AlfalfaGEDB | Msa0720740

M. sativa cultivar zhongmu-4 / Msa0720740

KEGG: -
GO: GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008300 GO:0009056 GO:0009685 GO:0009889 GO:0009987 GO:0010371 GO:0010468 GO:0010556 GO:0010565 GO:0010817 GO:0016042 GO:0016054 GO:0016101 GO:0016103 GO:0016115 GO:0019216 GO:0019219 GO:0019222 GO:0019747 GO:0019752 GO:0031323 GO:0031326 GO:0032350 GO:0042445 GO:0042447 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044464 GO:0045487 GO:0046395 GO:0046885 GO:0046890 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0140110 GO:1901575 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0720740	XP_003612938.1	98.154	325	6	0	1	325	1	325	0.0	653

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0720740	sp\|Q9LSL1\|BH093_ARATH	48.087	366	134	10	1	325	1	351	4.42e-85	263

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0720740	A9YWR2	98.154	325	6	0	1	325	1	325	0.0	653

TFs/TRs:

Gene ID	Type	Classification
Msa0720740	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0077570	Msa0720740	-0.813790	2.141009e-51	-8.615850e-47
Msa0630770	Msa0720740	-0.800629	1.317679e-48	-8.615850e-47
Msa0720740	Msa0761310	0.887140	1.852768e-72	-8.615850e-47
Msa0720740	Msa0803780	0.918962	8.143404e-87	-8.615850e-47
Msa0720740	Msa0841860	0.857009	2.185016e-62	-8.615850e-47
Msa0720740	Msa0865420	0.803041	4.211630e-49	-8.615850e-47
Msa0720740	Msa1073050	0.801979	6.973153e-49	-8.615850e-47
Msa0720740	Msa1205490	0.800520	1.387058e-48	-8.615850e-47
Msa0720740	Msa1213040	0.807083	6.011414e-50	-8.615850e-47
Msa0720740	Msa1260220	0.804798	1.817151e-49	-8.615850e-47
Msa0720740	Msa1297690	0.815779	7.760901e-52	-8.615850e-47
Msa0720740	Msa1387450	-0.811968	5.369876e-51	-8.615850e-47
Msa0720740	Msa1407840	0.815959	7.076198e-52	-8.615850e-47
Msa0720740	Msa1437810	0.818948	1.501346e-52	-8.615850e-47
Msa0720740	Msa1454500	0.809835	1.555038e-50	-8.615850e-47
Msa0217490	Msa0720740	-0.824507	7.776805e-54	-8.615850e-47
Msa0269220	Msa0720740	-0.813982	1.942773e-51	-8.615850e-47
Msa0334450	Msa0720740	-0.804510	2.086369e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0720740	MtrunA17_Chr5g0411541	98.154	325	6	0	1	325	1	325	0.0	653
Msa0720740	MtrunA17_Chr3g0141091	51.873	347	135	14	1	325	1	337	2.37e-90	273
Msa0720740	MtrunA17_Chr3g0131691	46.798	203	79	7	142	322	287	482	1.95e-40	147
Msa0720740	MtrunA17_Chr7g0252041	44.211	190	85	3	154	322	284	473	3.68e-40	146
Msa0720740	MtrunA17_Chr1g0211081	28.972	214	104	5	144	315	305	512	1.46e-21	95.1
Msa0720740	MtrunA17_Chr5g0400671	26.630	184	125	3	142	315	140	323	1.95e-15	75.9
Msa0720740	MtrunA17_Chr1g0185621	30.939	181	103	3	155	314	474	653	2.38e-15	77.0
Msa0720740	MtrunA17_Chr4g0049331	22.222	297	186	7	32	314	37	302	6.09e-15	74.3
Msa0720740	MtrunA17_Chr8g0365711	27.513	189	121	3	142	316	230	416	6.81e-15	75.1
Msa0720740	MtrunA17_Chr2g0298751	33.758	157	82	4	152	286	48	204	1.57e-14	72.0
Msa0720740	MtrunA17_Chr8g0346161	30.556	180	99	6	154	318	289	457	1.97e-14	73.6
Msa0720740	MtrunA17_Chr5g0411341	30.723	166	89	5	153	295	490	652	9.20e-14	72.0
Msa0720740	MtrunA17_Chr2g0280161	27.778	162	101	3	146	291	161	322	1.40e-13	70.9
Msa0720740	MtrunA17_Chr4g0028071	53.448	58	27	0	155	212	148	205	1.57e-13	70.5
Msa0720740	MtrunA17_Chr2g0333611	26.984	189	117	5	145	316	32	216	2.10e-13	68.6
Msa0720740	MtrunA17_Chr2g0320291	30.114	176	104	5	149	311	126	295	2.64e-13	69.7
Msa0720740	MtrunA17_Chr7g0275821	28.261	138	96	2	153	288	249	385	8.42e-13	68.6
Msa0720740	MtrunA17_Chr5g0400621	30.464	151	96	2	147	288	148	298	8.73e-13	68.2
Msa0720740	MtrunA17_Chr8g0346151	30.872	149	86	4	154	287	277	423	1.30e-12	68.2
Msa0720740	MtrunA17_Chr7g0260841	35.789	95	59	1	153	245	352	446	3.17e-12	67.0
Msa0720740	MtrunA17_Chr8g0366751	29.375	160	93	4	153	292	459	618	5.81e-12	66.6
Msa0720740	MtrunA17_Chr4g0002781	27.778	180	107	4	109	276	138	306	2.05e-11	64.3
Msa0720740	MtrunA17_Chr6g0468461	31.098	164	94	6	133	288	148	300	3.38e-11	63.5
Msa0720740	MtrunA17_Chr4g0033291	43.478	69	39	0	143	211	142	210	5.59e-11	62.8
Msa0720740	MtrunA17_Chr4g0033281	43.478	69	39	0	143	211	140	208	6.52e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0720740	AT5G65640.1	48.087	366	134	10	1	325	1	351	4.49e-86	263
Msa0720740	AT5G10570.1	47.368	342	123	11	11	325	4	315	7.56e-75	233
Msa0720740	AT1G12860.1	46.739	184	83	3	154	322	265	448	1.23e-40	147
Msa0720740	AT3G26744.1	45.213	188	84	2	154	322	305	492	3.16e-39	144
Msa0720740	AT3G26744.4	45.213	188	84	2	154	322	305	492	3.16e-39	144
Msa0720740	AT3G26744.2	45.213	188	84	2	154	322	305	492	3.16e-39	144
Msa0720740	AT5G65640.2	41.281	281	113	10	1	242	1	268	2.76e-38	137
Msa0720740	AT1G12860.2	48.750	160	67	3	154	298	265	424	1.77e-36	136
Msa0720740	AT3G26744.6	46.951	164	68	2	154	298	305	468	3.03e-35	133
Msa0720740	AT2G16910.1	35.644	202	93	8	155	321	313	512	1.40e-21	95.9
Msa0720740	AT4G09820.1	30.058	173	106	4	145	316	352	510	1.96e-17	83.2
Msa0720740	AT4G29930.6	35.036	137	83	2	155	286	53	188	2.07e-16	77.4
Msa0720740	AT4G29930.2	35.766	137	79	3	155	286	53	185	2.56e-16	77.4
Msa0720740	AT4G29930.5	35.766	137	79	3	155	286	53	185	4.30e-16	76.6
Msa0720740	AT5G46760.1	30.220	182	108	5	153	319	412	589	5.32e-15	76.3
Msa0720740	AT2G46510.1	35.849	106	57	2	153	257	392	487	1.51e-14	74.7
Msa0720740	AT4G29930.4	51.667	60	29	0	155	214	53	112	2.53e-14	70.9
Msa0720740	AT4G17880.1	29.814	161	98	3	153	301	413	570	4.36e-14	73.2
Msa0720740	AT4G29930.1	51.667	60	29	0	155	214	53	112	6.12e-14	70.9
Msa0720740	AT4G29930.3	51.667	60	29	0	155	214	53	112	7.47e-14	70.9
Msa0720740	AT4G29930.7	51.667	60	29	0	155	214	53	112	7.47e-14	70.9
Msa0720740	AT4G37850.2	29.064	203	124	6	102	286	93	293	9.20e-14	71.2
Msa0720740	AT4G37850.1	29.064	203	124	6	102	286	93	293	9.20e-14	71.2
Msa0720740	AT5G57150.5	29.801	151	88	2	155	287	53	203	7.95e-13	67.4
Msa0720740	AT5G57150.1	28.834	163	98	2	155	299	53	215	8.22e-13	67.8
Msa0720740	AT5G57150.2	29.012	162	97	2	155	298	54	215	8.68e-13	67.4
Msa0720740	AT5G57150.3	29.801	151	88	2	155	287	54	204	1.08e-12	67.0
Msa0720740	AT2G28160.1	44.444	72	35	1	141	212	121	187	1.32e-12	67.8
Msa0720740	AT2G28160.2	44.444	72	35	1	141	212	121	187	1.33e-12	67.8
Msa0720740	AT5G57150.4	29.801	151	88	2	155	287	54	204	2.19e-12	66.6
Msa0720740	AT2G22760.2	28.105	153	94	4	157	295	120	270	5.03e-12	65.9
Msa0720740	AT2G22760.1	28.105	153	94	4	157	295	120	270	7.88e-12	65.5
Msa0720740	AT1G10610.2	31.469	143	81	3	151	278	229	369	2.29e-11	64.7
Msa0720740	AT1G10610.1	31.469	143	81	3	151	278	259	399	3.19e-11	64.3
Msa0720740	AT1G10610.3	31.469	143	81	3	151	278	162	302	3.46e-11	63.9
Msa0720740	AT1G63650.3	29.412	153	75	4	157	279	406	555	4.04e-11	64.3
Msa0720740	AT1G63650.1	29.412	153	75	4	157	279	406	555	4.04e-11	64.3
Msa0720740	AT1G63650.2	29.412	153	75	4	157	279	406	555	4.04e-11	64.3
Msa0720740	AT1G32640.1	45.763	59	32	0	153	211	449	507	4.99e-11	63.9

Find 88 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAACCAAAGCTAACTTATT+TGG	0.145838	5_1:+16909807	None:intergenic
TTTAAAGCATATGCATATTC+AGG	0.220131	5_1:+16909620	None:intergenic
TGAATCACCTTGCTGATCTT+AGG	0.222682	5_1:+16911195	None:intergenic
AGGCTGTCCTTCAACCCTTT+TGG	0.223211	5_1:+16911293	None:intergenic
AGTGATTGCTTTATCTCTTC+AGG	0.235636	5_1:+16909981	None:intergenic
TGGAATGAAGTTGAACAAAA+TGG	0.249862	5_1:+16911828	None:intergenic
TTATCATACCCTTATCTTGA+TGG	0.263234	5_1:-16911504	Msa0720740:CDS
ACTCCTTAGAAATTCCTAAA+AGG	0.268635	5_1:+16910732	None:intergenic
TTATCAATGCACTACTAAAA+AGG	0.282708	5_1:+16909695	None:intergenic
CATAGATTTGAATGTCCTTA+TGG	0.286074	5_1:-16911543	Msa0720740:CDS
TTCCCATGTGTTTAGGTAGA+TGG	0.318517	5_1:-16910023	Msa0720740:intron
TTTACCACAACAGGAAAGTA+TGG	0.321693	5_1:-16911445	Msa0720740:CDS
AGATAAAGCAATCACTATTC+AGG	0.330105	5_1:-16909974	Msa0720740:CDS
TTTCTTACCATTACTTCATT+TGG	0.330225	5_1:+16910704	None:intergenic
GAGTCAAAGGTCCAACCATT+AGG	0.336189	5_1:+16911636	None:intergenic
CAGGAAAGTATGGAAGAGTT+TGG	0.367985	5_1:-16911435	Msa0720740:CDS
CTTTCCTGTTGTGGTAAAAC+TGG	0.371402	5_1:+16911450	None:intergenic
CATTCAAATCTATGGTCTAA+TGG	0.372381	5_1:+16911552	None:intergenic
TAGTAAGTTACAAGAAGAAA+TGG	0.377782	5_1:-16910780	Msa0720740:CDS
AATGGGAGGAGTTTCAAGTT+TGG	0.387752	5_1:+16911846	None:intergenic
CAGTAACAATCCTGGCTTTG+TGG	0.397442	5_1:+16910529	None:intergenic
GAATCACCTTGCTGATCTTA+GGG	0.398992	5_1:+16911196	None:intergenic
AGGTGTCTCTAGGAAAATAA+TGG	0.403397	5_1:-16909933	Msa0720740:exon
CCCTAGTGTATGTTAAATAC+AGG	0.405026	5_1:+16909761	None:intergenic
AATGAGTTACTACTCCCTAA+TGG	0.409168	5_1:-16911651	Msa0720740:CDS
CATAAGGACATTCAAATCTA+TGG	0.410090	5_1:+16911544	None:intergenic
ACAGCCTTCAAAGAATCTTA+TGG	0.411193	5_1:-16911277	Msa0720740:CDS
ATGGACAGGACATCAATTCT+AGG	0.415879	5_1:-16910842	Msa0720740:CDS
ATCTGCTGTGCCACAAAGCC+AGG	0.416938	5_1:-16910539	Msa0720740:CDS
GCAAATGAAGGGTTTAAAGA+TGG	0.426120	5_1:+16911588	None:intergenic
CTATTCAGGAATGCAGGTTA+TGG	0.429722	5_1:-16909960	Msa0720740:CDS
GTGATTGCTTTATCTCTTCA+GGG	0.432133	5_1:+16909982	None:intergenic
TCTTCAATATCAATAATTCA+AGG	0.432387	5_1:-16909861	Msa0720740:three_prime_UTR
GAAGAAAGCGTTTGAATGAC+AGG	0.437266	5_1:-16911242	Msa0720740:CDS
GATTCCAAATAAGTTAGCTT+TGG	0.441100	5_1:-16909811	Msa0720740:three_prime_UTR
GGAATGAAGTTGAACAAAAT+GGG	0.446885	5_1:+16911829	None:intergenic
TCAGCCATAAGATTCTTTGA+AGG	0.448137	5_1:+16911273	None:intergenic
AGTCAAAGGTCCAACCATTA+GGG	0.456761	5_1:+16911637	None:intergenic
TGATGTTGAGAGGGGAGACC+AGG	0.460810	5_1:-16910576	Msa0720740:CDS
AAAATGGAACTTTCTCAACT+TGG	0.469304	5_1:-16911735	Msa0720740:CDS
CTAGGAAAATAATGGAAAGC+TGG	0.474248	5_1:-16909925	Msa0720740:exon
TATTCATAGTTCACAAAAGT+GGG	0.479190	5_1:-16911770	Msa0720740:five_prime_UTR
ATGACAGGCTTTCCATGCTT+AGG	0.479470	5_1:-16911227	Msa0720740:CDS
GCCAAATCCAAAAGGGTTGA+AGG	0.482278	5_1:-16911300	Msa0720740:CDS
CCCTGTATTTAACATACACT+AGG	0.484133	5_1:-16909762	Msa0720740:three_prime_UTR
AGATGCTGATTCTTGTGTCC+TGG	0.493855	5_1:+16910558	None:intergenic
ACTGAGAATCCATCAAGATA+AGG	0.498561	5_1:+16911495	None:intergenic
CTGAGAATCCATCAAGATAA+GGG	0.499837	5_1:+16911496	None:intergenic
TAAGTTACAAGAAGAAATGG+AGG	0.505778	5_1:-16910777	Msa0720740:CDS
ACATGAAAGAGCTTCTAGAA+AGG	0.506584	5_1:-16910805	Msa0720740:CDS
TTGAATTATTGATATTGAAG+AGG	0.507132	5_1:+16909863	None:intergenic
TCTTCCATACTTTCCTGTTG+TGG	0.509860	5_1:+16911441	None:intergenic
ACATGGAATACTTTATCCAC+TGG	0.522465	5_1:-16911678	Msa0720740:CDS
CAATCACTATTCAGGAATGC+AGG	0.523750	5_1:-16909966	Msa0720740:CDS
TTCAGGAATGCAGGTTATGG+TGG	0.533157	5_1:-16909957	Msa0720740:CDS
GATGATGCATCAGTTCCATA+AGG	0.540398	5_1:+16911528	None:intergenic
GTTAAAGCCAAATGAAGTAA+TGG	0.545862	5_1:-16910711	Msa0720740:CDS
AGAATCTTATGGCTGAAAGA+AGG	0.549094	5_1:-16911266	Msa0720740:CDS
TTATGGTGGGAGGTGTCTCT+AGG	0.550677	5_1:-16909943	Msa0720740:exon
TTGTTGGAAGTGAGAACAAG+AGG	0.557413	5_1:-16911410	Msa0720740:CDS
AGTTACTACTCCCTAATGGT+TGG	0.559379	5_1:-16911647	Msa0720740:CDS
TTATTCATAGTTCACAAAAG+TGG	0.563281	5_1:-16911771	Msa0720740:five_prime_UTR
CAAGAAGAAATGGAGGAAGA+AGG	0.564987	5_1:-16910770	Msa0720740:CDS
GTGAACACATTAGAAGCATT+AGG	0.568569	5_1:-16910500	Msa0720740:CDS
ACTGTTGACAGTAACAATCC+TGG	0.569200	5_1:+16910521	None:intergenic
GTTGAGAATGAAGCAAATGA+AGG	0.578645	5_1:+16911576	None:intergenic
TAAAATCAGCTGCAAAGTTG+AGG	0.582223	5_1:-16911376	Msa0720740:CDS
CCTGTATTTAACATACACTA+GGG	0.586177	5_1:-16909761	Msa0720740:three_prime_UTR
TCCTTTGTATCAAGTTGCAG+TGG	0.602054	5_1:-16909561	Msa0720740:three_prime_UTR
TTTCAGTTTGATGTTGAGAG+GGG	0.602477	5_1:-16910584	Msa0720740:intron
GCCACTGCAACTTGATACAA+AGG	0.603330	5_1:+16909560	None:intergenic
TAACACACTGGTGAATCTCA+AGG	0.606173	5_1:+16910477	None:intergenic
TCAGGAATGCAGGTTATGGT+GGG	0.610095	5_1:-16909956	Msa0720740:CDS
CCTAGTGTATGTTAAATACA+GGG	0.610870	5_1:+16909762	None:intergenic
TTGAGAATGAAGCAAATGAA+GGG	0.614806	5_1:+16911577	None:intergenic
AATGGTAAGAAATTCCCCTA+AGG	0.619045	5_1:-16910693	Msa0720740:intron
TGAAACTGCTTATAACACAC+TGG	0.622427	5_1:+16910465	None:intergenic
GGTGCTGAATCATCAAACTC+AGG	0.624297	5_1:+16911471	None:intergenic
AGGGACAATTGACCTAAGCA+TGG	0.627542	5_1:+16911215	None:intergenic
TAGTAACTCATTCAAACCAG+TGG	0.629735	5_1:+16911662	None:intergenic
AAACAGAAAAGTCTTAACAA+TGG	0.636764	5_1:+16911808	None:intergenic
GGAATGCAGGTTATGGTGGG+AGG	0.648346	5_1:-16909953	Msa0720740:CDS
TAGCTCCAAGAAAAGACACA+TGG	0.656108	5_1:-16911695	Msa0720740:CDS
ATTGCAAGCATCTTGCTCAG+AGG	0.660283	5_1:-16910432	Msa0720740:intron
AAAATCACTTTGAATCCACG+TGG	0.675006	5_1:+16909651	None:intergenic
GGAACTAAACCATACCTTAG+GGG	0.677566	5_1:+16910679	None:intergenic
ATGAAGTTGAACAAAATGGG+AGG	0.684237	5_1:+16911832	None:intergenic
AATTGTCCCTAAGATCAGCA+AGG	0.709185	5_1:-16911202	Msa0720740:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAATGTAAATTTTGTAAGA+TGG	-	chr5_1:16910557-16910576	Msa0720740:CDS	15.0%
!!	ATTACATTTATTCATAAACT+TGG	+	chr5_1:16910791-16910810	None:intergenic	15.0%
!!	TTATGAATAAATGTAATGAA+TGG	-	chr5_1:16910794-16910813	Msa0720740:CDS	15.0%
!!!	ATGCTTTAAAATTTCTTTTT+TGG	-	chr5_1:16911811-16911830	Msa0720740:five_prime_UTR	15.0%
!!!	TGCTTTAAAATTTCTTTTTT+GGG	-	chr5_1:16911812-16911831	Msa0720740:five_prime_UTR	15.0%
!!!	AAAATGTAAATTTTGTAAGA+TGG	-	chr5_1:16910557-16910576	Msa0720740:CDS	15.0%
!!	ATTACATTTATTCATAAACT+TGG	+	chr5_1:16910791-16910810	None:intergenic	15.0%
!!	TTATGAATAAATGTAATGAA+TGG	-	chr5_1:16910794-16910813	Msa0720740:CDS	15.0%
!!!	ATGCTTTAAAATTTCTTTTT+TGG	-	chr5_1:16911811-16911830	Msa0720740:five_prime_UTR	15.0%
!!!	TGCTTTAAAATTTCTTTTTT+GGG	-	chr5_1:16911812-16911831	Msa0720740:five_prime_UTR	15.0%
!!	CTGAACATAAATACATATAT+CGG	+	chr5_1:16910346-16910365	None:intergenic	20.0%
!!	AATTGAATGTAATAAATTCC+TGG	+	chr5_1:16911232-16911251	None:intergenic	20.0%
!!!	ACATTCAATTCAATTTTAGT+CGG	-	chr5_1:16911242-16911261	Msa0720740:CDS	20.0%
!!	TTGAATTATTGATATTGAAG+AGG	+	chr5_1:16911558-16911577	None:intergenic	20.0%
!!	TCTTCAATATCAATAATTCA+AGG	-	chr5_1:16911557-16911576	Msa0720740:CDS	20.0%
!!	CTGAACATAAATACATATAT+CGG	+	chr5_1:16910346-16910365	None:intergenic	20.0%
!!	AATTGAATGTAATAAATTCC+TGG	+	chr5_1:16911232-16911251	None:intergenic	20.0%
!!!	ACATTCAATTCAATTTTAGT+CGG	-	chr5_1:16911242-16911261	Msa0720740:CDS	20.0%
!!	TTGAATTATTGATATTGAAG+AGG	+	chr5_1:16911558-16911577	None:intergenic	20.0%
!!	TCTTCAATATCAATAATTCA+AGG	-	chr5_1:16911557-16911576	Msa0720740:CDS	20.0%
!	AAACAGAAAAGTCTTAACAA+TGG	+	chr5_1:16909613-16909632	None:intergenic	25.0%
!!	ATTGTTAAGACTTTTCTGTT+TGG	-	chr5_1:16909612-16909631	Msa0720740:three_prime_UTR	25.0%
!	TTATTCATAGTTCACAAAAG+TGG	-	chr5_1:16909647-16909666	Msa0720740:three_prime_UTR	25.0%
!	TATTCATAGTTCACAAAAGT+GGG	-	chr5_1:16909648-16909667	Msa0720740:three_prime_UTR	25.0%
!!	ATTTTCATCAAATGAGTCAA+AGG	+	chr5_1:16909798-16909817	None:intergenic	25.0%
!	TAGTAAGTTACAAGAAGAAA+TGG	-	chr5_1:16910638-16910657	Msa0720740:intron	25.0%
!!	ACAAATCAGATAAACCTTTT+AGG	-	chr5_1:16910672-16910691	Msa0720740:intron	25.0%
!!!	AAACCTTTTAGGAATTTCTA+AGG	-	chr5_1:16910683-16910702	Msa0720740:intron	25.0%
!	TTTCTTACCATTACTTCATT+TGG	+	chr5_1:16910717-16910736	None:intergenic	25.0%
!	AAATTGTATTACTGCATGTT+CGG	-	chr5_1:16911014-16911033	Msa0720740:intron	25.0%
!!!	CGTAGTTTTTAGTAAAATGA+CGG	+	chr5_1:16911075-16911094	None:intergenic	25.0%
!	ATAACTGATCATGAAAAGTT+TGG	-	chr5_1:16911114-16911133	Msa0720740:intron	25.0%
!!	TCTATAATTAATTTTTCGCC+AGG	-	chr5_1:16911211-16911230	Msa0720740:CDS	25.0%
!	ATTTGCAGATGATGAAAAAA+AGG	-	chr5_1:16911523-16911542	Msa0720740:CDS	25.0%
!	TAAACCAAAGCTAACTTATT+TGG	+	chr5_1:16911614-16911633	None:intergenic	25.0%
!	TTATCAATGCACTACTAAAA+AGG	+	chr5_1:16911726-16911745	None:intergenic	25.0%
!!!	TTTTAGTAGTGCATTGATAA+TGG	-	chr5_1:16911726-16911745	Msa0720740:CDS	25.0%
!!	TTTAAAGCATATGCATATTC+AGG	+	chr5_1:16911801-16911820	None:intergenic	25.0%
!!	GTGAATGACACAATTTTAAA+AGG	-	chr5_1:16911889-16911908	Msa0720740:five_prime_UTR	25.0%
!!!	ATGACACAATTTTAAAAGGT+TGG	-	chr5_1:16911893-16911912	Msa0720740:five_prime_UTR	25.0%
!	AAACAGAAAAGTCTTAACAA+TGG	+	chr5_1:16909613-16909632	None:intergenic	25.0%
!!	ATTGTTAAGACTTTTCTGTT+TGG	-	chr5_1:16909612-16909631	Msa0720740:three_prime_UTR	25.0%
!	TTATTCATAGTTCACAAAAG+TGG	-	chr5_1:16909647-16909666	Msa0720740:three_prime_UTR	25.0%
!	TATTCATAGTTCACAAAAGT+GGG	-	chr5_1:16909648-16909667	Msa0720740:three_prime_UTR	25.0%
!!	ATTTTCATCAAATGAGTCAA+AGG	+	chr5_1:16909798-16909817	None:intergenic	25.0%
!	TAGTAAGTTACAAGAAGAAA+TGG	-	chr5_1:16910638-16910657	Msa0720740:intron	25.0%
!!	ACAAATCAGATAAACCTTTT+AGG	-	chr5_1:16910672-16910691	Msa0720740:intron	25.0%
!!!	AAACCTTTTAGGAATTTCTA+AGG	-	chr5_1:16910683-16910702	Msa0720740:intron	25.0%
!	TTTCTTACCATTACTTCATT+TGG	+	chr5_1:16910717-16910736	None:intergenic	25.0%
!	AAATTGTATTACTGCATGTT+CGG	-	chr5_1:16911014-16911033	Msa0720740:intron	25.0%
!!!	CGTAGTTTTTAGTAAAATGA+CGG	+	chr5_1:16911075-16911094	None:intergenic	25.0%
!	ATAACTGATCATGAAAAGTT+TGG	-	chr5_1:16911114-16911133	Msa0720740:intron	25.0%
!!	TCTATAATTAATTTTTCGCC+AGG	-	chr5_1:16911211-16911230	Msa0720740:CDS	25.0%
!	ATTTGCAGATGATGAAAAAA+AGG	-	chr5_1:16911523-16911542	Msa0720740:CDS	25.0%
!	TAAACCAAAGCTAACTTATT+TGG	+	chr5_1:16911614-16911633	None:intergenic	25.0%
!	TTATCAATGCACTACTAAAA+AGG	+	chr5_1:16911726-16911745	None:intergenic	25.0%
!!!	TTTTAGTAGTGCATTGATAA+TGG	-	chr5_1:16911726-16911745	Msa0720740:CDS	25.0%
!!	TTTAAAGCATATGCATATTC+AGG	+	chr5_1:16911801-16911820	None:intergenic	25.0%
!!	GTGAATGACACAATTTTAAA+AGG	-	chr5_1:16911889-16911908	Msa0720740:five_prime_UTR	25.0%
	GGAATGAAGTTGAACAAAAT+GGG	+	chr5_1:16909592-16909611	None:intergenic	30.0%
	TGGAATGAAGTTGAACAAAA+TGG	+	chr5_1:16909593-16909612	None:intergenic	30.0%
	TGGGAAAAGAGAAAGAAAAA+TGG	-	chr5_1:16909667-16909686	Msa0720740:three_prime_UTR	30.0%
	AAAATGGAACTTTCTCAACT+TGG	-	chr5_1:16909683-16909702	Msa0720740:three_prime_UTR	30.0%
	TTGAGAATGAAGCAAATGAA+GGG	+	chr5_1:16909844-16909863	None:intergenic	30.0%
	CATTCAAATCTATGGTCTAA+TGG	+	chr5_1:16909869-16909888	None:intergenic	30.0%
	CATAAGGACATTCAAATCTA+TGG	+	chr5_1:16909877-16909896	None:intergenic	30.0%
	CATAGATTTGAATGTCCTTA+TGG	-	chr5_1:16909875-16909894	Msa0720740:three_prime_UTR	30.0%
	TTATCATACCCTTATCTTGA+TGG	-	chr5_1:16909914-16909933	Msa0720740:three_prime_UTR	30.0%
!	TGAAACTCCAGTTTTTAACA+TGG	-	chr5_1:16910075-16910094	Msa0720740:intron	30.0%
!	GAAACTCCAGTTTTTAACAT+GGG	-	chr5_1:16910076-16910095	Msa0720740:intron	30.0%
	AGAAAAAAGCCAAATCCAAA+AGG	-	chr5_1:16910110-16910129	Msa0720740:intron	30.0%
	GAAAAAAGCCAAATCCAAAA+GGG	-	chr5_1:16910111-16910130	Msa0720740:intron	30.0%
!	CATAGTGTGTGTTCTAATTT+TGG	-	chr5_1:16910435-16910454	Msa0720740:CDS	30.0%
!	GTAAATTTTGTAAGATGGAC+AGG	-	chr5_1:16910562-16910581	Msa0720740:CDS	30.0%
	TAAGTTACAAGAAGAAATGG+AGG	-	chr5_1:16910641-16910660	Msa0720740:intron	30.0%
	ACTCCTTAGAAATTCCTAAA+AGG	+	chr5_1:16910689-16910708	None:intergenic	30.0%
	GTTAAAGCCAAATGAAGTAA+TGG	-	chr5_1:16910707-16910726	Msa0720740:CDS	30.0%
	GATTATGCATTAAGTGTTCA+AGG	+	chr5_1:16910763-16910782	None:intergenic	30.0%
!!	TTTTTCAGTTTGATGTTGAG+AGG	-	chr5_1:16910832-16910851	Msa0720740:CDS	30.0%
!	TTTTCAGTTTGATGTTGAGA+GGG	-	chr5_1:16910833-16910852	Msa0720740:CDS	30.0%
	TTATAACCCTTAAAGCTCAA+AGG	+	chr5_1:16911098-16911117	None:intergenic	30.0%
!!!	TAGTCTTTTTTTTGGTTCTG+CGG	+	chr5_1:16911312-16911331	None:intergenic	30.0%
	AACCATGCAAACAATTATTG+AGG	+	chr5_1:16911339-16911358	None:intergenic	30.0%
	CATATTATTCCCATGTGTTT+AGG	-	chr5_1:16911388-16911407	Msa0720740:CDS	30.0%
	AGATAAAGCAATCACTATTC+AGG	-	chr5_1:16911444-16911463	Msa0720740:CDS	30.0%
!	GATTCCAAATAAGTTAGCTT+TGG	-	chr5_1:16911607-16911626	Msa0720740:CDS	30.0%
	CCTAGTGTATGTTAAATACA+GGG	+	chr5_1:16911659-16911678	None:intergenic	30.0%
	CCTGTATTTAACATACACTA+GGG	-	chr5_1:16911657-16911676	Msa0720740:CDS	30.0%
!	AGGTGGAATTTTATCACAAT+GGG	+	chr5_1:16911706-16911725	None:intergenic	30.0%
!	AAGGTGGAATTTTATCACAA+TGG	+	chr5_1:16911707-16911726	None:intergenic	30.0%
	GGAATGAAGTTGAACAAAAT+GGG	+	chr5_1:16909592-16909611	None:intergenic	30.0%
	TGGAATGAAGTTGAACAAAA+TGG	+	chr5_1:16909593-16909612	None:intergenic	30.0%
	TGGGAAAAGAGAAAGAAAAA+TGG	-	chr5_1:16909667-16909686	Msa0720740:three_prime_UTR	30.0%
	AAAATGGAACTTTCTCAACT+TGG	-	chr5_1:16909683-16909702	Msa0720740:three_prime_UTR	30.0%
	TTGAGAATGAAGCAAATGAA+GGG	+	chr5_1:16909844-16909863	None:intergenic	30.0%
	CATTCAAATCTATGGTCTAA+TGG	+	chr5_1:16909869-16909888	None:intergenic	30.0%
	CATAAGGACATTCAAATCTA+TGG	+	chr5_1:16909877-16909896	None:intergenic	30.0%
	CATAGATTTGAATGTCCTTA+TGG	-	chr5_1:16909875-16909894	Msa0720740:three_prime_UTR	30.0%
	TTATCATACCCTTATCTTGA+TGG	-	chr5_1:16909914-16909933	Msa0720740:three_prime_UTR	30.0%
!	TGAAACTCCAGTTTTTAACA+TGG	-	chr5_1:16910075-16910094	Msa0720740:intron	30.0%
!	GAAACTCCAGTTTTTAACAT+GGG	-	chr5_1:16910076-16910095	Msa0720740:intron	30.0%
	AGAAAAAAGCCAAATCCAAA+AGG	-	chr5_1:16910110-16910129	Msa0720740:intron	30.0%
	GAAAAAAGCCAAATCCAAAA+GGG	-	chr5_1:16910111-16910130	Msa0720740:intron	30.0%
!	CATAGTGTGTGTTCTAATTT+TGG	-	chr5_1:16910435-16910454	Msa0720740:CDS	30.0%
!	GTAAATTTTGTAAGATGGAC+AGG	-	chr5_1:16910562-16910581	Msa0720740:CDS	30.0%
	TAAGTTACAAGAAGAAATGG+AGG	-	chr5_1:16910641-16910660	Msa0720740:intron	30.0%
	ACTCCTTAGAAATTCCTAAA+AGG	+	chr5_1:16910689-16910708	None:intergenic	30.0%
	GTTAAAGCCAAATGAAGTAA+TGG	-	chr5_1:16910707-16910726	Msa0720740:CDS	30.0%
	GATTATGCATTAAGTGTTCA+AGG	+	chr5_1:16910763-16910782	None:intergenic	30.0%
!!	TTTTTCAGTTTGATGTTGAG+AGG	-	chr5_1:16910832-16910851	Msa0720740:CDS	30.0%
!	TTTTCAGTTTGATGTTGAGA+GGG	-	chr5_1:16910833-16910852	Msa0720740:CDS	30.0%
	TTATAACCCTTAAAGCTCAA+AGG	+	chr5_1:16911098-16911117	None:intergenic	30.0%
!!!	TAGTCTTTTTTTTGGTTCTG+CGG	+	chr5_1:16911312-16911331	None:intergenic	30.0%
	AACCATGCAAACAATTATTG+AGG	+	chr5_1:16911339-16911358	None:intergenic	30.0%
	CATATTATTCCCATGTGTTT+AGG	-	chr5_1:16911388-16911407	Msa0720740:CDS	30.0%
	AGATAAAGCAATCACTATTC+AGG	-	chr5_1:16911444-16911463	Msa0720740:CDS	30.0%
!	GATTCCAAATAAGTTAGCTT+TGG	-	chr5_1:16911607-16911626	Msa0720740:CDS	30.0%
	CCTAGTGTATGTTAAATACA+GGG	+	chr5_1:16911659-16911678	None:intergenic	30.0%
	CCTGTATTTAACATACACTA+GGG	-	chr5_1:16911657-16911676	Msa0720740:CDS	30.0%
!	AGGTGGAATTTTATCACAAT+GGG	+	chr5_1:16911706-16911725	None:intergenic	30.0%
!	AAGGTGGAATTTTATCACAA+TGG	+	chr5_1:16911707-16911726	None:intergenic	30.0%
	ATGAAGTTGAACAAAATGGG+AGG	+	chr5_1:16909589-16909608	None:intergenic	35.0%
!!	TTCTCAACTTGGTTTTCTTG+AGG	-	chr5_1:16909694-16909713	Msa0720740:three_prime_UTR	35.0%
!	GTATTCCATGTGTCTTTTCT+TGG	+	chr5_1:16909731-16909750	None:intergenic	35.0%
	ACATGGAATACTTTATCCAC+TGG	-	chr5_1:16909740-16909759	Msa0720740:three_prime_UTR	35.0%
	TAGTAACTCATTCAAACCAG+TGG	+	chr5_1:16909759-16909778	None:intergenic	35.0%
	AATGAGTTACTACTCCCTAA+TGG	-	chr5_1:16909767-16909786	Msa0720740:three_prime_UTR	35.0%
	GCAAATGAAGGGTTTAAAGA+TGG	+	chr5_1:16909833-16909852	None:intergenic	35.0%
	GTTGAGAATGAAGCAAATGA+AGG	+	chr5_1:16909845-16909864	None:intergenic	35.0%
	CTGAGAATCCATCAAGATAA+GGG	+	chr5_1:16909925-16909944	None:intergenic	35.0%
	ACTGAGAATCCATCAAGATA+AGG	+	chr5_1:16909926-16909945	None:intergenic	35.0%
	TTTACCACAACAGGAAAGTA+TGG	-	chr5_1:16909973-16909992	Msa0720740:CDS	35.0%
!!!	ATGGAAGAGTTTGGTTTTGT+TGG	-	chr5_1:16909992-16910011	Msa0720740:CDS	35.0%
	TAAAATCAGCTGCAAAGTTG+AGG	-	chr5_1:16910042-16910061	Msa0720740:intron	35.0%
	ACAGCCTTCAAAGAATCTTA+TGG	-	chr5_1:16910141-16910160	Msa0720740:intron	35.0%
	TCAGCCATAAGATTCTTTGA+AGG	+	chr5_1:16910148-16910167	None:intergenic	35.0%
	AGAATCTTATGGCTGAAAGA+AGG	-	chr5_1:16910152-16910171	Msa0720740:intron	35.0%
!	CATTGACTAGCACTTGTATT+TGG	-	chr5_1:16910497-16910516	Msa0720740:CDS	35.0%
!	ACATGAAAGAGCTTCTAGAA+AGG	-	chr5_1:16910613-16910632	Msa0720740:intron	35.0%
	AATGGTAAGAAATTCCCCTA+AGG	-	chr5_1:16910725-16910744	Msa0720740:CDS	35.0%
	TAAGAAATTCCCCTAAGGTA+TGG	-	chr5_1:16910730-16910749	Msa0720740:CDS	35.0%
	AGGAACTAAACCATACCTTA+GGG	+	chr5_1:16910743-16910762	None:intergenic	35.0%
	AAGGAACTAAACCATACCTT+AGG	+	chr5_1:16910744-16910763	None:intergenic	35.0%
	TTTCAGTTTGATGTTGAGAG+GGG	-	chr5_1:16910834-16910853	Msa0720740:CDS	35.0%
!!	GTGAACACATTAGAAGCATT+AGG	-	chr5_1:16910918-16910937	Msa0720740:intron	35.0%
	TGAAACTGCTTATAACACAC+TGG	+	chr5_1:16910956-16910975	None:intergenic	35.0%
!!!	GAGGCGAATAGTCTTTTTTT+TGG	+	chr5_1:16911320-16911339	None:intergenic	35.0%
	GTGATTGCTTTATCTCTTCA+GGG	+	chr5_1:16911439-16911458	None:intergenic	35.0%
	AGTGATTGCTTTATCTCTTC+AGG	+	chr5_1:16911440-16911459	None:intergenic	35.0%
!	AGGTGTCTCTAGGAAAATAA+TGG	-	chr5_1:16911485-16911504	Msa0720740:CDS	35.0%
!	CTAGGAAAATAATGGAAAGC+TGG	-	chr5_1:16911493-16911512	Msa0720740:CDS	35.0%
	CCCTGTATTTAACATACACT+AGG	-	chr5_1:16911656-16911675	Msa0720740:CDS	35.0%
	CCCTAGTGTATGTTAAATAC+AGG	+	chr5_1:16911660-16911679	None:intergenic	35.0%
	TCAATGCACTACTAAAAAGG+TGG	+	chr5_1:16911723-16911742	None:intergenic	35.0%
!	TTTGAATCCACGTGGATTTT+TGG	+	chr5_1:16911762-16911781	None:intergenic	35.0%
	AAAATCACTTTGAATCCACG+TGG	+	chr5_1:16911770-16911789	None:intergenic	35.0%
	ATGAAGTTGAACAAAATGGG+AGG	+	chr5_1:16909589-16909608	None:intergenic	35.0%
!!	TTCTCAACTTGGTTTTCTTG+AGG	-	chr5_1:16909694-16909713	Msa0720740:three_prime_UTR	35.0%
!	GTATTCCATGTGTCTTTTCT+TGG	+	chr5_1:16909731-16909750	None:intergenic	35.0%
	ACATGGAATACTTTATCCAC+TGG	-	chr5_1:16909740-16909759	Msa0720740:three_prime_UTR	35.0%
	TAGTAACTCATTCAAACCAG+TGG	+	chr5_1:16909759-16909778	None:intergenic	35.0%
	AATGAGTTACTACTCCCTAA+TGG	-	chr5_1:16909767-16909786	Msa0720740:three_prime_UTR	35.0%
	GCAAATGAAGGGTTTAAAGA+TGG	+	chr5_1:16909833-16909852	None:intergenic	35.0%
	GTTGAGAATGAAGCAAATGA+AGG	+	chr5_1:16909845-16909864	None:intergenic	35.0%
	CTGAGAATCCATCAAGATAA+GGG	+	chr5_1:16909925-16909944	None:intergenic	35.0%
	ACTGAGAATCCATCAAGATA+AGG	+	chr5_1:16909926-16909945	None:intergenic	35.0%
	TTTACCACAACAGGAAAGTA+TGG	-	chr5_1:16909973-16909992	Msa0720740:CDS	35.0%
!!!	ATGGAAGAGTTTGGTTTTGT+TGG	-	chr5_1:16909992-16910011	Msa0720740:CDS	35.0%
	TAAAATCAGCTGCAAAGTTG+AGG	-	chr5_1:16910042-16910061	Msa0720740:intron	35.0%
	ACAGCCTTCAAAGAATCTTA+TGG	-	chr5_1:16910141-16910160	Msa0720740:intron	35.0%
	TCAGCCATAAGATTCTTTGA+AGG	+	chr5_1:16910148-16910167	None:intergenic	35.0%
	AGAATCTTATGGCTGAAAGA+AGG	-	chr5_1:16910152-16910171	Msa0720740:intron	35.0%
!	CATTGACTAGCACTTGTATT+TGG	-	chr5_1:16910497-16910516	Msa0720740:CDS	35.0%
!	ACATGAAAGAGCTTCTAGAA+AGG	-	chr5_1:16910613-16910632	Msa0720740:intron	35.0%
	AATGGTAAGAAATTCCCCTA+AGG	-	chr5_1:16910725-16910744	Msa0720740:CDS	35.0%
	TAAGAAATTCCCCTAAGGTA+TGG	-	chr5_1:16910730-16910749	Msa0720740:CDS	35.0%
	AGGAACTAAACCATACCTTA+GGG	+	chr5_1:16910743-16910762	None:intergenic	35.0%
	AAGGAACTAAACCATACCTT+AGG	+	chr5_1:16910744-16910763	None:intergenic	35.0%
	TTTCAGTTTGATGTTGAGAG+GGG	-	chr5_1:16910834-16910853	Msa0720740:CDS	35.0%
!!	GTGAACACATTAGAAGCATT+AGG	-	chr5_1:16910918-16910937	Msa0720740:intron	35.0%
	TGAAACTGCTTATAACACAC+TGG	+	chr5_1:16910956-16910975	None:intergenic	35.0%
!!!	GAGGCGAATAGTCTTTTTTT+TGG	+	chr5_1:16911320-16911339	None:intergenic	35.0%
	GTGATTGCTTTATCTCTTCA+GGG	+	chr5_1:16911439-16911458	None:intergenic	35.0%
	AGTGATTGCTTTATCTCTTC+AGG	+	chr5_1:16911440-16911459	None:intergenic	35.0%
!	AGGTGTCTCTAGGAAAATAA+TGG	-	chr5_1:16911485-16911504	Msa0720740:CDS	35.0%
!	CTAGGAAAATAATGGAAAGC+TGG	-	chr5_1:16911493-16911512	Msa0720740:CDS	35.0%
	CCCTGTATTTAACATACACT+AGG	-	chr5_1:16911656-16911675	Msa0720740:CDS	35.0%
	CCCTAGTGTATGTTAAATAC+AGG	+	chr5_1:16911660-16911679	None:intergenic	35.0%
	TCAATGCACTACTAAAAAGG+TGG	+	chr5_1:16911723-16911742	None:intergenic	35.0%
!	TTTGAATCCACGTGGATTTT+TGG	+	chr5_1:16911762-16911781	None:intergenic	35.0%
	AAAATCACTTTGAATCCACG+TGG	+	chr5_1:16911770-16911789	None:intergenic	35.0%
!!	AATGGGAGGAGTTTCAAGTT+TGG	+	chr5_1:16909575-16909594	None:intergenic	40.0%
	TAGCTCCAAGAAAAGACACA+TGG	-	chr5_1:16909723-16909742	Msa0720740:three_prime_UTR	40.0%
	AGTTACTACTCCCTAATGGT+TGG	-	chr5_1:16909771-16909790	Msa0720740:three_prime_UTR	40.0%
	AGTCAAAGGTCCAACCATTA+GGG	+	chr5_1:16909784-16909803	None:intergenic	40.0%
	GATGATGCATCAGTTCCATA+AGG	+	chr5_1:16909893-16909912	None:intergenic	40.0%
	CTTTCCTGTTGTGGTAAAAC+TGG	+	chr5_1:16909971-16909990	None:intergenic	40.0%
	TCTTCCATACTTTCCTGTTG+TGG	+	chr5_1:16909980-16909999	None:intergenic	40.0%
!	CAGGAAAGTATGGAAGAGTT+TGG	-	chr5_1:16909983-16910002	Msa0720740:CDS	40.0%
	TTGTTGGAAGTGAGAACAAG+AGG	-	chr5_1:16910008-16910027	Msa0720740:CDS	40.0%
	CACAGACCCATGTTAAAAAC+TGG	+	chr5_1:16910085-16910104	None:intergenic	40.0%
!	GTTTTTAACATGGGTCTGTG+TGG	-	chr5_1:16910085-16910104	Msa0720740:intron	40.0%
!	TCCTTCAACCCTTTTGGATT+TGG	+	chr5_1:16910122-16910141	None:intergenic	40.0%
!!	GAAGAAAGCGTTTGAATGAC+AGG	-	chr5_1:16910176-16910195	Msa0720740:intron	40.0%
	AATTGTCCCTAAGATCAGCA+AGG	-	chr5_1:16910216-16910235	Msa0720740:intron	40.0%
	GAATCACCTTGCTGATCTTA+GGG	+	chr5_1:16910225-16910244	None:intergenic	40.0%
	TGAATCACCTTGCTGATCTT+AGG	+	chr5_1:16910226-16910245	None:intergenic	40.0%
	ATGGACAGGACATCAATTCT+AGG	-	chr5_1:16910576-16910595	Msa0720740:CDS	40.0%
	CAAGAAGAAATGGAGGAAGA+AGG	-	chr5_1:16910648-16910667	Msa0720740:intron	40.0%
	GGAACTAAACCATACCTTAG+GGG	+	chr5_1:16910742-16910761	None:intergenic	40.0%
	ACTGTTGACAGTAACAATCC+TGG	+	chr5_1:16910900-16910919	None:intergenic	40.0%
	TAACACACTGGTGAATCTCA+AGG	+	chr5_1:16910944-16910963	None:intergenic	40.0%
!!	GTTCGGATTGATAGCGAATT+TGG	-	chr5_1:16911031-16911050	Msa0720740:intron	40.0%
	AACTACGCCTTTGAGCTTTA+AGG	-	chr5_1:16911088-16911107	Msa0720740:intron	40.0%
!	ACTACGCCTTTGAGCTTTAA+GGG	-	chr5_1:16911089-16911108	Msa0720740:intron	40.0%
	CGCCTCAATAATTGTTTGCA+TGG	-	chr5_1:16911334-16911353	Msa0720740:CDS	40.0%
	TTCCCATGTGTTTAGGTAGA+TGG	-	chr5_1:16911395-16911414	Msa0720740:CDS	40.0%
	GACCATCTACCTAAACACAT+GGG	+	chr5_1:16911400-16911419	None:intergenic	40.0%
	TGACCATCTACCTAAACACA+TGG	+	chr5_1:16911401-16911420	None:intergenic	40.0%
	CAATCACTATTCAGGAATGC+AGG	-	chr5_1:16911452-16911471	Msa0720740:CDS	40.0%
	CTATTCAGGAATGCAGGTTA+TGG	-	chr5_1:16911458-16911477	Msa0720740:CDS	40.0%
!	TCCTTTGTATCAAGTTGCAG+TGG	-	chr5_1:16911857-16911876	Msa0720740:five_prime_UTR	40.0%
!!	AATGGGAGGAGTTTCAAGTT+TGG	+	chr5_1:16909575-16909594	None:intergenic	40.0%
	TAGCTCCAAGAAAAGACACA+TGG	-	chr5_1:16909723-16909742	Msa0720740:three_prime_UTR	40.0%
	AGTTACTACTCCCTAATGGT+TGG	-	chr5_1:16909771-16909790	Msa0720740:three_prime_UTR	40.0%
	AGTCAAAGGTCCAACCATTA+GGG	+	chr5_1:16909784-16909803	None:intergenic	40.0%
	GATGATGCATCAGTTCCATA+AGG	+	chr5_1:16909893-16909912	None:intergenic	40.0%
	CTTTCCTGTTGTGGTAAAAC+TGG	+	chr5_1:16909971-16909990	None:intergenic	40.0%
	TCTTCCATACTTTCCTGTTG+TGG	+	chr5_1:16909980-16909999	None:intergenic	40.0%
!	CAGGAAAGTATGGAAGAGTT+TGG	-	chr5_1:16909983-16910002	Msa0720740:CDS	40.0%
	TTGTTGGAAGTGAGAACAAG+AGG	-	chr5_1:16910008-16910027	Msa0720740:CDS	40.0%
	CACAGACCCATGTTAAAAAC+TGG	+	chr5_1:16910085-16910104	None:intergenic	40.0%
!	GTTTTTAACATGGGTCTGTG+TGG	-	chr5_1:16910085-16910104	Msa0720740:intron	40.0%
!	TCCTTCAACCCTTTTGGATT+TGG	+	chr5_1:16910122-16910141	None:intergenic	40.0%
!!	GAAGAAAGCGTTTGAATGAC+AGG	-	chr5_1:16910176-16910195	Msa0720740:intron	40.0%
	AATTGTCCCTAAGATCAGCA+AGG	-	chr5_1:16910216-16910235	Msa0720740:intron	40.0%
	GAATCACCTTGCTGATCTTA+GGG	+	chr5_1:16910225-16910244	None:intergenic	40.0%
	TGAATCACCTTGCTGATCTT+AGG	+	chr5_1:16910226-16910245	None:intergenic	40.0%
	ATGGACAGGACATCAATTCT+AGG	-	chr5_1:16910576-16910595	Msa0720740:CDS	40.0%
	CAAGAAGAAATGGAGGAAGA+AGG	-	chr5_1:16910648-16910667	Msa0720740:intron	40.0%
	GGAACTAAACCATACCTTAG+GGG	+	chr5_1:16910742-16910761	None:intergenic	40.0%
	ACTGTTGACAGTAACAATCC+TGG	+	chr5_1:16910900-16910919	None:intergenic	40.0%
	TAACACACTGGTGAATCTCA+AGG	+	chr5_1:16910944-16910963	None:intergenic	40.0%
!!	GTTCGGATTGATAGCGAATT+TGG	-	chr5_1:16911031-16911050	Msa0720740:intron	40.0%
	AACTACGCCTTTGAGCTTTA+AGG	-	chr5_1:16911088-16911107	Msa0720740:intron	40.0%
!	ACTACGCCTTTGAGCTTTAA+GGG	-	chr5_1:16911089-16911108	Msa0720740:intron	40.0%
	CGCCTCAATAATTGTTTGCA+TGG	-	chr5_1:16911334-16911353	Msa0720740:CDS	40.0%
	TTCCCATGTGTTTAGGTAGA+TGG	-	chr5_1:16911395-16911414	Msa0720740:CDS	40.0%
	GACCATCTACCTAAACACAT+GGG	+	chr5_1:16911400-16911419	None:intergenic	40.0%
	TGACCATCTACCTAAACACA+TGG	+	chr5_1:16911401-16911420	None:intergenic	40.0%
	CAATCACTATTCAGGAATGC+AGG	-	chr5_1:16911452-16911471	Msa0720740:CDS	40.0%
	CTATTCAGGAATGCAGGTTA+TGG	-	chr5_1:16911458-16911477	Msa0720740:CDS	40.0%
!	TCCTTTGTATCAAGTTGCAG+TGG	-	chr5_1:16911857-16911876	Msa0720740:five_prime_UTR	40.0%
	GAGTCAAAGGTCCAACCATT+AGG	+	chr5_1:16909785-16909804	None:intergenic	45.0%
!	GGTGCTGAATCATCAAACTC+AGG	+	chr5_1:16909950-16909969	None:intergenic	45.0%
!	AGCACCAGTTTTACCACAAC+AGG	-	chr5_1:16909964-16909983	Msa0720740:CDS	45.0%
	GCCAAATCCAAAAGGGTTGA+AGG	-	chr5_1:16910118-16910137	Msa0720740:intron	45.0%
	ATGACAGGCTTTCCATGCTT+AGG	-	chr5_1:16910191-16910210	Msa0720740:intron	45.0%
	AGGGACAATTGACCTAAGCA+TGG	+	chr5_1:16910206-16910225	None:intergenic	45.0%
	TCGAGTATCAGTGTTGTGTC+TGG	-	chr5_1:16910396-16910415	Msa0720740:intron	45.0%
!!	AGATGCTGATTCTTGTGTCC+TGG	+	chr5_1:16910863-16910882	None:intergenic	45.0%
!!	CAGTAACAATCCTGGCTTTG+TGG	+	chr5_1:16910892-16910911	None:intergenic	45.0%
	ATTGCAAGCATCTTGCTCAG+AGG	-	chr5_1:16910986-16911005	Msa0720740:intron	45.0%
	TTCAGGAATGCAGGTTATGG+TGG	-	chr5_1:16911461-16911480	Msa0720740:CDS	45.0%
	TCAGGAATGCAGGTTATGGT+GGG	-	chr5_1:16911462-16911481	Msa0720740:CDS	45.0%
	GTTGTTGCCAAAAATCCACG+TGG	-	chr5_1:16911752-16911771	Msa0720740:exon	45.0%
	GCCACTGCAACTTGATACAA+AGG	+	chr5_1:16911861-16911880	None:intergenic	45.0%
	GAGTCAAAGGTCCAACCATT+AGG	+	chr5_1:16909785-16909804	None:intergenic	45.0%
!	GGTGCTGAATCATCAAACTC+AGG	+	chr5_1:16909950-16909969	None:intergenic	45.0%
!	AGCACCAGTTTTACCACAAC+AGG	-	chr5_1:16909964-16909983	Msa0720740:CDS	45.0%
	GCCAAATCCAAAAGGGTTGA+AGG	-	chr5_1:16910118-16910137	Msa0720740:intron	45.0%
	ATGACAGGCTTTCCATGCTT+AGG	-	chr5_1:16910191-16910210	Msa0720740:intron	45.0%
	AGGGACAATTGACCTAAGCA+TGG	+	chr5_1:16910206-16910225	None:intergenic	45.0%
	TCGAGTATCAGTGTTGTGTC+TGG	-	chr5_1:16910396-16910415	Msa0720740:intron	45.0%
!!	AGATGCTGATTCTTGTGTCC+TGG	+	chr5_1:16910863-16910882	None:intergenic	45.0%
!!	CAGTAACAATCCTGGCTTTG+TGG	+	chr5_1:16910892-16910911	None:intergenic	45.0%
	ATTGCAAGCATCTTGCTCAG+AGG	-	chr5_1:16910986-16911005	Msa0720740:intron	45.0%
	TTCAGGAATGCAGGTTATGG+TGG	-	chr5_1:16911461-16911480	Msa0720740:CDS	45.0%
	TCAGGAATGCAGGTTATGGT+GGG	-	chr5_1:16911462-16911481	Msa0720740:CDS	45.0%
	GTTGTTGCCAAAAATCCACG+TGG	-	chr5_1:16911752-16911771	Msa0720740:exon	45.0%
	GCCACTGCAACTTGATACAA+AGG	+	chr5_1:16911861-16911880	None:intergenic	45.0%
!	AGGCTGTCCTTCAACCCTTT+TGG	+	chr5_1:16910128-16910147	None:intergenic	50.0%
!!	TTATGGTGGGAGGTGTCTCT+AGG	-	chr5_1:16911475-16911494	Msa0720740:CDS	50.0%
!	AGGCTGTCCTTCAACCCTTT+TGG	+	chr5_1:16910128-16910147	None:intergenic	50.0%
!!	TTATGGTGGGAGGTGTCTCT+AGG	-	chr5_1:16911475-16911494	Msa0720740:CDS	50.0%
	TGATGTTGAGAGGGGAGACC+AGG	-	chr5_1:16910842-16910861	Msa0720740:CDS	55.0%
	ATCTGCTGTGCCACAAAGCC+AGG	-	chr5_1:16910879-16910898	Msa0720740:intron	55.0%
!	GGAATGCAGGTTATGGTGGG+AGG	-	chr5_1:16911465-16911484	Msa0720740:CDS	55.0%
	TGATGTTGAGAGGGGAGACC+AGG	-	chr5_1:16910842-16910861	Msa0720740:CDS	55.0%
	ATCTGCTGTGCCACAAAGCC+AGG	-	chr5_1:16910879-16910898	Msa0720740:intron	55.0%
!	GGAATGCAGGTTATGGTGGG+AGG	-	chr5_1:16911465-16911484	Msa0720740:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_1	gene	16909525	16911915	16909525	ID=Msa0720740;Name=Msa0720740
chr5_1	mRNA	16909525	16911915	16909525	ID=Msa0720740-mRNA-1;Parent=Msa0720740;Name=Msa0720740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=161\|1\|1\|1\|1\|1\|4\|419\|325
chr5_1	exon	16909525	16910030	16909525	ID=Msa0720740-mRNA-1:exon:6450;Parent=Msa0720740-mRNA-1
chr5_1	exon	16910433	16910600	16910433	ID=Msa0720740-mRNA-1:exon:6449;Parent=Msa0720740-mRNA-1
chr5_1	exon	16910694	16910864	16910694	ID=Msa0720740-mRNA-1:exon:6448;Parent=Msa0720740-mRNA-1
chr5_1	exon	16911203	16911915	16911203	ID=Msa0720740-mRNA-1:exon:6447;Parent=Msa0720740-mRNA-1
chr5_1	five_prime_UTR	16911755	16911915	16911755	ID=Msa0720740-mRNA-1:five_prime_utr;Parent=Msa0720740-mRNA-1
chr5_1	CDS	16911203	16911754	16911203	ID=Msa0720740-mRNA-1:cds;Parent=Msa0720740-mRNA-1
chr5_1	CDS	16910694	16910864	16910694	ID=Msa0720740-mRNA-1:cds;Parent=Msa0720740-mRNA-1
chr5_1	CDS	16910433	16910600	16910433	ID=Msa0720740-mRNA-1:cds;Parent=Msa0720740-mRNA-1
chr5_1	CDS	16909944	16910030	16909944	ID=Msa0720740-mRNA-1:cds;Parent=Msa0720740-mRNA-1
chr5_1	three_prime_UTR	16909525	16909943	16909525	ID=Msa0720740-mRNA-1:three_prime_utr;Parent=Msa0720740-mRNA-1

Gene Sequence

>Msa0720740

ATGGAACTTTCTCAACTTGGTTTTCTTGAGGAGCTACTAGCTCCAAGAAAAGACACATGGAATACTTTATCCACTGGTTTGAATGAGTTACTACTCCCTAATGGTTGGACCTTTGACTCATTTGATGAAAATCTTCTCATCAATCCATCTTTAAACCCTTCATTTGCTTCATTCTCAACACCATTAGACCATAGATTTGAATGTCCTTATGGAACTGATGCATCATCATTATCATACCCTTATCTTGATGGATTCTCAGTTCCTGAGTTTGATGATTCAGCACCAGTTTTACCACAACAGGAAAGTATGGAAGAGTTTGGTTTTGTTGGAAGTGAGAACAAGAGGTTTCAAGAGAGTAAAATCAGCTGCAAAGTTGAGGAACAAGTTAGTGAAACTCCAGTTTTTAACATGGGTCTGTGTGGTGAGAAAAAAGCCAAATCCAAAAGGGTTGAAGGACAGCCTTCAAAGAATCTTATGGCTGAAAGAAGGAGAAGAAAGCGTTTGAATGACAGGCTTTCCATGCTTAGGTCAATTGTCCCTAAGATCAGCAAGATGGACAGGACATCAATTCTAGGAGATACAATTGATTACATGAAAGAGCTTCTAGAAAGGATTAGTAAGTTACAAGAAGAAATGGAGGAAGAAGGAACAAATCAGATAAACCTTTTAGGAATTTCTAAGGAGTTAAAGCCAAATGAAGTAATGGTAAGAAATTCCCCTAAGTTTGATGTTGAGAGGGGAGACCAGGACACAAGAATCAGCATCTGCTGTGCCACAAAGCCAGGATTGTTACTGTCAACAGTGAACACATTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGTTTCAATGATTTTTCATTGCAAGCATCTTGCTCAGAGGTAGATGGTCAGAGAAATTGTATGAACCCTGAAGAGATAAAGCAATCACTATTCAGGAATGCAGGTTATGGTGGGAGGTGTCTCTAG

Protein sequence

>Msa0720740

MELSQLGFLEELLAPRKDTWNTLSTGLNELLLPNGWTFDSFDENLLINPSLNPSFASFSTPLDHRFECPYGTDASSLSYPYLDGFSVPEFDDSAPVLPQQESMEEFGFVGSENKRFQESKISCKVEEQVSETPVFNMGLCGEKKAKSKRVEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERISKLQEEMEEEGTNQINLLGISKELKPNEVMVRNSPKFDVERGDQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSLQASCSEVDGQRNCMNPEEIKQSLFRNAGYGGRCL*