Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060230 | XP_003622978.1 | 98.901 | 364 | 4 | 0 | 1 | 364 | 1 | 364 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060230 | G7L2B5 | 98.901 | 364 | 4 | 0 | 1 | 364 | 1 | 364 | 0.0 | 650 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0105370 | Msa1060230 | 0.801711 | 7.913822e-49 | -8.615850e-47 |
| Msa0120520 | Msa1060230 | 0.820287 | 7.428984e-53 | -8.615850e-47 |
| Msa0664560 | Msa1060230 | 0.807435 | 5.061198e-50 | -8.615850e-47 |
| Msa0698780 | Msa1060230 | 0.815593 | 8.539291e-52 | -8.615850e-47 |
| Msa0765080 | Msa1060230 | 0.845370 | 4.236554e-59 | -8.615850e-47 |
| Msa0189700 | Msa1060230 | 0.800610 | 1.329238e-48 | -8.615850e-47 |
| Msa0190240 | Msa1060230 | 0.804127 | 2.507885e-49 | -8.615850e-47 |
| Msa0229230 | Msa1060230 | 0.803852 | 2.860151e-49 | -8.615850e-47 |
| Msa0232010 | Msa1060230 | 0.803738 | 3.021271e-49 | -8.615850e-47 |
| Msa0232080 | Msa1060230 | 0.806536 | 7.843170e-50 | -8.615850e-47 |
| Msa0375310 | Msa1060230 | 0.847392 | 1.190171e-59 | -8.615850e-47 |
| Msa0396640 | Msa1060230 | -0.810638 | 1.043433e-50 | -8.615850e-47 |
| Msa0403710 | Msa1060230 | 0.801584 | 8.404862e-49 | -8.615850e-47 |
| Msa0421500 | Msa1060230 | 0.847015 | 1.510900e-59 | -8.615850e-47 |
| Msa0444170 | Msa1060230 | -0.826160 | 3.159913e-54 | -8.615850e-47 |
| Msa0456490 | Msa1060230 | 0.845373 | 4.229907e-59 | -8.615850e-47 |
| Msa1021470 | Msa1060230 | 0.905808 | 2.901374e-80 | -8.615850e-47 |
| Msa1021520 | Msa1060230 | 0.812239 | 4.685887e-51 | -8.615850e-47 |
| Msa1060230 | Msa1105460 | 0.926412 | 4.856258e-91 | -8.615850e-47 |
| Msa1060230 | Msa1126830 | 0.800935 | 1.140991e-48 | -8.615850e-47 |
| Msa1060230 | Msa1148910 | 0.917601 | 4.350535e-86 | -8.615850e-47 |
| Msa1060230 | Msa1205490 | 0.815554 | 8.711950e-52 | -8.615850e-47 |
| Msa1060230 | Msa1364480 | 0.824922 | 6.208675e-54 | -8.615850e-47 |
| Msa1060230 | Msa1365140 | 0.823583 | 1.281170e-53 | -8.615850e-47 |
| Msa1060230 | Msa1367890 | 0.807545 | 4.796788e-50 | -8.615850e-47 |
| Msa1060230 | Msa1397640 | 0.841882 | 3.629273e-58 | -8.615850e-47 |
| Msa1060230 | Msa1435390 | 0.810177 | 1.312104e-50 | -8.615850e-47 |
| Msa0258390 | Msa1060230 | 0.860445 | 2.056017e-63 | -8.615850e-47 |
| Msa0297610 | Msa1060230 | 0.830360 | 3.068595e-55 | -8.615850e-47 |
| Msa0335730 | Msa1060230 | 0.806155 | 9.434860e-50 | -8.615850e-47 |
| Msa0343500 | Msa1060230 | 0.811807 | 5.820289e-51 | -8.615850e-47 |
| Msa0350070 | Msa1060230 | -0.828893 | 6.979876e-55 | -8.615850e-47 |
| Msa0491730 | Msa1060230 | -0.806080 | 9.785025e-50 | -8.615850e-47 |
| Msa0513990 | Msa1060230 | 0.836858 | 7.314763e-57 | -8.615850e-47 |
| Msa0524110 | Msa1060230 | 0.827412 | 1.587437e-54 | -8.615850e-47 |
| Msa0581110 | Msa1060230 | 0.803641 | 3.164583e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060230 | MtrunA17_Chr7g0237631 | 98.901 | 364 | 4 | 0 | 1 | 364 | 1 | 364 | 0.0 | 650 |
| Msa1060230 | MtrunA17_Chr3g0129471 | 63.158 | 114 | 42 | 0 | 29 | 142 | 1 | 114 | 1.84e-45 | 155 |
| Msa1060230 | MtrunA17_Chr3g0129481 | 62.281 | 114 | 43 | 0 | 29 | 142 | 1 | 114 | 1.96e-45 | 154 |
| Msa1060230 | MtrunA17_Chr3g0129501 | 62.281 | 114 | 43 | 0 | 29 | 142 | 1 | 114 | 2.97e-45 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060230 | AT3G07030.2 | 63.902 | 205 | 66 | 3 | 1 | 200 | 1 | 202 | 1.39e-78 | 247 |
| Msa1060230 | AT3G07030.3 | 63.902 | 205 | 66 | 3 | 1 | 200 | 1 | 202 | 1.39e-78 | 247 |
| Msa1060230 | AT3G07030.4 | 63.902 | 205 | 66 | 3 | 1 | 200 | 1 | 202 | 1.74e-78 | 247 |
| Msa1060230 | AT3G07030.5 | 77.305 | 141 | 32 | 0 | 1 | 141 | 1 | 141 | 8.07e-76 | 241 |
| Msa1060230 | AT3G07030.1 | 74.510 | 153 | 37 | 1 | 1 | 153 | 1 | 151 | 5.50e-75 | 238 |
| Msa1060230 | AT1G20220.1 | 62.222 | 135 | 51 | 0 | 1 | 135 | 1 | 135 | 5.17e-54 | 181 |
Find 200 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTCATGAAACTGATT+TGG | 0.209849 | 7_2:-47945150 | Msa1060230:three_prime_UTR |
| GGAGGCAGAGGTGGAGGATA+TGG | 0.242926 | 7_2:-47945516 | Msa1060230:CDS |
| ATCTGTATCTGGTTTCTATA+TGG | 0.244819 | 7_2:-47945025 | Msa1060230:three_prime_UTR |
| GGTGGCAGGGGTGGAGGTTA+TGG | 0.269384 | 7_2:-47945585 | Msa1060230:CDS |
| CGAATAAATGGTTAAATAAA+AGG | 0.273057 | 7_2:-47949884 | Msa1060230:five_prime_UTR |
| GGCAGGGGAGGCAGGGGATA+TGG | 0.278931 | 7_2:-47945348 | Msa1060230:CDS |
| CAGAGGTTGCTGCTGATAAT+TGG | 0.289288 | 7_2:+47946453 | None:intergenic |
| TAGAGGGAGAGGTAGGAATT+GGG | 0.296049 | 7_2:-47946286 | Msa1060230:CDS |
| GGAGGGTATGGTGGAGGCAG+AGG | 0.303211 | 7_2:-47945528 | Msa1060230:CDS |
| ACTGGACGGAAGCGAATAAA+TGG | 0.309437 | 7_2:-47949896 | None:intergenic |
| GGCAGAGGTGGAGGGTATGG+TGG | 0.314076 | 7_2:-47945537 | Msa1060230:CDS |
| TTACGCCACTTCGCTTCTTC+AGG | 0.337074 | 7_2:-47949600 | Msa1060230:intron |
| TCTCTTCATGAAACTGATTT+GGG | 0.337371 | 7_2:-47945149 | Msa1060230:three_prime_UTR |
| GTAGAGGGAGAGGTAGGAAT+TGG | 0.337973 | 7_2:-47946287 | Msa1060230:CDS |
| GGAGGTCGAGGCAGAGGTTG+GGG | 0.340331 | 7_2:-47946047 | Msa1060230:CDS |
| AGGCAGAGGTGGAGGTGGTA+TGG | 0.341830 | 7_2:-47945412 | Msa1060230:CDS |
| GGGTATGGTGGAGGCAGAGG+TGG | 0.347375 | 7_2:-47945525 | Msa1060230:CDS |
| TTGATGGGAGTTTCAGGTTT+GGG | 0.347434 | 7_2:+47949674 | None:intergenic |
| GGAGGATATGGAGGAGGCAG+AGG | 0.356089 | 7_2:-47945504 | Msa1060230:CDS |
| AGGGGATATGGCCGTGGTAG+GGG | 0.356274 | 7_2:-47945336 | Msa1060230:CDS |
| GGAGGCAGAGGTGGAGGAAT+GGG | 0.356302 | 7_2:-47945444 | Msa1060230:CDS |
| GGGAGGTCGAGGCAGAGGTT+GGG | 0.358280 | 7_2:-47946048 | Msa1060230:CDS |
| GGAGGTTATGGAGGCAGAGG+TGG | 0.360488 | 7_2:-47945573 | Msa1060230:CDS |
| ATGGTGTTGGCAACCATAAA+AGG | 0.361711 | 7_2:+47945054 | None:intergenic |
| GGAGGTTATGAAGGTGGCAG+GGG | 0.362253 | 7_2:-47945597 | Msa1060230:CDS |
| ATCTCAATCACCTTGTCAAC+TGG | 0.366031 | 7_2:-47946712 | Msa1060230:CDS |
| AGAGGTAGGAATTGGGGAAG+GGG | 0.371584 | 7_2:-47946279 | Msa1060230:CDS |
| GGCAGAGGTGGTGGTTATGA+AGG | 0.375366 | 7_2:-47945489 | Msa1060230:CDS |
| GGTTATGAAGGTGGCAGGGG+TGG | 0.377101 | 7_2:-47945594 | Msa1060230:CDS |
| GGTTATGGAGGCAGAGGTGG+AGG | 0.378092 | 7_2:-47945570 | Msa1060230:CDS |
| ATGAAAGAGGCAGGGGAGGC+AGG | 0.389315 | 7_2:-47945356 | Msa1060230:CDS |
| GGCAGAGGTGGAGGTTATGA+AGG | 0.392200 | 7_2:-47945465 | Msa1060230:CDS |
| GGTGGTTACGGTGGCGGCAG+AGG | 0.397117 | 7_2:-47945693 | Msa1060230:CDS |
| AATTGGGGAAGGGGTGGTTA+TGG | 0.397399 | 7_2:-47946270 | Msa1060230:CDS |
| TTTGATTGTTCAGCAGTAGA+TGG | 0.398319 | 7_2:+47946484 | None:intergenic |
| GGAAGGGGAGAGAAATGAAT+TGG | 0.399132 | 7_2:+47949810 | None:intergenic |
| CAGGGGATATGGCCGTGGTA+GGG | 0.401235 | 7_2:-47945337 | Msa1060230:CDS |
| TATGAAGGTGGCAGGGGTGG+AGG | 0.404403 | 7_2:-47945591 | Msa1060230:CDS |
| TATGGTGGAGGCAGAGGTGG+AGG | 0.406225 | 7_2:-47945522 | Msa1060230:CDS |
| CGAGGTCGTGGTCGAGGTAG+AGG | 0.410909 | 7_2:-47946303 | Msa1060230:CDS |
| GGGTATTCTAATCGCGGCCG+AGG | 0.414512 | 7_2:-47946071 | Msa1060230:CDS |
| TACGGTGGCGGCAGAGGTGG+AGG | 0.416974 | 7_2:-47945687 | Msa1060230:CDS |
| TATGTAGGAGGCAGAGGTGG+AGG | 0.417081 | 7_2:-47945420 | Msa1060230:CDS |
| TATGAAGGAGGCAGAGGTGG+AGG | 0.418741 | 7_2:-47945450 | Msa1060230:CDS |
| TATGGAGGAGGCAGAGGTGG+TGG | 0.420030 | 7_2:-47945498 | Msa1060230:CDS |
| TACGAAGGAGGCAGAGGTGG+AGG | 0.420303 | 7_2:-47945546 | Msa1060230:CDS |
| CGGTACAAGACCCTCTTCAA+TGG | 0.422390 | 7_2:+47946856 | None:intergenic |
| GGCAGAGGTGGAGGTGGTAT+GGG | 0.422763 | 7_2:-47945411 | Msa1060230:CDS |
| AGAGGTAGAGAGAGAGAAGA+GGG | 0.423193 | 7_2:+47949737 | None:intergenic |
| GGAGGTTATGAAGGAGGCAG+AGG | 0.426160 | 7_2:-47945456 | Msa1060230:CDS |
| GGGGAGGTCGAGGCAGAGGT+TGG | 0.431992 | 7_2:-47946049 | Msa1060230:CDS |
| ATGGGTTATGTAGGAGGCAG+AGG | 0.432225 | 7_2:-47945426 | Msa1060230:CDS |
| GGTAGGAATTGGGGAAGGGG+TGG | 0.434417 | 7_2:-47946276 | Msa1060230:CDS |
| GGCAGGGGTGGAGGTTATGG+AGG | 0.435134 | 7_2:-47945582 | Msa1060230:CDS |
| GGAGGTTATGAAGGTGGTAG+AGG | 0.437789 | 7_2:-47945669 | Msa1060230:CDS |
| TATGAAGGTGGTAGAGGTGG+AGG | 0.441657 | 7_2:-47945663 | Msa1060230:CDS |
| GGAGGCAGAGGTGGAGGGTA+TGG | 0.444048 | 7_2:-47945540 | Msa1060230:CDS |
| TGACAAGGTGATTGAGATCA+TGG | 0.445665 | 7_2:+47946717 | None:intergenic |
| GGTTATGAAGGAGGCAGAGG+TGG | 0.447746 | 7_2:-47945453 | Msa1060230:CDS |
| GGTTACGGTGGCGGCAGAGG+TGG | 0.448266 | 7_2:-47945690 | Msa1060230:CDS |
| GGCAGAGGTGGAGGATATGG+AGG | 0.452442 | 7_2:-47945513 | Msa1060230:CDS |
| GTTGATGGGAGTTTCAGGTT+TGG | 0.453613 | 7_2:+47949673 | None:intergenic |
| TATGAAGGAGGCAGAGGTGG+AGG | 0.457131 | 7_2:-47945474 | Msa1060230:CDS |
| AGAGGGAGAGGTAGGAATTG+GGG | 0.457224 | 7_2:-47946285 | Msa1060230:CDS |
| AGGAGGCAGAGGTGGAGGAA+TGG | 0.458248 | 7_2:-47945445 | Msa1060230:CDS |
| GAGGTCGAGGCAGAGGTTGG+GGG | 0.460450 | 7_2:-47946046 | Msa1060230:CDS |
| ACACCCATTGCTATCATGCC+TGG | 0.462592 | 7_2:+47945277 | None:intergenic |
| GGAAATTATCAAGGTGGATA+CGG | 0.462645 | 7_2:-47946231 | Msa1060230:CDS |
| AGAGGTGGAGGTGGTTATGA+AGG | 0.463581 | 7_2:-47945651 | Msa1060230:CDS |
| TGTTCATCTTTAGATTTAGC+TGG | 0.463992 | 7_2:-47945118 | Msa1060230:three_prime_UTR |
| TTGCAGTATCTTGGTGCAAA+GGG | 0.465007 | 7_2:+47946912 | None:intergenic |
| AGGAGGCAGAGGTGGAGGTA+TGG | 0.467630 | 7_2:-47945382 | Msa1060230:CDS |
| TATGGCTATCAAGGTGGGTA+TGG | 0.468309 | 7_2:-47946252 | Msa1060230:CDS |
| CTGAGCTGATTGCAGTATCT+TGG | 0.471182 | 7_2:+47946903 | None:intergenic |
| AGCAAAAGAGATTGTCTTGA+AGG | 0.471497 | 7_2:-47947254 | Msa1060230:CDS |
| GGTGGTTATGAAGGTGGCAG+AGG | 0.471529 | 7_2:-47945642 | Msa1060230:CDS |
| GCAGGGGATATGGCCGTGGT+AGG | 0.471829 | 7_2:-47945338 | Msa1060230:CDS |
| GACTCGTATGGCCGAGGTCG+TGG | 0.474535 | 7_2:-47946315 | Msa1060230:CDS |
| GGTATTCTAATCGCGGCCGA+GGG | 0.475354 | 7_2:-47946070 | Msa1060230:CDS |
| GGAGGGTACGAAGGAGGCAG+AGG | 0.475761 | 7_2:-47945552 | Msa1060230:CDS |
| GAGATTGTCTTGAAGGCAAT+GGG | 0.476181 | 7_2:-47947247 | Msa1060230:CDS |
| TGAAAGAGGCAGGGGAGGCA+GGG | 0.477286 | 7_2:-47945355 | Msa1060230:CDS |
| ATGGATGGACGTGGTGGTAG+AGG | 0.477718 | 7_2:-47945309 | Msa1060230:CDS |
| GGTTATGAAGGAGGCAGAGG+TGG | 0.478456 | 7_2:-47945477 | Msa1060230:CDS |
| GGAGGCAGAGGTGGAGGTAT+GGG | 0.480716 | 7_2:-47945381 | Msa1060230:CDS |
| GTGGAGGTTATGAAGGTGGC+AGG | 0.481847 | 7_2:-47945599 | Msa1060230:CDS |
| TCTTATAATGCTGTAAATGA+AGG | 0.481848 | 7_2:-47946415 | Msa1060230:intron |
| GGTGGTTATGAAGGAGGCAG+AGG | 0.483538 | 7_2:-47945480 | Msa1060230:CDS |
| GGAGGCAGGGGATATGGCCG+TGG | 0.483577 | 7_2:-47945342 | Msa1060230:CDS |
| TAACCTTAAAACCCTAGAAA+AGG | 0.486941 | 7_2:+47949789 | None:intergenic |
| GTATGGGTTATGAAAGAGGC+AGG | 0.487261 | 7_2:-47945365 | Msa1060230:CDS |
| GGTGGAGGAATGGGTTATGT+AGG | 0.489046 | 7_2:-47945435 | Msa1060230:CDS |
| AGAGGTGGAGGGTATGGTGG+AGG | 0.489831 | 7_2:-47945534 | Msa1060230:CDS |
| GAATTGAACACAAATTCTCC+TGG | 0.491912 | 7_2:-47946688 | Msa1060230:CDS |
| GGTCGTGGTGGAGGTTATGA+AGG | 0.492926 | 7_2:-47945606 | Msa1060230:CDS |
| TATGAAGGTGGTCGTGGTGG+AGG | 0.494891 | 7_2:-47945615 | Msa1060230:CDS |
| GGGTACGAAGGAGGCAGAGG+TGG | 0.495025 | 7_2:-47945549 | Msa1060230:CDS |
| GGATATGGAGGAGGCAGAGG+TGG | 0.495944 | 7_2:-47945501 | Msa1060230:CDS |
| TGGCCGTGGTAGGGGAAGAA+TGG | 0.496897 | 7_2:-47945328 | Msa1060230:CDS |
| TACGAAGGAGGCAGAGGTGG+AGG | 0.500034 | 7_2:-47945387 | Msa1060230:CDS |
| GGTTATGAAGGTGGTAGAGG+TGG | 0.500241 | 7_2:-47945666 | Msa1060230:CDS |
| GGAGGAATGGGTTATGTAGG+AGG | 0.500534 | 7_2:-47945432 | Msa1060230:CDS |
| GGTGGCAGAGGTGGCTATGA+AGG | 0.502655 | 7_2:-47945630 | Msa1060230:CDS |
| GATAATTTGCATATCCACCT+TGG | 0.504702 | 7_2:+47946202 | None:intergenic |
| GAAAGAGGCAGGGGAGGCAG+GGG | 0.505244 | 7_2:-47945354 | Msa1060230:CDS |
| GAGAGGTAGGAATTGGGGAA+GGG | 0.510893 | 7_2:-47946280 | Msa1060230:CDS |
| GGTGGATATGCAAATTATCA+AGG | 0.512065 | 7_2:-47946198 | Msa1060230:intron |
| TGGAGGTTATGAAGGTGGCA+GGG | 0.512822 | 7_2:-47945598 | Msa1060230:CDS |
| TTTCTCTCTCTACCATGGAC+AGG | 0.513126 | 7_2:-47949715 | Msa1060230:exon |
| GGTGGAGGTTATGGAGGCAG+AGG | 0.517048 | 7_2:-47945576 | Msa1060230:CDS |
| GGCAGAGGTGGAGGTTATGA+AGG | 0.517385 | 7_2:-47945678 | Msa1060230:CDS |
| GGAGAGGTAGGAATTGGGGA+AGG | 0.518873 | 7_2:-47946281 | Msa1060230:CDS |
| TCATGAAACTGATTTGGGCA+AGG | 0.522891 | 7_2:-47945144 | Msa1060230:three_prime_UTR |
| GGAGGTATGGGTTATGAAAG+AGG | 0.523038 | 7_2:-47945369 | Msa1060230:CDS |
| CGTGGTCGAGGTAGAGGGAG+AGG | 0.524222 | 7_2:-47946297 | Msa1060230:CDS |
| AAACCAGGCATGATAGCAAT+GGG | 0.524237 | 7_2:-47945280 | Msa1060230:exon |
| GGTACAAGACCCTCTTCAAT+GGG | 0.524827 | 7_2:+47946857 | None:intergenic |
| GTAGGAGGCAGAGGTGGAGG+TGG | 0.525707 | 7_2:-47945417 | Msa1060230:CDS |
| GCATTATAAGAATCCTGTGC+TGG | 0.525963 | 7_2:+47946427 | None:intergenic |
| ATGGGTTACGAAGGAGGCAG+AGG | 0.532052 | 7_2:-47945393 | Msa1060230:CDS |
| GGTTATGTAGGAGGCAGAGG+TGG | 0.532100 | 7_2:-47945423 | Msa1060230:CDS |
| GAAAAGAAAAGAAAAGAGTG+AGG | 0.535355 | 7_2:-47949856 | Msa1060230:five_prime_UTR |
| GGTGGAGGTGGTTATGAAGG+TGG | 0.535779 | 7_2:-47945648 | Msa1060230:CDS |
| ATGGGTTATGAAAGAGGCAG+GGG | 0.536952 | 7_2:-47945363 | Msa1060230:CDS |
| TATGGCCGAGGTCGTGGTCG+AGG | 0.538984 | 7_2:-47946309 | Msa1060230:CDS |
| GAATCCTGTGCTGGTTTCAG+AGG | 0.539391 | 7_2:+47946436 | None:intergenic |
| GGTGGCTATGAAGGTGGTCG+TGG | 0.541622 | 7_2:-47945621 | Msa1060230:CDS |
| GATGGACGTGGTGGTAGAGG+TGG | 0.541630 | 7_2:-47945306 | Msa1060230:CDS |
| AAGAGGTAGAGAGAGAGAAG+AGG | 0.541921 | 7_2:+47949736 | None:intergenic |
| GGCTATGAAGGTGGTCGTGG+TGG | 0.544263 | 7_2:-47945618 | Msa1060230:CDS |
| GGCAGAGGTGGAGGGTACGA+AGG | 0.546349 | 7_2:-47945561 | Msa1060230:CDS |
| AGGGGTGGTTATGGCTATCA+AGG | 0.547547 | 7_2:-47946261 | Msa1060230:CDS |
| ATAACATAACTGCACTGTCA+AGG | 0.550539 | 7_2:+47945228 | None:intergenic |
| GGGAGAGAAATGAATTGGAA+AGG | 0.551529 | 7_2:+47949815 | None:intergenic |
| AGAGATTGTCTTGAAGGCAA+TGG | 0.551588 | 7_2:-47947248 | Msa1060230:CDS |
| CTTAAAACCCTAGAAAAGGA+AGG | 0.553581 | 7_2:+47949793 | None:intergenic |
| AGGTAGAGAGAGAGAAGAGG+GGG | 0.555655 | 7_2:+47949739 | None:intergenic |
| GGTGGGTATGGAAATTATCA+AGG | 0.557168 | 7_2:-47946240 | Msa1060230:CDS |
| GGAGAGAAATGAATTGGAAA+GGG | 0.557517 | 7_2:+47949816 | None:intergenic |
| ACCTCTTTCTCTCTCTACCA+TGG | 0.558263 | 7_2:-47949720 | Msa1060230:exon |
| TAACATAACTGCACTGTCAA+GGG | 0.561421 | 7_2:+47945229 | None:intergenic |
| GGTTACGAAGGAGGCAGAGG+TGG | 0.561639 | 7_2:-47945390 | Msa1060230:CDS |
| CGTGGTAGGGGAAGAATGGA+TGG | 0.561990 | 7_2:-47945324 | Msa1060230:CDS |
| TCCATGGTAGAGAGAGAAAG+AGG | 0.562293 | 7_2:+47949719 | None:intergenic |
| TTTCTAGACTCGTATGGCCG+AGG | 0.563458 | 7_2:-47946321 | Msa1060230:intron |
| GTCGAGGTAGAGGGAGAGGT+AGG | 0.564538 | 7_2:-47946293 | Msa1060230:CDS |
| GGTTATGAAGGTGGCAGAGG+TGG | 0.565556 | 7_2:-47945639 | Msa1060230:CDS |
| AGAGGTGGAGGGTACGAAGG+AGG | 0.566762 | 7_2:-47945558 | Msa1060230:CDS |
| TGATAGTATGATGTTGCTCA+TGG | 0.567858 | 7_2:-47945192 | Msa1060230:three_prime_UTR |
| TGGTAGAGGTGGAGAAAACC+AGG | 0.569362 | 7_2:-47945295 | Msa1060230:CDS |
| TTAAAACCCTAGAAAAGGAA+GGG | 0.574652 | 7_2:+47949794 | None:intergenic |
| GAAGGTGGTAGAGGTGGAGG+TGG | 0.574900 | 7_2:-47945660 | Msa1060230:CDS |
| ATTGCAGTATCTTGGTGCAA+AGG | 0.575004 | 7_2:+47946911 | None:intergenic |
| AACCTTCTGATACCTGTCCA+TGG | 0.575306 | 7_2:+47949703 | None:intergenic |
| GGTGGTATGGGTTACGAAGG+AGG | 0.575326 | 7_2:-47945399 | Msa1060230:CDS |
| AAAACCAGGCATGATAGCAA+TGG | 0.579456 | 7_2:-47945281 | Msa1060230:exon |
| TACCTTCAGAATCTCTGCAA+TGG | 0.580155 | 7_2:+47947201 | None:intergenic |
| ACGAAGGAGGCAGAGGTGGA+GGG | 0.581836 | 7_2:-47945545 | Msa1060230:CDS |
| GAGATCCGTATCACTACTCA+AGG | 0.583167 | 7_2:-47949644 | Msa1060230:CDS |
| GTGGTTATGGCTATCAAGGT+GGG | 0.583212 | 7_2:-47946257 | Msa1060230:CDS |
| AGTTAGCATAACAGATGTGT+GGG | 0.583306 | 7_2:-47946882 | Msa1060230:CDS |
| GTTCAATTCTCCAGTTGACA+AGG | 0.584863 | 7_2:+47946702 | None:intergenic |
| TGGCGCCTTGAGTAGTGATA+CGG | 0.584965 | 7_2:+47949639 | None:intergenic |
| GGTTATGAAAGAGGCAGGGG+AGG | 0.585553 | 7_2:-47945360 | Msa1060230:CDS |
| AGAGGTGGAGGATATGGAGG+AGG | 0.586063 | 7_2:-47945510 | Msa1060230:CDS |
| TATGGGTTATGAAAGAGGCA+GGG | 0.586895 | 7_2:-47945364 | Msa1060230:CDS |
| GAGGTCGTGGTCGAGGTAGA+GGG | 0.588127 | 7_2:-47946302 | Msa1060230:CDS |
| TGCTGCTGATAATTGGAGTG+TGG | 0.589124 | 7_2:+47946460 | None:intergenic |
| CTCTACCTCGACCACGACCT+CGG | 0.592109 | 7_2:+47946304 | None:intergenic |
| GGAAGAATGGATGGACGTGG+TGG | 0.593817 | 7_2:-47945315 | Msa1060230:CDS |
| TATTCTAATCGCGGCCGAGG+GGG | 0.597199 | 7_2:-47946068 | Msa1060230:CDS |
| GAGGTAGAGAGAGAGAAGAG+GGG | 0.603173 | 7_2:+47949738 | None:intergenic |
| GTGTGGGAGCCCATTGAAGA+GGG | 0.607655 | 7_2:-47946866 | Msa1060230:CDS |
| CGTGGTGGAGGTTATGAAGG+TGG | 0.609599 | 7_2:-47945603 | Msa1060230:CDS |
| TACCATGGACAGGTATCAGA+AGG | 0.610954 | 7_2:-47949705 | Msa1060230:exon |
| CAGTTAGCATAACAGATGTG+TGG | 0.612311 | 7_2:-47946883 | Msa1060230:CDS |
| GTAAGTGATGTAGTTACGAA+TGG | 0.612718 | 7_2:+47949619 | None:intergenic |
| GGTGGATACGGCTATTACCA+AGG | 0.612843 | 7_2:-47946219 | Msa1060230:CDS |
| AGAGGTGGTGGTTATGAAGG+AGG | 0.614413 | 7_2:-47945486 | Msa1060230:CDS |
| GGAGGTGGTATGGGTTACGA+AGG | 0.614581 | 7_2:-47945402 | Msa1060230:CDS |
| GGTGGTTATGGCTATCAAGG+TGG | 0.617759 | 7_2:-47946258 | Msa1060230:CDS |
| AATTGAACACAAATTCTCCT+GGG | 0.623115 | 7_2:-47946687 | Msa1060230:intron |
| TAAAACCCTAGAAAAGGAAG+GGG | 0.623768 | 7_2:+47949795 | None:intergenic |
| TGTGTGGGAGCCCATTGAAG+AGG | 0.624055 | 7_2:-47946867 | Msa1060230:CDS |
| TGCCATTGCAGAGATTCTGA+AGG | 0.625612 | 7_2:-47947203 | Msa1060230:intron |
| GGCAGAGGTGGCTATGAAGG+TGG | 0.627200 | 7_2:-47945627 | Msa1060230:CDS |
| GGTTCCTGACAGATAATGGT+GGG | 0.628649 | 7_2:-47946091 | Msa1060230:intron |
| CATCCATTCTTCCCCTACCA+CGG | 0.628907 | 7_2:+47945325 | None:intergenic |
| GTTATGGAGGCAGAGGTGGA+GGG | 0.630921 | 7_2:-47945569 | Msa1060230:CDS |
| AGAGGTGGAGGTTATGAAGG+AGG | 0.632338 | 7_2:-47945462 | Msa1060230:CDS |
| GCAACCTCTGAAACCAGCAC+AGG | 0.640267 | 7_2:-47946440 | Msa1060230:CDS |
| ATTGACCTGAAGAAGCGAAG+TGG | 0.643111 | 7_2:+47949595 | None:intergenic |
| AGAGGTGGAGGTTATGAAGG+TGG | 0.648731 | 7_2:-47945675 | Msa1060230:CDS |
| GGGTATGGAAATTATCAAGG+TGG | 0.649199 | 7_2:-47946237 | Msa1060230:CDS |
| AGGGGAAGAATGGATGGACG+TGG | 0.649748 | 7_2:-47945318 | Msa1060230:CDS |
| ATTGCAGTGTGGAAATGACT+CGG | 0.663461 | 7_2:-47946747 | Msa1060230:intron |
| TGCAGTATCTTGGTGCAAAG+GGG | 0.673020 | 7_2:+47946913 | None:intergenic |
| TGGTTCCTGACAGATAATGG+TGG | 0.678431 | 7_2:-47946092 | Msa1060230:intron |
| AATGGTGGGTATTCTAATCG+CGG | 0.696447 | 7_2:-47946077 | Msa1060230:CDS |
| GGATACGGCTATTACCAAGG+TGG | 0.753958 | 7_2:-47946216 | Msa1060230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTGCTTAATAATATTTTA+GGG | + | chr7_2:47946054-47946073 | None:intergenic | 10.0% |
| !!! | ATATTGCTTAATAATATTTT+AGG | + | chr7_2:47946055-47946074 | None:intergenic | 10.0% |
| !! | AAAATATTATTAAGCAATAT+TGG | - | chr7_2:47946055-47946074 | Msa1060230:CDS | 10.0% |
| !! | AAATATTATTAAGCAATATT+GGG | - | chr7_2:47946056-47946075 | Msa1060230:CDS | 10.0% |
| !! | AGATTAAAATTATAAAAACT+TGG | + | chr7_2:47947018-47947037 | None:intergenic | 10.0% |
| !! | ATATATATTAAACATGTAAA+AGG | + | chr7_2:47947205-47947224 | None:intergenic | 10.0% |
| !! | AAAAATTTAAAGAACATATA+AGG | + | chr7_2:47947649-47947668 | None:intergenic | 10.0% |
| !!! | TTAAGTTTTTATTGAAGTTT+TGG | - | chr7_2:47946169-47946188 | Msa1060230:intron | 15.0% |
| !! | ACAATATAATAATAGCTAAA+GGG | + | chr7_2:47946531-47946550 | None:intergenic | 15.0% |
| !! | TACAATATAATAATAGCTAA+AGG | + | chr7_2:47946532-47946551 | None:intergenic | 15.0% |
| !!! | ATGATATTTTTTAATGATCT+CGG | - | chr7_2:47946581-47946600 | Msa1060230:intron | 15.0% |
| !!! | GAATAAAAATCTTTTTTGAA+CGG | + | chr7_2:47947299-47947318 | None:intergenic | 15.0% |
| !!! | AAGTTTTTTATTCTAACTTT+TGG | + | chr7_2:47947779-47947798 | None:intergenic | 15.0% |
| !! | AGAATAAAAAACTTAAAATC+TGG | - | chr7_2:47947785-47947804 | Msa1060230:intron | 15.0% |
| !! | AAAATTTCAAACAAAACTTA+CGG | + | chr7_2:47947962-47947981 | None:intergenic | 15.0% |
| !!! | TCCATAATTTTTTTTCTATT+TGG | - | chr7_2:47947997-47948016 | Msa1060230:intron | 15.0% |
| !!! | CCATAATTTTTTTTCTATTT+GGG | - | chr7_2:47947998-47948017 | Msa1060230:intron | 15.0% |
| !! | TATATTAGCTATTCATTAAT+AGG | - | chr7_2:47948420-47948439 | Msa1060230:intron | 15.0% |
| !!! | AAAGAAAGTATAGATATAAT+AGG | + | chr7_2:47948923-47948942 | None:intergenic | 15.0% |
| !!! | TCAAATTTTTCACATTTTTA+AGG | - | chr7_2:47949081-47949100 | Msa1060230:intron | 15.0% |
| !!! | ATTGTTGATTAATGAAATGA+TGG | - | chr7_2:47945393-47945412 | Msa1060230:CDS | 20.0% |
| !!! | TTGTTGATTAATGAAATGAT+GGG | - | chr7_2:47945394-47945413 | Msa1060230:CDS | 20.0% |
| !!! | TTTTGTTGTTTTTGTTTTTG+TGG | - | chr7_2:47945570-47945589 | Msa1060230:CDS | 20.0% |
| !!! | TTTGTTGTTTTTGTTTTTGT+GGG | - | chr7_2:47945571-47945590 | Msa1060230:CDS | 20.0% |
| !! | TAAAAATTCTTGAGCAATAT+TGG | - | chr7_2:47945942-47945961 | Msa1060230:intron | 20.0% |
| !! | AAAAATTCTTGAGCAATATT+GGG | - | chr7_2:47945943-47945962 | Msa1060230:intron | 20.0% |
| !! | AAATTGGAGATGTTAAAATT+AGG | - | chr7_2:47946079-47946098 | Msa1060230:CDS | 20.0% |
| !! | TACTGAAATAATAATCCATT+AGG | + | chr7_2:47946231-47946250 | None:intergenic | 20.0% |
| !!! | TTGTAAGTTGAAACAAAATT+TGG | - | chr7_2:47946446-47946465 | Msa1060230:CDS | 20.0% |
| !! | AAAACTACTAAATCACTTTA+AGG | - | chr7_2:47946478-47946497 | Msa1060230:CDS | 20.0% |
| !! | AAACTACTAAATCACTTTAA+GGG | - | chr7_2:47946479-47946498 | Msa1060230:CDS | 20.0% |
| !! | GTCAGAAAAATTGAAAATTA+TGG | + | chr7_2:47947048-47947067 | None:intergenic | 20.0% |
| !!! | ATTTTTCTGACTTCAATATA+TGG | - | chr7_2:47947057-47947076 | Msa1060230:intron | 20.0% |
| !! | TGAAACTTATGTTTAAATTC+AGG | - | chr7_2:47947108-47947127 | Msa1060230:intron | 20.0% |
| !! | TATTAAACATGTAAAAGGAA+CGG | + | chr7_2:47947200-47947219 | None:intergenic | 20.0% |
| !!! | AAAGATTTTTATTCTTACTG+TGG | - | chr7_2:47947305-47947324 | Msa1060230:intron | 20.0% |
| !!! | TAATTTCAGGTAAATGAAAT+AGG | + | chr7_2:47947412-47947431 | None:intergenic | 20.0% |
| !! | AATTATCTTACTGCAAAAAT+AGG | + | chr7_2:47947438-47947457 | None:intergenic | 20.0% |
| !! | GATAATTCAAATACTGTAAT+TGG | - | chr7_2:47947451-47947470 | Msa1060230:intron | 20.0% |
| !! | AAATACAAAACGTTATAAGA+TGG | + | chr7_2:47947506-47947525 | None:intergenic | 20.0% |
| !! | AATTTAAAGAACATATAAGG+AGG | + | chr7_2:47947646-47947665 | None:intergenic | 20.0% |
| !! | CCCAAATAGAAAAAAAATTA+TGG | + | chr7_2:47948001-47948020 | None:intergenic | 20.0% |
| !!! | TAATTTTTTTTCTATTTGGG+TGG | - | chr7_2:47948001-47948020 | Msa1060230:intron | 20.0% |
| !! | TTCATTATCATCAGATAATA+CGG | + | chr7_2:47948811-47948830 | None:intergenic | 20.0% |
| !!! | AATTTTTCACATTTTTAAGG+TGG | - | chr7_2:47949084-47949103 | Msa1060230:intron | 20.0% |
| !! | GAGAAAAAAAACATAAATGA+TGG | + | chr7_2:47949630-47949649 | None:intergenic | 20.0% |
| !!! | TAGGGTTTTAAGGTTATTTA+GGG | - | chr7_2:47945013-47945032 | Msa1060230:three_prime_UTR | 25.0% |
| !!! | TTTTTGTTGTTGTTTTTGTG+TGG | - | chr7_2:47945298-47945317 | Msa1060230:CDS | 25.0% |
| !! | TGTTGATGTTATTTAGAACT+TGG | - | chr7_2:47945475-47945494 | Msa1060230:CDS | 25.0% |
| ! | CTGTTTATCAAATTAAAGCA+CGG | + | chr7_2:47945861-47945880 | None:intergenic | 25.0% |
| ! | ATTTGATAAACAGTTCAACA+CGG | - | chr7_2:47945868-47945887 | Msa1060230:intron | 25.0% |
| ! | ATTAAGCAATATTGGGAAAT+TGG | - | chr7_2:47946063-47946082 | Msa1060230:CDS | 25.0% |
| ! | AAACAATGCCTATGTTTAAA+AGG | - | chr7_2:47946259-47946278 | Msa1060230:CDS | 25.0% |
| ! | AACAATGCCTATGTTTAAAA+GGG | - | chr7_2:47946260-47946279 | Msa1060230:CDS | 25.0% |
| !! | CATATATCCCTTTTAAACAT+AGG | + | chr7_2:47946270-47946289 | None:intergenic | 25.0% |
| ! | AACTACTAAATCACTTTAAG+GGG | - | chr7_2:47946480-47946499 | Msa1060230:CDS | 25.0% |
| ! | TCTTCTTTACAATAGATACT+AGG | - | chr7_2:47946688-47946707 | Msa1060230:CDS | 25.0% |
| ! | CTTCTTTACAATAGATACTA+GGG | - | chr7_2:47946689-47946708 | Msa1060230:CDS | 25.0% |
| !!! | ATTTTAATGACAAACTCAAG+TGG | + | chr7_2:47947358-47947377 | None:intergenic | 25.0% |
| ! | CAAAAATAGGTGATAATTTC+AGG | + | chr7_2:47947425-47947444 | None:intergenic | 25.0% |
| ! | GAAGGTAACTTGAAAATAAT+TGG | - | chr7_2:47947701-47947720 | Msa1060230:intron | 25.0% |
| ! | AACTTGAAAATAATTGGCAA+TGG | - | chr7_2:47947707-47947726 | Msa1060230:intron | 25.0% |
| ! | ACCTTTAGATTTATTGAAGA+GGG | + | chr7_2:47947753-47947772 | None:intergenic | 25.0% |
| ! | AACCTTTAGATTTATTGAAG+AGG | + | chr7_2:47947754-47947773 | None:intergenic | 25.0% |
| !!! | TCATATTGATTTTCTGTGAT+TGG | - | chr7_2:47947829-47947848 | Msa1060230:intron | 25.0% |
| !!! | TGTTTGAAATTTTAACGTTC+TGG | - | chr7_2:47947969-47947988 | Msa1060230:intron | 25.0% |
| ! | ATTGTTGATATTCAACAACT+TGG | + | chr7_2:47948027-47948046 | None:intergenic | 25.0% |
| ! | CAAGATCATGAAAATAGTTA+CGG | + | chr7_2:47948140-47948159 | None:intergenic | 25.0% |
| ! | AAATAGTCCAACTGAATAAA+AGG | + | chr7_2:47948171-47948190 | None:intergenic | 25.0% |
| !!! | TTATATTTTGAATCCATTCC+TGG | - | chr7_2:47948233-47948252 | Msa1060230:intron | 25.0% |
| ! | GTCTATATGATTTCATGTTT+AGG | - | chr7_2:47948279-47948298 | Msa1060230:intron | 25.0% |
| ! | TCTTATAATGCTGTAAATGA+AGG | - | chr7_2:47948380-47948399 | Msa1060230:intron | 25.0% |
| ! | TCATTATCATCAGATAATAC+GGG | + | chr7_2:47948810-47948829 | None:intergenic | 25.0% |
| !! | CTATACTTTCTTTTCTATTC+TGG | - | chr7_2:47948930-47948949 | Msa1060230:intron | 25.0% |
| !! | AGTTTTCCATATTTGATTGA+TGG | + | chr7_2:47949009-47949028 | None:intergenic | 25.0% |
| !!! | AACTGTTTTTGTATTTGTGA+AGG | - | chr7_2:47949025-47949044 | Msa1060230:intron | 25.0% |
| !! | GTAATTCATTACACCTTTTA+TGG | - | chr7_2:47949728-47949747 | Msa1060230:five_prime_UTR | 25.0% |
| ! | TACAGATAAAAATATGGTGT+TGG | + | chr7_2:47949757-47949776 | None:intergenic | 25.0% |
| !!! | ACCATATTTTTATCTGTATC+TGG | - | chr7_2:47949759-47949778 | Msa1060230:five_prime_UTR | 25.0% |
| ! | ACCAGATACAGATAAAAATA+TGG | + | chr7_2:47949763-47949782 | None:intergenic | 25.0% |
| GAAAAGAAAAGAAAAGAGTG+AGG | - | chr7_2:47944939-47944958 | Msa1060230:three_prime_UTR | 30.0% | |
| ! | AAAGAAAAGAGTGAGGTTTT+AGG | - | chr7_2:47944946-47944965 | Msa1060230:three_prime_UTR | 30.0% |
| TTAAAACCCTAGAAAAGGAA+GGG | + | chr7_2:47945004-47945023 | None:intergenic | 30.0% | |
| TAACCTTAAAACCCTAGAAA+AGG | + | chr7_2:47945009-47945028 | None:intergenic | 30.0% | |
| !!! | CTAGGGTTTTAAGGTTATTT+AGG | - | chr7_2:47945012-47945031 | Msa1060230:three_prime_UTR | 30.0% |
| ! | ATTCACGATGTTTTCGTTTT+TGG | - | chr7_2:47945256-47945275 | Msa1060230:three_prime_UTR | 30.0% |
| !! | TTCACGATGTTTTCGTTTTT+GGG | - | chr7_2:47945257-47945276 | Msa1060230:three_prime_UTR | 30.0% |
| !!! | TTTTTGGGTTGTGTTTATTG+TGG | - | chr7_2:47945272-47945291 | Msa1060230:exon | 30.0% |
| !! | GTGGCATTTTAAGAAATGTT+TGG | - | chr7_2:47945317-47945336 | Msa1060230:CDS | 30.0% |
| ! | TGTTATTTAGAACTTGGTAG+TGG | - | chr7_2:47945481-47945500 | Msa1060230:CDS | 30.0% |
| ! | CTGTTTGTTGAAATGATTGT+AGG | - | chr7_2:47945513-47945532 | Msa1060230:CDS | 30.0% |
| ! | CCATTTTCCCAAATTTTTAC+CGG | - | chr7_2:47945707-47945726 | Msa1060230:intron | 30.0% |
| !!! | TAACTTTTTGGAATCTACTC+TGG | - | chr7_2:47945800-47945819 | Msa1060230:intron | 30.0% |
| !! | TACTCTGGTTTCGTTTATTT+TGG | - | chr7_2:47945815-47945834 | Msa1060230:intron | 30.0% |
| !! | ACTCTGGTTTCGTTTATTTT+GGG | - | chr7_2:47945816-47945835 | Msa1060230:intron | 30.0% |
| TCATACTAAACGCAATAATG+TGG | - | chr7_2:47945894-47945913 | Msa1060230:intron | 30.0% | |
| GAATGTATCAGATTAAAGCA+TGG | - | chr7_2:47946010-47946029 | Msa1060230:intron | 30.0% | |
| !!! | GAAGTTTTGGTTCTCAAATA+TGG | - | chr7_2:47946182-47946201 | Msa1060230:intron | 30.0% |
| ATACGAAGTTACAAACCTAA+TGG | - | chr7_2:47946213-47946232 | Msa1060230:CDS | 30.0% | |
| ATTGTAAAGAAGACTAACAG+AGG | + | chr7_2:47946681-47946700 | None:intergenic | 30.0% | |
| ! | AAAAGTTTTTACTCTTGCGT+TGG | - | chr7_2:47946815-47946834 | Msa1060230:intron | 30.0% |
| AAATGGTTATGGGAGTTTAT+TGG | + | chr7_2:47946910-47946929 | None:intergenic | 30.0% | |
| AATAAACTCCCATAACCATT+TGG | - | chr7_2:47946909-47946928 | Msa1060230:CDS | 30.0% | |
| CTGAATTACCAAATGGTTAT+GGG | + | chr7_2:47946920-47946939 | None:intergenic | 30.0% | |
| ACTGAATTACCAAATGGTTA+TGG | + | chr7_2:47946921-47946940 | None:intergenic | 30.0% | |
| ! | TAACCATTTGGTAATTCAGT+AGG | - | chr7_2:47946921-47946940 | Msa1060230:CDS | 30.0% |
| TATCCTACTGAATTACCAAA+TGG | + | chr7_2:47946927-47946946 | None:intergenic | 30.0% | |
| TTCAGGTAAATGAAATAGGA+GGG | + | chr7_2:47947408-47947427 | None:intergenic | 30.0% | |
| ! | TTTCAGGTAAATGAAATAGG+AGG | + | chr7_2:47947409-47947428 | None:intergenic | 30.0% |
| ! | TAACGTTTTGTATTTCATCC+AGG | - | chr7_2:47947511-47947530 | Msa1060230:intron | 30.0% |
| TCCCTCTTCAATAAATCTAA+AGG | - | chr7_2:47947749-47947768 | Msa1060230:intron | 30.0% | |
| TATCAACAATTATTGCAGTG+TGG | - | chr7_2:47948037-47948056 | Msa1060230:intron | 30.0% | |
| AATTGAACACAAATTCTCCT+GGG | - | chr7_2:47948108-47948127 | Msa1060230:intron | 30.0% | |
| ! | TTACGTTCCTTTTATTCAGT+TGG | - | chr7_2:47948161-47948180 | Msa1060230:intron | 30.0% |
| ! | TTCTTGTTATAACAGCTTCT+TGG | - | chr7_2:47948189-47948208 | Msa1060230:intron | 30.0% |
| ! | TCTTGTTATAACAGCTTCTT+GGG | - | chr7_2:47948190-47948209 | Msa1060230:intron | 30.0% |
| AAATACTAGTCAAACAATCC+AGG | + | chr7_2:47948254-47948273 | None:intergenic | 30.0% | |
| AGATGTGCTAAAAGTTAGAA+TGG | + | chr7_2:47948446-47948465 | None:intergenic | 30.0% | |
| ! | TATCTTTTTCTAGACTCGTA+TGG | - | chr7_2:47948468-47948487 | Msa1060230:intron | 30.0% |
| GTACTATAATGCTAAAATCC+AGG | + | chr7_2:47948637-47948656 | None:intergenic | 30.0% | |
| !! | AAGTTTACTTTTGTTGTGCT+TGG | - | chr7_2:47948683-47948702 | Msa1060230:intron | 30.0% |
| ! | TGATGATAATGAATGTCTTC+AGG | - | chr7_2:47948818-47948837 | Msa1060230:intron | 30.0% |
| ! | TACTTTCTTTTCTATTCTGG+AGG | - | chr7_2:47948933-47948952 | Msa1060230:intron | 30.0% |
| TATGCTCCATCAATCAAATA+TGG | - | chr7_2:47949000-47949019 | Msa1060230:intron | 30.0% | |
| GCTTATGATCAGATTAAACA+TGG | + | chr7_2:47949055-47949074 | None:intergenic | 30.0% | |
| !!! | TCACATTTTTAAGGTGGTTA+CGG | - | chr7_2:47949090-47949109 | Msa1060230:intron | 30.0% |
| TTCTCTTCATGAAACTGATT+TGG | - | chr7_2:47949645-47949664 | Msa1060230:CDS | 30.0% | |
| ! | TCTCTTCATGAAACTGATTT+GGG | - | chr7_2:47949646-47949665 | Msa1060230:CDS | 30.0% |
| TGTTCATCTTTAGATTTAGC+TGG | - | chr7_2:47949677-47949696 | Msa1060230:CDS | 30.0% | |
| ! | ATCTGTATCTGGTTTCTATA+TGG | - | chr7_2:47949770-47949789 | Msa1060230:five_prime_UTR | 30.0% |
| ! | GTTTTGTGTATACTAGAAAG+TGG | - | chr7_2:47949862-47949881 | Msa1060230:five_prime_UTR | 30.0% |
| GGAGAGAAATGAATTGGAAA+GGG | + | chr7_2:47944982-47945001 | None:intergenic | 35.0% | |
| TAAAACCCTAGAAAAGGAAG+GGG | + | chr7_2:47945003-47945022 | None:intergenic | 35.0% | |
| CTTAAAACCCTAGAAAAGGA+AGG | + | chr7_2:47945005-47945024 | None:intergenic | 35.0% | |
| !!! | CTTCCTTTTCTAGGGTTTTA+AGG | - | chr7_2:47945003-47945022 | Msa1060230:three_prime_UTR | 35.0% |
| GTAAGTGATGTAGTTACGAA+TGG | + | chr7_2:47945179-47945198 | None:intergenic | 35.0% | |
| TTGAATCTTGTCAGCATTTC+TGG | - | chr7_2:47945600-47945619 | Msa1060230:CDS | 35.0% | |
| CCGGTAAAAATTTGGGAAAA+TGG | + | chr7_2:47945710-47945729 | None:intergenic | 35.0% | |
| GTCAACACCGGTAAAAATTT+GGG | + | chr7_2:47945717-47945736 | None:intergenic | 35.0% | |
| !!! | CTCTGGTTTCGTTTATTTTG+GGG | - | chr7_2:47945817-47945836 | Msa1060230:intron | 35.0% |
| ACTAAACGCAATAATGTGGA+TGG | - | chr7_2:47945898-47945917 | Msa1060230:intron | 35.0% | |
| ATCTGATACACAGTTCAACA+TGG | + | chr7_2:47945981-47946000 | None:intergenic | 35.0% | |
| CTGTGTATCAGATTAAACCA+CGG | - | chr7_2:47945988-47946007 | Msa1060230:intron | 35.0% | |
| CTTTAATCTGATACATTCCG+TGG | + | chr7_2:47946008-47946027 | None:intergenic | 35.0% | |
| ! | AAGGAGGTAAAAAGGTACAA+GGG | + | chr7_2:47946370-47946389 | None:intergenic | 35.0% |
| ! | AAAGGAGGTAAAAAGGTACA+AGG | + | chr7_2:47946371-47946390 | None:intergenic | 35.0% |
| ATACTACAACACAGAAGGAA+AGG | + | chr7_2:47946389-47946408 | None:intergenic | 35.0% | |
| ! | GGTTAGGGTTTTCTTTAGTT+AGG | - | chr7_2:47946416-47946435 | Msa1060230:CDS | 35.0% |
| ! | ACTAAATCACTTTAAGGGGT+TGG | - | chr7_2:47946484-47946503 | Msa1060230:CDS | 35.0% |
| GTACAAATGGAGGTTCAATT+AGG | + | chr7_2:47946654-47946673 | None:intergenic | 35.0% | |
| AATTGAACCTCCATTTGTAC+TGG | - | chr7_2:47946654-47946673 | Msa1060230:intron | 35.0% | |
| ATTGAACCTCCATTTGTACT+GGG | - | chr7_2:47946655-47946674 | Msa1060230:intron | 35.0% | |
| AGCAAAAGAGATTGTCTTGA+AGG | - | chr7_2:47947541-47947560 | Msa1060230:intron | 35.0% | |
| !! | TAGCATATGTTTCTGGTAGA+AGG | - | chr7_2:47947683-47947702 | Msa1060230:intron | 35.0% |
| TCAATCTGCTTAAACAGAAG+AGG | - | chr7_2:47947855-47947874 | Msa1060230:intron | 35.0% | |
| AGTTAGCATAACAGATGTGT+GGG | - | chr7_2:47947913-47947932 | Msa1060230:intron | 35.0% | |
| GAATTGAACACAAATTCTCC+TGG | - | chr7_2:47948107-47948126 | Msa1060230:intron | 35.0% | |
| ! | CTTGTTATAACAGCTTCTTG+GGG | - | chr7_2:47948191-47948210 | Msa1060230:intron | 35.0% |
| TTTGATTGTTCAGCAGTAGA+TGG | + | chr7_2:47948314-47948333 | None:intergenic | 35.0% | |
| GGAAATTATCAAGGTGGATA+CGG | - | chr7_2:47948564-47948583 | Msa1060230:intron | 35.0% | |
| ! | GATAATTTGCATATCCACCT+TGG | + | chr7_2:47948596-47948615 | None:intergenic | 35.0% |
| GGTGGATATGCAAATTATCA+AGG | - | chr7_2:47948597-47948616 | Msa1060230:intron | 35.0% | |
| AAGGTACAAATTCTGAATCC+TGG | - | chr7_2:47948616-47948635 | Msa1060230:intron | 35.0% | |
| TTATCATCAGATAATACGGG+AGG | + | chr7_2:47948807-47948826 | None:intergenic | 35.0% | |
| ATAAACTCAGGAAACCATCT+CGG | + | chr7_2:47948859-47948878 | None:intergenic | 35.0% | |
| TAACATAACTGCACTGTCAA+GGG | + | chr7_2:47949569-47949588 | None:intergenic | 35.0% | |
| ATAACATAACTGCACTGTCA+AGG | + | chr7_2:47949570-47949589 | None:intergenic | 35.0% | |
| TGATAGTATGATGTTGCTCA+TGG | - | chr7_2:47949603-47949622 | Msa1060230:CDS | 35.0% | |
| !! | TTAGCTGGAAAAAGCATCTT+TGG | - | chr7_2:47949692-47949711 | Msa1060230:CDS | 35.0% |
| GGGAGAGAAATGAATTGGAA+AGG | + | chr7_2:47944983-47945002 | None:intergenic | 40.0% | |
| GGGGGTGAATGAAAATGAAA+TGG | + | chr7_2:47945041-47945060 | None:intergenic | 40.0% | |
| !! | TTGATGGGAGTTTCAGGTTT+GGG | + | chr7_2:47945124-47945143 | None:intergenic | 40.0% |
| !! | TTTTCGTTGATGGGAGTTTC+AGG | + | chr7_2:47945130-47945149 | None:intergenic | 40.0% |
| ! | CGGATCTCATTTTCGTTGAT+GGG | + | chr7_2:47945139-47945158 | None:intergenic | 40.0% |
| ! | ACGGATCTCATTTTCGTTGA+TGG | + | chr7_2:47945140-47945159 | None:intergenic | 40.0% |
| CGTCAACACCGGTAAAAATT+TGG | + | chr7_2:47945718-47945737 | None:intergenic | 40.0% | |
| GTAAGTCGTATGTCTGTTCT+GGG | - | chr7_2:47945776-47945795 | Msa1060230:intron | 40.0% | |
| TAAGTCGTATGTCTGTTCTG+GGG | - | chr7_2:47945777-47945796 | Msa1060230:intron | 40.0% | |
| !!! | TCTGTTCTGGGGTAACTTTT+TGG | - | chr7_2:47945788-47945807 | Msa1060230:intron | 40.0% |
| GGATGGAGATGAACATTGTT+AGG | - | chr7_2:47945915-47945934 | Msa1060230:intron | 40.0% | |
| CAGAAGGAAAGGAGGTAAAA+AGG | + | chr7_2:47946378-47946397 | None:intergenic | 40.0% | |
| !! | TTGTAGTATGCGTGTTGGTT+AGG | - | chr7_2:47946400-47946419 | Msa1060230:intron | 40.0% |
| !! | TGTAGTATGCGTGTTGGTTA+GGG | - | chr7_2:47946401-47946420 | Msa1060230:intron | 40.0% |
| TAGCTACAGTACCTTACACA+CGG | - | chr7_2:47946719-47946738 | Msa1060230:CDS | 40.0% | |
| TACCTTACACACGGTTCAAA+CGG | - | chr7_2:47946728-47946747 | Msa1060230:CDS | 40.0% | |
| AGAGCTACAAAAGAATGGCA+TGG | + | chr7_2:47946966-47946985 | None:intergenic | 40.0% | |
| GCTGAAGAGCTACAAAAGAA+TGG | + | chr7_2:47946971-47946990 | None:intergenic | 40.0% | |
| TAGGAGGGACAAAATGTGAT+CGG | + | chr7_2:47947393-47947412 | None:intergenic | 40.0% | |
| ATACTGTAATTGGCACGTGT+TGG | - | chr7_2:47947461-47947480 | Msa1060230:intron | 40.0% | |
| CACGTGTTGGAAACTATTTC+TGG | - | chr7_2:47947474-47947493 | Msa1060230:intron | 40.0% | |
| !! | TCTCTTTTGCTTGCTTTTCC+TGG | + | chr7_2:47947532-47947551 | None:intergenic | 40.0% |
| AGAGATTGTCTTGAAGGCAA+TGG | - | chr7_2:47947547-47947566 | Msa1060230:intron | 40.0% | |
| GAGATTGTCTTGAAGGCAAT+GGG | - | chr7_2:47947548-47947567 | Msa1060230:intron | 40.0% | |
| TACCTTCAGAATCTCTGCAA+TGG | + | chr7_2:47947597-47947616 | None:intergenic | 40.0% | |
| GACAGTCTAGCATATGTTTC+TGG | - | chr7_2:47947676-47947695 | Msa1060230:intron | 40.0% | |
| ! | TTGCAGTATCTTGGTGCAAA+GGG | + | chr7_2:47947886-47947905 | None:intergenic | 40.0% |
| ! | ATTGCAGTATCTTGGTGCAA+AGG | + | chr7_2:47947887-47947906 | None:intergenic | 40.0% |
| CAGTTAGCATAACAGATGTG+TGG | - | chr7_2:47947912-47947931 | Msa1060230:intron | 40.0% | |
| ATTGCAGTGTGGAAATGACT+CGG | - | chr7_2:47948048-47948067 | Msa1060230:intron | 40.0% | |
| TGACAAGGTGATTGAGATCA+TGG | + | chr7_2:47948081-47948100 | None:intergenic | 40.0% | |
| ATCTCAATCACCTTGTCAAC+TGG | - | chr7_2:47948083-47948102 | Msa1060230:intron | 40.0% | |
| GTTCAATTCTCCAGTTGACA+AGG | + | chr7_2:47948096-47948115 | None:intergenic | 40.0% | |
| TTATAACAGCTTCTTGGGGA+GGG | - | chr7_2:47948195-47948214 | Msa1060230:intron | 40.0% | |
| GGGGAGGGAAAAAAAATTGA+AGG | - | chr7_2:47948210-47948229 | Msa1060230:intron | 40.0% | |
| CTAGTCAAACAATCCAGGAA+TGG | + | chr7_2:47948249-47948268 | None:intergenic | 40.0% | |
| GCATTATAAGAATCCTGTGC+TGG | + | chr7_2:47948371-47948390 | None:intergenic | 40.0% | |
| GGTGGGTATGGAAATTATCA+AGG | - | chr7_2:47948555-47948574 | Msa1060230:intron | 40.0% | |
| GGGTATGGAAATTATCAAGG+TGG | - | chr7_2:47948558-47948577 | Msa1060230:intron | 40.0% | |
| AATACCCACCATTATCTGTC+AGG | + | chr7_2:47948711-47948730 | None:intergenic | 40.0% | |
| !! | AATGGTGGGTATTCTAATCG+CGG | - | chr7_2:47948718-47948737 | Msa1060230:intron | 40.0% |
| ! | TTTTCTGTCTTTCACCGAGA+TGG | - | chr7_2:47948842-47948861 | Msa1060230:intron | 40.0% |
| ! | ACAGATGAGAGCATAAACTC+AGG | + | chr7_2:47948871-47948890 | None:intergenic | 40.0% |
| !!! | CATTTTTAAGGTGGTTACGG+TGG | - | chr7_2:47949093-47949112 | Msa1060230:intron | 40.0% |
| ! | TATGGGTTATGAAAGAGGCA+GGG | - | chr7_2:47949431-47949450 | Msa1060230:intron | 40.0% |
| AAAACCAGGCATGATAGCAA+TGG | - | chr7_2:47949514-47949533 | Msa1060230:intron | 40.0% | |
| AAACCAGGCATGATAGCAAT+GGG | - | chr7_2:47949515-47949534 | Msa1060230:intron | 40.0% | |
| !! | TCATGAAACTGATTTGGGCA+AGG | - | chr7_2:47949651-47949670 | Msa1060230:CDS | 40.0% |
| !! | ATGGTGTTGGCAACCATAAA+AGG | + | chr7_2:47949744-47949763 | None:intergenic | 40.0% |
| GGAAGGGGAGAGAAATGAAT+TGG | + | chr7_2:47944988-47945007 | None:intergenic | 45.0% | |
| ! | TTCTCTCCCCTTCCTTTTCT+AGG | - | chr7_2:47944994-47945013 | Msa1060230:three_prime_UTR | 45.0% |
| ! | TCTCTCCCCTTCCTTTTCTA+GGG | - | chr7_2:47944995-47945014 | Msa1060230:three_prime_UTR | 45.0% |
| AGAGGTAGAGAGAGAGAAGA+GGG | + | chr7_2:47945061-47945080 | None:intergenic | 45.0% | |
| AAGAGGTAGAGAGAGAGAAG+AGG | + | chr7_2:47945062-47945081 | None:intergenic | 45.0% | |
| ACCTCTTTCTCTCTCTACCA+TGG | - | chr7_2:47945075-47945094 | Msa1060230:three_prime_UTR | 45.0% | |
| TCCATGGTAGAGAGAGAAAG+AGG | + | chr7_2:47945079-47945098 | None:intergenic | 45.0% | |
| TTTCTCTCTCTACCATGGAC+AGG | - | chr7_2:47945080-47945099 | Msa1060230:three_prime_UTR | 45.0% | |
| TACCATGGACAGGTATCAGA+AGG | - | chr7_2:47945090-47945109 | Msa1060230:three_prime_UTR | 45.0% | |
| AACCTTCTGATACCTGTCCA+TGG | + | chr7_2:47945095-47945114 | None:intergenic | 45.0% | |
| !! | GTTGATGGGAGTTTCAGGTT+TGG | + | chr7_2:47945125-47945144 | None:intergenic | 45.0% |
| GAGATCCGTATCACTACTCA+AGG | - | chr7_2:47945151-47945170 | Msa1060230:three_prime_UTR | 45.0% | |
| ATTGACCTGAAGAAGCGAAG+TGG | + | chr7_2:47945203-47945222 | None:intergenic | 45.0% | |
| CACGCTTTCATCAGAAGTTC+CGG | + | chr7_2:47945656-47945675 | None:intergenic | 45.0% | |
| GAAACACTGACACAGATACC+AGG | + | chr7_2:47945756-47945775 | None:intergenic | 45.0% | |
| CGTAAGTCGTATGTCTGTTC+TGG | - | chr7_2:47945775-47945794 | Msa1060230:intron | 45.0% | |
| ! | GGTAAAAAGGTACAAGGGTG+TGG | + | chr7_2:47946365-47946384 | None:intergenic | 45.0% |
| CTACAACACAGAAGGAAAGG+AGG | + | chr7_2:47946386-47946405 | None:intergenic | 45.0% | |
| CACGCATACTACAACACAGA+AGG | + | chr7_2:47946394-47946413 | None:intergenic | 45.0% | |
| CTGTGTTGTAGTATGCGTGT+TGG | - | chr7_2:47946395-47946414 | Msa1060230:intron | 45.0% | |
| TAACAGAGGCCCAGTACAAA+TGG | + | chr7_2:47946667-47946686 | None:intergenic | 45.0% | |
| AACCGTTTGAACCGTGTGTA+AGG | + | chr7_2:47946733-47946752 | None:intergenic | 45.0% | |
| GATTCTGTCATCTGACGATG+AGG | - | chr7_2:47946846-47946865 | Msa1060230:intron | 45.0% | |
| TGCCATTGCAGAGATTCTGA+AGG | - | chr7_2:47947592-47947611 | Msa1060230:intron | 45.0% | |
| ! | TGCAGTATCTTGGTGCAAAG+GGG | + | chr7_2:47947885-47947904 | None:intergenic | 45.0% |
| CTGAGCTGATTGCAGTATCT+TGG | + | chr7_2:47947895-47947914 | None:intergenic | 45.0% | |
| GGTACAAGACCCTCTTCAAT+GGG | + | chr7_2:47947941-47947960 | None:intergenic | 45.0% | |
| AATAGTTACGGAACTCACCC+AGG | + | chr7_2:47948128-47948147 | None:intergenic | 45.0% | |
| GTTATAACAGCTTCTTGGGG+AGG | - | chr7_2:47948194-47948213 | Msa1060230:intron | 45.0% | |
| TGCTGCTGATAATTGGAGTG+TGG | + | chr7_2:47948338-47948357 | None:intergenic | 45.0% | |
| CAGAGGTTGCTGCTGATAAT+TGG | + | chr7_2:47948345-47948364 | None:intergenic | 45.0% | |
| TAGAGGGAGAGGTAGGAATT+GGG | - | chr7_2:47948509-47948528 | Msa1060230:intron | 45.0% | |
| GTGGTTATGGCTATCAAGGT+GGG | - | chr7_2:47948538-47948557 | Msa1060230:intron | 45.0% | |
| TATGGCTATCAAGGTGGGTA+TGG | - | chr7_2:47948543-47948562 | Msa1060230:intron | 45.0% | |
| GCTTGGTTCCTGACAGATAA+TGG | - | chr7_2:47948700-47948719 | Msa1060230:intron | 45.0% | |
| ! | TGGTTCCTGACAGATAATGG+TGG | - | chr7_2:47948703-47948722 | Msa1060230:intron | 45.0% |
| ! | GGTTCCTGACAGATAATGGT+GGG | - | chr7_2:47948704-47948723 | Msa1060230:intron | 45.0% |
| !!! | TTTTAAGGTGGTTACGGTGG+CGG | - | chr7_2:47949096-47949115 | Msa1060230:intron | 45.0% |
| ! | GGAGGTATGGGTTATGAAAG+AGG | - | chr7_2:47949426-47949445 | Msa1060230:intron | 45.0% |
| ! | GTATGGGTTATGAAAGAGGC+AGG | - | chr7_2:47949430-47949449 | Msa1060230:intron | 45.0% |
| ! | ATGGGTTATGAAAGAGGCAG+GGG | - | chr7_2:47949432-47949451 | Msa1060230:intron | 45.0% |
| AGGTAGAGAGAGAGAAGAGG+GGG | + | chr7_2:47945059-47945078 | None:intergenic | 50.0% | |
| GAGGTAGAGAGAGAGAAGAG+GGG | + | chr7_2:47945060-47945079 | None:intergenic | 50.0% | |
| TGGCGCCTTGAGTAGTGATA+CGG | + | chr7_2:47945159-47945178 | None:intergenic | 50.0% | |
| TTACGCCACTTCGCTTCTTC+AGG | - | chr7_2:47945195-47945214 | Msa1060230:three_prime_UTR | 50.0% | |
| TGTTGCATGCTCTGTAGCAC+CGG | - | chr7_2:47945634-47945653 | Msa1060230:CDS | 50.0% | |
| CAACACTGACACGTCAACAC+CGG | + | chr7_2:47945729-47945748 | None:intergenic | 50.0% | |
| CGGTACAAGACCCTCTTCAA+TGG | + | chr7_2:47947942-47947961 | None:intergenic | 50.0% | |
| !! | GAATCCTGTGCTGGTTTCAG+AGG | + | chr7_2:47948362-47948381 | None:intergenic | 50.0% |
| TTTCTAGACTCGTATGGCCG+AGG | - | chr7_2:47948474-47948493 | Msa1060230:intron | 50.0% | |
| GTAGAGGGAGAGGTAGGAAT+TGG | - | chr7_2:47948508-47948527 | Msa1060230:intron | 50.0% | |
| AGAGGGAGAGGTAGGAATTG+GGG | - | chr7_2:47948510-47948529 | Msa1060230:intron | 50.0% | |
| GAGAGGTAGGAATTGGGGAA+GGG | - | chr7_2:47948515-47948534 | Msa1060230:intron | 50.0% | |
| AGAGGTAGGAATTGGGGAAG+GGG | - | chr7_2:47948516-47948535 | Msa1060230:intron | 50.0% | |
| AATTGGGGAAGGGGTGGTTA+TGG | - | chr7_2:47948525-47948544 | Msa1060230:intron | 50.0% | |
| AGGGGTGGTTATGGCTATCA+AGG | - | chr7_2:47948534-47948553 | Msa1060230:intron | 50.0% | |
| GGTGGTTATGGCTATCAAGG+TGG | - | chr7_2:47948537-47948556 | Msa1060230:intron | 50.0% | |
| GGTGGATACGGCTATTACCA+AGG | - | chr7_2:47948576-47948595 | Msa1060230:intron | 50.0% | |
| GGATACGGCTATTACCAAGG+TGG | - | chr7_2:47948579-47948598 | Msa1060230:intron | 50.0% | |
| AGAGGTGGAGGTTATGAAGG+TGG | - | chr7_2:47949120-47949139 | Msa1060230:intron | 50.0% | |
| GGAGGTTATGAAGGTGGTAG+AGG | - | chr7_2:47949126-47949145 | Msa1060230:intron | 50.0% | |
| GGTTATGAAGGTGGTAGAGG+TGG | - | chr7_2:47949129-47949148 | Msa1060230:intron | 50.0% | |
| TATGAAGGTGGTAGAGGTGG+AGG | - | chr7_2:47949132-47949151 | Msa1060230:intron | 50.0% | |
| AGAGGTGGAGGTGGTTATGA+AGG | - | chr7_2:47949144-47949163 | Msa1060230:intron | 50.0% | |
| TGGAGGTTATGAAGGTGGCA+GGG | - | chr7_2:47949197-47949216 | Msa1060230:intron | 50.0% | |
| ! | AGAGGTGGTGGTTATGAAGG+AGG | - | chr7_2:47949309-47949328 | Msa1060230:intron | 50.0% |
| AGAGGTGGAGGTTATGAAGG+AGG | - | chr7_2:47949120-47949139 | Msa1060230:intron | 50.0% | |
| !! | GGTGGAGGAATGGGTTATGT+AGG | - | chr7_2:47949360-47949379 | Msa1060230:intron | 50.0% |
| !! | GGAGGAATGGGTTATGTAGG+AGG | - | chr7_2:47949363-47949382 | Msa1060230:intron | 50.0% |
| ! | ATGGGTTATGTAGGAGGCAG+AGG | - | chr7_2:47949369-47949388 | Msa1060230:intron | 50.0% |
| CATCCATTCTTCCCCTACCA+CGG | + | chr7_2:47949473-47949492 | None:intergenic | 50.0% | |
| TGGTAGAGGTGGAGAAAACC+AGG | - | chr7_2:47949500-47949519 | Msa1060230:intron | 50.0% | |
| ACACCCATTGCTATCATGCC+TGG | + | chr7_2:47949521-47949540 | None:intergenic | 50.0% | |
| ACGTGTCAGTGTTGTGTGCC+TGG | - | chr7_2:47945735-47945754 | Msa1060230:intron | 55.0% | |
| CAGAGGCCCAGTACAAATGG+AGG | + | chr7_2:47946664-47946683 | None:intergenic | 55.0% | |
| TGTGTGGGAGCCCATTGAAG+AGG | - | chr7_2:47947928-47947947 | Msa1060230:intron | 55.0% | |
| GTGTGGGAGCCCATTGAAGA+GGG | - | chr7_2:47947929-47947948 | Msa1060230:intron | 55.0% | |
| !! | GCAACCTCTGAAACCAGCAC+AGG | - | chr7_2:47948355-47948374 | Msa1060230:intron | 55.0% |
| GGAGAGGTAGGAATTGGGGA+AGG | - | chr7_2:47948514-47948533 | Msa1060230:intron | 55.0% | |
| GGTATTCTAATCGCGGCCGA+GGG | - | chr7_2:47948725-47948744 | Msa1060230:intron | 55.0% | |
| GTATTCTAATCGCGGCCGAG+GGG | - | chr7_2:47948726-47948745 | Msa1060230:intron | 55.0% | |
| TATTCTAATCGCGGCCGAGG+GGG | - | chr7_2:47948727-47948746 | Msa1060230:intron | 55.0% | |
| GGCAGAGGTGGAGGTTATGA+AGG | - | chr7_2:47949117-47949136 | Msa1060230:intron | 55.0% | |
| GGTGGAGGTGGTTATGAAGG+TGG | - | chr7_2:47949147-47949166 | Msa1060230:intron | 55.0% | |
| GGTGGTTATGAAGGTGGCAG+AGG | - | chr7_2:47949153-47949172 | Msa1060230:intron | 55.0% | |
| GGTTATGAAGGTGGCAGAGG+TGG | - | chr7_2:47949156-47949175 | Msa1060230:intron | 55.0% | |
| TATGAAGGTGGTCGTGGTGG+AGG | - | chr7_2:47949180-47949199 | Msa1060230:intron | 55.0% | |
| ! | GGTCGTGGTGGAGGTTATGA+AGG | - | chr7_2:47949189-47949208 | Msa1060230:intron | 55.0% |
| ! | CGTGGTGGAGGTTATGAAGG+TGG | - | chr7_2:47949192-47949211 | Msa1060230:intron | 55.0% |
| GTGGAGGTTATGAAGGTGGC+AGG | - | chr7_2:47949196-47949215 | Msa1060230:intron | 55.0% | |
| GGAGGTTATGAAGGTGGCAG+GGG | - | chr7_2:47949198-47949217 | Msa1060230:intron | 55.0% | |
| GTTATGGAGGCAGAGGTGGA+GGG | - | chr7_2:47949226-47949245 | Msa1060230:intron | 55.0% | |
| AGAGGTGGAGGATATGGAGG+AGG | - | chr7_2:47949285-47949304 | Msa1060230:intron | 55.0% | |
| ! | GGCAGAGGTGGTGGTTATGA+AGG | - | chr7_2:47949306-47949325 | Msa1060230:intron | 55.0% |
| GGTGGTTATGAAGGAGGCAG+AGG | - | chr7_2:47949315-47949334 | Msa1060230:intron | 55.0% | |
| GGTTATGAAGGAGGCAGAGG+TGG | - | chr7_2:47949318-47949337 | Msa1060230:intron | 55.0% | |
| TATGAAGGAGGCAGAGGTGG+AGG | - | chr7_2:47949321-47949340 | Msa1060230:intron | 55.0% | |
| GGCAGAGGTGGAGGTTATGA+AGG | - | chr7_2:47949117-47949136 | Msa1060230:intron | 55.0% | |
| GGAGGTTATGAAGGAGGCAG+AGG | - | chr7_2:47949339-47949358 | Msa1060230:intron | 55.0% | |
| GGTTATGAAGGAGGCAGAGG+TGG | - | chr7_2:47949318-47949337 | Msa1060230:intron | 55.0% | |
| TATGAAGGAGGCAGAGGTGG+AGG | - | chr7_2:47949321-47949340 | Msa1060230:intron | 55.0% | |
| GGTTATGTAGGAGGCAGAGG+TGG | - | chr7_2:47949372-47949391 | Msa1060230:intron | 55.0% | |
| TATGTAGGAGGCAGAGGTGG+AGG | - | chr7_2:47949375-47949394 | Msa1060230:intron | 55.0% | |
| ! | GGAGGTGGTATGGGTTACGA+AGG | - | chr7_2:47949393-47949412 | Msa1060230:intron | 55.0% |
| ! | GGTGGTATGGGTTACGAAGG+AGG | - | chr7_2:47949396-47949415 | Msa1060230:intron | 55.0% |
| ! | ATGGGTTACGAAGGAGGCAG+AGG | - | chr7_2:47949402-47949421 | Msa1060230:intron | 55.0% |
| GGTTATGAAAGAGGCAGGGG+AGG | - | chr7_2:47949435-47949454 | Msa1060230:intron | 55.0% | |
| CGTGGTAGGGGAAGAATGGA+TGG | - | chr7_2:47949471-47949490 | Msa1060230:intron | 55.0% | |
| AGGGGAAGAATGGATGGACG+TGG | - | chr7_2:47949477-47949496 | Msa1060230:intron | 55.0% | |
| GGAAGAATGGATGGACGTGG+TGG | - | chr7_2:47949480-47949499 | Msa1060230:intron | 55.0% | |
| ATGGATGGACGTGGTGGTAG+AGG | - | chr7_2:47949486-47949505 | Msa1060230:intron | 55.0% | |
| CTCTACCTCGACCACGACCT+CGG | + | chr7_2:47948494-47948513 | None:intergenic | 60.0% | |
| GAGGTCGTGGTCGAGGTAGA+GGG | - | chr7_2:47948493-47948512 | Msa1060230:intron | 60.0% | |
| GTCGAGGTAGAGGGAGAGGT+AGG | - | chr7_2:47948502-47948521 | Msa1060230:intron | 60.0% | |
| GGTAGGAATTGGGGAAGGGG+TGG | - | chr7_2:47948519-47948538 | Msa1060230:intron | 60.0% | |
| GGGTATTCTAATCGCGGCCG+AGG | - | chr7_2:47948724-47948743 | Msa1060230:intron | 60.0% | |
| GAAGGTGGTAGAGGTGGAGG+TGG | - | chr7_2:47949135-47949154 | Msa1060230:intron | 60.0% | |
| GGTGGCAGAGGTGGCTATGA+AGG | - | chr7_2:47949165-47949184 | Msa1060230:intron | 60.0% | |
| GGCAGAGGTGGCTATGAAGG+TGG | - | chr7_2:47949168-47949187 | Msa1060230:intron | 60.0% | |
| GGTGGCTATGAAGGTGGTCG+TGG | - | chr7_2:47949174-47949193 | Msa1060230:intron | 60.0% | |
| GGCTATGAAGGTGGTCGTGG+TGG | - | chr7_2:47949177-47949196 | Msa1060230:intron | 60.0% | |
| GGTTATGAAGGTGGCAGGGG+TGG | - | chr7_2:47949201-47949220 | Msa1060230:intron | 60.0% | |
| TATGAAGGTGGCAGGGGTGG+AGG | - | chr7_2:47949204-47949223 | Msa1060230:intron | 60.0% | |
| GGTGGAGGTTATGGAGGCAG+AGG | - | chr7_2:47949219-47949238 | Msa1060230:intron | 60.0% | |
| GGAGGTTATGGAGGCAGAGG+TGG | - | chr7_2:47949222-47949241 | Msa1060230:intron | 60.0% | |
| GGTTATGGAGGCAGAGGTGG+AGG | - | chr7_2:47949225-47949244 | Msa1060230:intron | 60.0% | |
| ! | AGAGGTGGAGGGTACGAAGG+AGG | - | chr7_2:47949237-47949256 | Msa1060230:intron | 60.0% |
| TACGAAGGAGGCAGAGGTGG+AGG | - | chr7_2:47949249-47949268 | Msa1060230:intron | 60.0% | |
| ACGAAGGAGGCAGAGGTGGA+GGG | - | chr7_2:47949250-47949269 | Msa1060230:intron | 60.0% | |
| ! | AGAGGTGGAGGGTATGGTGG+AGG | - | chr7_2:47949261-47949280 | Msa1060230:intron | 60.0% |
| ! | TATGGTGGAGGCAGAGGTGG+AGG | - | chr7_2:47949273-47949292 | Msa1060230:intron | 60.0% |
| GGAGGCAGAGGTGGAGGATA+TGG | - | chr7_2:47949279-47949298 | Msa1060230:intron | 60.0% | |
| GGCAGAGGTGGAGGATATGG+AGG | - | chr7_2:47949282-47949301 | Msa1060230:intron | 60.0% | |
| GGAGGATATGGAGGAGGCAG+AGG | - | chr7_2:47949291-47949310 | Msa1060230:intron | 60.0% | |
| GGATATGGAGGAGGCAGAGG+TGG | - | chr7_2:47949294-47949313 | Msa1060230:intron | 60.0% | |
| TATGGAGGAGGCAGAGGTGG+TGG | - | chr7_2:47949297-47949316 | Msa1060230:intron | 60.0% | |
| AGGAGGCAGAGGTGGAGGAA+TGG | - | chr7_2:47949350-47949369 | Msa1060230:intron | 60.0% | |
| GGAGGCAGAGGTGGAGGAAT+GGG | - | chr7_2:47949351-47949370 | Msa1060230:intron | 60.0% | |
| AGGCAGAGGTGGAGGTGGTA+TGG | - | chr7_2:47949383-47949402 | Msa1060230:intron | 60.0% | |
| GGCAGAGGTGGAGGTGGTAT+GGG | - | chr7_2:47949384-47949403 | Msa1060230:intron | 60.0% | |
| GGTTACGAAGGAGGCAGAGG+TGG | - | chr7_2:47949405-47949424 | Msa1060230:intron | 60.0% | |
| TACGAAGGAGGCAGAGGTGG+AGG | - | chr7_2:47949249-47949268 | Msa1060230:intron | 60.0% | |
| AGGAGGCAGAGGTGGAGGTA+TGG | - | chr7_2:47949413-47949432 | Msa1060230:intron | 60.0% | |
| ! | GGAGGCAGAGGTGGAGGTAT+GGG | - | chr7_2:47949414-47949433 | Msa1060230:intron | 60.0% |
| ATGAAAGAGGCAGGGGAGGC+AGG | - | chr7_2:47949439-47949458 | Msa1060230:intron | 60.0% | |
| TGAAAGAGGCAGGGGAGGCA+GGG | - | chr7_2:47949440-47949459 | Msa1060230:intron | 60.0% | |
| CAGGGGATATGGCCGTGGTA+GGG | - | chr7_2:47949458-47949477 | Msa1060230:intron | 60.0% | |
| AGGGGATATGGCCGTGGTAG+GGG | - | chr7_2:47949459-47949478 | Msa1060230:intron | 60.0% | |
| TGGCCGTGGTAGGGGAAGAA+TGG | - | chr7_2:47949467-47949486 | Msa1060230:intron | 60.0% | |
| GATGGACGTGGTGGTAGAGG+TGG | - | chr7_2:47949489-47949508 | Msa1060230:intron | 60.0% | |
| GACTCGTATGGCCGAGGTCG+TGG | - | chr7_2:47948480-47948499 | Msa1060230:intron | 65.0% | |
| TATGGCCGAGGTCGTGGTCG+AGG | - | chr7_2:47948486-47948505 | Msa1060230:intron | 65.0% | |
| CGAGGTCGTGGTCGAGGTAG+AGG | - | chr7_2:47948492-47948511 | Msa1060230:intron | 65.0% | |
| CGTGGTCGAGGTAGAGGGAG+AGG | - | chr7_2:47948498-47948517 | Msa1060230:intron | 65.0% | |
| GGGAGGTCGAGGCAGAGGTT+GGG | - | chr7_2:47948747-47948766 | Msa1060230:intron | 65.0% | |
| GGAGGTCGAGGCAGAGGTTG+GGG | - | chr7_2:47948748-47948767 | Msa1060230:intron | 65.0% | |
| GAGGTCGAGGCAGAGGTTGG+GGG | - | chr7_2:47948749-47948768 | Msa1060230:intron | 65.0% | |
| !! | GGCAGAGGTTGGGGGTATCG+TGG | - | chr7_2:47948757-47948776 | Msa1060230:intron | 65.0% |
| GGTGGCAGGGGTGGAGGTTA+TGG | - | chr7_2:47949210-47949229 | Msa1060230:intron | 65.0% | |
| GGCAGGGGTGGAGGTTATGG+AGG | - | chr7_2:47949213-47949232 | Msa1060230:intron | 65.0% | |
| ! | GGCAGAGGTGGAGGGTACGA+AGG | - | chr7_2:47949234-47949253 | Msa1060230:intron | 65.0% |
| ! | GGAGGGTACGAAGGAGGCAG+AGG | - | chr7_2:47949243-47949262 | Msa1060230:intron | 65.0% |
| GGGTACGAAGGAGGCAGAGG+TGG | - | chr7_2:47949246-47949265 | Msa1060230:intron | 65.0% | |
| GGAGGCAGAGGTGGAGGGTA+TGG | - | chr7_2:47949231-47949250 | Msa1060230:intron | 65.0% | |
| ! | GGCAGAGGTGGAGGGTATGG+TGG | - | chr7_2:47949258-47949277 | Msa1060230:intron | 65.0% |
| ! | GGAGGGTATGGTGGAGGCAG+AGG | - | chr7_2:47949267-47949286 | Msa1060230:intron | 65.0% |
| ! | GGGTATGGTGGAGGCAGAGG+TGG | - | chr7_2:47949270-47949289 | Msa1060230:intron | 65.0% |
| GTAGGAGGCAGAGGTGGAGG+TGG | - | chr7_2:47949378-47949397 | Msa1060230:intron | 65.0% | |
| GAAAGAGGCAGGGGAGGCAG+GGG | - | chr7_2:47949441-47949460 | Msa1060230:intron | 65.0% | |
| GCAGGGGATATGGCCGTGGT+AGG | - | chr7_2:47949457-47949476 | Msa1060230:intron | 65.0% | |
| TCTAATCGCGGCCGAGGGGG+AGG | - | chr7_2:47948730-47948749 | Msa1060230:intron | 70.0% | |
| CTCTGCCTCGACCTCCCCCT+CGG | + | chr7_2:47948744-47948763 | None:intergenic | 70.0% | |
| GGGGAGGTCGAGGCAGAGGT+TGG | - | chr7_2:47948746-47948765 | Msa1060230:intron | 70.0% | |
| ! | GGTGGTTACGGTGGCGGCAG+AGG | - | chr7_2:47949102-47949121 | Msa1060230:intron | 70.0% |
| ! | GGTTACGGTGGCGGCAGAGG+TGG | - | chr7_2:47949105-47949124 | Msa1060230:intron | 70.0% |
| ! | TACGGTGGCGGCAGAGGTGG+AGG | - | chr7_2:47949108-47949127 | Msa1060230:intron | 70.0% |
| GGCAGGGGAGGCAGGGGATA+TGG | - | chr7_2:47949447-47949466 | Msa1060230:intron | 70.0% | |
| GGAGGCAGGGGATATGGCCG+TGG | - | chr7_2:47949453-47949472 | Msa1060230:intron | 70.0% | |
| CGAGGGGGAGGTCGAGGCAG+AGG | - | chr7_2:47948742-47948761 | Msa1060230:intron | 75.0% | |
| ! | CGCGGCCGAGGGGGAGGTCG+AGG | - | chr7_2:47948736-47948755 | Msa1060230:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 47944913 | 47949904 | 47944913 | ID=Msa1060230;Name=Msa1060230 |
| chr7_2 | mRNA | 47944913 | 47949904 | 47944913 | ID=Msa1060230-mRNA-1;Parent=Msa1060230;Name=Msa1060230-mRNA-1;_AED=0.07;_eAED=0.07;_QI=181|1|1|1|1|1|8|377|364 |
| chr7_2 | exon | 47944913 | 47945714 | 47944913 | ID=Msa1060230-mRNA-1:exon:8659;Parent=Msa1060230-mRNA-1 |
| chr7_2 | exon | 47946039 | 47946101 | 47946039 | ID=Msa1060230-mRNA-1:exon:8658;Parent=Msa1060230-mRNA-1 |
| chr7_2 | exon | 47946199 | 47946336 | 47946199 | ID=Msa1060230-mRNA-1:exon:8657;Parent=Msa1060230-mRNA-1 |
| chr7_2 | exon | 47946416 | 47946516 | 47946416 | ID=Msa1060230-mRNA-1:exon:8656;Parent=Msa1060230-mRNA-1 |
| chr7_2 | exon | 47946688 | 47946762 | 47946688 | ID=Msa1060230-mRNA-1:exon:8655;Parent=Msa1060230-mRNA-1 |
| chr7_2 | exon | 47946857 | 47946945 | 47946857 | ID=Msa1060230-mRNA-1:exon:8654;Parent=Msa1060230-mRNA-1 |
| chr7_2 | exon | 47947204 | 47947284 | 47947204 | ID=Msa1060230-mRNA-1:exon:8653;Parent=Msa1060230-mRNA-1 |
| chr7_2 | exon | 47949601 | 47949904 | 47949601 | ID=Msa1060230-mRNA-1:exon:8652;Parent=Msa1060230-mRNA-1 |
| chr7_2 | five_prime_UTR | 47949724 | 47949904 | 47949724 | ID=Msa1060230-mRNA-1:five_prime_utr;Parent=Msa1060230-mRNA-1 |
| chr7_2 | CDS | 47949601 | 47949723 | 47949601 | ID=Msa1060230-mRNA-1:cds;Parent=Msa1060230-mRNA-1 |
| chr7_2 | CDS | 47947204 | 47947284 | 47947204 | ID=Msa1060230-mRNA-1:cds;Parent=Msa1060230-mRNA-1 |
| chr7_2 | CDS | 47946857 | 47946945 | 47946857 | ID=Msa1060230-mRNA-1:cds;Parent=Msa1060230-mRNA-1 |
| chr7_2 | CDS | 47946688 | 47946762 | 47946688 | ID=Msa1060230-mRNA-1:cds;Parent=Msa1060230-mRNA-1 |
| chr7_2 | CDS | 47946416 | 47946516 | 47946416 | ID=Msa1060230-mRNA-1:cds;Parent=Msa1060230-mRNA-1 |
| chr7_2 | CDS | 47946199 | 47946336 | 47946199 | ID=Msa1060230-mRNA-1:cds;Parent=Msa1060230-mRNA-1 |
| chr7_2 | CDS | 47946039 | 47946101 | 47946039 | ID=Msa1060230-mRNA-1:cds;Parent=Msa1060230-mRNA-1 |
| chr7_2 | CDS | 47945290 | 47945714 | 47945290 | ID=Msa1060230-mRNA-1:cds;Parent=Msa1060230-mRNA-1 |
| chr7_2 | three_prime_UTR | 47944913 | 47945289 | 47944913 | ID=Msa1060230-mRNA-1:three_prime_utr;Parent=Msa1060230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
