AlfalfaGEDB | Msa0841860

M. sativa cultivar zhongmu-4 / Msa0841860

KEGG: -
GO: GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008300 GO:0009056 GO:0009685 GO:0009889 GO:0009987 GO:0010371 GO:0010468 GO:0010556 GO:0010565 GO:0010817 GO:0016042 GO:0016054 GO:0016101 GO:0016103 GO:0016115 GO:0019216 GO:0019219 GO:0019222 GO:0019747 GO:0019752 GO:0031323 GO:0031326 GO:0032350 GO:0042445 GO:0042447 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044464 GO:0045487 GO:0046395 GO:0046885 GO:0046890 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0140110 GO:1901575 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0841860	XP_003612938.1	97.846	325	5	1	1	323	1	325	0.0	646

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0841860	sp\|Q9LSL1\|BH093_ARATH	68.657	201	57	2	129	323	151	351	1.41e-83	259

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0841860	A9YWR2	97.846	325	5	1	1	323	1	325	0.0	646

TFs/TRs:

Gene ID	Type	Classification
Msa0841860	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0033220	Msa0841860	0.800124	1.669640e-48	-8.615850e-47
Msa0720740	Msa0841860	0.857009	2.185016e-62	-8.615850e-47
Msa0761310	Msa0841860	0.841668	4.131486e-58	-8.615850e-47
Msa0803780	Msa0841860	0.886169	4.321545e-72	-8.615850e-47
Msa0841860	Msa1147650	0.804324	2.281344e-49	-8.615850e-47
Msa0841860	Msa1205490	0.819209	1.309611e-52	-8.615850e-47
Msa0841860	Msa1205890	0.828874	7.054913e-55	-8.615850e-47
Msa0841860	Msa1277260	0.828367	9.351977e-55	-8.615850e-47
Msa0841860	Msa1297640	0.814237	1.706415e-51	-8.615850e-47
Msa0841860	Msa1297690	0.827262	1.724156e-54	-8.615850e-47
Msa0841860	Msa1315890	0.810787	9.687710e-51	-8.615850e-47
Msa0140770	Msa0841860	-0.817332	3.483345e-52	-8.615850e-47
Msa0402070	Msa0841860	-0.801364	9.325684e-49	-8.615850e-47
Msa0423550	Msa0841860	0.807803	4.229373e-50	-8.615850e-47
Msa0465500	Msa0841860	0.812805	3.523304e-51	-8.615850e-47
Msa0479760	Msa0841860	-0.824983	6.003903e-54	-8.615850e-47
Msa0511440	Msa0841860	0.816267	6.040172e-52	-8.615850e-47
Msa0590320	Msa0841860	0.840900	6.581173e-58	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0841860	MtrunA17_Chr5g0411541	97.846	325	5	1	1	323	1	325	0.0	646
Msa0841860	MtrunA17_Chr3g0141091	52.161	347	132	15	1	323	1	337	3.97e-90	272
Msa0841860	MtrunA17_Chr3g0131691	46.798	203	79	7	140	320	287	482	4.62e-41	149
Msa0841860	MtrunA17_Chr7g0252041	45.312	192	80	4	152	320	284	473	6.88e-41	148
Msa0841860	MtrunA17_Chr1g0211081	28.505	214	105	5	142	313	305	512	1.39e-19	89.4
Msa0841860	MtrunA17_Chr5g0400671	26.630	184	125	3	140	313	140	323	3.62e-15	75.1
Msa0841860	MtrunA17_Chr8g0365711	27.513	189	121	3	140	314	230	416	8.47e-15	74.7
Msa0841860	MtrunA17_Chr1g0185621	31.527	203	108	7	138	312	454	653	1.05e-14	74.7
Msa0841860	MtrunA17_Chr8g0346161	30.508	177	103	6	152	316	289	457	2.73e-14	73.2
Msa0841860	MtrunA17_Chr2g0298751	33.544	158	83	4	150	285	48	205	3.92e-14	70.9
Msa0841860	MtrunA17_Chr2g0320291	30.682	176	103	5	147	309	126	295	4.18e-14	72.0
Msa0841860	MtrunA17_Chr4g0049331	23.891	293	184	10	32	312	37	302	6.01e-14	71.2
Msa0841860	MtrunA17_Chr2g0280161	28.571	161	99	4	145	289	162	322	7.95e-14	71.2
Msa0841860	MtrunA17_Chr4g0028071	53.448	58	27	0	153	210	148	205	1.63e-13	70.5
Msa0841860	MtrunA17_Chr2g0333611	26.984	189	117	5	143	314	32	216	1.75e-13	68.6
Msa0841860	MtrunA17_Chr5g0411341	28.221	163	97	2	151	293	490	652	2.10e-13	70.9
Msa0841860	MtrunA17_Chr5g0400621	30.464	151	96	2	145	286	148	298	7.17e-13	68.6
Msa0841860	MtrunA17_Chr8g0346151	30.872	149	86	4	152	285	277	423	7.54e-13	68.9
Msa0841860	MtrunA17_Chr7g0260841	35.789	95	59	1	151	243	352	446	1.38e-12	68.2
Msa0841860	MtrunA17_Chr7g0275821	28.261	138	96	2	151	286	249	385	1.52e-12	67.8
Msa0841860	MtrunA17_Chr8g0366751	29.375	160	93	4	151	290	459	618	3.21e-12	67.4
Msa0841860	MtrunA17_Chr4g0033291	32.500	160	92	4	141	289	142	296	2.85e-11	63.5
Msa0841860	MtrunA17_Chr6g0468461	41.860	86	44	3	131	212	148	231	5.70e-11	62.8
Msa0841860	MtrunA17_Chr4g0033281	43.478	69	39	0	141	209	140	208	7.22e-11	62.4
Msa0841860	MtrunA17_Chr3g0113721	28.736	174	104	6	147	312	35	196	9.32e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0841860	AT5G65640.1	68.657	201	57	2	129	323	151	351	1.43e-84	259
Msa0841860	AT5G10570.1	48.235	340	121	11	11	323	4	315	2.21e-77	239
Msa0841860	AT1G12860.1	46.739	184	83	3	152	320	265	448	2.24e-41	149
Msa0841860	AT3G26744.1	45.745	188	83	2	152	320	305	492	2.45e-40	147
Msa0841860	AT3G26744.4	45.745	188	83	2	152	320	305	492	2.45e-40	147
Msa0841860	AT3G26744.2	45.745	188	83	2	152	320	305	492	2.45e-40	147
Msa0841860	AT1G12860.2	48.750	160	67	3	152	296	265	424	3.56e-37	138
Msa0841860	AT3G26744.6	47.561	164	67	2	152	296	305	468	2.31e-36	136
Msa0841860	AT5G65640.2	67.227	119	32	3	133	245	155	272	7.44e-36	131
Msa0841860	AT2G16910.1	33.663	202	97	7	153	319	313	512	4.49e-21	94.4
Msa0841860	AT4G09820.1	30.058	173	106	4	143	314	352	510	2.53e-17	82.8
Msa0841860	AT4G29930.6	35.036	137	83	2	153	284	53	188	9.72e-16	75.5
Msa0841860	AT4G29930.2	36.232	138	77	4	153	284	53	185	3.20e-15	73.9
Msa0841860	AT5G46760.1	31.319	182	106	5	151	317	412	589	3.21e-15	76.6
Msa0841860	AT4G29930.5	35.036	137	80	3	153	284	53	185	4.50e-15	73.9
Msa0841860	AT4G29930.4	51.667	60	29	0	153	212	53	112	2.71e-14	70.5
Msa0841860	AT4G17880.1	29.814	161	98	3	151	299	413	570	3.61e-14	73.6
Msa0841860	AT4G29930.1	51.667	60	29	0	153	212	53	112	6.80e-14	70.9
Msa0841860	AT4G29930.3	51.667	60	29	0	153	212	53	112	8.54e-14	70.9
Msa0841860	AT4G29930.7	51.667	60	29	0	153	212	53	112	8.54e-14	70.9
Msa0841860	AT2G46510.1	37.143	105	57	3	151	255	392	487	8.72e-14	72.4
Msa0841860	AT4G37850.2	29.064	203	124	6	100	284	93	293	1.76e-13	70.5
Msa0841860	AT4G37850.1	29.064	203	124	6	100	284	93	293	1.76e-13	70.5
Msa0841860	AT2G28160.1	44.444	72	35	1	139	210	121	187	1.22e-12	68.2
Msa0841860	AT2G28160.2	44.444	72	35	1	139	210	121	187	1.38e-12	67.8
Msa0841860	AT1G10610.2	42.308	78	43	1	149	226	229	304	7.19e-12	66.2
Msa0841860	AT1G10610.3	42.308	78	43	1	149	226	162	237	8.43e-12	65.9
Msa0841860	AT1G10610.1	42.308	78	43	1	149	226	259	334	9.42e-12	65.9
Msa0841860	AT2G22760.2	28.105	153	94	4	155	293	120	270	1.15e-11	64.7
Msa0841860	AT5G57150.1	28.221	163	99	1	153	297	53	215	1.21e-11	64.3
Msa0841860	AT5G57150.2	28.395	162	98	1	153	296	54	215	1.42e-11	63.5
Msa0841860	AT5G57150.5	29.139	151	89	1	153	285	53	203	1.54e-11	63.5
Msa0841860	AT2G22760.1	28.105	153	94	4	155	293	120	270	1.87e-11	64.3
Msa0841860	AT5G57150.3	29.139	151	89	1	153	285	54	204	1.99e-11	63.2
Msa0841860	AT4G16430.1	36.905	84	50	1	155	235	321	404	2.22e-11	65.1
Msa0841860	AT5G57150.4	29.139	151	89	2	153	285	54	204	3.80e-11	63.2
Msa0841860	AT1G63650.3	30.435	161	80	5	155	286	406	563	4.49e-11	64.3
Msa0841860	AT1G63650.1	30.435	161	80	5	155	286	406	563	4.49e-11	64.3
Msa0841860	AT1G63650.2	30.435	161	80	5	155	286	406	563	4.49e-11	64.3
Msa0841860	AT1G32640.1	45.763	59	32	0	151	209	449	507	5.91e-11	63.9

Find 89 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAACCAAAGCTAACTTATT+TGG	0.145838	5_4:+18634925	None:intergenic
TTTAAAGCATATGCATATTC+AGG	0.220131	5_4:+18634738	None:intergenic
TGAATCACCTTGCTGATCTT+AGG	0.222682	5_4:+18636308	None:intergenic
AGGCTGTCCTTCAACCCTTT+TGG	0.223211	5_4:+18636406	None:intergenic
AGTGATTGCTTTATCTCTTC+AGG	0.235636	5_4:+18635098	None:intergenic
TGGAATGAAGTTGAACAAAA+TGG	0.249862	5_4:+18636935	None:intergenic
ACTCCTTAGAAATTTCTAAA+AGG	0.276635	5_4:+18635845	None:intergenic
CATAGATTTGAATGTCCTTA+TGG	0.286074	5_4:-18636650	Msa0841860:CDS
TTATCAATGTACTACTAAAA+AGG	0.286143	5_4:+18634813	None:intergenic
TTTACCACAACAAGAAAGTA+TGG	0.308343	5_4:-18636558	Msa0841860:CDS
TTCCCATGTGTTTAGGTAGA+TGG	0.318517	5_4:-18635140	Msa0841860:intron
TCATCATACCCTTATCTTGA+TGG	0.320494	5_4:-18636617	Msa0841860:CDS
CTTTCTTGTTGTGGTAAAAC+TGG	0.323789	5_4:+18636563	None:intergenic
AGATAAAGCAATCACTATTC+AGG	0.330105	5_4:-18635091	Msa0841860:CDS
TTTCTTACCATTACTTCATT+TGG	0.330225	5_4:+18635817	None:intergenic
CAAGAAAGTATGGAAGAGTT+TGG	0.335442	5_4:-18636548	Msa0841860:CDS
GAGTCAAAGGTCCAACCATT+AGG	0.336189	5_4:+18636743	None:intergenic
ATGGAAGAGTTTGGATTTGT+TGG	0.361028	5_4:-18636539	Msa0841860:CDS
CATTCAAATCTATGGTCTAA+TGG	0.372381	5_4:+18636659	None:intergenic
TAGTAAGTTACAAGAAGAAA+TGG	0.377782	5_4:-18635893	Msa0841860:CDS
ATTGTTAAGACTTATCTGTT+TGG	0.378758	5_4:-18636913	Msa0841860:five_prime_UTR
AATGGGAGGAGTTTCAAGTT+TGG	0.387752	5_4:+18636953	None:intergenic
CAGTAACAATCCTGGCTTTG+TGG	0.397442	5_4:+18635642	None:intergenic
GAATCACCTTGCTGATCTTA+GGG	0.398992	5_4:+18636309	None:intergenic
CCCTAGTGTATGTTAAATAC+AGG	0.405026	5_4:+18634879	None:intergenic
AATGAGTTACTACTCCCTAA+TGG	0.409168	5_4:-18636758	Msa0841860:CDS
CATAAGGACATTCAAATCTA+TGG	0.410090	5_4:+18636651	None:intergenic
TCTTCAATATCAATAATTCA+AGG	0.410190	5_4:-18634978	Msa0841860:three_prime_UTR
ACAGCCTTCAAAGAATCTTA+TGG	0.411193	5_4:-18636390	Msa0841860:CDS
ATGGACAGGACATCAATTCT+AGG	0.415879	5_4:-18635955	Msa0841860:CDS
ATCTGCTGTGCCACAAAGCC+AGG	0.421676	5_4:-18635652	Msa0841860:CDS
GCAAATGAAGGGTTTAAAGA+TGG	0.426120	5_4:+18636695	None:intergenic
CTATTCAGGAATGCAGGTTA+TGG	0.429722	5_4:-18635077	Msa0841860:CDS
GTGATTGCTTTATCTCTTCA+GGG	0.432133	5_4:+18635099	None:intergenic
GAAGAAAGCGTTTGAATGAC+AGG	0.437266	5_4:-18636355	Msa0841860:CDS
GATTCCAAATAAGTTAGCTT+TGG	0.441100	5_4:-18634929	Msa0841860:three_prime_UTR
GGAATGAAGTTGAACAAAAT+GGG	0.446885	5_4:+18636936	None:intergenic
TCAGCCATAAGATTCTTTGA+AGG	0.448137	5_4:+18636386	None:intergenic
AGTCAAAGGTCCAACCATTA+GGG	0.456761	5_4:+18636744	None:intergenic
AAAATGGAACTTTCTCAACT+TGG	0.469304	5_4:-18636842	Msa0841860:CDS
TATTCATAGTTCACAAAAGT+GGG	0.479190	5_4:-18636877	Msa0841860:five_prime_UTR
ATGACAGGCTTTCCATGCTT+AGG	0.479470	5_4:-18636340	Msa0841860:CDS
GCCAAATCCAAAAGGGTTGA+AGG	0.482278	5_4:-18636413	Msa0841860:CDS
CCCTGTATTTAACATACACT+AGG	0.484133	5_4:-18634880	Msa0841860:three_prime_UTR
ACTGAGAATCCATCAAGATA+AGG	0.498561	5_4:+18636608	None:intergenic
CTGAGAATCCATCAAGATAA+GGG	0.499837	5_4:+18636609	None:intergenic
CTAGGAAAATGATGGAAAGC+TGG	0.502768	5_4:-18635042	Msa0841860:exon
TAAGTTACAAGAAGAAATGG+AGG	0.505778	5_4:-18635890	Msa0841860:CDS
ACATGAAAGAGCTTCTAGAA+AGG	0.506584	5_4:-18635918	Msa0841860:CDS
TTGAATTATTGATATTGAAG+AGG	0.507132	5_4:+18634980	None:intergenic
AGATACTGATTCTTGTGTCC+TGG	0.512516	5_4:+18635671	None:intergenic
TCTTCCATACTTTCTTGTTG+TGG	0.521400	5_4:+18636554	None:intergenic
ACATGGAATACTTTATCCAC+TGG	0.522465	5_4:-18636785	Msa0841860:CDS
CAATCACTATTCAGGAATGC+AGG	0.523750	5_4:-18635083	Msa0841860:CDS
TGATGTTGAGAGGAGAGACC+AGG	0.532244	5_4:-18635689	Msa0841860:CDS
TTCAGGAATGCAGGTTATGG+TGG	0.533157	5_4:-18635074	Msa0841860:CDS
GATGATGCATCAGTTCCATA+AGG	0.540398	5_4:+18636635	None:intergenic
GTTAAAGCCAAATGAAGTAA+TGG	0.545862	5_4:-18635824	Msa0841860:CDS
AGAATCTTATGGCTGAAAGA+AGG	0.549094	5_4:-18636379	Msa0841860:CDS
TTATGGTGGGAGGTGTCTCT+AGG	0.550677	5_4:-18635060	Msa0841860:exon
TTGTTGGAAGTGAGAACAAG+AGG	0.555475	5_4:-18636523	Msa0841860:CDS
AGTTACTACTCCCTAATGGT+TGG	0.559379	5_4:-18636754	Msa0841860:CDS
TTATTCATAGTTCACAAAAG+TGG	0.563281	5_4:-18636878	Msa0841860:five_prime_UTR
AGGTGTCTCTAGGAAAATGA+TGG	0.564458	5_4:-18635050	Msa0841860:exon
CAAGAAGAAATGGAGGAAGA+AGG	0.564987	5_4:-18635883	Msa0841860:CDS
GTGAACACATTAGAAGCATT+AGG	0.568569	5_4:-18635613	Msa0841860:CDS
ACTGTTGACAGTAACAATCC+TGG	0.569200	5_4:+18635634	None:intergenic
GTTGAGAATGAAGCAAATGA+AGG	0.578645	5_4:+18636683	None:intergenic
TAAAATCAGCTGCAAAGTTG+AGG	0.582223	5_4:-18636489	Msa0841860:CDS
CCTGTATTTAACATACACTA+GGG	0.586177	5_4:-18634879	Msa0841860:three_prime_UTR
TCCTTTGTATCAAGTTGCAG+TGG	0.602054	5_4:-18634679	Msa0841860:three_prime_UTR
GCCACTGCAACTTGATACAA+AGG	0.603330	5_4:+18634678	None:intergenic
TAACACACTGGTGAATCTCA+AGG	0.606173	5_4:+18635590	None:intergenic
TCAGGAATGCAGGTTATGGT+GGG	0.610095	5_4:-18635073	Msa0841860:CDS
CCTAGTGTATGTTAAATACA+GGG	0.610870	5_4:+18634880	None:intergenic
TTGAGAATGAAGCAAATGAA+GGG	0.614806	5_4:+18636684	None:intergenic
AATGGTAAGAAATTCCCCTA+AGG	0.619045	5_4:-18635806	Msa0841860:intron
TGAAACTGCTTATAACACAC+TGG	0.622427	5_4:+18635578	None:intergenic
GGTGCTGAATCATCAAACTC+AGG	0.624297	5_4:+18636584	None:intergenic
AGGGACAATTGACCTAAGCA+TGG	0.627542	5_4:+18636328	None:intergenic
TAGTAACTCATTCAAACCAG+TGG	0.629735	5_4:+18636769	None:intergenic
GGAAATAAACCATACCTTAG+GGG	0.645486	5_4:+18635792	None:intergenic
GGAATGCAGGTTATGGTGGG+AGG	0.648346	5_4:-18635070	Msa0841860:CDS
AAACAGATAAGTCTTAACAA+TGG	0.653905	5_4:+18636915	None:intergenic
TAGCTCCAAGAAAAGACACA+TGG	0.656108	5_4:-18636802	Msa0841860:CDS
ATTGCAAGCATCTTGCTCAG+AGG	0.660283	5_4:-18635545	Msa0841860:intron
AAAATCACTTTGAATCCACG+TGG	0.675006	5_4:+18634769	None:intergenic
ATGAAGTTGAACAAAATGGG+AGG	0.684237	5_4:+18636939	None:intergenic
AATTGTCCCTAAGATCAGCA+AGG	0.709185	5_4:-18636315	Msa0841860:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAATGTAAATTTTGTAAGA+TGG	-	chr5_4:18635669-18635688	Msa0841860:CDS	15.0%
!!	ATTACATTTATTCATAAACT+TGG	+	chr5_4:18635903-18635922	None:intergenic	15.0%
!!	TTATGAATAAATGTAATGAA+TGG	-	chr5_4:18635906-18635925	Msa0841860:CDS	15.0%
!!!	ATGCTTTAAAATTTCTTTTT+TGG	-	chr5_4:18636918-18636937	Msa0841860:five_prime_UTR	15.0%
!!!	TGCTTTAAAATTTCTTTTTT+GGG	-	chr5_4:18636919-18636938	Msa0841860:five_prime_UTR	15.0%
!!!	AAAATGTAAATTTTGTAAGA+TGG	-	chr5_4:18635669-18635688	Msa0841860:CDS	15.0%
!!	ATTACATTTATTCATAAACT+TGG	+	chr5_4:18635903-18635922	None:intergenic	15.0%
!!	TTATGAATAAATGTAATGAA+TGG	-	chr5_4:18635906-18635925	Msa0841860:CDS	15.0%
!!!	ATGCTTTAAAATTTCTTTTT+TGG	-	chr5_4:18636918-18636937	Msa0841860:five_prime_UTR	15.0%
!!!	TGCTTTAAAATTTCTTTTTT+GGG	-	chr5_4:18636919-18636938	Msa0841860:five_prime_UTR	15.0%
!!	CTGAACATAAATACATATAT+CGG	+	chr5_4:18635458-18635477	None:intergenic	20.0%
!!!	AAACCTTTTAGAAATTTCTA+AGG	-	chr5_4:18635795-18635814	Msa0841860:intron	20.0%
!!!	CGTAGTTTTTAATAAAATGA+CGG	+	chr5_4:18636184-18636203	None:intergenic	20.0%
!!	ATAATTGATCATGAAAAGTT+TGG	-	chr5_4:18636223-18636242	Msa0841860:intron	20.0%
!!	TTGAATTATTGATATTGAAG+AGG	+	chr5_4:18636666-18636685	None:intergenic	20.0%
!!	TCTTCAATATCAATAATTCA+AGG	-	chr5_4:18636665-18636684	Msa0841860:CDS	20.0%
!!	TTATCAATGTACTACTAAAA+AGG	+	chr5_4:18636833-18636852	None:intergenic	20.0%
!!!	TTTTAGTAGTACATTGATAA+TGG	-	chr5_4:18636833-18636852	Msa0841860:CDS	20.0%
!!	CTGAACATAAATACATATAT+CGG	+	chr5_4:18635458-18635477	None:intergenic	20.0%
!!!	AAACCTTTTAGAAATTTCTA+AGG	-	chr5_4:18635795-18635814	Msa0841860:intron	20.0%
!!!	CGTAGTTTTTAATAAAATGA+CGG	+	chr5_4:18636184-18636203	None:intergenic	20.0%
!!	ATAATTGATCATGAAAAGTT+TGG	-	chr5_4:18636223-18636242	Msa0841860:intron	20.0%
!!	TTGAATTATTGATATTGAAG+AGG	+	chr5_4:18636666-18636685	None:intergenic	20.0%
!!	TCTTCAATATCAATAATTCA+AGG	-	chr5_4:18636665-18636684	Msa0841860:CDS	20.0%
!!	TTATCAATGTACTACTAAAA+AGG	+	chr5_4:18636833-18636852	None:intergenic	20.0%
!!!	TTTTAGTAGTACATTGATAA+TGG	-	chr5_4:18636833-18636852	Msa0841860:CDS	20.0%
!	AAACAGATAAGTCTTAACAA+TGG	+	chr5_4:18634731-18634750	None:intergenic	25.0%
!	ATTGTTAAGACTTATCTGTT+TGG	-	chr5_4:18634730-18634749	Msa0841860:three_prime_UTR	25.0%
!	TTATTCATAGTTCACAAAAG+TGG	-	chr5_4:18634765-18634784	Msa0841860:three_prime_UTR	25.0%
!	TATTCATAGTTCACAAAAGT+GGG	-	chr5_4:18634766-18634785	Msa0841860:three_prime_UTR	25.0%
!!	ATTTTCATCAAATGAGTCAA+AGG	+	chr5_4:18634916-18634935	None:intergenic	25.0%
!	TAGTAAGTTACAAGAAGAAA+TGG	-	chr5_4:18635750-18635769	Msa0841860:intron	25.0%
!	ACTCCTTAGAAATTTCTAAA+AGG	+	chr5_4:18635801-18635820	None:intergenic	25.0%
!	TTTCTTACCATTACTTCATT+TGG	+	chr5_4:18635829-18635848	None:intergenic	25.0%
!!	TCTATAATTAATTTTTCGCC+TGG	-	chr5_4:18636319-18636338	Msa0841860:CDS	25.0%
!	AATCGAATGTAATAAATTCC+AGG	+	chr5_4:18636340-18636359	None:intergenic	25.0%
!!!	TAGTCTTTTTTTTGGTTATG+CGG	+	chr5_4:18636420-18636439	None:intergenic	25.0%
!	ATTTGCAGATGATGAAAAAA+AGG	-	chr5_4:18636631-18636650	Msa0841860:CDS	25.0%
!	TAAACCAAAGCTAACTTATT+TGG	+	chr5_4:18636721-18636740	None:intergenic	25.0%
!!	TTTAAAGCATATGCATATTC+AGG	+	chr5_4:18636908-18636927	None:intergenic	25.0%
!!	GTGAATGACACAATTTTAAA+AGG	-	chr5_4:18636996-18637015	Msa0841860:five_prime_UTR	25.0%
!!!	ATGACACAATTTTAAAAGGT+TGG	-	chr5_4:18637000-18637019	Msa0841860:five_prime_UTR	25.0%
!	AAACAGATAAGTCTTAACAA+TGG	+	chr5_4:18634731-18634750	None:intergenic	25.0%
!	ATTGTTAAGACTTATCTGTT+TGG	-	chr5_4:18634730-18634749	Msa0841860:three_prime_UTR	25.0%
!	TTATTCATAGTTCACAAAAG+TGG	-	chr5_4:18634765-18634784	Msa0841860:three_prime_UTR	25.0%
!	TATTCATAGTTCACAAAAGT+GGG	-	chr5_4:18634766-18634785	Msa0841860:three_prime_UTR	25.0%
!!	ATTTTCATCAAATGAGTCAA+AGG	+	chr5_4:18634916-18634935	None:intergenic	25.0%
!	TAGTAAGTTACAAGAAGAAA+TGG	-	chr5_4:18635750-18635769	Msa0841860:intron	25.0%
!	ACTCCTTAGAAATTTCTAAA+AGG	+	chr5_4:18635801-18635820	None:intergenic	25.0%
!	TTTCTTACCATTACTTCATT+TGG	+	chr5_4:18635829-18635848	None:intergenic	25.0%
!!	TCTATAATTAATTTTTCGCC+TGG	-	chr5_4:18636319-18636338	Msa0841860:CDS	25.0%
!	AATCGAATGTAATAAATTCC+AGG	+	chr5_4:18636340-18636359	None:intergenic	25.0%
!!!	TAGTCTTTTTTTTGGTTATG+CGG	+	chr5_4:18636420-18636439	None:intergenic	25.0%
!	ATTTGCAGATGATGAAAAAA+AGG	-	chr5_4:18636631-18636650	Msa0841860:CDS	25.0%
!	TAAACCAAAGCTAACTTATT+TGG	+	chr5_4:18636721-18636740	None:intergenic	25.0%
!!	TTTAAAGCATATGCATATTC+AGG	+	chr5_4:18636908-18636927	None:intergenic	25.0%
!!	GTGAATGACACAATTTTAAA+AGG	-	chr5_4:18636996-18637015	Msa0841860:five_prime_UTR	25.0%
	GGAATGAAGTTGAACAAAAT+GGG	+	chr5_4:18634710-18634729	None:intergenic	30.0%
	TGGAATGAAGTTGAACAAAA+TGG	+	chr5_4:18634711-18634730	None:intergenic	30.0%
	TGGGAAAAGAGAAAGAAAAA+TGG	-	chr5_4:18634785-18634804	Msa0841860:three_prime_UTR	30.0%
	AAAATGGAACTTTCTCAACT+TGG	-	chr5_4:18634801-18634820	Msa0841860:three_prime_UTR	30.0%
	TTGAGAATGAAGCAAATGAA+GGG	+	chr5_4:18634962-18634981	None:intergenic	30.0%
	CATTCAAATCTATGGTCTAA+TGG	+	chr5_4:18634987-18635006	None:intergenic	30.0%
	CATAAGGACATTCAAATCTA+TGG	+	chr5_4:18634995-18635014	None:intergenic	30.0%
	CATAGATTTGAATGTCCTTA+TGG	-	chr5_4:18634993-18635012	Msa0841860:three_prime_UTR	30.0%
	TTTACCACAACAAGAAAGTA+TGG	-	chr5_4:18635085-18635104	Msa0841860:CDS	30.0%
!	TGAAACTCCAGTTTTTAACA+TGG	-	chr5_4:18635187-18635206	Msa0841860:intron	30.0%
!	GAAACTCCAGTTTTTAACAT+GGG	-	chr5_4:18635188-18635207	Msa0841860:intron	30.0%
	AGAAAAAAGCCAAATCCAAA+AGG	-	chr5_4:18635222-18635241	Msa0841860:intron	30.0%
	GAAAAAAGCCAAATCCAAAA+GGG	-	chr5_4:18635223-18635242	Msa0841860:intron	30.0%
!	CATAGTGTGTGTTCTAATTT+TGG	-	chr5_4:18635547-18635566	Msa0841860:CDS	30.0%
!	GTAAATTTTGTAAGATGGAC+AGG	-	chr5_4:18635674-18635693	Msa0841860:CDS	30.0%
	TAAGTTACAAGAAGAAATGG+AGG	-	chr5_4:18635753-18635772	Msa0841860:intron	30.0%
	GTTAAAGCCAAATGAAGTAA+TGG	-	chr5_4:18635819-18635838	Msa0841860:CDS	30.0%
	AGGAAATAAACCATACCTTA+GGG	+	chr5_4:18635855-18635874	None:intergenic	30.0%
	AAGGAAATAAACCATACCTT+AGG	+	chr5_4:18635856-18635875	None:intergenic	30.0%
	GATTATGCATTAGTTGTTCA+AGG	+	chr5_4:18635875-18635894	None:intergenic	30.0%
!!	TTTTTCAGTTTGATGTTGAG+AGG	-	chr5_4:18635944-18635963	Msa0841860:CDS	30.0%
	AACCATGCAAACAATTATTG+AGG	+	chr5_4:18636447-18636466	None:intergenic	30.0%
	CATATTATTCCCATGTGTTT+AGG	-	chr5_4:18636496-18636515	Msa0841860:CDS	30.0%
	AGATAAAGCAATCACTATTC+AGG	-	chr5_4:18636552-18636571	Msa0841860:CDS	30.0%
!	GATTCCAAATAAGTTAGCTT+TGG	-	chr5_4:18636714-18636733	Msa0841860:CDS	30.0%
	CCTAGTGTATGTTAAATACA+GGG	+	chr5_4:18636766-18636785	None:intergenic	30.0%
	CCTGTATTTAACATACACTA+GGG	-	chr5_4:18636764-18636783	Msa0841860:CDS	30.0%
!	AGGTGGAATTTTATCACAAT+GGG	+	chr5_4:18636813-18636832	None:intergenic	30.0%
!	AAGGTGGAATTTTATCACAA+TGG	+	chr5_4:18636814-18636833	None:intergenic	30.0%
	TCAATGTACTACTAAAAAGG+TGG	+	chr5_4:18636830-18636849	None:intergenic	30.0%
	GGAATGAAGTTGAACAAAAT+GGG	+	chr5_4:18634710-18634729	None:intergenic	30.0%
	TGGAATGAAGTTGAACAAAA+TGG	+	chr5_4:18634711-18634730	None:intergenic	30.0%
	TGGGAAAAGAGAAAGAAAAA+TGG	-	chr5_4:18634785-18634804	Msa0841860:three_prime_UTR	30.0%
	AAAATGGAACTTTCTCAACT+TGG	-	chr5_4:18634801-18634820	Msa0841860:three_prime_UTR	30.0%
	TTGAGAATGAAGCAAATGAA+GGG	+	chr5_4:18634962-18634981	None:intergenic	30.0%
	CATTCAAATCTATGGTCTAA+TGG	+	chr5_4:18634987-18635006	None:intergenic	30.0%
	CATAAGGACATTCAAATCTA+TGG	+	chr5_4:18634995-18635014	None:intergenic	30.0%
	CATAGATTTGAATGTCCTTA+TGG	-	chr5_4:18634993-18635012	Msa0841860:three_prime_UTR	30.0%
	TTTACCACAACAAGAAAGTA+TGG	-	chr5_4:18635085-18635104	Msa0841860:CDS	30.0%
!	TGAAACTCCAGTTTTTAACA+TGG	-	chr5_4:18635187-18635206	Msa0841860:intron	30.0%
!	GAAACTCCAGTTTTTAACAT+GGG	-	chr5_4:18635188-18635207	Msa0841860:intron	30.0%
	AGAAAAAAGCCAAATCCAAA+AGG	-	chr5_4:18635222-18635241	Msa0841860:intron	30.0%
	GAAAAAAGCCAAATCCAAAA+GGG	-	chr5_4:18635223-18635242	Msa0841860:intron	30.0%
!	CATAGTGTGTGTTCTAATTT+TGG	-	chr5_4:18635547-18635566	Msa0841860:CDS	30.0%
!	GTAAATTTTGTAAGATGGAC+AGG	-	chr5_4:18635674-18635693	Msa0841860:CDS	30.0%
	TAAGTTACAAGAAGAAATGG+AGG	-	chr5_4:18635753-18635772	Msa0841860:intron	30.0%
	GTTAAAGCCAAATGAAGTAA+TGG	-	chr5_4:18635819-18635838	Msa0841860:CDS	30.0%
	AGGAAATAAACCATACCTTA+GGG	+	chr5_4:18635855-18635874	None:intergenic	30.0%
	AAGGAAATAAACCATACCTT+AGG	+	chr5_4:18635856-18635875	None:intergenic	30.0%
	GATTATGCATTAGTTGTTCA+AGG	+	chr5_4:18635875-18635894	None:intergenic	30.0%
!!	TTTTTCAGTTTGATGTTGAG+AGG	-	chr5_4:18635944-18635963	Msa0841860:CDS	30.0%
	AACCATGCAAACAATTATTG+AGG	+	chr5_4:18636447-18636466	None:intergenic	30.0%
	CATATTATTCCCATGTGTTT+AGG	-	chr5_4:18636496-18636515	Msa0841860:CDS	30.0%
	AGATAAAGCAATCACTATTC+AGG	-	chr5_4:18636552-18636571	Msa0841860:CDS	30.0%
!	GATTCCAAATAAGTTAGCTT+TGG	-	chr5_4:18636714-18636733	Msa0841860:CDS	30.0%
	CCTAGTGTATGTTAAATACA+GGG	+	chr5_4:18636766-18636785	None:intergenic	30.0%
	CCTGTATTTAACATACACTA+GGG	-	chr5_4:18636764-18636783	Msa0841860:CDS	30.0%
!	AGGTGGAATTTTATCACAAT+GGG	+	chr5_4:18636813-18636832	None:intergenic	30.0%
!	AAGGTGGAATTTTATCACAA+TGG	+	chr5_4:18636814-18636833	None:intergenic	30.0%
	TCAATGTACTACTAAAAAGG+TGG	+	chr5_4:18636830-18636849	None:intergenic	30.0%
	ATGAAGTTGAACAAAATGGG+AGG	+	chr5_4:18634707-18634726	None:intergenic	35.0%
!!	TTCTCAACTTGGTTTTCTTG+AGG	-	chr5_4:18634812-18634831	Msa0841860:three_prime_UTR	35.0%
!	GTATTCCATGTGTCTTTTCT+TGG	+	chr5_4:18634849-18634868	None:intergenic	35.0%
	ACATGGAATACTTTATCCAC+TGG	-	chr5_4:18634858-18634877	Msa0841860:three_prime_UTR	35.0%
	TAGTAACTCATTCAAACCAG+TGG	+	chr5_4:18634877-18634896	None:intergenic	35.0%
	AATGAGTTACTACTCCCTAA+TGG	-	chr5_4:18634885-18634904	Msa0841860:three_prime_UTR	35.0%
	GCAAATGAAGGGTTTAAAGA+TGG	+	chr5_4:18634951-18634970	None:intergenic	35.0%
	GTTGAGAATGAAGCAAATGA+AGG	+	chr5_4:18634963-18634982	None:intergenic	35.0%
	TCATCATACCCTTATCTTGA+TGG	-	chr5_4:18635026-18635045	Msa0841860:three_prime_UTR	35.0%
	CTGAGAATCCATCAAGATAA+GGG	+	chr5_4:18635037-18635056	None:intergenic	35.0%
	ACTGAGAATCCATCAAGATA+AGG	+	chr5_4:18635038-18635057	None:intergenic	35.0%
!	CTTTCTTGTTGTGGTAAAAC+TGG	+	chr5_4:18635083-18635102	None:intergenic	35.0%
	TCTTCCATACTTTCTTGTTG+TGG	+	chr5_4:18635092-18635111	None:intergenic	35.0%
!	CAAGAAAGTATGGAAGAGTT+TGG	-	chr5_4:18635095-18635114	Msa0841860:CDS	35.0%
	ATGGAAGAGTTTGGATTTGT+TGG	-	chr5_4:18635104-18635123	Msa0841860:CDS	35.0%
	TAAAATCAGCTGCAAAGTTG+AGG	-	chr5_4:18635154-18635173	Msa0841860:intron	35.0%
	CACAAACCCATGTTAAAAAC+TGG	+	chr5_4:18635197-18635216	None:intergenic	35.0%
!	GTTTTTAACATGGGTTTGTG+TGG	-	chr5_4:18635197-18635216	Msa0841860:intron	35.0%
	ACAGCCTTCAAAGAATCTTA+TGG	-	chr5_4:18635253-18635272	Msa0841860:intron	35.0%
	TCAGCCATAAGATTCTTTGA+AGG	+	chr5_4:18635260-18635279	None:intergenic	35.0%
	AGAATCTTATGGCTGAAAGA+AGG	-	chr5_4:18635264-18635283	Msa0841860:intron	35.0%
!	CATTGACTAGCACTTGTATT+TGG	-	chr5_4:18635609-18635628	Msa0841860:CDS	35.0%
!	ACATGAAAGAGCTTCTAGAA+AGG	-	chr5_4:18635725-18635744	Msa0841860:intron	35.0%
	AATGGTAAGAAATTCCCCTA+AGG	-	chr5_4:18635837-18635856	Msa0841860:CDS	35.0%
	TAAGAAATTCCCCTAAGGTA+TGG	-	chr5_4:18635842-18635861	Msa0841860:CDS	35.0%
	GGAAATAAACCATACCTTAG+GGG	+	chr5_4:18635854-18635873	None:intergenic	35.0%
!!	GTGAACACATTAGAAGCATT+AGG	-	chr5_4:18636030-18636049	Msa0841860:intron	35.0%
	TGAAACTGCTTATAACACAC+TGG	+	chr5_4:18636068-18636087	None:intergenic	35.0%
	AGTAAAACCCTAAGCATGTT+CGG	-	chr5_4:18636123-18636142	Msa0841860:intron	35.0%
	TATCAATCCGAACATGCTTA+GGG	+	chr5_4:18636133-18636152	None:intergenic	35.0%
!	AACTACGCTTTTGAGCTTTA+AGG	-	chr5_4:18636197-18636216	Msa0841860:intron	35.0%
!!	ACTACGCTTTTGAGCTTTAA+GGG	-	chr5_4:18636198-18636217	Msa0841860:intron	35.0%
!!!	GAGGCGAATAGTCTTTTTTT+TGG	+	chr5_4:18636428-18636447	None:intergenic	35.0%
	GTGATTGCTTTATCTCTTCA+GGG	+	chr5_4:18636547-18636566	None:intergenic	35.0%
	AGTGATTGCTTTATCTCTTC+AGG	+	chr5_4:18636548-18636567	None:intergenic	35.0%
	CCCTGTATTTAACATACACT+AGG	-	chr5_4:18636763-18636782	Msa0841860:CDS	35.0%
	CCCTAGTGTATGTTAAATAC+AGG	+	chr5_4:18636767-18636786	None:intergenic	35.0%
!	TTTGAATCCACGTGGATTTT+TGG	+	chr5_4:18636869-18636888	None:intergenic	35.0%
	AAAATCACTTTGAATCCACG+TGG	+	chr5_4:18636877-18636896	None:intergenic	35.0%
	ATGAAGTTGAACAAAATGGG+AGG	+	chr5_4:18634707-18634726	None:intergenic	35.0%
!!	TTCTCAACTTGGTTTTCTTG+AGG	-	chr5_4:18634812-18634831	Msa0841860:three_prime_UTR	35.0%
!	GTATTCCATGTGTCTTTTCT+TGG	+	chr5_4:18634849-18634868	None:intergenic	35.0%
	ACATGGAATACTTTATCCAC+TGG	-	chr5_4:18634858-18634877	Msa0841860:three_prime_UTR	35.0%
	TAGTAACTCATTCAAACCAG+TGG	+	chr5_4:18634877-18634896	None:intergenic	35.0%
	AATGAGTTACTACTCCCTAA+TGG	-	chr5_4:18634885-18634904	Msa0841860:three_prime_UTR	35.0%
	GCAAATGAAGGGTTTAAAGA+TGG	+	chr5_4:18634951-18634970	None:intergenic	35.0%
	GTTGAGAATGAAGCAAATGA+AGG	+	chr5_4:18634963-18634982	None:intergenic	35.0%
	TCATCATACCCTTATCTTGA+TGG	-	chr5_4:18635026-18635045	Msa0841860:three_prime_UTR	35.0%
	CTGAGAATCCATCAAGATAA+GGG	+	chr5_4:18635037-18635056	None:intergenic	35.0%
	ACTGAGAATCCATCAAGATA+AGG	+	chr5_4:18635038-18635057	None:intergenic	35.0%
!	CTTTCTTGTTGTGGTAAAAC+TGG	+	chr5_4:18635083-18635102	None:intergenic	35.0%
	TCTTCCATACTTTCTTGTTG+TGG	+	chr5_4:18635092-18635111	None:intergenic	35.0%
!	CAAGAAAGTATGGAAGAGTT+TGG	-	chr5_4:18635095-18635114	Msa0841860:CDS	35.0%
	ATGGAAGAGTTTGGATTTGT+TGG	-	chr5_4:18635104-18635123	Msa0841860:CDS	35.0%
	TAAAATCAGCTGCAAAGTTG+AGG	-	chr5_4:18635154-18635173	Msa0841860:intron	35.0%
	CACAAACCCATGTTAAAAAC+TGG	+	chr5_4:18635197-18635216	None:intergenic	35.0%
!	GTTTTTAACATGGGTTTGTG+TGG	-	chr5_4:18635197-18635216	Msa0841860:intron	35.0%
	ACAGCCTTCAAAGAATCTTA+TGG	-	chr5_4:18635253-18635272	Msa0841860:intron	35.0%
	TCAGCCATAAGATTCTTTGA+AGG	+	chr5_4:18635260-18635279	None:intergenic	35.0%
	AGAATCTTATGGCTGAAAGA+AGG	-	chr5_4:18635264-18635283	Msa0841860:intron	35.0%
!	CATTGACTAGCACTTGTATT+TGG	-	chr5_4:18635609-18635628	Msa0841860:CDS	35.0%
!	ACATGAAAGAGCTTCTAGAA+AGG	-	chr5_4:18635725-18635744	Msa0841860:intron	35.0%
	AATGGTAAGAAATTCCCCTA+AGG	-	chr5_4:18635837-18635856	Msa0841860:CDS	35.0%
	TAAGAAATTCCCCTAAGGTA+TGG	-	chr5_4:18635842-18635861	Msa0841860:CDS	35.0%
	GGAAATAAACCATACCTTAG+GGG	+	chr5_4:18635854-18635873	None:intergenic	35.0%
!!	GTGAACACATTAGAAGCATT+AGG	-	chr5_4:18636030-18636049	Msa0841860:intron	35.0%
	TGAAACTGCTTATAACACAC+TGG	+	chr5_4:18636068-18636087	None:intergenic	35.0%
	AGTAAAACCCTAAGCATGTT+CGG	-	chr5_4:18636123-18636142	Msa0841860:intron	35.0%
	TATCAATCCGAACATGCTTA+GGG	+	chr5_4:18636133-18636152	None:intergenic	35.0%
!	AACTACGCTTTTGAGCTTTA+AGG	-	chr5_4:18636197-18636216	Msa0841860:intron	35.0%
!!	ACTACGCTTTTGAGCTTTAA+GGG	-	chr5_4:18636198-18636217	Msa0841860:intron	35.0%
!!!	GAGGCGAATAGTCTTTTTTT+TGG	+	chr5_4:18636428-18636447	None:intergenic	35.0%
	GTGATTGCTTTATCTCTTCA+GGG	+	chr5_4:18636547-18636566	None:intergenic	35.0%
	AGTGATTGCTTTATCTCTTC+AGG	+	chr5_4:18636548-18636567	None:intergenic	35.0%
	CCCTGTATTTAACATACACT+AGG	-	chr5_4:18636763-18636782	Msa0841860:CDS	35.0%
	CCCTAGTGTATGTTAAATAC+AGG	+	chr5_4:18636767-18636786	None:intergenic	35.0%
!	TTTGAATCCACGTGGATTTT+TGG	+	chr5_4:18636869-18636888	None:intergenic	35.0%
	AAAATCACTTTGAATCCACG+TGG	+	chr5_4:18636877-18636896	None:intergenic	35.0%
!!	AATGGGAGGAGTTTCAAGTT+TGG	+	chr5_4:18634693-18634712	None:intergenic	40.0%
	TAGCTCCAAGAAAAGACACA+TGG	-	chr5_4:18634841-18634860	Msa0841860:three_prime_UTR	40.0%
	AGTTACTACTCCCTAATGGT+TGG	-	chr5_4:18634889-18634908	Msa0841860:three_prime_UTR	40.0%
	AGTCAAAGGTCCAACCATTA+GGG	+	chr5_4:18634902-18634921	None:intergenic	40.0%
	GATGATGCATCAGTTCCATA+AGG	+	chr5_4:18635011-18635030	None:intergenic	40.0%
	TTGTTGGAAGTGAGAACAAG+AGG	-	chr5_4:18635120-18635139	Msa0841860:CDS	40.0%
!	TCCTTCAACCCTTTTGGATT+TGG	+	chr5_4:18635234-18635253	None:intergenic	40.0%
!!	GAAGAAAGCGTTTGAATGAC+AGG	-	chr5_4:18635288-18635307	Msa0841860:intron	40.0%
	AATTGTCCCTAAGATCAGCA+AGG	-	chr5_4:18635328-18635347	Msa0841860:intron	40.0%
	GAATCACCTTGCTGATCTTA+GGG	+	chr5_4:18635337-18635356	None:intergenic	40.0%
	TGAATCACCTTGCTGATCTT+AGG	+	chr5_4:18635338-18635357	None:intergenic	40.0%
	ATGGACAGGACATCAATTCT+AGG	-	chr5_4:18635688-18635707	Msa0841860:CDS	40.0%
	CAAGAAGAAATGGAGGAAGA+AGG	-	chr5_4:18635760-18635779	Msa0841860:intron	40.0%
!!	AGATACTGATTCTTGTGTCC+TGG	+	chr5_4:18635975-18635994	None:intergenic	40.0%
	ACTGTTGACAGTAACAATCC+TGG	+	chr5_4:18636012-18636031	None:intergenic	40.0%
	TAACACACTGGTGAATCTCA+AGG	+	chr5_4:18636056-18636075	None:intergenic	40.0%
	CTATCAATCCGAACATGCTT+AGG	+	chr5_4:18636134-18636153	None:intergenic	40.0%
	CGCCTCAATAATTGTTTGCA+TGG	-	chr5_4:18636442-18636461	Msa0841860:CDS	40.0%
	TTCCCATGTGTTTAGGTAGA+TGG	-	chr5_4:18636503-18636522	Msa0841860:CDS	40.0%
	GACCATCTACCTAAACACAT+GGG	+	chr5_4:18636508-18636527	None:intergenic	40.0%
	TGACCATCTACCTAAACACA+TGG	+	chr5_4:18636509-18636528	None:intergenic	40.0%
	CAATCACTATTCAGGAATGC+AGG	-	chr5_4:18636560-18636579	Msa0841860:CDS	40.0%
	CTATTCAGGAATGCAGGTTA+TGG	-	chr5_4:18636566-18636585	Msa0841860:CDS	40.0%
!	AGGTGTCTCTAGGAAAATGA+TGG	-	chr5_4:18636593-18636612	Msa0841860:CDS	40.0%
!	CTAGGAAAATGATGGAAAGC+TGG	-	chr5_4:18636601-18636620	Msa0841860:CDS	40.0%
!	TCCTTTGTATCAAGTTGCAG+TGG	-	chr5_4:18636964-18636983	Msa0841860:five_prime_UTR	40.0%
!!	AATGGGAGGAGTTTCAAGTT+TGG	+	chr5_4:18634693-18634712	None:intergenic	40.0%
	TAGCTCCAAGAAAAGACACA+TGG	-	chr5_4:18634841-18634860	Msa0841860:three_prime_UTR	40.0%
	AGTTACTACTCCCTAATGGT+TGG	-	chr5_4:18634889-18634908	Msa0841860:three_prime_UTR	40.0%
	AGTCAAAGGTCCAACCATTA+GGG	+	chr5_4:18634902-18634921	None:intergenic	40.0%
	GATGATGCATCAGTTCCATA+AGG	+	chr5_4:18635011-18635030	None:intergenic	40.0%
	TTGTTGGAAGTGAGAACAAG+AGG	-	chr5_4:18635120-18635139	Msa0841860:CDS	40.0%
!	TCCTTCAACCCTTTTGGATT+TGG	+	chr5_4:18635234-18635253	None:intergenic	40.0%
!!	GAAGAAAGCGTTTGAATGAC+AGG	-	chr5_4:18635288-18635307	Msa0841860:intron	40.0%
	AATTGTCCCTAAGATCAGCA+AGG	-	chr5_4:18635328-18635347	Msa0841860:intron	40.0%
	GAATCACCTTGCTGATCTTA+GGG	+	chr5_4:18635337-18635356	None:intergenic	40.0%
	TGAATCACCTTGCTGATCTT+AGG	+	chr5_4:18635338-18635357	None:intergenic	40.0%
	ATGGACAGGACATCAATTCT+AGG	-	chr5_4:18635688-18635707	Msa0841860:CDS	40.0%
	CAAGAAGAAATGGAGGAAGA+AGG	-	chr5_4:18635760-18635779	Msa0841860:intron	40.0%
!!	AGATACTGATTCTTGTGTCC+TGG	+	chr5_4:18635975-18635994	None:intergenic	40.0%
	ACTGTTGACAGTAACAATCC+TGG	+	chr5_4:18636012-18636031	None:intergenic	40.0%
	TAACACACTGGTGAATCTCA+AGG	+	chr5_4:18636056-18636075	None:intergenic	40.0%
	CTATCAATCCGAACATGCTT+AGG	+	chr5_4:18636134-18636153	None:intergenic	40.0%
	CGCCTCAATAATTGTTTGCA+TGG	-	chr5_4:18636442-18636461	Msa0841860:CDS	40.0%
	TTCCCATGTGTTTAGGTAGA+TGG	-	chr5_4:18636503-18636522	Msa0841860:CDS	40.0%
	GACCATCTACCTAAACACAT+GGG	+	chr5_4:18636508-18636527	None:intergenic	40.0%
	TGACCATCTACCTAAACACA+TGG	+	chr5_4:18636509-18636528	None:intergenic	40.0%
	CAATCACTATTCAGGAATGC+AGG	-	chr5_4:18636560-18636579	Msa0841860:CDS	40.0%
	CTATTCAGGAATGCAGGTTA+TGG	-	chr5_4:18636566-18636585	Msa0841860:CDS	40.0%
!	AGGTGTCTCTAGGAAAATGA+TGG	-	chr5_4:18636593-18636612	Msa0841860:CDS	40.0%
!	CTAGGAAAATGATGGAAAGC+TGG	-	chr5_4:18636601-18636620	Msa0841860:CDS	40.0%
!	TCCTTTGTATCAAGTTGCAG+TGG	-	chr5_4:18636964-18636983	Msa0841860:five_prime_UTR	40.0%
	GAGTCAAAGGTCCAACCATT+AGG	+	chr5_4:18634903-18634922	None:intergenic	45.0%
!	GGTGCTGAATCATCAAACTC+AGG	+	chr5_4:18635062-18635081	None:intergenic	45.0%
	GCCAAATCCAAAAGGGTTGA+AGG	-	chr5_4:18635230-18635249	Msa0841860:intron	45.0%
	ATGACAGGCTTTCCATGCTT+AGG	-	chr5_4:18635303-18635322	Msa0841860:intron	45.0%
	AGGGACAATTGACCTAAGCA+TGG	+	chr5_4:18635318-18635337	None:intergenic	45.0%
	TCGAGTATCAGTGTTCTGTC+TGG	-	chr5_4:18635508-18635527	Msa0841860:intron	45.0%
!!	CAGTAACAATCCTGGCTTTG+TGG	+	chr5_4:18636004-18636023	None:intergenic	45.0%
	ATTGCAAGCATCTTGCTCAG+AGG	-	chr5_4:18636098-18636117	Msa0841860:intron	45.0%
	TTCAGGAATGCAGGTTATGG+TGG	-	chr5_4:18636569-18636588	Msa0841860:CDS	45.0%
	TCAGGAATGCAGGTTATGGT+GGG	-	chr5_4:18636570-18636589	Msa0841860:CDS	45.0%
	GTTGTTGCCAAAAATCCACG+TGG	-	chr5_4:18636859-18636878	Msa0841860:exon	45.0%
	GCCACTGCAACTTGATACAA+AGG	+	chr5_4:18636968-18636987	None:intergenic	45.0%
	GAGTCAAAGGTCCAACCATT+AGG	+	chr5_4:18634903-18634922	None:intergenic	45.0%
!	GGTGCTGAATCATCAAACTC+AGG	+	chr5_4:18635062-18635081	None:intergenic	45.0%
	GCCAAATCCAAAAGGGTTGA+AGG	-	chr5_4:18635230-18635249	Msa0841860:intron	45.0%
	ATGACAGGCTTTCCATGCTT+AGG	-	chr5_4:18635303-18635322	Msa0841860:intron	45.0%
	AGGGACAATTGACCTAAGCA+TGG	+	chr5_4:18635318-18635337	None:intergenic	45.0%
	TCGAGTATCAGTGTTCTGTC+TGG	-	chr5_4:18635508-18635527	Msa0841860:intron	45.0%
!!	CAGTAACAATCCTGGCTTTG+TGG	+	chr5_4:18636004-18636023	None:intergenic	45.0%
	ATTGCAAGCATCTTGCTCAG+AGG	-	chr5_4:18636098-18636117	Msa0841860:intron	45.0%
	TTCAGGAATGCAGGTTATGG+TGG	-	chr5_4:18636569-18636588	Msa0841860:CDS	45.0%
	TCAGGAATGCAGGTTATGGT+GGG	-	chr5_4:18636570-18636589	Msa0841860:CDS	45.0%
	GTTGTTGCCAAAAATCCACG+TGG	-	chr5_4:18636859-18636878	Msa0841860:exon	45.0%
	GCCACTGCAACTTGATACAA+AGG	+	chr5_4:18636968-18636987	None:intergenic	45.0%
!	AGGCTGTCCTTCAACCCTTT+TGG	+	chr5_4:18635240-18635259	None:intergenic	50.0%
	TGATGTTGAGAGGAGAGACC+AGG	-	chr5_4:18635954-18635973	Msa0841860:CDS	50.0%
!!	TTATGGTGGGAGGTGTCTCT+AGG	-	chr5_4:18636583-18636602	Msa0841860:CDS	50.0%
!	AGGCTGTCCTTCAACCCTTT+TGG	+	chr5_4:18635240-18635259	None:intergenic	50.0%
	TGATGTTGAGAGGAGAGACC+AGG	-	chr5_4:18635954-18635973	Msa0841860:CDS	50.0%
!!	TTATGGTGGGAGGTGTCTCT+AGG	-	chr5_4:18636583-18636602	Msa0841860:CDS	50.0%
	ATCTGCTGTGCCACAAAGCC+AGG	-	chr5_4:18635991-18636010	Msa0841860:intron	55.0%
!	GGAATGCAGGTTATGGTGGG+AGG	-	chr5_4:18636573-18636592	Msa0841860:CDS	55.0%
	ATCTGCTGTGCCACAAAGCC+AGG	-	chr5_4:18635991-18636010	Msa0841860:intron	55.0%
!	GGAATGCAGGTTATGGTGGG+AGG	-	chr5_4:18636573-18636592	Msa0841860:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	18634643	18637022	18634643	ID=Msa0841860;Name=Msa0841860
chr5_4	mRNA	18634643	18637022	18634643	ID=Msa0841860-mRNA-1;Parent=Msa0841860;Name=Msa0841860-mRNA-1;_AED=0.06;_eAED=0.06;_QI=161\|1\|1\|1\|1\|1\|4\|418\|323
chr5_4	exon	18634643	18635147	18634643	ID=Msa0841860-mRNA-1:exon:7777;Parent=Msa0841860-mRNA-1
chr5_4	exon	18635546	18635713	18635546	ID=Msa0841860-mRNA-1:exon:7776;Parent=Msa0841860-mRNA-1
chr5_4	exon	18635807	18635977	18635807	ID=Msa0841860-mRNA-1:exon:7775;Parent=Msa0841860-mRNA-1
chr5_4	exon	18636316	18637022	18636316	ID=Msa0841860-mRNA-1:exon:7774;Parent=Msa0841860-mRNA-1
chr5_4	five_prime_UTR	18636862	18637022	18636862	ID=Msa0841860-mRNA-1:five_prime_utr;Parent=Msa0841860-mRNA-1
chr5_4	CDS	18636316	18636861	18636316	ID=Msa0841860-mRNA-1:cds;Parent=Msa0841860-mRNA-1
chr5_4	CDS	18635807	18635977	18635807	ID=Msa0841860-mRNA-1:cds;Parent=Msa0841860-mRNA-1
chr5_4	CDS	18635546	18635713	18635546	ID=Msa0841860-mRNA-1:cds;Parent=Msa0841860-mRNA-1
chr5_4	CDS	18635061	18635147	18635061	ID=Msa0841860-mRNA-1:cds;Parent=Msa0841860-mRNA-1
chr5_4	three_prime_UTR	18634643	18635060	18634643	ID=Msa0841860-mRNA-1:three_prime_utr;Parent=Msa0841860-mRNA-1

Gene Sequence

>Msa0841860

ATGGAACTTTCTCAACTTGGTTTTCTTGAGGAGCTACTAGCTCCAAGAAAAGACACATGGAATACTTTATCCACTGGTTTGAATGAGTTACTACTCCCTAATGGTTGGACCTTTGACTCATTTGATGAAAATCTTCTCATCAATCCATCTTTAAACCCTTCATTTGCTTCATTCTCAACACCATTAGACCATAGATTTGAATGTCCTTATGGAACTGATGCATCATCATACCCTTATCTTGATGGATTCTCAGTTCCTGAGTTTGATGATTCAGCACCAGTTTTACCACAACAAGAAAGTATGGAAGAGTTTGGATTTGTTGGAAGTGAGAACAAGAGGTTTGAAGAGAGTAAAATCAGCTGCAAAGTTGAGGAACAAGTTAGTGAAACTCCAGTTTTTAACATGGGTTTGTGTGGTGAGAAAAAAGCCAAATCCAAAAGGGTTGAAGGACAGCCTTCAAAGAATCTTATGGCTGAAAGAAGGAGAAGAAAGCGTTTGAATGACAGGCTTTCCATGCTTAGGTCAATTGTCCCTAAGATCAGCAAGATGGACAGGACATCAATTCTAGGAGATACAATTGATTACATGAAAGAGCTTCTAGAAAGGATTAGTAAGTTACAAGAAGAAATGGAGGAAGAAGGAACAAATCAGATAAACCTTTTAGAAATTTCTAAGGAGTTAAAGCCAAATGAAGTAATGGTAAGAAATTCCCCTAAGTTTGATGTTGAGAGGAGAGACCAGGACACAAGAATCAGTATCTGCTGTGCCACAAAGCCAGGATTGTTACTGTCAACAGTGAACACATTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGTTTCAATGATTTTTCATTGCAAGCATCTTGCTCAGAGGTAGATGGTCAGAGAAATTGTATGAACCCTGAAGAGATAAAGCAATCACTATTCAGGAATGCAGGTTATGGTGGGAGGTGTCTCTAG

Protein sequence

>Msa0841860

MELSQLGFLEELLAPRKDTWNTLSTGLNELLLPNGWTFDSFDENLLINPSLNPSFASFSTPLDHRFECPYGTDASSYPYLDGFSVPEFDDSAPVLPQQESMEEFGFVGSENKRFEESKISCKVEEQVSETPVFNMGLCGEKKAKSKRVEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERISKLQEEMEEEGTNQINLLEISKELKPNEVMVRNSPKFDVERRDQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSLQASCSEVDGQRNCMNPEEIKQSLFRNAGYGGRCL*