0%
! ATGGAAATTTTCTTTAGGCG+TGG - chr8_1:62510401-62510420 Msa1205890:CDS 35.0%
TAACTGCAAAAAAGATGGAC+GGG + chr8_1:62510480-62510499 None:intergenic 35.0%
! ATAGAAATTTTGCACAGCGA+AGG - chr8_1:62510516-62510535 Msa1205890:CDS 35.0%
AATGTTGGTGTATATTGGTG+GGG - chr8_1:62510596-62510615 Msa1205890:five_prime_UTR 35.0%
GAAATATGACAATCTGTAGC+CGG - chr8_1:62510658-62510677 Msa1205890:five_prime_UTR 35.0%
AAATATGACAATCTGTAGCC+GGG - chr8_1:62510659-62510678 Msa1205890:five_prime_UTR 35.0%
TTAGGAGATTCAAAATGGAG+AGG - chr8_1:62510710-62510729 Msa1205890:five_prime_UTR 35.0%
AGGGAAGAAGAGTGAAGTAA+GGG + chr8_1:62504684-62504703 None:intergenic 40.0%
! GTTGTGTTCTTGTTTCGAAC+CGG - chr8_1:62504813-62504832 Msa1205890:three_prime_UTR 40.0%
TGACCTAGGGTTTCATCTAA+CGG + chr8_1:62504898-62504917 None:intergenic 40.0%
CGTAACAGAAAGAATGACCT+AGG + chr8_1:62504912-62504931 None:intergenic 40.0%
AACCGAAGAGAAGTAGATTC+CGG + chr8_1:62504988-62505007 None:intergenic 40.0%
! CTAAGAACCGATTCATGAGT+AGG + chr8_1:62505015-62505034 None:intergenic 40.0%
AAAGCGGTTTCACGAAAATC+GGG + chr8_1:62505045-62505064 None:intergenic 40.0%
TCAAAAAACTCACCACCTCT+CGG + chr8_1:62505255-62505274 None:intergenic 40.0%
!!! AGAGGTGGTGAGTTTTTTGA+GGG - chr8_1:62505255-62505274 Msa1205890:CDS 40.0%
!! GGTTTAGGAAGGCATTTCAA+CGG - chr8_1:62505433-62505452 Msa1205890:intron 40.0%
!! ATTTCAACGGAAGGTGTCTT+CGG - chr8_1:62505446-62505465 Msa1205890:intron 40.0%
!! TGCCGGTGTTGAATTTTGTT+GGG - chr8_1:62505490-62505509 Msa1205890:intron 40.0%
CTCCCAACAAAATTCAACAC+CGG + chr8_1:62505495-62505514 None:intergenic 40.0%
! GAATTTTGTTGGGAGGAAAG+AGG - chr8_1:62505500-62505519 Msa1205890:intron 40.0%
!! GGGATTTACGACGGTTTTAA+TGG - chr8_1:62505645-62505664 Msa1205890:intron 40.0%
!! TTACGACGGTTTTAATGGAC+CGG - chr8_1:62505650-62505669 Msa1205890:intron 40.0%
ATCAAAAACTCAGGTGCATC+CGG + chr8_1:62505672-62505691 None:intergenic 40.0%
! GATGCACCTGAGTTTTTGAT+GGG - chr8_1:62505672-62505691 Msa1205890:intron 40.0%
! ATGCACCTGAGTTTTTGATG+GGG - chr8_1:62505673-62505692 Msa1205890:intron 40.0%
ATATGCCCCATCAAAAACTC+AGG + chr8_1:62505681-62505700 None:intergenic 40.0%
!! ATGAGCTTCAGGGTTTGTTT+TGG - chr8_1:62505718-62505737 Msa1205890:intron 40.0%
!! TGAGCTTCAGGGTTTGTTTT+GGG - chr8_1:62505719-62505738 Msa1205890:intron 40.0%
TTGGGAACTTGATGAACCAA+TGG - chr8_1:62505737-62505756 Msa1205890:intron 40.0%
GAAAAGGAGGGAGAAAATTC+AGG - chr8_1:62505783-62505802 Msa1205890:intron 40.0%
!! AGGTTCTGGTTTGGTGAATA+TGG - chr8_1:62505803-62505822 Msa1205890:intron 40.0%
ACAACAGACTGAAATTGGAC+CGG - chr8_1:62505827-62505846 Msa1205890:intron 40.0%
GAAAGATCAAGTCCATCTTC+AGG + chr8_1:62505906-62505925 None:intergenic 40.0%
! GAAGATGGACTTGATCTTTC+TGG - chr8_1:62505906-62505925 Msa1205890:intron 40.0%
GAACGGTTTGTCAAAGCATA+AGG - chr8_1:62506031-62506050 Msa1205890:intron 40.0%
GGTTTGTCAAAGCATAAGGA+GGG - chr8_1:62506035-62506054 Msa1205890:intron 40.0%
! TGGTTTGCCAAAACATAAGG+AGG - chr8_1:62506061-62506080 Msa1205890:intron 40.0%
GGTTTGCCAAAACATAAGGA+GGG - chr8_1:62506062-62506081 Msa1205890:intron 40.0%
! CCATTACCCTCCTTATGTTT+TGG + chr8_1:62506071-62506090 None:intergenic 40.0%
CCAAAACATAAGGAGGGTAA+TGG - chr8_1:62506068-62506087 Msa1205890:intron 40.0%
! AACATAAGGAGGGTAATGGT+AGG - chr8_1:62506072-62506091 Msa1205890:intron 40.0%
GAAGTTGTTACCGTGGAATT+TGG - chr8_1:62506094-62506113 Msa1205890:intron 40.0%
AGTTGTTACCGTGGAATTTG+GGG - chr8_1:62506096-62506115 Msa1205890:intron 40.0%
!!! TGGTTTTGAATGCAATGTCG+CGG - chr8_1:62506228-62506247 Msa1205890:intron 40.0%
AGTGACAGAACTTGCGTATT+TGG - chr8_1:62506259-62506278 Msa1205890:intron 40.0%
!! TTTGATGGGTTCATGTCTGT+TGG - chr8_1:62506322-62506341 Msa1205890:CDS 40.0%
!!! GTCTGTTGGTTGTTTTGATG+AGG - chr8_1:62506336-62506355 Msa1205890:CDS 40.0%
AATGTGGAATCTGCAAGCAA+GGG - chr8_1:62506443-62506462 Msa1205890:CDS 40.0%
! GAAGAGTCCTTTGCTTTAGA+TGG - chr8_1:62506503-62506522 Msa1205890:CDS 40.0%
ACTGAAACCACAATCAAGGT+CGG - chr8_1:62506533-62506552 Msa1205890:intron 40.0%
TTCTGCTCAAGAAATGAGGT+TGG - chr8_1:62506565-62506584 Msa1205890:intron 40.0%
GTGTGTGTCCATAATTGAGT+TGG - chr8_1:62506793-62506812 Msa1205890:intron 40.0%
GCTAAGTGCATTGTATTCCT+AGG - chr8_1:62506842-62506861 Msa1205890:intron 40.0%
AAGTGCATTGTATTCCTAGG+AGG - chr8_1:62506845-62506864 Msa1205890:intron 40.0%
AGTGCATTGTATTCCTAGGA+GGG - chr8_1:62506846-62506865 Msa1205890:intron 40.0%
! CTATCATTGACTATGCAACG+GGG + chr8_1:62507186-62507205 None:intergenic 40.0%
! TTAAGGTCACCAGAGCATTT+GGG - chr8_1:62507220-62507239 Msa1205890:intron 40.0%
TATCTGAAGGAAGGAGAGAA+TGG + chr8_1:62507346-62507365 None:intergenic 40.0%
AAGATTGCTGGAATAGAGAG+AGG + chr8_1:62507763-62507782 None:intergenic 40.0%
CTGTTAGGTCTACTAGGTTA+AGG - chr8_1:62507835-62507854 Msa1205890:intron 40.0%
CCAAGCCTTAACAAACTAAG+TGG + chr8_1:62508143-62508162 None:intergenic 40.0%
!! CCACTTAGTTTGTTAAGGCT+TGG - chr8_1:62508140-62508159 Msa1205890:CDS 40.0%
TCTGACTGAGAATGCAAAAG+AGG + chr8_1:62508607-62508626 None:intergenic 40.0%
AGTACGGCATCATTCAACTT+CGG + chr8_1:62508820-62508839 None:intergenic 40.0%
AAGGGAAGCAGGATATGTAT+GGG + chr8_1:62508876-62508895 None:intergenic 40.0%
! ATCTATGGTGACGTACTGAA+GGG + chr8_1:62508894-62508913 None:intergenic 40.0%
! AATCTATGGTGACGTACTGA+AGG + chr8_1:62508895-62508914 None:intergenic 40.0%
TCACCATAGATTAAGCCCAA+GGG - chr8_1:62508903-62508922 Msa1205890:CDS 40.0%
GATACAAACCATCAGATGAG+AGG + chr8_1:62508942-62508961 None:intergenic 40.0%
!! TTCTCAAGTTGAGAGCTTCA+TGG - chr8_1:62508987-62509006 Msa1205890:CDS 40.0%
AGCCAAGAAAGCTGGTAAAT+TGG - chr8_1:62509068-62509087 Msa1205890:CDS 40.0%
!! CACAATTTGTTGAATGGTGC+AGG - chr8_1:62509138-62509157 Msa1205890:CDS 40.0%
!! AATTTGTTGAATGGTGCAGG+TGG - chr8_1:62509141-62509160 Msa1205890:CDS 40.0%
GCTACAAATAATCAAAGCGC+TGG + chr8_1:62509425-62509444 None:intergenic 40.0%
CTGAGGTGACAGTGTTAATT+TGG - chr8_1:62509656-62509675 Msa1205890:CDS 40.0%
! GTGACAGTGTTAATTTGGGA+TGG - chr8_1:62509661-62509680 Msa1205890:CDS 40.0%
!! CGAGATGGCACTTTTTAACT+TGG - chr8_1:62509789-62509808 Msa1205890:CDS 40.0%
!!! TGGCACTTTTTAACTTGGGA+TGG - chr8_1:62509794-62509813 Msa1205890:CDS 40.0%
ATGACAGACTCAATTGTTGC+AGG - chr8_1:62510040-62510059 Msa1205890:CDS 40.0%
AGACTCAATTGTTGCAGGAA+TGG - chr8_1:62510045-62510064 Msa1205890:CDS 40.0%
GAAGAATCTGGAAATCGTCA+GGG - chr8_1:62510152-62510171 Msa1205890:CDS 40.0%
! GTGACAACAATTTTTCCACC+TGG - chr8_1:62510217-62510236 Msa1205890:CDS 40.0%
!! CACAGCTGATCCATTTTTCA+TGG - chr8_1:62510268-62510287 Msa1205890:CDS 40.0%
!! TCATGGATCTGGAATTTTCC+TGG - chr8_1:62510285-62510304 Msa1205890:CDS 40.0%
! ATTTTACTTGGCTCAGCCAA+AGG + chr8_1:62510579-62510598 None:intergenic 40.0%
AATATGACAATCTGTAGCCG+GGG - chr8_1:62510660-62510679 Msa1205890:five_prime_UTR 40.0%
GAGGGAAGAAGAGTGAAGTA+AGG + chr8_1:62504685-62504704 None:intergenic 45.0%
TCCAATCCGAAAGGGACAAA+GGG + chr8_1:62504717-62504736 None:intergenic 45.0%
! TTGTTGTTCCGGTGTTGAAC+CGG + chr8_1:62504835-62504854 None:intergenic 45.0%
GAACCGTTAGATGAAACCCT+AGG - chr8_1:62504892-62504911 Msa1205890:three_prime_UTR 45.0%
CACCGGAATCTACTTCTCTT+CGG - chr8_1:62504983-62505002 Msa1205890:three_prime_UTR 45.0%
!!! GAGAGGTGGTGAGTTTTTTG+AGG - chr8_1:62505254-62505273 Msa1205890:CDS 45.0%
!!! GAGGTGGTGAGTTTTTTGAG+GGG - chr8_1:62505256-62505275 Msa1205890:CDS 45.0%
!! GGGAGTGGTTATTTTCTCTC+CGG - chr8_1:62505276-62505295 Msa1205890:CDS 45.0%
CGGAAGAGATGTTCCATTCT+CGG - chr8_1:62505368-62505387 Msa1205890:intron 45.0%
CTTCCATACATCCCTCCTAA+CGG + chr8_1:62505396-62505415 None:intergenic 45.0%
GGGATGTATGGAAGGAAGAA+AGG - chr8_1:62505402-62505421 Msa1205890:intron 45.0%
! GAAGGAAGAAAGGTGTGTCA+GGG - chr8_1:62505412-62505431 Msa1205890:intron 45.0%
! AGAAAGGTGTGTCAGGGTTT+AGG - chr8_1:62505418-62505437 Msa1205890:intron 45.0%
!! TAGGAAGGCATTTCAACGGA+AGG - chr8_1:62505437-62505456 Msa1205890:intron 45.0%
!! GTGCCGGTGTTGAATTTTGT+TGG - chr8_1:62505489-62505508 Msa1205890:intron 45.0%
!! CGGTGTTGAATTTTGTTGGG+AGG - chr8_1:62505493-62505512 Msa1205890:intron 45.0%
! GGATGCACCTGAGTTTTTGA+TGG - chr8_1:62505671-62505690 Msa1205890:intron 45.0%
! GAGGGAGAAAATTCAGGTTC+TGG - chr8_1:62505789-62505808 Msa1205890:intron 45.0%
! GCGTAGGTTGTGGGAATTTT+TGG - chr8_1:62505872-62505891 Msa1205890:intron 45.0%
TTGGCTGAAGATCCTGAAGA+TGG - chr8_1:62505891-62505910 Msa1205890:intron 45.0%
TGGACTTGATCTTTCTGGGT+CGG - chr8_1:62505911-62505930 Msa1205890:intron 45.0%
TTGATCTTTCTGGGTCGGAT+AGG - chr8_1:62505916-62505935 Msa1205890:intron 45.0%
AGTGTTAGCAATGCCAATGC+AGG - chr8_1:62505966-62505985 Msa1205890:intron 45.0%
TAGCAATGCCAATGCAGGTT+CGG - chr8_1:62505971-62505990 Msa1205890:intron 45.0%
TTGCTGTCCAGACTGAAGAA+CGG - chr8_1:62506014-62506033 Msa1205890:intron 45.0%
TGACAAACCGTTCTTCAGTC+TGG + chr8_1:62506024-62506043 None:intergenic 45.0%
CGGTTTGTCAAAGCATAAGG+AGG - chr8_1:62506034-62506053 Msa1205890:intron 45.0%
TCAAAGCATAAGGAGGGTGA+TGG - chr8_1:62506041-62506060 Msa1205890:intron 45.0%
ATGGTAGGAAGTTGTTACCG+TGG - chr8_1:62506087-62506106 Msa1205890:intron 45.0%
TCCTGATTCCCCAAATTCCA+CGG + chr8_1:62506107-62506126 None:intergenic 45.0%
GAAAACAAACCCTCTGCTTC+TGG - chr8_1:62506152-62506171 Msa1205890:intron 45.0%
!!! GGTTTTGAATGCAATGTCGC+GGG - chr8_1:62506229-62506248 Msa1205890:intron 45.0%
! GGATATGACGGAAAAGCTTC+TGG - chr8_1:62506280-62506299 Msa1205890:intron 45.0%
GAACCCATCAAAGCAAGTTC+AGG + chr8_1:62506314-62506333 None:intergenic 45.0%
!!! GGTTGTTTTGATGAGGGATG+AGG - chr8_1:62506343-62506362 Msa1205890:CDS 45.0%
TGTAGCACATTATGAGCCCA+AGG - chr8_1:62506403-62506422 Msa1205890:CDS 45.0%
CTTGCTTGCAGATTCCACAT+TGG + chr8_1:62506444-62506463 None:intergenic 45.0%
CAATGTGGAATCTGCAAGCA+AGG - chr8_1:62506442-62506461 Msa1205890:CDS 45.0%
TTCAACTATGCTCTCACTGC+TGG + chr8_1:62506486-62506505 None:intergenic 45.0%
ACAATCAAGGTCGGCAATGA+GGG - chr8_1:62506542-62506561 Msa1205890:intron 45.0%
AGGGTTCTGCTCAAGAAATG+AGG - chr8_1:62506561-62506580 Msa1205890:intron 45.0%
TGCTCAAGAAATGAGGTTGG+CGG - chr8_1:62506568-62506587 Msa1205890:intron 45.0%
! CTTCTTTAATGCTGGTGCTG+TGG + chr8_1:62506613-62506632 None:intergenic 45.0%
GTAACAATAGCTTCCCTCCT+AGG + chr8_1:62506862-62506881 None:intergenic 45.0%
! CTTAAGGTCACCAGAGCATT+TGG - chr8_1:62507219-62507238 Msa1205890:intron 45.0%
! TAAGGTCACCAGAGCATTTG+GGG - chr8_1:62507221-62507240 Msa1205890:intron 45.0%
! TTGGGGCAGGATCTTTGAAA+AGG - chr8_1:62507238-62507257 Msa1205890:intron 45.0%
! TGGGGCAGGATCTTTGAAAA+GGG - chr8_1:62507239-62507258 Msa1205890:intron 45.0%
GAAGGAAGGAGAGAATGGTT+CGG + chr8_1:62507341-62507360 None:intergenic 45.0%
GTTCATGACTTCATGCACTG+CGG - chr8_1:62507397-62507416 Msa1205890:intron 45.0%
TTCATGACTTCATGCACTGC+GGG - chr8_1:62507398-62507417 Msa1205890:intron 45.0%
CAGCACTATATTGCGATGCA+GGG + chr8_1:62507605-62507624 None:intergenic 45.0%
TCTGTGCCAAACCAGAGAAA+AGG - chr8_1:62507650-62507669 Msa1205890:intron 45.0%
CCTAGTAGACCTAACAGAAG+TGG + chr8_1:62507832-62507851 None:intergenic 45.0%
CCACTTCTGTTAGGTCTACT+AGG - chr8_1:62507829-62507848 Msa1205890:intron 45.0%
AGAGTTCATCTGGACTGCTA+AGG - chr8_1:62507862-62507881 Msa1205890:intron 45.0%
GTTGAGCCTTTGAGTACCTT+AGG - chr8_1:62507930-62507949 Msa1205890:intron 45.0%
! ACAGAGGTATAGCACATTGC+GGG + chr8_1:62508291-62508310 None:intergenic 45.0%
! GACAGAGGTATAGCACATTG+CGG + chr8_1:62508292-62508311 None:intergenic 45.0%
GCAATGTGCTATACCTCTGT+CGG - chr8_1:62508291-62508310 Msa1205890:intron 45.0%
!!! TGCTATACCTCTGTCGGTTT+TGG - chr8_1:62508297-62508316 Msa1205890:intron 45.0%
!!! GCTATACCTCTGTCGGTTTT+GGG - chr8_1:62508298-62508317 Msa1205890:intron 45.0%
!!! CTATACCTCTGTCGGTTTTG+GGG - chr8_1:62508299-62508318 Msa1205890:intron 45.0%
TACAATGCAGCTGTCAATCC+CGG + chr8_1:62508346-62508365 None:intergenic 45.0%
GAAGTTGAATGATGCCGTAC+TGG - chr8_1:62508819-62508838 Msa1205890:CDS 45.0%
AGGGAAGCAGGATATGTATG+GGG + chr8_1:62508875-62508894 None:intergenic 45.0%
GAAGGGAAGCAGGATATGTA+TGG + chr8_1:62508877-62508896 None:intergenic 45.0%
GTCACCATAGATTAAGCCCA+AGG - chr8_1:62508902-62508921 Msa1205890:CDS 45.0%
GATCCCTTGGGCTTAATCTA+TGG + chr8_1:62508909-62508928 None:intergenic 45.0%
TTCCTGATCCTCTCATCTGA+TGG - chr8_1:62508931-62508950 Msa1205890:CDS 45.0%
AACCATCAGATGAGAGGATC+AGG + chr8_1:62508936-62508955 None:intergenic 45.0%
TTGGCACAATGATACAGAGC+AGG + chr8_1:62509215-62509234 None:intergenic 45.0%
TTTCCATTCCCTTGAGCTTC+TGG - chr8_1:62509398-62509417 Msa1205890:CDS 45.0%
GAATTGCTGGATATTCCGCA+AGG - chr8_1:62510076-62510095 Msa1205890:CDS 45.0%
TGGATATTCCGCAAGGAGAT+CGG - chr8_1:62510083-62510102 Msa1205890:CDS 45.0%
GGAAGAATCTGGAAATCGTC+AGG - chr8_1:62510151-62510170 Msa1205890:CDS 45.0%
TCGTCAGGGAAATATCTGTG+AGG - chr8_1:62510166-62510185 Msa1205890:CDS 45.0%
! TGAGGCGTTCAACTTTCTGT+TGG - chr8_1:62510184-62510203 Msa1205890:CDS 45.0%
!! ATCATCTTTAGGGCAATCCC+AGG + chr8_1:62510238-62510257 None:intergenic 45.0%
GGCTGAGCCAAGTAAAATGT+TGG - chr8_1:62510581-62510600 Msa1205890:five_prime_UTR 45.0%
ATATGACAATCTGTAGCCGG+GGG - chr8_1:62510661-62510680 Msa1205890:five_prime_UTR 45.0%
!! TATATTATATTTATTTGATT+AGG + chr8_1:62508012-62508031 None:intergenic 5.0%
!! TATATTATATTTATTTGATT+AGG + chr8_1:62508012-62508031 None:intergenic 5.0%
!! AAAATTTAAAAAAAATAGAA+AGG + chr8_1:62510543-62510562 None:intergenic 5.0%
CCAATCCGAAAGGGACAAAG+GGG + chr8_1:62504716-62504735 None:intergenic 50.0%
GTCCAATCCGAAAGGGACAA+AGG + chr8_1:62504718-62504737 None:intergenic 50.0%
! GTCCCTTTCGGATTGGACTT+AGG - chr8_1:62504720-62504739 Msa1205890:three_prime_UTR 50.0%
CGCCTAAGTCCAATCCGAAA+GGG + chr8_1:62504725-62504744 None:intergenic 50.0%
! CCTTTCGGATTGGACTTAGG+CGG - chr8_1:62504723-62504742 Msa1205890:three_prime_UTR 50.0%
! ATCCCTAATGTGATGGGAGC+TGG - chr8_1:62504781-62504800 Msa1205890:three_prime_UTR 50.0%
CTCCAGCTCCCATCACATTA+GGG + chr8_1:62504786-62504805 None:intergenic 50.0%
ACTCCAGCTCCCATCACATT+AGG + chr8_1:62504787-62504806 None:intergenic 50.0%
! GTTTCGAACCGGTTCAACAC+CGG - chr8_1:62504824-62504843 Msa1205890:three_prime_UTR 50.0%
GTTACGTTAGATCTTCGGCC+AGG - chr8_1:62504926-62504945 Msa1205890:three_prime_UTR 50.0%
GTGAGTCGGAGAAAGAAACC+TGG + chr8_1:62504947-62504966 None:intergenic 50.0%
AGAAAGCGATCGGAGTGAGT+CGG + chr8_1:62504961-62504980 None:intergenic 50.0%
TTCCGGTGAGAGAAAGCGAT+CGG + chr8_1:62504971-62504990 None:intergenic 50.0%
GGTTTCACGAAAATCGGGTC+GGG + chr8_1:62505040-62505059 None:intergenic 50.0%
CGGTTTCACGAAAATCGGGT+CGG + chr8_1:62505041-62505060 None:intergenic 50.0%
!! TGTGGTGGCGATTTTGTCAC+CGG - chr8_1:62505162-62505181 Msa1205890:exon 50.0%
! TGGCGATTTTGTCACCGGTA+AGG - chr8_1:62505167-62505186 Msa1205890:exon 50.0%
! GGCGATTTTGTCACCGGTAA+GGG - chr8_1:62505168-62505187 Msa1205890:exon 50.0%
!!! GGTGAGTTTTTTGAGGGGAG+TGG - chr8_1:62505261-62505280 Msa1205890:CDS 50.0%
CGTTAGGAGGGATGTATGGA+AGG - chr8_1:62505394-62505413 Msa1205890:intron 50.0%
! GGAAGGAAGAAAGGTGTGTC+AGG - chr8_1:62505411-62505430 Msa1205890:intron 50.0%
AGGTGTGTCAGGGTTTAGGA+AGG - chr8_1:62505422-62505441 Msa1205890:intron 50.0%
AGGTGTCTTCGGAGAAGAAG+CGG - chr8_1:62505457-62505476 Msa1205890:intron 50.0%
TGTTGGGAGGAAAGAGGTTC+CGG - chr8_1:62505506-62505525 Msa1205890:intron 50.0%
AGTAATGTGCAGTGGGCGTT+AGG - chr8_1:62505561-62505580 Msa1205890:intron 50.0%
GTAATGTGCAGTGGGCGTTA+GGG - chr8_1:62505562-62505581 Msa1205890:intron 50.0%
TCGGGTTCATGTGGTGGTTT+CGG - chr8_1:62505599-62505618 Msa1205890:intron 50.0%
AGCAGGGGTGGTTGTTTGTT+GGG - chr8_1:62505625-62505644 Msa1205890:intron 50.0%
ACGGGGTTATGACTCTCCAT+TGG + chr8_1:62505756-62505775 None:intergenic 50.0%
TAACCCCGTTGAGGTGGAAA+AGG - chr8_1:62505767-62505786 Msa1205890:intron 50.0%
! TCCCTCCTTTTCCACCTCAA+CGG + chr8_1:62505775-62505794 None:intergenic 50.0%
ACTGAAATTGGACCGGCTGT+GGG - chr8_1:62505834-62505853 Msa1205890:intron 50.0%
CTGTGGGAACGGAGAGTAAA+CGG - chr8_1:62505850-62505869 Msa1205890:intron 50.0%
AGAGTAAACGGCGTAGGTTG+TGG - chr8_1:62505862-62505881 Msa1205890:intron 50.0%
GAGTAAACGGCGTAGGTTGT+GGG - chr8_1:62505863-62505882 Msa1205890:intron 50.0%
ACCGTGGAATTTGGGGAATC+AGG - chr8_1:62506103-62506122 Msa1205890:intron 50.0%
AGCACATTATGAGCCCAAGG+AGG - chr8_1:62506406-62506425 Msa1205890:CDS 50.0%
TTATGAGCCCAAGGAGGATC+AGG - chr8_1:62506412-62506431 Msa1205890:CDS 50.0%
TATGAGCCCAAGGAGGATCA+GGG - chr8_1:62506413-62506432 Msa1205890:CDS 50.0%
! GAAGTACCCTGATCCTCCTT+GGG + chr8_1:62506422-62506441 None:intergenic 50.0%
! GGATCAGGGTACTTCCAATG+TGG - chr8_1:62506427-62506446 Msa1205890:CDS 50.0%
AGCAAGGGAGATGTTCGTGT+TGG - chr8_1:62506458-62506477 Msa1205890:CDS 50.0%
CTCATTGCCGACCTTGATTG+TGG + chr8_1:62506543-62506562 None:intergenic 50.0%
CACAATCAAGGTCGGCAATG+AGG - chr8_1:62506541-62506560 Msa1205890:intron 50.0%
ACTATGCAACGGGGATCATC+AGG + chr8_1:62507177-62507196 None:intergenic 50.0%
ACGTGCACCTGGTCTAATAG+CGG - chr8_1:62507524-62507543 Msa1205890:intron 50.0%
GCAGCACTATATTGCGATGC+AGG + chr8_1:62507606-62507625 None:intergenic 50.0%
GCATCGCAATATAGTGCTGC+AGG - chr8_1:62507606-62507625 Msa1205890:intron 50.0%
CTGGAATAGAGAGAGGCAGT+GGG + chr8_1:62507756-62507775 None:intergenic 50.0%
TGCACAGCTGCAAAGATTGC+TGG + chr8_1:62507775-62507794 None:intergenic 50.0%
GCAATCTTTGCAGCTGTGCA+AGG - chr8_1:62507775-62507794 Msa1205890:intron 50.0%
!! GTGCAAGGACTAGTTGTGTG+CGG - chr8_1:62507790-62507809 Msa1205890:intron 50.0%
GGATCAGGAACTGATCCCTT+GGG + chr8_1:62508921-62508940 None:intergenic 50.0%
AGGATCAGGAACTGATCCCT+TGG + chr8_1:62508922-62508941 None:intergenic 50.0%
TACCAGCTTTCTTGGCTGCA+CGG + chr8_1:62509065-62509084 None:intergenic 50.0%
TGTTGAATGGTGCAGGTGGA+TGG - chr8_1:62509145-62509164 Msa1205890:CDS 50.0%
! TGGTGAAGCTTTTGTCCCTG+TGG - chr8_1:62509287-62509306 Msa1205890:CDS 50.0%
ATATTCCGCAAGGAGATCGG+AGG - chr8_1:62510086-62510105 Msa1205890:CDS 50.0%
TACTTCCTCCGATCTCCTTG+CGG + chr8_1:62510094-62510113 None:intergenic 50.0%
!! ATCTTTAGGGCAATCCCAGG+TGG + chr8_1:62510235-62510254 None:intergenic 50.0%
CTTCCTTAGACATCGCAGAC+AGG - chr8_1:62510375-62510394 Msa1205890:CDS 50.0%
AAGCCTGTCTGCGATGTCTA+AGG + chr8_1:62510381-62510400 None:intergenic 50.0%
AGACATCGCAGACAGGCTTA+TGG - chr8_1:62510382-62510401 Msa1205890:CDS 50.0%
GCAAAAAAGATGGACGGGTG+CGG + chr8_1:62510475-62510494 None:intergenic 50.0%
! ATATGGTGGAAATCCACCCC+CGG + chr8_1:62510680-62510699 None:intergenic 50.0%
TCCCTCCCCTTTGTCCCTTT+CGG - chr8_1:62504708-62504727 Msa1205890:three_prime_UTR 55.0%
TCCGAAAGGGACAAAGGGGA+GGG + chr8_1:62504712-62504731 None:intergenic 55.0%
ATCCGAAAGGGACAAAGGGG+AGG + chr8_1:62504713-62504732 None:intergenic 55.0%
CCCCTTTGTCCCTTTCGGAT+TGG - chr8_1:62504713-62504732 Msa1205890:three_prime_UTR 55.0%
CCGCCTAAGTCCAATCCGAA+AGG + chr8_1:62504726-62504745 None:intergenic 55.0%
! TCGGATTGGACTTAGGCGGT+TGG - chr8_1:62504727-62504746 Msa1205890:three_prime_UTR 55.0%
! CGGATTGGACTTAGGCGGTT+GGG - chr8_1:62504728-62504747 Msa1205890:three_prime_UTR 55.0%
GCGGTTGGGTTCATCTGAAC+CGG - chr8_1:62504742-62504761 Msa1205890:three_prime_UTR 55.0%
TGATGGGAGCTGGAGTTTCG+AGG - chr8_1:62504791-62504810 Msa1205890:three_prime_UTR 55.0%
CTCCGATCGCTTTCTCTCAC+CGG - chr8_1:62504966-62504985 Msa1205890:three_prime_UTR 55.0%
CCAGAGTGCGCACTCTCAAT+CGG + chr8_1:62505303-62505322 None:intergenic 55.0%
! CGATTGAGAGTGCGCACTCT+GGG - chr8_1:62505301-62505320 Msa1205890:intron 55.0%
GTTCCATTCTCGGCACCGTT+AGG - chr8_1:62505378-62505397 Msa1205890:intron 55.0%
CATTCTCGGCACCGTTAGGA+GGG - chr8_1:62505382-62505401 Msa1205890:intron 55.0%
GCACCGTTAGGAGGGATGTA+TGG - chr8_1:62505390-62505409 Msa1205890:intron 55.0%
TAGGGAAGGCTGGGGAAGAT+CGG - chr8_1:62505580-62505599 Msa1205890:intron 55.0%
TGGGGAAGATCGGGTTCATG+TGG - chr8_1:62505590-62505609 Msa1205890:intron 55.0%
GGAAGATCGGGTTCATGTGG+TGG - chr8_1:62505593-62505612 Msa1205890:intron 55.0%
GGTTCATGTGGTGGTTTCGG+AGG - chr8_1:62505602-62505621 Msa1205890:intron 55.0%
GAGCAGGGGTGGTTGTTTGT+TGG - chr8_1:62505624-62505643 Msa1205890:intron 55.0%
GGAGAGTCATAACCCCGTTG+AGG - chr8_1:62505758-62505777 Msa1205890:intron 55.0%
GAGTCATAACCCCGTTGAGG+TGG - chr8_1:62505761-62505780 Msa1205890:intron 55.0%
! CCTCCTTTTCCACCTCAACG+GGG + chr8_1:62505773-62505792 None:intergenic 55.0%
! CCCTCCTTTTCCACCTCAAC+GGG + chr8_1:62505774-62505793 None:intergenic 55.0%
CCCGTTGAGGTGGAAAAGGA+GGG - chr8_1:62505771-62505790 Msa1205890:intron 55.0%
GACTGAAATTGGACCGGCTG+TGG - chr8_1:62505833-62505852 Msa1205890:intron 55.0%
AATTGGACCGGCTGTGGGAA+CGG - chr8_1:62505839-62505858 Msa1205890:intron 55.0%
TTACTCTCCGTTCCCACAGC+CGG + chr8_1:62505849-62505868 None:intergenic 55.0%
GAACGGAGAGTAAACGGCGT+AGG - chr8_1:62505856-62505875 Msa1205890:intron 55.0%
AATGCCAATGCAGGTTCGGC+AGG - chr8_1:62505975-62505994 Msa1205890:intron 55.0%
AAACCCTCTGCTTCTGGCAC+TGG - chr8_1:62506158-62506177 Msa1205890:intron 55.0%
CTACCAGTGCCAGAAGCAGA+GGG + chr8_1:62506164-62506183 None:intergenic 55.0%
ACTACCAGTGCCAGAAGCAG+AGG + chr8_1:62506165-62506184 None:intergenic 55.0%
!! TCTGCTTCTGGCACTGGTAG+TGG - chr8_1:62506164-62506183 Msa1205890:intron 55.0%
GGGTCCGGTGGATCATGATT+TGG - chr8_1:62506208-62506227 Msa1205890:intron 55.0%
!! GGAAGTACCCTGATCCTCCT+TGG + chr8_1:62506423-62506442 None:intergenic 55.0%
AGATCCTGCCCCAAATGCTC+TGG + chr8_1:62507232-62507251 None:intergenic 55.0%
TCGCTCTGTCGTGATAGCAG+TGG + chr8_1:62507552-62507571 None:intergenic 55.0%
GCTATCACGACAGAGCGACA+CGG - chr8_1:62507554-62507573 Msa1205890:intron 55.0%
TAGAGAGAGGCAGTGGGTGT+GGG + chr8_1:62507750-62507769 None:intergenic 55.0%
ATAGAGAGAGGCAGTGGGTG+TGG + chr8_1:62507751-62507770 None:intergenic 55.0%
GCTGGAATAGAGAGAGGCAG+TGG + chr8_1:62507757-62507776 None:intergenic 55.0%
!!! ACCTCTGTCGGTTTTGGGGT+TGG - chr8_1:62508303-62508322 Msa1205890:intron 55.0%
ATGCAGCTGTCAATCCCGGA+CGG + chr8_1:62508342-62508361 None:intergenic 55.0%
GTGACGTACTGAAGGGAAGC+AGG + chr8_1:62508887-62508906 None:intergenic 55.0%
GGACCAGAAGCTCAAGGGAA+TGG + chr8_1:62509404-62509423 None:intergenic 55.0%
TTGCCTGAGTTTGGCCGAGA+TGG - chr8_1:62509774-62509793 Msa1205890:CDS 55.0%
ACGGGTGCGGAAATGGTGAA+CGG + chr8_1:62510462-62510481 None:intergenic 55.0%
AAGATGGACGGGTGCGGAAA+TGG + chr8_1:62510469-62510488 None:intergenic 55.0%
GACAAAGGGGAGGGAAGCGA+GGG + chr8_1:62504703-62504722 None:intergenic 60.0%
GAAGAATCTTCCGCCGCCGT+TGG - chr8_1:62505132-62505151 Msa1205890:three_prime_UTR 60.0%
ACCACAACCTCCTCCAACGG+CGG + chr8_1:62505148-62505167 None:intergenic 60.0%
GCCACCACAACCTCCTCCAA+CGG + chr8_1:62505151-62505170 None:intergenic 60.0%
! CCTCTCGGCACAGGTTGAAG+CGG + chr8_1:62505240-62505259 None:intergenic 60.0%
CTTCAACCTGTGCCGAGAGG+TGG - chr8_1:62505240-62505259 Msa1205890:CDS 60.0%
AACTCACCACCTCTCGGCAC+AGG + chr8_1:62505249-62505268 None:intergenic 60.0%
GTGCGCACTCTCAATCGGAC+CGG + chr8_1:62505298-62505317 None:intergenic 60.0%
! CCGATTGAGAGTGCGCACTC+TGG - chr8_1:62505300-62505319 Msa1205890:intron 60.0%
GCGCACTCTGGGCCGATTAA+CGG - chr8_1:62505312-62505331 Msa1205890:intron 60.0%
CACTCTGGGCCGATTAACGG+CGG - chr8_1:62505315-62505334 Msa1205890:intron 60.0%
TACACCACCGGAATCCCCAC+CGG + chr8_1:62505343-62505362 None:intergenic 60.0%
GATTCCGGTGGTGTAGGTGG+CGG - chr8_1:62505348-62505367 Msa1205890:intron 60.0%
TCTTCCGCCACCTACACCAC+CGG + chr8_1:62505355-62505374 None:intergenic 60.0%
! CCTCCTAACGGTGCCGAGAA+TGG + chr8_1:62505384-62505403 None:intergenic 60.0%
CCATTCTCGGCACCGTTAGG+AGG - chr8_1:62505381-62505400 Msa1205890:intron 60.0%
TTCGGAGAAGAAGCGGCCGT+GGG - chr8_1:62505464-62505483 Msa1205890:intron 60.0%
TTCAACACCGGCACCACCCA+CGG + chr8_1:62505483-62505502 None:intergenic 60.0%
GAGGAAAGAGGTTCCGGCCA+AGG - chr8_1:62505512-62505531 Msa1205890:intron 60.0%
AGAGGTTCCGGCCAAGGAGA+AGG - chr8_1:62505518-62505537 Msa1205890:intron 60.0%
TCCACTGCCTTCTCCTTGGC+CGG + chr8_1:62505528-62505547 None:intergenic 60.0%
CACCTCCACTGCCTTCTCCT+TGG + chr8_1:62505532-62505551 None:intergenic 60.0%
TGTGCAGTGGGCGTTAGGGA+AGG - chr8_1:62505566-62505585 Msa1205890:intron 60.0%
AGTGGGCGTTAGGGAAGGCT+GGG - chr8_1:62505571-62505590 Msa1205890:intron 60.0%
AGGGAAGGCTGGGGAAGATC+GGG - chr8_1:62505581-62505600 Msa1205890:intron 60.0%
TGTGGTGGTTTCGGAGGAGC+AGG - chr8_1:62505608-62505627 Msa1205890:intron 60.0%
GTGGTGGTTTCGGAGGAGCA+GGG - chr8_1:62505609-62505628 Msa1205890:intron 60.0%
TGGTGGTTTCGGAGGAGCAG+GGG - chr8_1:62505610-62505629 Msa1205890:intron 60.0%
CCCCGTTGAGGTGGAAAAGG+AGG - chr8_1:62505770-62505789 Msa1205890:intron 60.0%
ACTGCCTGCCGAACCTGCAT+TGG + chr8_1:62505982-62506001 None:intergenic 60.0%
CAGGTTCGGCAGGCAGTAGA+CGG - chr8_1:62505985-62506004 Msa1205890:intron 60.0%
!! GCTTCTGGCACTGGTAGTGG+TGG - chr8_1:62506167-62506186 Msa1205890:intron 60.0%
!! TCTGGCACTGGTAGTGGTGG+TGG - chr8_1:62506170-62506189 Msa1205890:intron 60.0%
!! CTGGCACTGGTAGTGGTGGT+GGG - chr8_1:62506171-62506190 Msa1205890:intron 60.0%
TGGTGGGAGGAGGCGGAAAT+TGG - chr8_1:62506187-62506206 Msa1205890:intron 60.0%
GGTGGGAGGAGGCGGAAATT+GGG - chr8_1:62506188-62506207 Msa1205890:intron 60.0%
GAGGAGGCGGAAATTGGGTC+CGG - chr8_1:62506193-62506212 Msa1205890:intron 60.0%
! GTCACCAGAGCATTTGGGGC+AGG - chr8_1:62507225-62507244 Msa1205890:intron 60.0%
AGTGGCGCCGCTATTAGACC+AGG + chr8_1:62507534-62507553 None:intergenic 60.0%
GCCAACCCCAAAACCGACAG+AGG + chr8_1:62508307-62508326 None:intergenic 60.0%
TGTTGGGCAGGATCTCCGTC+TGG + chr8_1:62509021-62509040 None:intergenic 60.0%
CAGCTTTCTTGGCTGCACGG+AGG + chr8_1:62509062-62509081 None:intergenic 60.0%
CTCCGTGCAGCCAAGAAAGC+TGG - chr8_1:62509060-62509079 Msa1205890:CDS 60.0%
GCGCTGGACCAGAAGCTCAA+GGG + chr8_1:62509409-62509428 None:intergenic 60.0%
! AGCGCTGGACCAGAAGCTCA+AGG + chr8_1:62509410-62509429 None:intergenic 60.0%
GTGCCATCTCGGCCAAACTC+AGG + chr8_1:62509780-62509799 None:intergenic 60.0%
TGACAATCTGTAGCCGGGGG+TGG - chr8_1:62510664-62510683 Msa1205890:five_prime_UTR 60.0%
GGACAAAGGGGAGGGAAGCG+AGG + chr8_1:62504704-62504723 None:intergenic 65.0%
GAATCTTCCGCCGCCGTTGG+AGG - chr8_1:62505135-62505154 Msa1205890:three_prime_UTR 65.0%
ACAACCTCCTCCAACGGCGG+CGG + chr8_1:62505145-62505164 None:intergenic 65.0%
GCCGTTGGAGGAGGTTGTGG+TGG - chr8_1:62505147-62505166 Msa1205890:three_prime_UTR 65.0%
CCGCTTCAACCTGTGCCGAG+AGG - chr8_1:62505237-62505256 Msa1205890:CDS 65.0%
GGTGGGGATTCCGGTGGTGT+AGG - chr8_1:62505342-62505361 Msa1205890:intron 65.0%
GGGGATTCCGGTGGTGTAGG+TGG - chr8_1:62505345-62505364 Msa1205890:intron 65.0%
CTTCGGAGAAGAAGCGGCCG+TGG - chr8_1:62505463-62505482 Msa1205890:intron 65.0%
TCCGGCCAAGGAGAAGGCAG+TGG - chr8_1:62505524-62505543 Msa1205890:intron 65.0%
GGCCAAGGAGAAGGCAGTGG+AGG - chr8_1:62505527-62505546 Msa1205890:intron 65.0%
CAGTGGGCGTTAGGGAAGGC+TGG - chr8_1:62505570-62505589 Msa1205890:intron 65.0%
GTGGGCGTTAGGGAAGGCTG+GGG - chr8_1:62505572-62505591 Msa1205890:intron 65.0%
TGGTTTCGGAGGAGCAGGGG+TGG - chr8_1:62505613-62505632 Msa1205890:intron 65.0%
GTTCGGCAGGCAGTAGACGG+TGG - chr8_1:62505988-62506007 Msa1205890:intron 65.0%
!! GCACTGGTAGTGGTGGTGGG+AGG - chr8_1:62506174-62506193 Msa1205890:intron 65.0%
!! CTGGTAGTGGTGGTGGGAGG+AGG - chr8_1:62506177-62506196 Msa1205890:intron 65.0%
!! GTAGTGGTGGTGGGAGGAGG+CGG - chr8_1:62506180-62506199 Msa1205890:intron 65.0%
GAGGCGGAAATTGGGTCCGG+TGG - chr8_1:62506196-62506215 Msa1205890:intron 65.0%
CACGACAGAGCGACACGGAG+CGG - chr8_1:62507559-62507578 Msa1205890:intron 65.0%
ACGACAGAGCGACACGGAGC+GGG - chr8_1:62507560-62507579 Msa1205890:intron 65.0%
GGCCACTACATGCAGCCGTC+CGG - chr8_1:62508324-62508343 Msa1205890:intron 65.0%
GCCACTACATGCAGCCGTCC+GGG - chr8_1:62508325-62508344 Msa1205890:intron 65.0%
TCCCGGACGGCTGCATGTAG+TGG + chr8_1:62508329-62508348 None:intergenic 65.0%
TCTTCCGCCGCCGTTGGAGG+AGG - chr8_1:62505138-62505157 Msa1205890:three_prime_UTR 70.0%
GCCGCCGTTGGAGGAGGTTG+TGG - chr8_1:62505144-62505163 Msa1205890:three_prime_UTR 70.0%
CCACCGGCGCCGCCGTTAAT+CGG + chr8_1:62505327-62505346 None:intergenic 70.0%
!! CGATTAACGGCGGCGCCGGT+GGG - chr8_1:62505325-62505344 Msa1205890:intron 70.0%
!! GATTAACGGCGGCGCCGGTG+GGG - chr8_1:62505326-62505345 Msa1205890:intron 70.0%
GGAGAAGAAGCGGCCGTGGG+TGG - chr8_1:62505467-62505486 Msa1205890:intron 70.0%
ACAGAGCGACACGGAGCGGG+TGG - chr8_1:62507563-62507582 Msa1205890:intron 70.0%
GGGCCGATTAACGGCGGCGC+CGG - chr8_1:62505321-62505340 Msa1205890:intron 75.0%
! CCGATTAACGGCGGCGCCGG+TGG - chr8_1:62505324-62505343 Msa1205890:intron 75.0%
GAAGCGGCCGTGGGTGGTGC+CGG - chr8_1:62505473-62505492 Msa1205890:intron 75.0%
!!! GGCGGCGCCGGTGGGGATTC+CGG - chr8_1:62505333-62505352 Msa1205890:intron 80.0%
!!! GGCGCCGGTGGGGATTCCGG+TGG - chr8_1:62505336-62505355 Msa1205890:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 62504626 62510740 62504626 ID=Msa1205890;Name=Msa1205890
chr8_1 mRNA 62504626 62510740 62504626 ID=Msa1205890-mRNA-1;Parent=Msa1205890;Name=Msa1205890-mRNA-1;_AED=0.02;_eAED=0.02;_QI=167|1|1|1|1|1|4|554|780
chr8_1 exon 62504626 62505304 62504626 ID=Msa1205890-mRNA-1:exon:20297;Parent=Msa1205890-mRNA-1
chr8_1 exon 62506285 62506549 62506285 ID=Msa1205890-mRNA-1:exon:20296;Parent=Msa1205890-mRNA-1
chr8_1 exon 62508106 62508219 62508106 ID=Msa1205890-mRNA-1:exon:20295;Parent=Msa1205890-mRNA-1
chr8_1 exon 62508735 62510740 62508735 ID=Msa1205890-mRNA-1:exon:20294;Parent=Msa1205890-mRNA-1
chr8_1 five_prime_UTR 62510574 62510740 62510574 ID=Msa1205890-mRNA-1:five_prime_utr;Parent=Msa1205890-mRNA-1
chr8_1 CDS 62508735 62510573 62508735 ID=Msa1205890-mRNA-1:cds;Parent=Msa1205890-mRNA-1
chr8_1 CDS 62508106 62508219 62508106 ID=Msa1205890-mRNA-1:cds;Parent=Msa1205890-mRNA-1
chr8_1 CDS 62506285 62506549 62506285 ID=Msa1205890-mRNA-1:cds;Parent=Msa1205890-mRNA-1
chr8_1 CDS 62505180 62505304 62505180 ID=Msa1205890-mRNA-1:cds;Parent=Msa1205890-mRNA-1
chr8_1 three_prime_UTR 62504626 62505179 62504626 ID=Msa1205890-mRNA-1:three_prime_utr;Parent=Msa1205890-mRNA-1
Gene Sequence

>Msa1205890

ATGGGAGCTGGAGTTTCGAGGTTGTGTTCTTGTTTCGAACCGGTTCAACACCGGAACAACAAAAAAACCGACAACCAAGACGTTACTATTTTCACTGATGAACCGTTAGATGAAACCCTAGGTCATTCTTTCTGTTACGTTAGATCTTCGGCCAGGTTTCTTTCTCCGACTCACTCCGATCGCTTTCTCTCACCGGAATCTACTTCTCTTCGGTTTTCACCTACTCATGAATCGGTTCTTAGAACCCGACCCGATTTTCGTGAAACCGCTTTTAAAGCTATTTCTGGTGCTTCTGTTAGTGCTAATAGTTCTGTTCCGAAAACGGTTATTCAGTTAGAAGAAGAATCTTCCGCCGCCGTTGGAGGAGGTTGTGGTGGCGATTTTGTCACCGGTAAGGGTAATATTGTAAATGGCTTTGAAAGTACGTCGTCGTTTAGTGCTCTACCGCTTCAACCTGTGCCGAGAGGTGGTGAGTTTTTTGAGGGGAGTGGTTATTTTCTCTCCGGTCCGATTGAGAGTGCGCACTCTGGGCCGATTAACGGCGGCGCCGGTGGGGATTCCGGTGGTGTAGGTGGCGGAAGAGATGTTCCATTCTCGGCACCGTTAGGAGGGATGTATGGAAGGAAGAAAGGTGTGTCAGGGTTTAGGAAGGCATTTCAACGGAAGGTGTCTTCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGTTGAATTTTGTTGGGAGGAAAGAGGTTCCGGCCAAGGAGAAGGCAGTGGAGGTGAAAAATGAGAGTAATGTGCAGTGGGCGTTAGGGAAGGCTGGGGAAGATCGGGTTCATGTGGTGGTTTCGGAGGAGCAGGGGTGGTTGTTTGTTGGGATTTACGACGGTTTTAATGGACCGGATGCACCTGAGTTTTTGATGGGGCATATGTACCGCAATGTTCATAATGAGCTTCAGGGTTTGTTTTGGGAACTTGATGAACCAATGGAGAGTCATAACCCCGTTGAGGTGGAAAAGGAGGGAGAAAATTCAGGTTCTGGTTTGGTGAATATGGTACAACAGACTGAAATTGGACCGGCTGTGGGAACGGAGAGTAAACGGCGTAGGTTGTGGGAATTTTTGGCTGAAGATCCTGAAGATGGACTTGATCTTTCTGGGTCGGATAGGTTTGCGTTTTCAGTTGACGATGCACTTAGTGTTAGCAATGCCAATGCAGGTTCGGCAGGCAGTAGACGGTGGCTGTTGCTGTCCAGACTGAAGAACGGTTTGTCAAAGCATAAGGAGGGTGATGGTTTGCCAAAACATAAGGAGGGTAATGGTAGGAAGTTGTTACCGTGGAATTTGGGGAATCAGGAAGAGAAAGAAGAAAAGTCTAAGGTGGAAAACAAACCCTCTGCTTCTGGCACTGGTAGTGGTGGTGGGAGGAGGCGGAAATTGGGTCCGGTGGATCATGATTTGGTTTTGAATGCAATGTCGCGGGCTCTTGAAGTGACAGAACTTGCGTATTTGGATATGACGGAAAAGCTTCTGGATACAAATCCTGAACTTGCTTTGATGGGTTCATGTCTGTTGGTTGTTTTGATGAGGGATGAGGATGTGTATGTTATGAATGTTGGGGATAGTCGTGCAATTGTAGCACATTATGAGCCCAAGGAGGATCAGGGTACTTCCAATGTGGAATCTGCAAGCAAGGGAGATGTTCGTGTTGGTTCCAGCAGTGAGAGCATAGTTGAAGAGTCCTTTGCTTTAGATGGAACTCAAACTGAAACCACAATCAAGGTCGGCAATGAGGGTTCTGCTCAAGAAATGAGGTTGGCGGCATTGCAGCTGTCTACTGACCACAGCACCAGCATTAAAGAAGAAATCATTAGAATTAAAAATGAGCATCCTGATGATCCCCGTTGCATAGTCAATGATAGAGTTAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGGGCAGGATCTTTGAAAAGGCCGAAGTTGAATGATGCCGTACTGGAAATGTTTCGTAATGAATTTATTGGAACTGCCCCATACATATCCTGCTTCCCTTCAGTACGTCACCATAGATTAAGCCCAAGGGATCAGTTCCTGATCCTCTCATCTGATGGTTTGTATCAATATCTAAACAATGAAGAAGTTGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGACGGAGATCCTGCCCAACATTTAATTGAAGAGCTGCTCCTCCGTGCAGCCAAGAAAGCTGGAATGGATTTTCATGAATTGCTGGATATTCCGCAAGGAGATCGGAGGAAGTATCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCAGGGAAATATCTGTGA
Protein sequence

>Msa1205890

MGAGVSRLCSCFEPVQHRNNKKTDNQDVTIFTDEPLDETLGHSFCYVRSSARFLSPTHSDRFLSPESTSLRFSPTHESVLRTRPDFRETAFKAISGASVSANSSVPKTVIQLEEESSAAVGGGCGGDFVTGKGNIVNGFESTSSFSALPLQPVPRGGEFFEGSGYFLSGPIESAHSGPINGGAGGDSGGVGGGRDVPFSAPLGGMYGRKKGVSGFRKAFQRKVSSEKKRPWVVPVLNFVGRKEVPAKEKAVEVKNESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHMYRNVHNELQGLFWELDEPMESHNPVEVEKEGENSGSGLVNMVQQTEIGPAVGTESKRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVSNANAGSAGSRRWLLLSRLKNGLSKHKEGDGLPKHKEGNGRKLLPWNLGNQEEKEEKSKVENKPSASGTGSGGGRRRKLGPVDHDLVLNAMSRALEVTELAYLDMTEKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKEDQGTSNVESASKGDVRVGSSSESIVEESFALDGTQTETTIKVGNEGSAQEMRLAALQLSTDHSTSIKEEIIRIKNEHPDDPRCIVNDRVKGRLKVTRAFGAGSLKRPKLNDAVLEMFRNEFIGTAPYISCFPSVRHHRLSPRDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL*