Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1147650 | XP_013448504.1 | 99.597 | 248 | 1 | 0 | 1 | 248 | 1 | 248 | 2.95e-178 | 499 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1147650 | sp|Q9M3V8|RS6_ASPOF | 93.145 | 248 | 16 | 1 | 1 | 248 | 1 | 247 | 1.09e-168 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1147650 | A0A072TZB9 | 99.597 | 248 | 1 | 0 | 1 | 248 | 1 | 248 | 1.41e-178 | 499 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa1147650 | -0.803605 | 3.218345e-49 | -8.615850e-47 |
| Msa0007810 | Msa1147650 | -0.812032 | 5.198043e-51 | -8.615850e-47 |
| Msa0032780 | Msa1147650 | 0.813676 | 2.268970e-51 | -8.615850e-47 |
| Msa0033220 | Msa1147650 | 0.824230 | 9.034262e-54 | -8.615850e-47 |
| Msa0044010 | Msa1147650 | 0.817200 | 3.730620e-52 | -8.615850e-47 |
| Msa0056230 | Msa1147650 | -0.801929 | 7.140042e-49 | -8.615850e-47 |
| Msa0066890 | Msa1147650 | -0.823740 | 1.176927e-53 | -8.615850e-47 |
| Msa0080030 | Msa1147650 | 0.813830 | 2.098911e-51 | -8.615850e-47 |
| Msa0080820 | Msa1147650 | 0.801835 | 7.466207e-49 | -8.615850e-47 |
| Msa0095810 | Msa1147650 | -0.804045 | 2.608175e-49 | -8.615850e-47 |
| Msa0120520 | Msa1147650 | 0.805942 | 1.046415e-49 | -8.615850e-47 |
| Msa0610690 | Msa1147650 | 0.820088 | 8.251129e-53 | -8.615850e-47 |
| Msa0651870 | Msa1147650 | 0.811924 | 5.488331e-51 | -8.615850e-47 |
| Msa0651890 | Msa1147650 | 0.807802 | 4.230887e-50 | -8.615850e-47 |
| Msa0726170 | Msa1147650 | -0.819447 | 1.156061e-52 | -8.615850e-47 |
| Msa0742370 | Msa1147650 | -0.844524 | 7.168622e-59 | -8.615850e-47 |
| Msa0779450 | Msa1147650 | -0.847416 | 1.172960e-59 | -8.615850e-47 |
| Msa0841860 | Msa1147650 | 0.804324 | 2.281344e-49 | -8.615850e-47 |
| Msa0138990 | Msa1147650 | -0.809661 | 1.694773e-50 | -8.615850e-47 |
| Msa0154880 | Msa1147650 | -0.809356 | 1.970397e-50 | -8.615850e-47 |
| Msa0154890 | Msa1147650 | -0.836798 | 7.574658e-57 | -8.615850e-47 |
| Msa0165640 | Msa1147650 | 0.815233 | 1.026658e-51 | -8.615850e-47 |
| Msa0389080 | Msa1147650 | -0.819582 | 1.076667e-52 | -8.615850e-47 |
| Msa0402070 | Msa1147650 | -0.825548 | 4.415556e-54 | -8.615850e-47 |
| Msa1014550 | Msa1147650 | -0.805881 | 1.077480e-49 | -8.615850e-47 |
| Msa1019090 | Msa1147650 | 0.843190 | 1.631737e-58 | -8.615850e-47 |
| Msa1039440 | Msa1147650 | -0.810090 | 1.369925e-50 | -8.615850e-47 |
| Msa1085570 | Msa1147650 | -0.805487 | 1.303701e-49 | -8.615850e-47 |
| Msa0269220 | Msa1147650 | -0.808953 | 2.403854e-50 | -8.615850e-47 |
| Msa0337970 | Msa1147650 | 0.805220 | 1.482957e-49 | -8.615850e-47 |
| Msa0339100 | Msa1147650 | 0.807921 | 3.990151e-50 | -8.615850e-47 |
| Msa0354970 | Msa1147650 | -0.824415 | 8.171274e-54 | -8.615850e-47 |
| Msa0355080 | Msa1147650 | -0.840170 | 1.021851e-57 | -8.615850e-47 |
| Msa1147650 | Msa1205490 | 0.816157 | 6.390788e-52 | -8.615850e-47 |
| Msa1147650 | Msa1207920 | -0.843196 | 1.625442e-58 | -8.615850e-47 |
| Msa1147650 | Msa1273620 | -0.819830 | 9.449634e-53 | -8.615850e-47 |
| Msa1147650 | Msa1277260 | 0.800556 | 1.363466e-48 | -8.615850e-47 |
| Msa1147650 | Msa1297640 | 0.808489 | 3.019689e-50 | -8.615850e-47 |
| Msa1147650 | Msa1297690 | 0.813068 | 3.086261e-51 | -8.615850e-47 |
| Msa1147650 | Msa1311600 | -0.802859 | 4.593270e-49 | -8.615850e-47 |
| Msa1147650 | Msa1323070 | 0.819064 | 1.412898e-52 | -8.615850e-47 |
| Msa1147650 | Msa1329750 | 0.812739 | 3.643441e-51 | -8.615850e-47 |
| Msa1147650 | Msa1331570 | -0.826956 | 2.041072e-54 | -8.615850e-47 |
| Msa1147650 | Msa1363280 | -0.827340 | 1.651605e-54 | -8.615850e-47 |
| Msa1147650 | Msa1366140 | -0.801671 | 8.066907e-49 | -8.615850e-47 |
| Msa1147650 | Msa1388030 | -0.804302 | 2.306027e-49 | -8.615850e-47 |
| Msa1147650 | Msa1396200 | -0.818425 | 1.973116e-52 | -8.615850e-47 |
| Msa1147650 | Msa1397640 | 0.886958 | 2.172403e-72 | -8.615850e-47 |
| Msa0526490 | Msa1147650 | -0.804542 | 2.054602e-49 | -8.615850e-47 |
| Msa0526500 | Msa1147650 | -0.816932 | 4.286086e-52 | -8.615850e-47 |
| Msa0579080 | Msa1147650 | 0.820705 | 5.956093e-53 | -8.615850e-47 |
| Msa0579160 | Msa1147650 | 0.816160 | 6.382511e-52 | -8.615850e-47 |
| Msa0579220 | Msa1147650 | 0.818755 | 1.660763e-52 | -8.615850e-47 |
| Msa0862480 | Msa1147650 | -0.844621 | 6.750431e-59 | -8.615850e-47 |
| Msa0909260 | Msa1147650 | 0.801410 | 9.122065e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1147650 | MtrunA17_Chr7g0234621 | 99.597 | 248 | 1 | 0 | 1 | 248 | 1 | 248 | 0.0 | 499 |
| Msa1147650 | MtrunA17_Chr4g0047021 | 96.371 | 248 | 9 | 0 | 1 | 248 | 1 | 248 | 3.84e-176 | 484 |
| Msa1147650 | MtrunA17_Chr2g0282411 | 96.371 | 248 | 9 | 0 | 1 | 248 | 1 | 248 | 4.38e-176 | 484 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1147650 | AT5G10360.1 | 91.532 | 248 | 21 | 0 | 1 | 248 | 1 | 248 | 3.17e-166 | 459 |
| Msa1147650 | AT4G31700.1 | 91.200 | 250 | 20 | 1 | 1 | 248 | 1 | 250 | 5.35e-158 | 438 |
| Msa1147650 | AT5G10360.2 | 73.387 | 248 | 14 | 1 | 1 | 248 | 1 | 196 | 2.75e-121 | 343 |
| Msa1147650 | AT4G31700.2 | 89.894 | 188 | 17 | 1 | 63 | 248 | 1 | 188 | 3.60e-108 | 310 |
Find 103 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCCTTGCTCTCTTTCTT+TGG | 0.173886 | 7_4:-27028379 | None:intergenic |
| ATTGTTCTTGGTGTCATTCT+TGG | 0.201176 | 7_4:-27025354 | None:intergenic |
| GAATTTGCAGACGAGCATTT+TGG | 0.208379 | 7_4:+27026216 | Msa1147650:intron |
| GGCGATTCTCTTCTTCTTAT+CGG | 0.223662 | 7_4:-27028402 | None:intergenic |
| AGCGAAGTTTATATTGTTCT+TGG | 0.225712 | 7_4:-27025366 | None:intergenic |
| CATCGATTTCAAGCTTCTTC+TGG | 0.243453 | 7_4:-27025653 | None:intergenic |
| ACTTTCATAGAATAGAATTT+TGG | 0.249560 | 7_4:+27028825 | Msa1147650:three_prime_UTR |
| CATTATATCCTCCCACAATT+AGG | 0.258816 | 7_4:+27028737 | Msa1147650:three_prime_UTR |
| ACCAGAAGCTTCTTGCTTCC+AGG | 0.274677 | 7_4:+27028450 | Msa1147650:CDS |
| TCATACCTTCACCACAGTTT+TGG | 0.301574 | 7_4:+27028567 | Msa1147650:three_prime_UTR |
| TTGAGATTAGACTTGTAAAA+TGG | 0.310062 | 7_4:+27028877 | Msa1147650:three_prime_UTR |
| TTATTTGGTTGCAGGGAAAA+AGG | 0.319097 | 7_4:+27028310 | Msa1147650:intron |
| TGGTGCTAACAGGAATTTAA+AGG | 0.325501 | 7_4:+27026364 | Msa1147650:intron |
| AGTAACTAGTCTTTGTATCT+TGG | 0.331940 | 7_4:-27028345 | None:intergenic |
| CGGATCTTGGACGCTCTCTT+AGG | 0.339335 | 7_4:-27026936 | None:intergenic |
| TTGTTCTTGGTGTCATTCTT+GGG | 0.344635 | 7_4:-27025353 | None:intergenic |
| GTTGAAAAGCTTACGGATCT+TGG | 0.369922 | 7_4:-27026949 | None:intergenic |
| CTCTTTCTTTGGAGTGTAAG+AGG | 0.370544 | 7_4:-27028368 | None:intergenic |
| GTGTTCGTCTGTTGCTTCAC+AGG | 0.378377 | 7_4:+27026461 | Msa1147650:CDS |
| ACCTGGAAGCAAGAAGCTTC+TGG | 0.379692 | 7_4:-27028451 | None:intergenic |
| AGACCTTTCTGTTCTGAACT+TGG | 0.382910 | 7_4:+27026845 | Msa1147650:CDS |
| GTCAGGACTCCCTGCTTCAT+TGG | 0.387254 | 7_4:-27026430 | None:intergenic |
| GTAACTAGTCTTTGTATCTT+GGG | 0.392706 | 7_4:-27028344 | None:intergenic |
| CTCTTAGGACCTCTCATCCT+TGG | 0.398073 | 7_4:-27026921 | None:intergenic |
| GGATTTCACAAGAGGTCAAT+GGG | 0.417305 | 7_4:+27026246 | Msa1147650:CDS |
| TGCCTTAGCACTGGAAATCC+TGG | 0.423380 | 7_4:-27028522 | None:intergenic |
| GCTTCTTGCTTCCAGGTTGA+AGG | 0.423629 | 7_4:+27028457 | Msa1147650:CDS |
| CTTGCTTTCGTGGGCATGGA+AGG | 0.423949 | 7_4:+27026772 | Msa1147650:CDS |
| TCTATTCTATGAAAGTTGTA+AGG | 0.442599 | 7_4:-27028818 | None:intergenic |
| TCCTTGTTTGTCACAACCTC+CGG | 0.446389 | 7_4:-27026404 | None:intergenic |
| TTCATAAGAATCCTAATTGT+GGG | 0.452966 | 7_4:-27028748 | None:intergenic |
| AAGTTCAGAACAGAAAGGTC+TGG | 0.453108 | 7_4:-27026843 | None:intergenic |
| CTCTCTCTGCTCCTTCAACC+TGG | 0.453539 | 7_4:-27028468 | None:intergenic |
| TTCTTCTGGCATCCAGTGGT+GGG | 0.454271 | 7_4:-27025639 | None:intergenic |
| TGTTCGTCTGTTGCTTCACA+GGG | 0.455437 | 7_4:+27026462 | Msa1147650:CDS |
| CTTCTTCTGGCATCCAGTGG+TGG | 0.456547 | 7_4:-27025640 | None:intergenic |
| GAAGACATGCGCACGGTAAG+AGG | 0.460524 | 7_4:-27025411 | None:intergenic |
| TGTAGAAGATTGCAATATGA+AGG | 0.461335 | 7_4:+27025477 | Msa1147650:exon |
| TTGTAAAATGGTGCGAGTAT+AGG | 0.463897 | 7_4:+27028889 | Msa1147650:three_prime_UTR |
| AGCAACAGACGAACACGGCC+AGG | 0.465092 | 7_4:-27026454 | None:intergenic |
| ACTCCTTGCTTTCGTGGGCA+TGG | 0.465842 | 7_4:+27026768 | Msa1147650:CDS |
| CTTCTCAACATCGGTCAGGC+CGG | 0.479719 | 7_4:-27026898 | None:intergenic |
| ACAAGGATTTCCAATGAAGC+AGG | 0.479949 | 7_4:+27026420 | Msa1147650:CDS |
| GAACTTGGTAATTGTGAAGA+AGG | 0.488543 | 7_4:+27026860 | Msa1147650:CDS |
| TAGACAGGTTGAAAAGCTTA+CGG | 0.491080 | 7_4:-27026956 | None:intergenic |
| ACAGGAACTCCTTGCTTTCG+TGG | 0.493316 | 7_4:+27026762 | Msa1147650:intron |
| CGCAGGAGGAAGTCCGTTCG+TGG | 0.499221 | 7_4:+27026807 | Msa1147650:CDS |
| CGTGGGCATGGAAGGCGTAA+TGG | 0.499837 | 7_4:+27026780 | Msa1147650:CDS |
| TTCTCAACATCGGTCAGGCC+GGG | 0.500903 | 7_4:-27026897 | None:intergenic |
| GAGGTCAATGGGGATGCTCT+TGG | 0.504931 | 7_4:+27026257 | Msa1147650:CDS |
| TTGGCTTCTCAACATCGGTC+AGG | 0.507183 | 7_4:-27026902 | None:intergenic |
| AGGATTTCACAAGAGGTCAA+TGG | 0.507253 | 7_4:+27026245 | Msa1147650:CDS |
| ATCCAGGATTTCCAGTGCTA+AGG | 0.509483 | 7_4:+27028520 | Msa1147650:CDS |
| TCACATCATCATCCTTAGAC+AGG | 0.513297 | 7_4:-27026971 | None:intergenic |
| ATTCATAAGAATCCTAATTG+TGG | 0.517802 | 7_4:-27028749 | None:intergenic |
| TCTGTCATGACAAATACAAA+TGG | 0.528698 | 7_4:+27028610 | Msa1147650:three_prime_UTR |
| AGTTCAGAACAGAAAGGTCT+GGG | 0.537667 | 7_4:-27026842 | None:intergenic |
| TGTTGTAAATGTCCTACGGT+AGG | 0.539789 | 7_4:-27027009 | None:intergenic |
| AGGACATTTACAACAAAAGC+TGG | 0.541932 | 7_4:+27027017 | Msa1147650:CDS |
| AAGCAGGGAGTCCTGACCCC+TGG | 0.546007 | 7_4:+27026436 | Msa1147650:CDS |
| AAGCTTCTTCTGGCATCCAG+TGG | 0.547317 | 7_4:-27025643 | None:intergenic |
| GCTGACAATGCACCCACGAA+CGG | 0.547404 | 7_4:-27026820 | None:intergenic |
| GCAACAGACGAACACGGCCA+GGG | 0.547657 | 7_4:-27026453 | None:intergenic |
| CAGGAACTCCTTGCTTTCGT+GGG | 0.551855 | 7_4:+27026763 | Msa1147650:intron |
| GGCGTAATGGAGAGCGCAGG+AGG | 0.556424 | 7_4:+27026793 | Msa1147650:CDS |
| CACTCCAAAGAAAGAGAGCA+AGG | 0.560832 | 7_4:+27028375 | Msa1147650:CDS |
| AATGTTGCGAATCCCACCAC+TGG | 0.561300 | 7_4:+27025627 | Msa1147650:CDS |
| TAAGGCAGCTGTCACCGCCT+AGG | 0.568165 | 7_4:+27028538 | Msa1147650:CDS |
| CTTCCATGCCCACGAAAGCA+AGG | 0.568809 | 7_4:-27026771 | None:intergenic |
| CAAGACCAAAACTGTGGTGA+AGG | 0.569427 | 7_4:-27028572 | None:intergenic |
| GGACAAGAGGATTTCACAAG+AGG | 0.571370 | 7_4:+27026238 | Msa1147650:CDS |
| CAACAGACGAACACGGCCAG+GGG | 0.576712 | 7_4:-27026452 | None:intergenic |
| ACCGCCGCGTCGGAGTGTCT+CGG | 0.586287 | 7_4:-27025451 | None:intergenic |
| TGACCGATGTTGAGAAGCCA+AGG | 0.592857 | 7_4:+27026904 | Msa1147650:CDS |
| CTCAATTTCGAGAACAAGGT+AGG | 0.593837 | 7_4:-27028859 | None:intergenic |
| GGTGACAGCTGCCTTAGCAC+TGG | 0.594937 | 7_4:-27028531 | None:intergenic |
| TGAAGGTATGACAGCAACCT+AGG | 0.597675 | 7_4:-27028555 | None:intergenic |
| CATCCTTGGCTTCTCAACAT+CGG | 0.602359 | 7_4:-27026907 | None:intergenic |
| GTTGAGAAGCCAAGGATGAG+AGG | 0.608216 | 7_4:+27026912 | Msa1147650:CDS |
| TAATCTCAATTTCGAGAACA+AGG | 0.608980 | 7_4:-27028863 | None:intergenic |
| TTCTACAACAACCGCCGCGT+CGG | 0.614344 | 7_4:-27025461 | None:intergenic |
| AATCGCCAAGGCAAAATCAG+AGG | 0.625414 | 7_4:+27028418 | Msa1147650:CDS |
| GCAGGAGGAAGTCCGTTCGT+GGG | 0.626781 | 7_4:+27026808 | Msa1147650:CDS |
| CAAGGATTTCCAATGAAGCA+GGG | 0.632810 | 7_4:+27026421 | Msa1147650:CDS |
| GAAGGCGTAATGGAGAGCGC+AGG | 0.640543 | 7_4:+27026790 | Msa1147650:CDS |
| CAATGGGGATGCTCTTGGTG+AGG | 0.642872 | 7_4:+27026262 | Msa1147650:CDS |
| AACTTGGTAATTGTGAAGAA+GGG | 0.654902 | 7_4:+27026861 | Msa1147650:CDS |
| TGTGAAGCAACAGACGAACA+CGG | 0.657981 | 7_4:-27026459 | None:intergenic |
| TCCGAGACACTCCGACGCGG+CGG | 0.663751 | 7_4:+27025450 | Msa1147650:five_prime_UTR |
| TAAGAAGAAGAGAATCGCCA+AGG | 0.666176 | 7_4:+27028406 | Msa1147650:CDS |
| AAGGGTGAGAATGATTTACC+CGG | 0.666590 | 7_4:+27026879 | Msa1147650:CDS |
| TTACCAAGTTCAGAACAGAA+AGG | 0.669660 | 7_4:-27026848 | None:intergenic |
| GAATGCTGAAGACATGCGCA+CGG | 0.670749 | 7_4:-27025418 | None:intergenic |
| AAATGGTGCGAGTATAGGTG+TGG | 0.677858 | 7_4:+27028894 | Msa1147650:three_prime_UTR |
| ATAAGAATCCTAATTGTGGG+AGG | 0.682487 | 7_4:-27028745 | None:intergenic |
| ACCGGAGGTTGTGACAAACA+AGG | 0.687549 | 7_4:+27026403 | Msa1147650:CDS |
| AAATAACAAGACCAAAACTG+TGG | 0.697491 | 7_4:-27028578 | None:intergenic |
| AGTATGTCAACACCTACCGT+AGG | 0.700274 | 7_4:+27026997 | Msa1147650:CDS |
| GTTCGTCTGTTGCTTCACAG+GGG | 0.715022 | 7_4:+27026463 | Msa1147650:CDS |
| GATTTCACAAGAGGTCAATG+GGG | 0.738312 | 7_4:+27026247 | Msa1147650:CDS |
| TGTCTAAGGATGATGATGTG+AGG | 0.746514 | 7_4:+27026973 | Msa1147650:CDS |
| CTCTCCGAGACACTCCGACG+CGG | 0.758499 | 7_4:+27025447 | Msa1147650:five_prime_UTR |
| AGGTATGACAGCAACCTAGG+CGG | 0.774656 | 7_4:-27028552 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAATAAACAAGTAAAAT+GGG | - | chr7_4:27025704-27025723 | None:intergenic | 10.0% |
| !!! | TTTAAAATAAACAAGTAAAA+TGG | - | chr7_4:27025705-27025724 | None:intergenic | 10.0% |
| !!! | TACAAATTTAAAATCTTTTT+GGG | - | chr7_4:27025793-27025812 | None:intergenic | 10.0% |
| !! | ATAATAATTTATCATCAAAT+AGG | - | chr7_4:27026592-27026611 | None:intergenic | 10.0% |
| !!! | AATTTGTTTTTAATAGAAAT+AGG | - | chr7_4:27026689-27026708 | None:intergenic | 10.0% |
| !! | CATTCTATTAAATATAAATA+AGG | - | chr7_4:27027916-27027935 | None:intergenic | 10.0% |
| !!! | ATTTTGATATATATTCTAAA+TGG | + | chr7_4:27028281-27028300 | Msa1147650:intron | 10.0% |
| !! | TAAAATAAACAAGTAAAATG+GGG | - | chr7_4:27025703-27025722 | None:intergenic | 15.0% |
| !!! | GTACAAATTTAAAATCTTTT+TGG | - | chr7_4:27025794-27025813 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTGTGATATATAT+TGG | + | chr7_4:27026119-27026138 | Msa1147650:intron | 15.0% |
| !!! | GATTGATATTTTAATAAACA+AGG | - | chr7_4:27027091-27027110 | None:intergenic | 15.0% |
| !! | TTTATTAAAATATCAATCTG+TGG | + | chr7_4:27027093-27027112 | Msa1147650:intron | 15.0% |
| !! | TTTAACCTTATTATATCAAT+CGG | + | chr7_4:27027663-27027682 | Msa1147650:intron | 15.0% |
| !! | TTAAAAATAGTAAAGATCAT+TGG | - | chr7_4:27028934-27028953 | None:intergenic | 15.0% |
| !! | AAAATAAACAAGTAAAATGG+GGG | - | chr7_4:27025702-27025721 | None:intergenic | 20.0% |
| !!! | TAAATCATTGTTCATTTTCA+CGG | + | chr7_4:27025721-27025740 | Msa1147650:intron | 20.0% |
| !! | ATTGATTAGTATAAGAGTTA+AGG | + | chr7_4:27025826-27025845 | Msa1147650:intron | 20.0% |
| !! | TTGATTAGTATAAGAGTTAA+GGG | + | chr7_4:27025827-27025846 | Msa1147650:intron | 20.0% |
| !! | GTGTGATGATATATTAATAT+TGG | + | chr7_4:27026147-27026166 | Msa1147650:intron | 20.0% |
| !! | GATGATATATTAATATTGGT+TGG | + | chr7_4:27026151-27026170 | Msa1147650:intron | 20.0% |
| !!! | TACTATTATATCTTTTGAGT+CGG | + | chr7_4:27026645-27026664 | Msa1147650:intron | 20.0% |
| !!! | GTTTTTAATAGAAATAGGTA+GGG | - | chr7_4:27026684-27026703 | None:intergenic | 20.0% |
| !!! | TGTTTTTAATAGAAATAGGT+AGG | - | chr7_4:27026685-27026704 | None:intergenic | 20.0% |
| !! | AATAGAAAAATTACAAGGAT+GGG | - | chr7_4:27027051-27027070 | None:intergenic | 20.0% |
| !! | TAATAGAAAAATTACAAGGA+TGG | - | chr7_4:27027052-27027071 | None:intergenic | 20.0% |
| !! | CAACTAATAGAAAAATTACA+AGG | - | chr7_4:27027056-27027075 | None:intergenic | 20.0% |
| !! | AAAGTTTAACAATTTGATAC+AGG | - | chr7_4:27027204-27027223 | None:intergenic | 20.0% |
| !! | ATATATATTCTAAATGGTAC+TGG | + | chr7_4:27028287-27028306 | Msa1147650:intron | 20.0% |
| !!! | ACTTTCATAGAATAGAATTT+TGG | + | chr7_4:27028825-27028844 | Msa1147650:three_prime_UTR | 20.0% |
| !!! | TTTAATTTTTTATTGTCCTC+CGG | + | chr7_4:27028949-27028968 | Msa1147650:three_prime_UTR | 20.0% |
| ! | TGTAAACAACTTAGATTGTT+TGG | + | chr7_4:27025882-27025901 | Msa1147650:intron | 25.0% |
| !! | TATTTCTATGAATCTGAACA+TGG | - | chr7_4:27026183-27026202 | None:intergenic | 25.0% |
| ! | TTTCTATTAGTTGTCTCATT+TGG | + | chr7_4:27027063-27027082 | Msa1147650:intron | 25.0% |
| ! | TTAAAAAGAGGTCCATATTA+GGG | - | chr7_4:27027141-27027160 | None:intergenic | 25.0% |
| ! | TTTAAAAAGAGGTCCATATT+AGG | - | chr7_4:27027142-27027161 | None:intergenic | 25.0% |
| !! | TAATATGGACCTCTTTTTAA+AGG | + | chr7_4:27027141-27027160 | Msa1147650:intron | 25.0% |
| !! | AATATGGACCTCTTTTTAAA+GGG | + | chr7_4:27027142-27027161 | Msa1147650:intron | 25.0% |
| ! | ATCAAAATCAAGAAGGATAT+TGG | - | chr7_4:27027322-27027341 | None:intergenic | 25.0% |
| ! | TAGGTTTATCAAAATCAAGA+AGG | - | chr7_4:27027329-27027348 | None:intergenic | 25.0% |
| ! | ATAGTTGTTAGCATAGAAAT+AGG | - | chr7_4:27027348-27027367 | None:intergenic | 25.0% |
| ! | AGTGAAGTAAATGAATAAAG+CGG | + | chr7_4:27027427-27027446 | Msa1147650:intron | 25.0% |
| ! | CTATGTATCTTTGTAAAATC+TGG | + | chr7_4:27027484-27027503 | Msa1147650:intron | 25.0% |
| ! | TCTTAAAGCTGTATTATTCA+CGG | - | chr7_4:27027522-27027541 | None:intergenic | 25.0% |
| ! | TGTAACCGATTGATATAATA+AGG | - | chr7_4:27027671-27027690 | None:intergenic | 25.0% |
| !! | AATATGCACCCTTTAAAAAA+TGG | - | chr7_4:27027736-27027755 | None:intergenic | 25.0% |
| !!! | TTTTTTAAAGGGTGCATATT+AGG | + | chr7_4:27027736-27027755 | Msa1147650:intron | 25.0% |
| !!! | TTTTTAAAGGGTGCATATTA+GGG | + | chr7_4:27027737-27027756 | Msa1147650:intron | 25.0% |
| ! | CAAACTGTAACTGAATTATA+GGG | - | chr7_4:27027766-27027785 | None:intergenic | 25.0% |
| ! | AAACTACACAAACTTTATGA+TGG | - | chr7_4:27027986-27028005 | None:intergenic | 25.0% |
| !!! | ACTTATAGACTCTTTTGAAA+TGG | + | chr7_4:27028034-27028053 | Msa1147650:intron | 25.0% |
| ! | ACAGGATATAGTATATTAAC+AGG | - | chr7_4:27028103-27028122 | None:intergenic | 25.0% |
| !!! | CTAAAATCAATTTGTTACAC+AGG | - | chr7_4:27028203-27028222 | None:intergenic | 25.0% |
| !!! | ATTGATTTTAGTCAATACTC+TGG | + | chr7_4:27028212-27028231 | Msa1147650:intron | 25.0% |
| ! | ATCAGTCCAAATAATTTCAA+TGG | - | chr7_4:27028253-27028272 | None:intergenic | 25.0% |
| !!! | TTGGTCTTGTTATTTTACAA+TGG | + | chr7_4:27028586-27028605 | Msa1147650:three_prime_UTR | 25.0% |
| ! | TTCATAAGAATCCTAATTGT+GGG | - | chr7_4:27028751-27028770 | None:intergenic | 25.0% |
| ! | ATTCATAAGAATCCTAATTG+TGG | - | chr7_4:27028752-27028771 | None:intergenic | 25.0% |
| !!! | AAGTCATGATTCAGTTTTTT+CGG | - | chr7_4:27028783-27028802 | None:intergenic | 25.0% |
| ! | AAAAAACTGAATCATGACTT+GGG | + | chr7_4:27028783-27028802 | Msa1147650:three_prime_UTR | 25.0% |
| ! | TCTATTCTATGAAAGTTGTA+AGG | - | chr7_4:27028821-27028840 | None:intergenic | 25.0% |
| ! | TTGAGATTAGACTTGTAAAA+TGG | + | chr7_4:27028877-27028896 | Msa1147650:three_prime_UTR | 25.0% |
| AGCGAAGTTTATATTGTTCT+TGG | - | chr7_4:27025369-27025388 | None:intergenic | 30.0% | |
| TGTAGAAGATTGCAATATGA+AGG | + | chr7_4:27025477-27025496 | Msa1147650:exon | 30.0% | |
| !!! | TGTTTTGAGAAAGTGAAATG+TGG | + | chr7_4:27025856-27025875 | Msa1147650:intron | 30.0% |
| ATAATGTTTGATGTCAGTGT+AGG | - | chr7_4:27025920-27025939 | None:intergenic | 30.0% | |
| !!! | GGATACGTTTTTAAAATCAC+CGG | + | chr7_4:27026385-27026404 | Msa1147650:CDS | 30.0% |
| ATCCTAAAAATTACACTGAC+AGG | - | chr7_4:27026505-27026524 | None:intergenic | 30.0% | |
| ! | AACAGTATATTGTTGACTGT+AGG | + | chr7_4:27026538-27026557 | Msa1147650:intron | 30.0% |
| ! | TTTTCATTGTTCACATGAAC+AGG | + | chr7_4:27026744-27026763 | Msa1147650:intron | 30.0% |
| ! | AACTTGGTAATTGTGAAGAA+GGG | + | chr7_4:27026861-27026880 | Msa1147650:CDS | 30.0% |
| !! | CTTTTGTTGTAAATGTCCTA+CGG | - | chr7_4:27027016-27027035 | None:intergenic | 30.0% |
| TGTGGATGTGATATAATTCA+GGG | + | chr7_4:27027111-27027130 | Msa1147650:intron | 30.0% | |
| !! | TTTTTAAAGGGTCCAAACAT+GGG | + | chr7_4:27027154-27027173 | Msa1147650:intron | 30.0% |
| !! | TTCCATCAAGCTTTAAAACT+TGG | + | chr7_4:27027400-27027419 | Msa1147650:intron | 30.0% |
| !!! | TTCCAAGTTTTAAAGCTTGA+TGG | - | chr7_4:27027405-27027424 | None:intergenic | 30.0% |
| AACTTAACAAACATGTGTGT+TGG | + | chr7_4:27027547-27027566 | Msa1147650:intron | 30.0% | |
| TTTAAAAAATGGTCCAACCA+TGG | - | chr7_4:27027725-27027744 | None:intergenic | 30.0% | |
| !!! | ATGGTTGGACCATTTTTTAA+AGG | + | chr7_4:27027724-27027743 | Msa1147650:intron | 30.0% |
| !!! | TGGTTGGACCATTTTTTAAA+GGG | + | chr7_4:27027725-27027744 | Msa1147650:intron | 30.0% |
| !! | TTTTAAAGGGTGCATATTAG+GGG | + | chr7_4:27027738-27027757 | Msa1147650:intron | 30.0% |
| GCAAACTGTAACTGAATTAT+AGG | - | chr7_4:27027767-27027786 | None:intergenic | 30.0% | |
| TCACATAACTCATAACAGAA+GGG | - | chr7_4:27027849-27027868 | None:intergenic | 30.0% | |
| TTCACATAACTCATAACAGA+AGG | - | chr7_4:27027850-27027869 | None:intergenic | 30.0% | |
| CGATTCATTTACTCATTAGA+AGG | + | chr7_4:27027890-27027909 | Msa1147650:intron | 30.0% | |
| !!! | GTTTGTGTAGTTTTGTTGAT+TGG | + | chr7_4:27027993-27028012 | Msa1147650:intron | 30.0% |
| !!! | TGTTGATTGGTTTTAGTACT+TGG | + | chr7_4:27028006-27028025 | Msa1147650:intron | 30.0% |
| !! | AGTTTGGTGTCTAACATTAA+GGG | - | chr7_4:27028064-27028083 | None:intergenic | 30.0% |
| CTTAAATTATACACTACTCG+TGG | - | chr7_4:27028152-27028171 | None:intergenic | 30.0% | |
| !! | TTTAGTCAATACTCTGGTTT+TGG | + | chr7_4:27028218-27028237 | Msa1147650:intron | 30.0% |
| TTCAGGCCATTGAAATTATT+TGG | + | chr7_4:27028244-27028263 | Msa1147650:intron | 30.0% | |
| !! | TCTAAATGGTACTGGTTATT+TGG | + | chr7_4:27028295-27028314 | Msa1147650:intron | 30.0% |
| !! | GTAACTAGTCTTTGTATCTT+GGG | - | chr7_4:27028347-27028366 | None:intergenic | 30.0% |
| !! | AGTAACTAGTCTTTGTATCT+TGG | - | chr7_4:27028348-27028367 | None:intergenic | 30.0% |
| AAATAACAAGACCAAAACTG+TGG | - | chr7_4:27028581-27028600 | None:intergenic | 30.0% | |
| TCTGTCATGACAAATACAAA+TGG | + | chr7_4:27028610-27028629 | Msa1147650:three_prime_UTR | 30.0% | |
| GAAAAAACTGAATCATGACT+TGG | + | chr7_4:27028782-27028801 | Msa1147650:three_prime_UTR | 30.0% | |
| TAATCTCAATTTCGAGAACA+AGG | - | chr7_4:27028866-27028885 | None:intergenic | 30.0% | |
| ACGGTAAGAGGAAAAAACTA+GGG | - | chr7_4:27025402-27025421 | None:intergenic | 35.0% | |
| AACAAAAGCAACGAGAGTTA+GGG | - | chr7_4:27025519-27025538 | None:intergenic | 35.0% | |
| AAACAAAAGCAACGAGAGTT+AGG | - | chr7_4:27025520-27025539 | None:intergenic | 35.0% | |
| TCAACTTAACGTGTTAGTGT+CGG | - | chr7_4:27025944-27025963 | None:intergenic | 35.0% | |
| TTGATTGTAATCACATGTGC+TGG | + | chr7_4:27025994-27026013 | Msa1147650:intron | 35.0% | |
| ! | AATTTGCAGACGAGCATTTT+GGG | + | chr7_4:27026217-27026236 | Msa1147650:intron | 35.0% |
| ! | TGGTGCTAACAGGAATTTAA+AGG | + | chr7_4:27026364-27026383 | Msa1147650:intron | 35.0% |
| !!! | TACGTTTTTAAAATCACCGG+AGG | + | chr7_4:27026388-27026407 | Msa1147650:CDS | 35.0% |
| ! | AGCCTGTCAGTGTAATTTTT+AGG | + | chr7_4:27026500-27026519 | Msa1147650:intron | 35.0% |
| ! | AGTATATTGTTGACTGTAGG+TGG | + | chr7_4:27026541-27026560 | Msa1147650:intron | 35.0% |
| TTACCAAGTTCAGAACAGAA+AGG | - | chr7_4:27026851-27026870 | None:intergenic | 35.0% | |
| ! | GAACTTGGTAATTGTGAAGA+AGG | + | chr7_4:27026860-27026879 | Msa1147650:CDS | 35.0% |
| ! | TAGACAGGTTGAAAAGCTTA+CGG | - | chr7_4:27026959-27026978 | None:intergenic | 35.0% |
| ! | TAAGCTTTTCAACCTGTCTA+AGG | + | chr7_4:27026959-27026978 | Msa1147650:CDS | 35.0% |
| AGGACATTTACAACAAAAGC+TGG | + | chr7_4:27027017-27027036 | Msa1147650:CDS | 35.0% | |
| CTGTGGATGTGATATAATTC+AGG | + | chr7_4:27027110-27027129 | Msa1147650:intron | 35.0% | |
| GTGGATGTGATATAATTCAG+GGG | + | chr7_4:27027112-27027131 | Msa1147650:intron | 35.0% | |
| ! | TGTTTGGACCCTTTAAAAAG+AGG | - | chr7_4:27027153-27027172 | None:intergenic | 35.0% |
| !! | CTTTTTAAAGGGTCCAAACA+TGG | + | chr7_4:27027153-27027172 | Msa1147650:intron | 35.0% |
| AATTTGATACAGGCAATAGC+CGG | - | chr7_4:27027194-27027213 | None:intergenic | 35.0% | |
| TGTTATTCTGCTCAACTTGT+CGG | + | chr7_4:27027229-27027248 | Msa1147650:intron | 35.0% | |
| ATTACATCGGATATTGGACT+GGG | - | chr7_4:27027292-27027311 | None:intergenic | 35.0% | |
| ATCAAGAAGGATATTGGACT+GGG | - | chr7_4:27027316-27027335 | None:intergenic | 35.0% | |
| AATCAAGAAGGATATTGGAC+TGG | - | chr7_4:27027317-27027336 | None:intergenic | 35.0% | |
| TTAACAAACATGTGTGTTGG+AGG | + | chr7_4:27027550-27027569 | Msa1147650:intron | 35.0% | |
| TATCAATCGGTTACATTACC+TGG | + | chr7_4:27027676-27027695 | Msa1147650:intron | 35.0% | |
| CACATAACTCATAACAGAAG+GGG | - | chr7_4:27027848-27027867 | None:intergenic | 35.0% | |
| ! | TTTCCTAGAGTAGTGTCATT+TGG | + | chr7_4:27027939-27027958 | Msa1147650:intron | 35.0% |
| !! | CAGTTTGGTGTCTAACATTA+AGG | - | chr7_4:27028065-27028084 | None:intergenic | 35.0% |
| !!! | TACTCTGGTTTTGGTTATTC+AGG | + | chr7_4:27028227-27028246 | Msa1147650:intron | 35.0% |
| TTATTTGGTTGCAGGGAAAA+AGG | + | chr7_4:27028310-27028329 | Msa1147650:intron | 35.0% | |
| GTTTAGCAAAAAAGAGATCC+AGG | + | chr7_4:27028504-27028523 | Msa1147650:CDS | 35.0% | |
| CATTATATCCTCCCACAATT+AGG | + | chr7_4:27028737-27028756 | Msa1147650:three_prime_UTR | 35.0% | |
| ATAAGAATCCTAATTGTGGG+AGG | - | chr7_4:27028748-27028767 | None:intergenic | 35.0% | |
| !!! | CATGATTCAGTTTTTTCGGA+GGG | - | chr7_4:27028779-27028798 | None:intergenic | 35.0% |
| !!! | TCATGATTCAGTTTTTTCGG+AGG | - | chr7_4:27028780-27028799 | None:intergenic | 35.0% |
| TTGTAAAATGGTGCGAGTAT+AGG | + | chr7_4:27028889-27028908 | Msa1147650:three_prime_UTR | 35.0% | |
| CACGGTAAGAGGAAAAAACT+AGG | - | chr7_4:27025403-27025422 | None:intergenic | 40.0% | |
| !! | CATCGATTTCAAGCTTCTTC+TGG | - | chr7_4:27025656-27025675 | None:intergenic | 40.0% |
| ! | TGATGGACGGTGACAAATAT+TGG | + | chr7_4:27026017-27026036 | Msa1147650:intron | 40.0% |
| ! | GAATTTGCAGACGAGCATTT+TGG | + | chr7_4:27026216-27026235 | Msa1147650:intron | 40.0% |
| AGGATTTCACAAGAGGTCAA+TGG | + | chr7_4:27026245-27026264 | Msa1147650:CDS | 40.0% | |
| GGATTTCACAAGAGGTCAAT+GGG | + | chr7_4:27026246-27026265 | Msa1147650:CDS | 40.0% | |
| GATTTCACAAGAGGTCAATG+GGG | + | chr7_4:27026247-27026266 | Msa1147650:CDS | 40.0% | |
| GACATTTGCCATTATATCGC+TGG | + | chr7_4:27026344-27026363 | Msa1147650:intron | 40.0% | |
| TGTTAGCACCAGCGATATAA+TGG | - | chr7_4:27026355-27026374 | None:intergenic | 40.0% | |
| ! | ATTATATCGCTGGTGCTAAC+AGG | + | chr7_4:27026354-27026373 | Msa1147650:intron | 40.0% |
| ACAAGGATTTCCAATGAAGC+AGG | + | chr7_4:27026420-27026439 | Msa1147650:CDS | 40.0% | |
| CAAGGATTTCCAATGAAGCA+GGG | + | chr7_4:27026421-27026440 | Msa1147650:CDS | 40.0% | |
| AGTTCAGAACAGAAAGGTCT+GGG | - | chr7_4:27026845-27026864 | None:intergenic | 40.0% | |
| AAGTTCAGAACAGAAAGGTC+TGG | - | chr7_4:27026846-27026865 | None:intergenic | 40.0% | |
| ! | AGACCTTTCTGTTCTGAACT+TGG | + | chr7_4:27026845-27026864 | Msa1147650:CDS | 40.0% |
| AAGGGTGAGAATGATTTACC+CGG | + | chr7_4:27026879-27026898 | Msa1147650:CDS | 40.0% | |
| GTTGAAAAGCTTACGGATCT+TGG | - | chr7_4:27026952-27026971 | None:intergenic | 40.0% | |
| TCACATCATCATCCTTAGAC+AGG | - | chr7_4:27026974-27026993 | None:intergenic | 40.0% | |
| ! | TGTCTAAGGATGATGATGTG+AGG | + | chr7_4:27026973-27026992 | Msa1147650:CDS | 40.0% |
| TGTTGTAAATGTCCTACGGT+AGG | - | chr7_4:27027012-27027031 | None:intergenic | 40.0% | |
| ATTCAGGGGTAACCCTAATA+TGG | + | chr7_4:27027126-27027145 | Msa1147650:intron | 40.0% | |
| !! | AATAGCCGGTTAAGTTGAAG+AGG | - | chr7_4:27027180-27027199 | None:intergenic | 40.0% |
| TTACATCGGATATTGGACTG+GGG | - | chr7_4:27027291-27027310 | None:intergenic | 40.0% | |
| GATTACATCGGATATTGGAC+TGG | - | chr7_4:27027293-27027312 | None:intergenic | 40.0% | |
| ! | TATTGGACTGGGGATTACAT+CGG | - | chr7_4:27027281-27027300 | None:intergenic | 40.0% |
| TCAAGAAGGATATTGGACTG+GGG | - | chr7_4:27027315-27027334 | None:intergenic | 40.0% | |
| TGTGTTGGAGGAATGACAAA+GGG | + | chr7_4:27027562-27027581 | Msa1147650:intron | 40.0% | |
| TATCTCCAAGTCCAATTCCA+TGG | - | chr7_4:27027595-27027614 | None:intergenic | 40.0% | |
| GAGATAGAGGCAGCAATAAA+GGG | + | chr7_4:27027609-27027628 | Msa1147650:intron | 40.0% | |
| AGATAGAGGCAGCAATAAAG+GGG | + | chr7_4:27027610-27027629 | Msa1147650:intron | 40.0% | |
| GAACCAAATGACACTACTCT+AGG | - | chr7_4:27027945-27027964 | None:intergenic | 40.0% | |
| !! | GTAGTGTCATTTGGTTCATG+TGG | + | chr7_4:27027948-27027967 | Msa1147650:intron | 40.0% |
| CAAACTTTATGATGGCACCT+TGG | - | chr7_4:27027978-27027997 | None:intergenic | 40.0% | |
| CATGCTTCAGTAGTTCAGTT+TGG | - | chr7_4:27028080-27028099 | None:intergenic | 40.0% | |
| !! | GTACTGGTTATTTGGTTGCA+GGG | + | chr7_4:27028303-27028322 | Msa1147650:intron | 40.0% |
| !! | CTCTTTCTTTGGAGTGTAAG+AGG | - | chr7_4:27028371-27028390 | None:intergenic | 40.0% |
| CAATCCTTGCTCTCTTTCTT+TGG | - | chr7_4:27028382-27028401 | None:intergenic | 40.0% | |
| GGCGATTCTCTTCTTCTTAT+CGG | - | chr7_4:27028405-27028424 | None:intergenic | 40.0% | |
| TAAGAAGAAGAGAATCGCCA+AGG | + | chr7_4:27028406-27028425 | Msa1147650:CDS | 40.0% | |
| ! | TCATACCTTCACCACAGTTT+TGG | + | chr7_4:27028567-27028586 | Msa1147650:three_prime_UTR | 40.0% |
| CTCAATTTCGAGAACAAGGT+AGG | - | chr7_4:27028862-27028881 | None:intergenic | 40.0% | |
| AGCAACGAGAGTTAGGGTTA+CGG | - | chr7_4:27025513-27025532 | None:intergenic | 45.0% | |
| ! | GTAATCACATGTGCTGGTGA+TGG | + | chr7_4:27026000-27026019 | Msa1147650:intron | 45.0% |
| TGCTAGACAGTGACACATGT+GGG | + | chr7_4:27026044-27026063 | Msa1147650:intron | 45.0% | |
| CTCGTCTGCAAATTCAAGTC+AGG | - | chr7_4:27026211-27026230 | None:intergenic | 45.0% | |
| GGACAAGAGGATTTCACAAG+AGG | + | chr7_4:27026238-27026257 | Msa1147650:CDS | 45.0% | |
| ! | TCCTTGTTTGTCACAACCTC+CGG | - | chr7_4:27026407-27026426 | None:intergenic | 45.0% |
| TGTGAAGCAACAGACGAACA+CGG | - | chr7_4:27026462-27026481 | None:intergenic | 45.0% | |
| ! | TGTTCGTCTGTTGCTTCACA+GGG | + | chr7_4:27026462-27026481 | Msa1147650:CDS | 45.0% |
| CATCCTTGGCTTCTCAACAT+CGG | - | chr7_4:27026910-27026929 | None:intergenic | 45.0% | |
| AGTATGTCAACACCTACCGT+AGG | + | chr7_4:27026997-27027016 | Msa1147650:CDS | 45.0% | |
| AAGTTGAAGAGGCCCATGTT+TGG | - | chr7_4:27027169-27027188 | None:intergenic | 45.0% | |
| ATGGGCCTCTTCAACTTAAC+CGG | + | chr7_4:27027172-27027191 | Msa1147650:intron | 45.0% | |
| CTGGGGATTACATCGGATAT+TGG | - | chr7_4:27027298-27027317 | None:intergenic | 45.0% | |
| ! | AAAGCGGAAACAGTGCTACT+TGG | + | chr7_4:27027443-27027462 | Msa1147650:intron | 45.0% |
| !! | GGAAACAGTGCTACTTGGTA+AGG | + | chr7_4:27027448-27027467 | Msa1147650:intron | 45.0% |
| GTGTGTTGGAGGAATGACAA+AGG | + | chr7_4:27027561-27027580 | Msa1147650:intron | 45.0% | |
| GTGTTGGAGGAATGACAAAG+GGG | + | chr7_4:27027563-27027582 | Msa1147650:intron | 45.0% | |
| AGTGACCATGGAATTGGACT+TGG | + | chr7_4:27027587-27027606 | Msa1147650:intron | 45.0% | |
| GGAATTGGACTTGGAGATAG+AGG | + | chr7_4:27027596-27027615 | Msa1147650:intron | 45.0% | |
| GGAGATAGAGGCAGCAATAA+AGG | + | chr7_4:27027608-27027627 | Msa1147650:intron | 45.0% | |
| AGGTTGAACTAAGAGGTCCA+TGG | + | chr7_4:27027705-27027724 | Msa1147650:intron | 45.0% | |
| TGAACTAAGAGGTCCATGGT+TGG | + | chr7_4:27027709-27027728 | Msa1147650:intron | 45.0% | |
| TTGGTTCATGTGGCTTACCA+AGG | + | chr7_4:27027958-27027977 | Msa1147650:intron | 45.0% | |
| ! | ATGTTGACTGAGCAGCATAC+AGG | - | chr7_4:27028121-27028140 | None:intergenic | 45.0% |
| !! | GGTACTGGTTATTTGGTTGC+AGG | + | chr7_4:27028302-27028321 | Msa1147650:intron | 45.0% |
| CACTCCAAAGAAAGAGAGCA+AGG | + | chr7_4:27028375-27028394 | Msa1147650:CDS | 45.0% | |
| AATCGCCAAGGCAAAATCAG+AGG | + | chr7_4:27028418-27028437 | Msa1147650:CDS | 45.0% | |
| ATCCAGGATTTCCAGTGCTA+AGG | + | chr7_4:27028520-27028539 | Msa1147650:CDS | 45.0% | |
| ! | TGAAGGTATGACAGCAACCT+AGG | - | chr7_4:27028558-27028577 | None:intergenic | 45.0% |
| CAAGACCAAAACTGTGGTGA+AGG | - | chr7_4:27028575-27028594 | None:intergenic | 45.0% | |
| AAATGGTGCGAGTATAGGTG+TGG | + | chr7_4:27028894-27028913 | Msa1147650:three_prime_UTR | 45.0% | |
| !! | ACAAAATATTAAAATTATTT+AGG | - | chr7_4:27025770-27025789 | None:intergenic | 5.0% |
| GAATGCTGAAGACATGCGCA+CGG | - | chr7_4:27025421-27025440 | None:intergenic | 50.0% | |
| AACGAGAGTTAGGGTTACGG+TGG | - | chr7_4:27025510-27025529 | None:intergenic | 50.0% | |
| AATGTTGCGAATCCCACCAC+TGG | + | chr7_4:27025627-27025646 | Msa1147650:CDS | 50.0% | |
| TTCTTCTGGCATCCAGTGGT+GGG | - | chr7_4:27025642-27025661 | None:intergenic | 50.0% | |
| AAGCTTCTTCTGGCATCCAG+TGG | - | chr7_4:27025646-27025665 | None:intergenic | 50.0% | |
| !! | TCACATGTGCTGGTGATGGA+CGG | + | chr7_4:27026004-27026023 | Msa1147650:intron | 50.0% |
| GTGCTAGACAGTGACACATG+TGG | + | chr7_4:27026043-27026062 | Msa1147650:intron | 50.0% | |
| !!! | GACGAGCATTTTGGGACAAG+AGG | + | chr7_4:27026225-27026244 | Msa1147650:intron | 50.0% |
| ACCGGAGGTTGTGACAAACA+AGG | + | chr7_4:27026403-27026422 | Msa1147650:CDS | 50.0% | |
| ! | GTGTTCGTCTGTTGCTTCAC+AGG | + | chr7_4:27026461-27026480 | Msa1147650:CDS | 50.0% |
| ! | GTTCGTCTGTTGCTTCACAG+GGG | + | chr7_4:27026463-27026482 | Msa1147650:CDS | 50.0% |
| ACACTGACAGGCTACGCAAA+AGG | - | chr7_4:27026493-27026512 | None:intergenic | 50.0% | |
| ACAGGAACTCCTTGCTTTCG+TGG | + | chr7_4:27026762-27026781 | Msa1147650:intron | 50.0% | |
| CAGGAACTCCTTGCTTTCGT+GGG | + | chr7_4:27026763-27026782 | Msa1147650:intron | 50.0% | |
| TTGGCTTCTCAACATCGGTC+AGG | - | chr7_4:27026905-27026924 | None:intergenic | 50.0% | |
| TGACCGATGTTGAGAAGCCA+AGG | + | chr7_4:27026904-27026923 | Msa1147650:CDS | 50.0% | |
| GTTGAGAAGCCAAGGATGAG+AGG | + | chr7_4:27026912-27026931 | Msa1147650:CDS | 50.0% | |
| CTCTTAGGACCTCTCATCCT+TGG | - | chr7_4:27026924-27026943 | None:intergenic | 50.0% | |
| TGACAAAGGGGTAGTGACCA+TGG | + | chr7_4:27027575-27027594 | Msa1147650:intron | 50.0% | |
| AGGGGTAGTGACCATGGAAT+TGG | + | chr7_4:27027581-27027600 | Msa1147650:intron | 50.0% | |
| GTTACATTACCTGGTGCAGC+AGG | + | chr7_4:27027685-27027704 | Msa1147650:intron | 50.0% | |
| TTAGTTCAACCTGCTGCACC+AGG | - | chr7_4:27027697-27027716 | None:intergenic | 50.0% | |
| ! | GTGCAGCAGGTTGAACTAAG+AGG | + | chr7_4:27027698-27027717 | Msa1147650:intron | 50.0% |
| ! | AGCTGCCTCTGATTTTGCCT+TGG | - | chr7_4:27028426-27028445 | None:intergenic | 50.0% |
| ACCAGAAGCTTCTTGCTTCC+AGG | + | chr7_4:27028450-27028469 | Msa1147650:CDS | 50.0% | |
| ACCTGGAAGCAAGAAGCTTC+TGG | - | chr7_4:27028454-27028473 | None:intergenic | 50.0% | |
| ! | GCTTCTTGCTTCCAGGTTGA+AGG | + | chr7_4:27028457-27028476 | Msa1147650:CDS | 50.0% |
| ! | TGCCTTAGCACTGGAAATCC+TGG | - | chr7_4:27028525-27028544 | None:intergenic | 50.0% |
| AGGTATGACAGCAACCTAGG+CGG | - | chr7_4:27028555-27028574 | None:intergenic | 50.0% | |
| GAAGACATGCGCACGGTAAG+AGG | - | chr7_4:27025414-27025433 | None:intergenic | 55.0% | |
| TTCTACAACAACCGCCGCGT+CGG | - | chr7_4:27025464-27025483 | None:intergenic | 55.0% | |
| CTTCTTCTGGCATCCAGTGG+TGG | - | chr7_4:27025643-27025662 | None:intergenic | 55.0% | |
| GAGGTCAATGGGGATGCTCT+TGG | + | chr7_4:27026257-27026276 | Msa1147650:CDS | 55.0% | |
| CAATGGGGATGCTCTTGGTG+AGG | + | chr7_4:27026262-27026281 | Msa1147650:CDS | 55.0% | |
| GTCAGGACTCCCTGCTTCAT+TGG | - | chr7_4:27026433-27026452 | None:intergenic | 55.0% | |
| ACTCCTTGCTTTCGTGGGCA+TGG | + | chr7_4:27026768-27026787 | Msa1147650:CDS | 55.0% | |
| CTTCCATGCCCACGAAAGCA+AGG | - | chr7_4:27026774-27026793 | None:intergenic | 55.0% | |
| CTTGCTTTCGTGGGCATGGA+AGG | + | chr7_4:27026772-27026791 | Msa1147650:CDS | 55.0% | |
| GCTGACAATGCACCCACGAA+CGG | - | chr7_4:27026823-27026842 | None:intergenic | 55.0% | |
| TTCTCAACATCGGTCAGGCC+GGG | - | chr7_4:27026900-27026919 | None:intergenic | 55.0% | |
| CTTCTCAACATCGGTCAGGC+CGG | - | chr7_4:27026901-27026920 | None:intergenic | 55.0% | |
| CGGATCTTGGACGCTCTCTT+AGG | - | chr7_4:27026939-27026958 | None:intergenic | 55.0% | |
| CTCTCTCTGCTCCTTCAACC+TGG | - | chr7_4:27028471-27028490 | None:intergenic | 55.0% | |
| CAACAGACGAACACGGCCAG+GGG | - | chr7_4:27026455-27026474 | None:intergenic | 60.0% | |
| GCAACAGACGAACACGGCCA+GGG | - | chr7_4:27026456-27026475 | None:intergenic | 60.0% | |
| AGCAACAGACGAACACGGCC+AGG | - | chr7_4:27026457-27026476 | None:intergenic | 60.0% | |
| ! | CGTGGGCATGGAAGGCGTAA+TGG | + | chr7_4:27026780-27026799 | Msa1147650:CDS | 60.0% |
| ! | GAAGGCGTAATGGAGAGCGC+AGG | + | chr7_4:27026790-27026809 | Msa1147650:CDS | 60.0% |
| GCAGGAGGAAGTCCGTTCGT+GGG | + | chr7_4:27026808-27026827 | Msa1147650:CDS | 60.0% | |
| GGTGACAGCTGCCTTAGCAC+TGG | - | chr7_4:27028534-27028553 | None:intergenic | 60.0% | |
| TAAGGCAGCTGTCACCGCCT+AGG | + | chr7_4:27028538-27028557 | Msa1147650:CDS | 60.0% | |
| CTCTCCGAGACACTCCGACG+CGG | + | chr7_4:27025447-27025466 | Msa1147650:five_prime_UTR | 65.0% | |
| AAGCAGGGAGTCCTGACCCC+TGG | + | chr7_4:27026436-27026455 | Msa1147650:CDS | 65.0% | |
| ! | GGCGTAATGGAGAGCGCAGG+AGG | + | chr7_4:27026793-27026812 | Msa1147650:CDS | 65.0% |
| CGCAGGAGGAAGTCCGTTCG+TGG | + | chr7_4:27026807-27026826 | Msa1147650:CDS | 65.0% | |
| TCCGAGACACTCCGACGCGG+CGG | + | chr7_4:27025450-27025469 | Msa1147650:five_prime_UTR | 70.0% | |
| ! | ACCGCCGCGTCGGAGTGTCT+CGG | - | chr7_4:27025454-27025473 | None:intergenic | 70.0% |
| GACGAACACGGCCAGGGGTC+AGG | - | chr7_4:27026450-27026469 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 27025355 | 27028983 | 27025355 | ID=Msa1147650;Name=Msa1147650 |
| chr7_4 | mRNA | 27025355 | 27028983 | 27025355 | ID=Msa1147650-mRNA-1;Parent=Msa1147650;Name=Msa1147650-mRNA-1;_AED=0.01;_eAED=0.01;_QI=138|1|1|1|1|1|6|424|248 |
| chr7_4 | exon | 27025355 | 27025498 | 27025355 | ID=Msa1147650-mRNA-1:exon:6609;Parent=Msa1147650-mRNA-1 |
| chr7_4 | exon | 27025624 | 27025688 | 27025624 | ID=Msa1147650-mRNA-1:exon:6610;Parent=Msa1147650-mRNA-1 |
| chr7_4 | exon | 27026226 | 27026283 | 27026226 | ID=Msa1147650-mRNA-1:exon:6611;Parent=Msa1147650-mRNA-1 |
| chr7_4 | exon | 27026376 | 27026484 | 27026376 | ID=Msa1147650-mRNA-1:exon:6612;Parent=Msa1147650-mRNA-1 |
| chr7_4 | exon | 27026766 | 27027038 | 27026766 | ID=Msa1147650-mRNA-1:exon:6613;Parent=Msa1147650-mRNA-1 |
| chr7_4 | exon | 27028324 | 27028983 | 27028324 | ID=Msa1147650-mRNA-1:exon:6614;Parent=Msa1147650-mRNA-1 |
| chr7_4 | five_prime_UTR | 27025355 | 27025492 | 27025355 | ID=Msa1147650-mRNA-1:five_prime_utr;Parent=Msa1147650-mRNA-1 |
| chr7_4 | CDS | 27025493 | 27025498 | 27025493 | ID=Msa1147650-mRNA-1:cds;Parent=Msa1147650-mRNA-1 |
| chr7_4 | CDS | 27025624 | 27025688 | 27025624 | ID=Msa1147650-mRNA-1:cds;Parent=Msa1147650-mRNA-1 |
| chr7_4 | CDS | 27026226 | 27026283 | 27026226 | ID=Msa1147650-mRNA-1:cds;Parent=Msa1147650-mRNA-1 |
| chr7_4 | CDS | 27026376 | 27026484 | 27026376 | ID=Msa1147650-mRNA-1:cds;Parent=Msa1147650-mRNA-1 |
| chr7_4 | CDS | 27026766 | 27027038 | 27026766 | ID=Msa1147650-mRNA-1:cds;Parent=Msa1147650-mRNA-1 |
| chr7_4 | CDS | 27028324 | 27028559 | 27028324 | ID=Msa1147650-mRNA-1:cds;Parent=Msa1147650-mRNA-1 |
| chr7_4 | three_prime_UTR | 27028560 | 27028983 | 27028560 | ID=Msa1147650-mRNA-1:three_prime_utr;Parent=Msa1147650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
