AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297690 MtrunA17_Chr4g0054811 98.205 780 13 1 1 780 1 779 0.0 1569
Msa1297690 MtrunA17_Chr1g0193691 57.183 355 129 6 434 777 550 892 5.44e-118 377
Msa1297690 MtrunA17_Chr1g0193691 38.974 390 143 17 1 327 1 358 2.34e-54 202
Msa1297690 MtrunA17_Chr4g0031521 51.397 358 134 6 423 775 380 702 8.61e-109 348
Msa1297690 MtrunA17_Chr4g0031521 36.188 362 145 12 1 317 1 321 7.61e-46 175
Msa1297690 MtrunA17_Chr7g0238501 50.167 299 94 2 477 775 310 553 6.71e-93 301
Msa1297690 MtrunA17_Chr7g0238501 56.364 55 24 0 258 312 238 292 5.02e-16 82.0
Msa1297690 MtrunA17_Chr4g0039061 48.495 299 101 3 478 776 245 490 3.20e-85 279
Msa1297690 MtrunA17_Chr4g0039061 39.831 118 58 3 215 320 123 239 3.91e-19 91.7
Msa1297690 MtrunA17_Chr2g0295991 40.690 290 125 3 479 768 234 476 9.47e-60 210
Msa1297690 MtrunA17_Chr2g0295991 52.459 61 29 0 257 317 140 200 5.90e-13 72.0
Msa1297690 MtrunA17_Chr4g0067301 38.754 289 132 3 480 768 244 487 2.83e-56 201
Msa1297690 MtrunA17_Chr4g0067301 57.812 64 26 1 259 322 140 202 5.50e-14 75.5
Msa1297690 MtrunA17_Chr1g0213351 28.525 305 159 5 470 769 105 355 4.05e-34 134
Msa1297690 MtrunA17_Chr8g0371321 29.966 297 149 5 481 772 115 357 5.37e-32 129
Msa1297690 MtrunA17_Chr2g0294291 29.617 287 143 5 487 768 118 350 1.48e-30 124
Msa1297690 MtrunA17_Chr1g0207571 28.045 353 181 7 448 779 48 348 8.09e-30 122
Msa1297690 MtrunA17_Chr7g0250061 26.299 308 168 6 470 772 101 354 1.39e-28 118
Msa1297690 MtrunA17_Chr7g0263281 29.126 309 160 6 476 779 102 356 5.21e-28 116
Msa1297690 MtrunA17_Chr1g0181901 27.647 340 166 8 470 779 101 390 5.69e-28 117
Msa1297690 MtrunA17_Chr1g0211251 27.759 299 157 6 479 772 115 359 3.71e-25 108
Msa1297690 MtrunA17_Chr7g0223641 42.308 130 67 2 647 768 67 196 2.15e-23 99.0
Msa1297690 MtrunA17_Chr1g0175381 26.623 308 160 9 473 774 111 358 3.17e-23 102
Msa1297690 MtrunA17_Chr3g0089711 26.861 309 150 10 476 769 100 347 5.91e-20 92.4
Msa1297690 MtrunA17_Chr3g0089721 26.861 309 150 10 476 769 100 347 6.21e-20 92.4
Msa1297690 MtrunA17_Chr3g0089691 26.537 309 151 10 476 769 14 261 1.44e-19 90.5
Msa1297690 MtrunA17_Chr7g0256751 31.944 216 116 8 573 766 139 345 3.12e-17 85.1
Msa1297690 MtrunA17_Chr7g0256771 33.544 158 84 6 573 713 140 293 8.31e-13 70.1
Msa1297690 MtrunA17_Chr7g0256761 27.513 189 115 5 591 773 13 185 1.21e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297690 AT2G35350.1 55.298 821 288 29 1 780 1 783 0.0 764
Msa1297690 AT2G46920.3 43.148 883 361 30 1 779 1 846 0.0 563
Msa1297690 AT2G46920.1 43.148 883 361 30 1 779 1 846 0.0 563
Msa1297690 AT2G46920.2 43.148 883 361 30 1 779 1 846 0.0 563
Msa1297690 AT2G46920.4 43.148 883 361 30 1 779 1 846 0.0 563
Msa1297690 AT5G02400.1 40.000 770 300 20 40 776 33 673 9.92e-156 469
Msa1297690 AT1G07630.1 57.426 303 108 5 475 775 377 660 1.05e-108 347
Msa1297690 AT1G07630.1 36.915 363 135 14 1 317 1 315 1.71e-46 177
Msa1297690 AT2G28890.1 57.000 300 104 4 480 775 374 652 1.70e-105 338
Msa1297690 AT2G28890.1 35.952 420 171 17 1 377 1 365 1.16e-51 191
Msa1297690 AT3G09400.1 57.000 300 102 4 477 776 377 649 9.00e-104 333
Msa1297690 AT3G09400.1 33.438 317 132 10 36 316 31 304 1.17e-34 141
Msa1297690 AT3G09400.2 53.030 264 97 4 477 740 377 613 1.74e-77 263
Msa1297690 AT3G09400.2 33.438 317 132 10 36 316 31 304 1.14e-34 141
Msa1297690 AT3G16560.1 37.716 289 129 2 480 768 243 480 7.01e-60 211
Msa1297690 AT3G16560.1 58.929 56 23 0 259 314 151 206 3.70e-12 70.1
Msa1297690 AT3G16560.4 37.716 289 129 2 480 768 243 480 7.01e-60 211
Msa1297690 AT3G16560.4 58.929 56 23 0 259 314 151 206 3.70e-12 70.1
Msa1297690 AT3G16560.2 37.716 289 129 2 480 768 243 480 7.01e-60 211
Msa1297690 AT3G16560.2 58.929 56 23 0 259 314 151 206 3.70e-12 70.1
Msa1297690 AT3G16560.3 35.632 261 117 2 480 740 243 452 9.58e-47 173
Msa1297690 AT3G16560.3 58.929 56 23 0 259 314 151 206 3.55e-12 69.7
Msa1297690 AT3G12620.2 27.922 308 163 5 470 772 108 361 1.36e-33 134
Msa1297690 AT3G12620.1 27.922 308 163 5 470 772 108 361 1.36e-33 134
Msa1297690 AT3G55050.1 30.612 294 145 5 482 770 121 360 1.51e-32 130
Msa1297690 AT3G55050.2 30.612 294 145 5 482 770 121 360 1.51e-32 130
Msa1297690 AT4G38520.2 29.861 288 143 5 484 766 120 353 9.35e-32 129
Msa1297690 AT4G38520.1 29.861 288 143 5 484 766 120 353 9.35e-32 129
Msa1297690 AT5G66080.2 30.952 294 144 5 481 769 14 253 1.70e-31 125
Msa1297690 AT3G17090.1 29.897 291 144 5 483 768 123 358 5.45e-31 126
Msa1297690 AT5G66080.1 30.640 297 147 5 481 772 118 360 7.48e-31 125
Msa1297690 AT4G33920.1 27.966 354 183 8 448 780 48 350 6.91e-30 122
Msa1297690 AT4G33920.2 28.664 307 163 6 479 780 12 267 6.93e-30 120
Msa1297690 AT3G51370.1 28.231 294 152 5 481 769 115 354 1.36e-29 122
Msa1297690 AT3G51370.3 28.231 294 152 5 481 769 115 354 1.36e-29 122
Msa1297690 AT3G51370.2 28.912 294 150 5 481 769 30 269 2.37e-29 119
Msa1297690 AT5G02760.1 32.302 291 136 5 483 768 110 344 3.15e-29 120
Msa1297690 AT4G33920.3 29.167 288 148 6 498 780 1 237 6.47e-28 114
Msa1297690 AT5G06750.2 27.797 295 157 6 483 772 38 281 1.78e-25 108
Msa1297690 AT5G06750.3 27.797 295 157 6 483 772 120 363 2.33e-25 109
Msa1297690 AT5G06750.1 27.797 295 157 6 483 772 120 363 2.33e-25 109
Msa1297690 AT3G17090.2 28.390 236 113 4 483 713 123 307 6.49e-22 97.8

Find 315 sgRNAs with CRISPR-Local

Find 533 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGATGGACTTGATCTTTC+TGG 0.099082 8_3:-58186835 Msa1297690:CDS
AGTGACAGAACTTGCGTATT+TGG 0.202868 8_3:-58186482 Msa1297690:CDS
ATCCAATTTACCAGCTTTCT+TGG 0.203939 8_3:+58183669 None:intergenic
GAAGTTGTTACCGTGGAATT+TGG 0.238013 8_3:-58186647 Msa1297690:CDS
AGGTTCTGGTTTGGTGAATA+TGG 0.245862 8_3:-58186938 Msa1297690:CDS
ATGTTTCGTAATGAATTTAT+TGG 0.257607 8_3:-58183895 Msa1297690:CDS
AGCAGGGGTGGTTGTTTGTT+GGG 0.260464 8_3:-58187116 Msa1297690:CDS
TCCCTCCCCTTTGTCCCTTT+CGG 0.266738 8_3:-58188033 Msa1297690:five_prime_UTR
CCATTACCCTCCTTATGTTT+TGG 0.271568 8_3:+58186673 None:intergenic
TAGAGTTAGGAGATTCAAAA+TGG 0.279473 8_3:-58182034 Msa1297690:three_prime_UTR
TGGTGGGAGGAGGCGGAAAT+TGG 0.282453 8_3:-58186554 Msa1297690:CDS
AAGTTGTTACCGTGGAATTT+GGG 0.282468 8_3:-58186646 Msa1297690:CDS
CAATGTTCATAATGAGCTTC+AGG 0.293356 8_3:-58187034 Msa1297690:CDS
GGCGGCGCCGGTGGGGATTC+CGG 0.294891 8_3:-58187408 Msa1297690:CDS
CTTAAGGTCACCAGAGCATT+TGG 0.295370 8_3:-58185520 Msa1297690:CDS
AGAAAGGTGTGTCAGGGTTT+AGG 0.301426 8_3:-58187323 Msa1297690:CDS
GAAGCTATGACATCATCTTT+AGG 0.307616 8_3:+58182493 None:intergenic
GGTAAGGGTAATATTGTAAA+TGG 0.309964 8_3:-58187558 Msa1297690:CDS
GAAAACAAACCCTCTGCTTC+TGG 0.312232 8_3:-58186589 Msa1297690:CDS
GGATATGACGGAAAAGCTTC+TGG 0.313191 8_3:-58186461 Msa1297690:CDS
ATGAGCTTCAGGGTTTGTTT+TGG 0.315360 8_3:-58187023 Msa1297690:CDS
ATGGTACAACAGACTGAAAT+TGG 0.316789 8_3:-58186919 Msa1297690:CDS
GAAGAGTCCTTTGCTTTAGA+TGG 0.323123 8_3:-58186238 Msa1297690:CDS
AGTAAAATGTCGGTGTATAT+TGG 0.328547 8_3:-58182148 Msa1297690:three_prime_UTR
GAGCAGGGGTGGTTGTTTGT+TGG 0.330236 8_3:-58187117 Msa1297690:CDS
CCACCGGCGCCGCCGTTAAT+CGG 0.331241 8_3:+58187417 None:intergenic
CCCCTTTGTCCCTTTCGGAT+TGG 0.332221 8_3:-58188028 Msa1297690:five_prime_UTR
ACTCCAGCTCCCATCACATT+AGG 0.332953 8_3:+58187957 None:intergenic
CTGGTAGTGGTGGTGGGAGG+AGG 0.336277 8_3:-58186564 Msa1297690:CDS
CACCATATCAAATTAGAGTT+AGG 0.338175 8_3:-58182047 Msa1297690:three_prime_UTR
CTCCTAACTCTAATTTGATA+TGG 0.338585 8_3:+58182045 None:intergenic
TCGGGTTCATGTGGTGGTTT+CGG 0.339032 8_3:-58187142 Msa1297690:CDS
GATCCCTTGGGCTTAATCTA+TGG 0.344114 8_3:+58183833 None:intergenic
AAAAGCGGTTTCACGAAAAT+CGG 0.344431 8_3:+58187698 None:intergenic
GAGGGAGAAAATTCAGGTTC+TGG 0.349852 8_3:-58186952 Msa1297690:CDS
AAGCTATGACATCATCTTTA+GGG 0.353224 8_3:+58182494 None:intergenic
AAATCCTGAACTTGCTTTGA+TGG 0.353828 8_3:-58186434 Msa1297690:CDS
CACCTCCACTGCCTTCTCCT+TGG 0.354125 8_3:+58187212 None:intergenic
ACCGTGGAATTTGGGGAATC+AGG 0.355154 8_3:-58186638 Msa1297690:CDS
CGATTAACGGCGGCGCCGGT+GGG 0.364404 8_3:-58187416 Msa1297690:CDS
TTCTCAAGTTGAGAGCTTCA+TGG 0.365862 8_3:-58183752 Msa1297690:CDS
ATTTACAATATTACCCTTAC+CGG 0.369542 8_3:+58187560 None:intergenic
AGAGAAAGAAGAAAAGTCTA+AGG 0.374405 8_3:-58186614 Msa1297690:CDS
TTAAGGTCACCAGAGCATTT+GGG 0.376676 8_3:-58185519 Msa1297690:CDS
TGTGGTGGTTTCGGAGGAGC+AGG 0.376868 8_3:-58187133 Msa1297690:CDS
CAGTGGGCGTTAGGGAAGGC+TGG 0.377014 8_3:-58187171 Msa1297690:CDS
GGACAAAGGGGAGGGAAGCG+AGG 0.381985 8_3:+58188040 None:intergenic
GGGTCCGGTGGATCATGATT+TGG 0.382243 8_3:-58186533 Msa1297690:CDS
GGAAGGAAGAAAGGTGTGTC+AGG 0.387929 8_3:-58187330 Msa1297690:CDS
AAGATGGACTTGATCTTTCT+GGG 0.389359 8_3:-58186834 Msa1297690:CDS
TGTTGGGAGGAAAGAGGTTC+CGG 0.389401 8_3:-58187235 Msa1297690:CDS
ATAGTCAATGATAGAGTTAA+AGG 0.391835 8_3:-58185547 Msa1297690:CDS
CCGATTAACGGCGGCGCCGG+TGG 0.392761 8_3:-58187417 Msa1297690:CDS
TCTATCATTGACTATGCAAC+GGG 0.393238 8_3:+58185555 None:intergenic
TTTCTGTTACGTTAGATCTT+CGG 0.394176 8_3:-58187820 Msa1297690:CDS
AGACATCGCAGACAGGCTTA+TGG 0.394262 8_3:-58182357 Msa1297690:three_prime_UTR
AAGCCTGTCTGCGATGTCTA+AGG 0.396094 8_3:+58182361 None:intergenic
TACAAGTGTACTGATTTAAC+TGG 0.398388 8_3:-58182119 Msa1297690:three_prime_UTR
TTATGAGCCCAAGGAGGATC+AGG 0.399296 8_3:-58186329 Msa1297690:CDS
CGGATTGGACTTAGGCGGTT+GGG 0.400961 8_3:-58188013 Msa1297690:five_prime_UTR
AAGATGGACGGGTGCGGAAA+TGG 0.405008 8_3:+58182273 None:intergenic
GGAAGTACCCTGATCCTCCT+TGG 0.406399 8_3:+58186321 None:intergenic
CACCGGAATCTACTTCTCTT+CGG 0.409205 8_3:-58187758 Msa1297690:CDS
TCTGGCACTGGTAGTGGTGG+TGG 0.411034 8_3:-58186571 Msa1297690:CDS
GAAAAGGAGGGAGAAAATTC+AGG 0.411785 8_3:-58186958 Msa1297690:CDS
AGAAAATTCAGGTTCTGGTT+TGG 0.412099 8_3:-58186947 Msa1297690:CDS
TTGTTGTTCCGGTGTTGAAC+CGG 0.413218 8_3:+58187909 None:intergenic
TCCACTGCCTTCTCCTTGGC+CGG 0.417303 8_3:+58187216 None:intergenic
GCGGTTGGGTTCATCTGAAC+CGG 0.420379 8_3:-58187999 Msa1297690:five_prime_UTR
GAAAGATCAAGTCCATCTTC+AGG 0.421503 8_3:+58186838 None:intergenic
GGTGGGAGGAGGCGGAAATT+GGG 0.421685 8_3:-58186553 Msa1297690:CDS
CATTAAAATCTGAGATTCCT+AGG 0.422412 8_3:+58182409 None:intergenic
TGACAAACCGTTCTTCAGTC+TGG 0.425095 8_3:+58186720 None:intergenic
TCCAATCCGAAAGGGACAAA+GGG 0.426458 8_3:+58188027 None:intergenic
GCGCACTCTGGGCCGATTAA+CGG 0.427554 8_3:-58187429 Msa1297690:CDS
GGAAGAATCTGGAAATCGTC+AGG 0.427584 8_3:-58182588 Msa1297690:CDS
CGGAAGAGATGTTCCATTCT+CGG 0.428358 8_3:-58187373 Msa1297690:CDS
CTCCAGCTCCCATCACATTA+GGG 0.429257 8_3:+58187958 None:intergenic
TCTGCTTCTGGCACTGGTAG+TGG 0.429359 8_3:-58186577 Msa1297690:CDS
CTGGCACTGGTAGTGGTGGT+GGG 0.429653 8_3:-58186570 Msa1297690:CDS
GAAGCGGCCGTGGGTGGTGC+CGG 0.431595 8_3:-58187268 Msa1297690:CDS
TTCAACTATGCTCTCACTGC+TGG 0.432572 8_3:+58186258 None:intergenic
CAGCTCTTCAATTAAATGTT+GGG 0.433697 8_3:+58183705 None:intergenic
TAAGCTTACTTCTTTAATGC+TGG 0.435863 8_3:+58186123 None:intergenic
CTTCGGAGAAGAAGCGGCCG+TGG 0.436890 8_3:-58187278 Msa1297690:CDS
GGGGATTCCGGTGGTGTAGG+TGG 0.441277 8_3:-58187396 Msa1297690:CDS
GAACCCATCAAAGCAAGTTC+AGG 0.441311 8_3:+58186430 None:intergenic
GAGTAAACGGCGTAGGTTGT+GGG 0.442040 8_3:-58186878 Msa1297690:CDS
GAAGGGAAGCAGGATATGTA+TGG 0.443366 8_3:+58183865 None:intergenic
AGGGAAGGCTGGGGAAGATC+GGG 0.444910 8_3:-58187160 Msa1297690:CDS
GTAGTGGTGGTGGGAGGAGG+CGG 0.445074 8_3:-58186561 Msa1297690:CDS
ACTATGCAACGGGGATCATC+AGG 0.445287 8_3:+58185565 None:intergenic
GAAGTACCCTGATCCTCCTT+GGG 0.445862 8_3:+58186322 None:intergenic
TGAGGCGTTCAACTTTCTGT+TGG 0.446080 8_3:-58182555 Msa1297690:three_prime_UTR
GACTGAAATTGGACCGGCTG+TGG 0.448174 8_3:-58186908 Msa1297690:CDS
AGAGTAAACGGCGTAGGTTG+TGG 0.448331 8_3:-58186879 Msa1297690:CDS
CCTCCTAACGGTGCCGAGAA+TGG 0.451026 8_3:+58187360 None:intergenic
CCGATTGAGAGTGCGCACTC+TGG 0.451055 8_3:-58187441 Msa1297690:CDS
ACGTGTATGTTATGAATGTT+GGG 0.451393 8_3:-58186375 Msa1297690:CDS
GACGTGTATGTTATGAATGT+TGG 0.451710 8_3:-58186376 Msa1297690:CDS
GGGCCGATTAACGGCGGCGC+CGG 0.452053 8_3:-58187420 Msa1297690:CDS
ATCCCTAATGTGATGGGAGC+TGG 0.452819 8_3:-58187960 Msa1297690:exon
GCCGCCGTTGGAGGAGGTTG+TGG 0.454293 8_3:-58187597 Msa1297690:CDS
TATCACTTGAAGGAAGAATC+TGG 0.454496 8_3:-58182599 Msa1297690:CDS
TAGGGAAGGCTGGGGAAGAT+CGG 0.454811 8_3:-58187161 Msa1297690:CDS
TCTTCCGCCGCCGTTGGAGG+AGG 0.455984 8_3:-58187603 Msa1297690:CDS
GTCCCTTTCGGATTGGACTT+AGG 0.460445 8_3:-58188021 Msa1297690:five_prime_UTR
CTGTGGGAACGGAGAGTAAA+CGG 0.463635 8_3:-58186891 Msa1297690:CDS
TAATAGTTCTGTTCCGAAAA+CGG 0.463952 8_3:-58187646 Msa1297690:CDS
GTTGTGTTCTTGTTTCGAAC+CGG 0.465481 8_3:-58187928 Msa1297690:CDS
ATTTCAACGGAAGGTGTCTT+CGG 0.465761 8_3:-58187295 Msa1297690:CDS
AGGATCAGGAACTGATCCCT+TGG 0.465955 8_3:+58183820 None:intergenic
GCAGCTCTTCAATTAAATGT+TGG 0.467121 8_3:+58183704 None:intergenic
TCGGATTGGACTTAGGCGGT+TGG 0.467207 8_3:-58188014 Msa1297690:five_prime_UTR
TTGGCTGAAGATCCTGAAGA+TGG 0.467894 8_3:-58186850 Msa1297690:CDS
TTGGGGCAGGATCTTTGAAA+AGG 0.471296 8_3:-58185501 Msa1297690:CDS
CGATTGAGAGTGCGCACTCT+GGG 0.472196 8_3:-58187440 Msa1297690:CDS
GTTCCATTCTCGGCACCGTT+AGG 0.473929 8_3:-58187363 Msa1297690:CDS
AATAGTAACGTCTTGGTTGT+CGG 0.474148 8_3:+58187881 None:intergenic
CCAGAGTGCGCACTCTCAAT+CGG 0.475630 8_3:+58187441 None:intergenic
CTCCGATCGCTTTCTCTCAC+CGG 0.476274 8_3:-58187775 Msa1297690:CDS
TCCGGCCAAGGAGAAGGCAG+TGG 0.476718 8_3:-58187217 Msa1297690:CDS
AAAGCGGTTTCACGAAAATC+GGG 0.477443 8_3:+58187699 None:intergenic
CTCATTGCCGACCTTGATTG+TGG 0.478209 8_3:+58186201 None:intergenic
GAACGGTTTGTCAAAGCATA+AGG 0.480337 8_3:-58186710 Msa1297690:CDS
AACCATCAGATGAGAGGATC+AGG 0.482736 8_3:+58183806 None:intergenic
TCATGATGATGTTACTGTTA+TGG 0.483255 8_3:-58182625 Msa1297690:CDS
TGATGGTTTGCCAAAACATA+AGG 0.483346 8_3:-58186683 Msa1297690:CDS
TAGCAATGCCAATGCAGGTT+CGG 0.483560 8_3:-58186770 Msa1297690:CDS
AATCCTGAACTTGCTTTGAT+GGG 0.486164 8_3:-58186433 Msa1297690:CDS
TTTGATGGGTTCATGTCTGT+TGG 0.486882 8_3:-58186419 Msa1297690:CDS
AATGCCAATGCAGGTTCGGC+AGG 0.487353 8_3:-58186766 Msa1297690:CDS
AATGTTCATAATGAGCTTCA+GGG 0.487722 8_3:-58187033 Msa1297690:CDS
GGGATGTATGGAAGGAAGAA+AGG 0.487873 8_3:-58187339 Msa1297690:CDS
TTGATCTTTCTGGGTCGGAT+AGG 0.489502 8_3:-58186825 Msa1297690:CDS
GGATCAGGAACTGATCCCTT+GGG 0.489833 8_3:+58183821 None:intergenic
AACCGAAGAGAAGTAGATTC+CGG 0.490054 8_3:+58187756 None:intergenic
TTACTCTCCGTTCCCACAGC+CGG 0.491950 8_3:+58186895 None:intergenic
GAAAGAAGAAAAGTCTAAGG+TGG 0.493865 8_3:-58186611 Msa1297690:CDS
TAACCCCGTTGAGGTGGAAA+AGG 0.494170 8_3:-58186974 Msa1297690:CDS
AAACCCTCTGCTTCTGGCAC+TGG 0.494612 8_3:-58186583 Msa1297690:CDS
TTCCTGATCCTCTCATCTGA+TGG 0.496445 8_3:-58183808 Msa1297690:CDS
GGTGGGGATTCCGGTGGTGT+AGG 0.497618 8_3:-58187399 Msa1297690:CDS
GAGGGAAGAAGAGTGAAGTA+AGG 0.498531 8_3:+58188059 None:intergenic
CTCCGTGCAGCCAAGAAAGC+TGG 0.499456 8_3:-58183679 Msa1297690:intron
GAAGTTGAATGATGCCGTAC+TGG 0.501042 8_3:-58183920 Msa1297690:CDS
GCACCGTTAGGAGGGATGTA+TGG 0.503783 8_3:-58187351 Msa1297690:CDS
AGATCCTGCCCCAAATGCTC+TGG 0.504656 8_3:+58185510 None:intergenic
TCTTCAATTAAATGTTGGGC+AGG 0.506729 8_3:+58183709 None:intergenic
AGTGTTAGCAATGCCAATGC+AGG 0.507381 8_3:-58186775 Msa1297690:CDS
AGAGGTTCCGGCCAAGGAGA+AGG 0.509866 8_3:-58187223 Msa1297690:CDS
GTTACGTTAGATCTTCGGCC+AGG 0.510157 8_3:-58187815 Msa1297690:CDS
GACAAAGGGGAGGGAAGCGA+GGG 0.512267 8_3:+58188041 None:intergenic
GATTCCGGTGGTGTAGGTGG+CGG 0.515125 8_3:-58187393 Msa1297690:CDS
CCAAAACATAAGGAGGGTAA+TGG 0.517060 8_3:-58186673 Msa1297690:CDS
CAGTGAAAATAGTAACGTCT+TGG 0.517578 8_3:+58187874 None:intergenic
TAGAGTTAAAGGTCGTCTTA+AGG 0.517854 8_3:-58185536 Msa1297690:CDS
TGGGGCAGGATCTTTGAAAA+GGG 0.517879 8_3:-58185500 Msa1297690:intron
CCCCGTTGAGGTGGAAAAGG+AGG 0.521172 8_3:-58186971 Msa1297690:CDS
AAATATGACAATCTGTAGCC+GGG 0.521547 8_3:-58182080 Msa1297690:three_prime_UTR
ACTGCCTGCCGAACCTGCAT+TGG 0.521699 8_3:+58186762 None:intergenic
AAATGTCGGTGTATATTGGT+GGG 0.522053 8_3:-58182144 Msa1297690:three_prime_UTR
GTGACGTACTGAAGGGAAGC+AGG 0.522740 8_3:+58183855 None:intergenic
GAAATATGACAATCTGTAGC+CGG 0.523145 8_3:-58182081 Msa1297690:three_prime_UTR
GAAGAATCTTCCGCCGCCGT+TGG 0.523536 8_3:-58187609 Msa1297690:CDS
AACTCACCACCTCTCGGCAC+AGG 0.523662 8_3:+58187495 None:intergenic
TTCAACACCGGCACCACCCA+CGG 0.524658 8_3:+58187261 None:intergenic
AAAATGTCGGTGTATATTGG+TGG 0.524793 8_3:-58182145 Msa1297690:three_prime_UTR
TACCAGCTTTCTTGGCTGCA+CGG 0.525448 8_3:+58183677 None:intergenic
GTTATGGTGATATCACTTGA+AGG 0.526658 8_3:-58182609 Msa1297690:CDS
CTTCTTTAATGCTGGTGCTG+TGG 0.526929 8_3:+58186131 None:intergenic
CAATGTGGAATCTGCAAGCA+AGG 0.527206 8_3:-58186299 Msa1297690:CDS
AATCTATGGTGACGTACTGA+AGG 0.529114 8_3:+58183847 None:intergenic
CGCCTAAGTCCAATCCGAAA+GGG 0.530408 8_3:+58188019 None:intergenic
AGTGGGCGTTAGGGAAGGCT+GGG 0.530607 8_3:-58187170 Msa1297690:CDS
ACAATCAAGGTCGGCAATGA+GGG 0.532238 8_3:-58186199 Msa1297690:CDS
TGGATATTCCGCAAGGAGAT+CGG 0.532409 8_3:-58182656 Msa1297690:CDS
GATTAACGGCGGCGCCGGTG+GGG 0.534199 8_3:-58187415 Msa1297690:CDS
CACAATCAAGGTCGGCAATG+AGG 0.534807 8_3:-58186200 Msa1297690:CDS
GTAATGTGCAGTGGGCGTTA+GGG 0.537651 8_3:-58187179 Msa1297690:CDS
AATTGGACCGGCTGTGGGAA+CGG 0.538368 8_3:-58186902 Msa1297690:CDS
GGTTTCACGAAAATCGGGTC+GGG 0.539243 8_3:+58187704 None:intergenic
ACGGGGTTATGACTCTCCAT+TGG 0.539445 8_3:+58186988 None:intergenic
GTGGTGGTTTCGGAGGAGCA+GGG 0.540974 8_3:-58187132 Msa1297690:CDS
GTCACCAGAGCATTTGGGGC+AGG 0.541067 8_3:-58185514 Msa1297690:CDS
GGAAGATCGGGTTCATGTGG+TGG 0.541143 8_3:-58187148 Msa1297690:CDS
GAATCTTCCGCCGCCGTTGG+AGG 0.542089 8_3:-58187606 Msa1297690:CDS
TGGTTTCGGAGGAGCAGGGG+TGG 0.544201 8_3:-58187128 Msa1297690:CDS
GAGGAAAGAGGTTCCGGCCA+AGG 0.544675 8_3:-58187229 Msa1297690:CDS
CTAACTCTAATTTGATATGG+TGG 0.544749 8_3:+58182048 None:intergenic
ATTACGAAACATTTCCAGTA+CGG 0.546308 8_3:+58183906 None:intergenic
GTTTCGAACCGGTTCAACAC+CGG 0.546334 8_3:-58187917 Msa1297690:CDS
TGTTGGGCAGGATCTCCGTC+TGG 0.546419 8_3:+58183721 None:intergenic
CGTAACAGAAAGAATGACCT+AGG 0.547569 8_3:+58187832 None:intergenic
GCACTGGTAGTGGTGGTGGG+AGG 0.548400 8_3:-58186567 Msa1297690:CDS
TCAAAGCATAAGGAGGGTGA+TGG 0.551649 8_3:-58186700 Msa1297690:CDS
AAGGGAAGCAGGATATGTAT+GGG 0.551727 8_3:+58183866 None:intergenic
TTACTACATCCCTAATGTGA+TGG 0.552278 8_3:-58187967 Msa1297690:exon
TACTACATCCCTAATGTGAT+GGG 0.552434 8_3:-58187966 Msa1297690:exon
TGGACTTGATCTTTCTGGGT+CGG 0.553674 8_3:-58186830 Msa1297690:CDS
CTCTATCATTGACTATGCAA+CGG 0.554400 8_3:+58185554 None:intergenic
GGAGAAGAAGCGGCCGTGGG+TGG 0.554476 8_3:-58187274 Msa1297690:CDS
CAGGTTCGGCAGGCAGTAGA+CGG 0.555129 8_3:-58186756 Msa1297690:CDS
TGACCTAGGGTTTCATCTAA+CGG 0.556271 8_3:+58187846 None:intergenic
TAGGAAGGCATTTCAACGGA+AGG 0.557068 8_3:-58187304 Msa1297690:CDS
GTCCAATCCGAAAGGGACAA+AGG 0.557390 8_3:+58188026 None:intergenic
TCAAACTGAAACCACAATCA+AGG 0.557456 8_3:-58186212 Msa1297690:CDS
TGGTGGTTTCGGAGGAGCAG+GGG 0.557886 8_3:-58187131 Msa1297690:CDS
CTTCCTTAGACATCGCAGAC+AGG 0.559147 8_3:-58182364 Msa1297690:three_prime_UTR
TGCTCAAGAAATGAGGTTGG+CGG 0.560141 8_3:-58186173 Msa1297690:CDS
ACCACAACCTCCTCCAACGG+CGG 0.560322 8_3:+58187596 None:intergenic
GAGGAGGCGGAAATTGGGTC+CGG 0.562555 8_3:-58186548 Msa1297690:CDS
ACAACCTCCTCCAACGGCGG+CGG 0.565002 8_3:+58187599 None:intergenic
CACTCTGGGCCGATTAACGG+CGG 0.566289 8_3:-58187426 Msa1297690:CDS
GAGTCATAACCCCGTTGAGG+TGG 0.567015 8_3:-58186980 Msa1297690:CDS
CTTGCTTGCAGATTCCACAT+TGG 0.567122 8_3:+58186300 None:intergenic
TCCTGATTCCCCAAATTCCA+CGG 0.568105 8_3:+58186637 None:intergenic
TACACCACCGGAATCCCCAC+CGG 0.568992 8_3:+58187401 None:intergenic
ATCCGAAAGGGACAAAGGGG+AGG 0.569112 8_3:+58188031 None:intergenic
CATTCTCGGCACCGTTAGGA+GGG 0.569173 8_3:-58187359 Msa1297690:CDS
ATCATCTTTAGGGCAATCCC+AGG 0.570116 8_3:+58182504 None:intergenic
TTGAGTTCCATCTAAAGCAA+AGG 0.574261 8_3:+58186231 None:intergenic
GAAGGAAGAAAGGTGTGTCA+GGG 0.575606 8_3:-58187329 Msa1297690:CDS
ACCAGAAATAGCTTTAAAAG+CGG 0.576874 8_3:+58187683 None:intergenic
CTAAGAACCGATTCATGAGT+AGG 0.577073 8_3:+58187729 None:intergenic
CCCGTTGAGGTGGAAAAGGA+GGG 0.577243 8_3:-58186970 Msa1297690:CDS
TGGGGAAGATCGGGTTCATG+TGG 0.578579 8_3:-58187151 Msa1297690:CDS
GGTTCATGTGGTGGTTTCGG+AGG 0.579440 8_3:-58187139 Msa1297690:CDS
AGCAAGGGAGATGTTCGTGT+TGG 0.581556 8_3:-58186283 Msa1297690:CDS
CTTCAACCTGTGCCGAGAGG+TGG 0.582633 8_3:-58187501 Msa1297690:CDS
TTCTGCTCAAGAAATGAGGT+TGG 0.583278 8_3:-58186176 Msa1297690:CDS
CGTTAGGAGGGATGTATGGA+AGG 0.583560 8_3:-58187347 Msa1297690:CDS
TCCGAAAGGGACAAAGGGGA+GGG 0.584122 8_3:+58188032 None:intergenic
ACTGAAATTGGACCGGCTGT+GGG 0.586327 8_3:-58186907 Msa1297690:CDS
TAAGGTCACCAGAGCATTTG+GGG 0.586392 8_3:-58185518 Msa1297690:CDS
CTTCCATACATCCCTCCTAA+CGG 0.586636 8_3:+58187348 None:intergenic
TGATGGGAGCTGGAGTTTCG+AGG 0.588110 8_3:-58187950 Msa1297690:CDS
AGGGTTCTGCTCAAGAAATG+AGG 0.591211 8_3:-58186180 Msa1297690:CDS
TTCGGAGAAGAAGCGGCCGT+GGG 0.593745 8_3:-58187277 Msa1297690:CDS
CGGTTTCACGAAAATCGGGT+CGG 0.594346 8_3:+58187703 None:intergenic
TCTTCCGCCACCTACACCAC+CGG 0.595356 8_3:+58187389 None:intergenic
TGTGCAGTGGGCGTTAGGGA+AGG 0.596261 8_3:-58187175 Msa1297690:CDS
AACATAAGGAGGGTAATGGT+AGG 0.596849 8_3:-58186669 Msa1297690:CDS
AGGGAAGAAGAGTGAAGTAA+GGG 0.598427 8_3:+58188060 None:intergenic
TTGTTTGTTGGGATTTACGA+CGG 0.599779 8_3:-58187105 Msa1297690:CDS
TTGGGAACTTGATGAACCAA+TGG 0.600194 8_3:-58187004 Msa1297690:CDS
GGCCAAGGAGAAGGCAGTGG+AGG 0.600282 8_3:-58187214 Msa1297690:CDS
AGTACGGCATCATTCAACTT+CGG 0.600363 8_3:+58183922 None:intergenic
ATCTATGGTGACGTACTGAA+GGG 0.601252 8_3:+58183848 None:intergenic
GTGCGCACTCTCAATCGGAC+CGG 0.602532 8_3:+58187446 None:intergenic
CGGTTTGTCAAAGCATAAGG+AGG 0.603543 8_3:-58186707 Msa1297690:CDS
GCTTCTGGCACTGGTAGTGG+TGG 0.603968 8_3:-58186574 Msa1297690:CDS
TGGTTTGCCAAAACATAAGG+AGG 0.605933 8_3:-58186680 Msa1297690:CDS
CCGCCTAAGTCCAATCCGAA+AGG 0.607046 8_3:+58188018 None:intergenic
GCCACCACAACCTCCTCCAA+CGG 0.608052 8_3:+58187593 None:intergenic
TTCCGGTGAGAGAAAGCGAT+CGG 0.608311 8_3:+58187773 None:intergenic
ACTTGCGTATTTGGATATGA+CGG 0.608770 8_3:-58186473 Msa1297690:CDS
ACTACCAGTGCCAGAAGCAG+AGG 0.609229 8_3:+58186579 None:intergenic
AAAACCAAATCATGATCCAC+CGG 0.609288 8_3:+58186529 None:intergenic
CTCCCAACAAAATTCAACAC+CGG 0.609475 8_3:+58187249 None:intergenic
AGAAAGCGATCGGAGTGAGT+CGG 0.611067 8_3:+58187783 None:intergenic
GGCTGAGCCAAGTAAAATGT+CGG 0.613252 8_3:-58182158 Msa1297690:three_prime_UTR
AGTTGTTACCGTGGAATTTG+GGG 0.613438 8_3:-58186645 Msa1297690:CDS
ACAACAGACTGAAATTGGAC+CGG 0.613451 8_3:-58186914 Msa1297690:CDS
GCCGTTGGAGGAGGTTGTGG+TGG 0.613965 8_3:-58187594 Msa1297690:CDS
AATGTCGGTGTATATTGGTG+GGG 0.620390 8_3:-58182143 Msa1297690:three_prime_UTR
AGGTGTCTTCGGAGAAGAAG+CGG 0.621311 8_3:-58187284 Msa1297690:CDS
CCTCTCGGCACAGGTTGAAG+CGG 0.626602 8_3:+58187504 None:intergenic
TTCATGGAAAAGTTTCCAGA+CGG 0.626955 8_3:-58183736 Msa1297690:CDS
TATGAGCCCAAGGAGGATCA+GGG 0.626958 8_3:-58186328 Msa1297690:CDS
CCTTTCGGATTGGACTTAGG+CGG 0.628350 8_3:-58188018 Msa1297690:five_prime_UTR
TTGCTGTCCAGACTGAAGAA+CGG 0.628481 8_3:-58186727 Msa1297690:CDS
AGGTGTGTCAGGGTTTAGGA+AGG 0.628635 8_3:-58187319 Msa1297690:CDS
ATATGGTGGAAATCCACCCC+CGG 0.628895 8_3:+58182062 None:intergenic
TACTTCCTCCGATCTCCTTG+CGG 0.628898 8_3:+58182648 None:intergenic
GAGGCGGAAATTGGGTCCGG+TGG 0.633186 8_3:-58186545 Msa1297690:CDS
TGTAGCACATTATGAGCCCA+AGG 0.633891 8_3:-58186338 Msa1297690:CDS
GTGGGCGTTAGGGAAGGCTG+GGG 0.638967 8_3:-58187169 Msa1297690:CDS
GGTTTAGGAAGGCATTTCAA+CGG 0.639426 8_3:-58187308 Msa1297690:CDS
GTGAGTCGGAGAAAGAAACC+TGG 0.642081 8_3:+58187797 None:intergenic
ATCTTTAGGGCAATCCCAGG+TGG 0.642322 8_3:+58182507 None:intergenic
TTAGGAGATTCAAAATGGAG+AGG 0.643307 8_3:-58182029 Msa1297690:three_prime_UTR
GAACGGAGAGTAAACGGCGT+AGG 0.647260 8_3:-58186885 Msa1297690:CDS
GAACCGTTAGATGAAACCCT+AGG 0.650582 8_3:-58187849 Msa1297690:CDS
AATGTGGAATCTGCAAGCAA+GGG 0.652423 8_3:-58186298 Msa1297690:CDS
AAATGAGAGTAATGTGCAGT+GGG 0.653248 8_3:-58187187 Msa1297690:CDS
GATACAAACCATCAGATGAG+AGG 0.653579 8_3:+58183800 None:intergenic
GTAACAGAAAGAATGACCTA+GGG 0.653602 8_3:+58187833 None:intergenic
GTCACCATAGATTAAGCCCA+AGG 0.654258 8_3:-58183837 Msa1297690:CDS
GGCGCCGGTGGGGATTCCGG+TGG 0.657142 8_3:-58187405 Msa1297690:CDS
AATATGACAATCTGTAGCCG+GGG 0.659107 8_3:-58182079 Msa1297690:three_prime_UTR
GTTCGGCAGGCAGTAGACGG+TGG 0.661155 8_3:-58186753 Msa1297690:CDS
ACTGAAACCACAATCAAGGT+CGG 0.661842 8_3:-58186208 Msa1297690:CDS
TCACCATAGATTAAGCCCAA+GGG 0.662089 8_3:-58183836 Msa1297690:CDS
GGAGAGTCATAACCCCGTTG+AGG 0.669683 8_3:-58186983 Msa1297690:CDS
GAAGAATCTGGAAATCGTCA+GGG 0.671865 8_3:-58182587 Msa1297690:CDS
CTACCAGTGCCAGAAGCAGA+GGG 0.672046 8_3:+58186580 None:intergenic
CCGCTTCAACCTGTGCCGAG+AGG 0.673541 8_3:-58187504 Msa1297690:CDS
GAATTGCTGGATATTCCGCA+AGG 0.675248 8_3:-58182663 Msa1297690:CDS
GGTTTGCCAAAACATAAGGA+GGG 0.677723 8_3:-58186679 Msa1297690:CDS
ATGGTAGGAAGTTGTTACCG+TGG 0.680126 8_3:-58186654 Msa1297690:CDS
GGTTTGTCAAAGCATAAGGA+GGG 0.688138 8_3:-58186706 Msa1297690:CDS
CAGCTTTCTTGGCTGCACGG+AGG 0.689514 8_3:+58183680 None:intergenic
ACGGGTGCGGAAATGGTGAA+CGG 0.689905 8_3:+58182280 None:intergenic
AGGGAAGCAGGATATGTATG+GGG 0.690908 8_3:+58183867 None:intergenic
ATATTCCGCAAGGAGATCGG+AGG 0.695322 8_3:-58182653 Msa1297690:CDS
CCAATCCGAAAGGGACAAAG+GGG 0.695723 8_3:+58188028 None:intergenic
GGATCAGGGTACTTCCAATG+TGG 0.706383 8_3:-58186314 Msa1297690:CDS
ATATGACAATCTGTAGCCGG+GGG 0.713147 8_3:-58182078 Msa1297690:three_prime_UTR
GAAGCTCATTATGAACATTG+CGG 0.714210 8_3:+58187037 None:intergenic
AAAATGAGAGTAATGTGCAG+TGG 0.715636 8_3:-58187188 Msa1297690:CDS
CGTGTATGTTATGAATGTTG+GGG 0.729255 8_3:-58186374 Msa1297690:CDS
AGCACATTATGAGCCCAAGG+AGG 0.756620 8_3:-58186335 Msa1297690:CDS
TCGTCAGGGAAATATCTGTG+AGG 0.770882 8_3:-58182573 Msa1297690:exon
CTATCATTGACTATGCAACG+GGG 0.777249 8_3:+58185556 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTATTTTTTTGC+AGG - chr8_3:58184517-58184536 Msa1297690:intron 10.0%
!! ATAAATTTAGTAAAAGAAAG+AGG + chr8_3:58184690-58184709 None:intergenic 15.0%
!! AATGTAAAATCAAAATAGAA+AGG - chr8_3:58185065-58185084 Msa1297690:intron 15.0%
!! TATTATATATATTAGAAGAG+TGG - chr8_3:58185653-58185672 Msa1297690:intron 15.0%
!!! ACACATTTTAATAGAAAAAA+AGG + chr8_3:58186705-58186724 None:intergenic 15.0%
!!! TAAATTTTATATCACTTCAT+AGG - chr8_3:58186913-58186932 Msa1297690:CDS 15.0%
!!! AAGCTTAATTTTGAATTTGT+AGG - chr8_3:58184024-58184043 Msa1297690:intron 20.0%
!!! ACAGATGAAATTTATGATTT+TGG - chr8_3:58184295-58184314 Msa1297690:intron 20.0%
!!! TTTTTAAGTTTCTGTAGTTA+TGG - chr8_3:58184422-58184441 Msa1297690:intron 20.0%
!! ATTAAAACAAAATGTTTCAG+TGG + chr8_3:58184887-58184906 None:intergenic 20.0%
!!! TTAAAGTTGTATTTTTCTGT+AGG + chr8_3:58185285-58185304 None:intergenic 20.0%
!! CAGAAAAATACAACTTTAAA+AGG - chr8_3:58185286-58185305 Msa1297690:intron 20.0%
!! ATTTAAGAAAATGTGATAAG+CGG - chr8_3:58185793-58185812 Msa1297690:intron 20.0%
!! TTCTAATATTGAGTTTCATA+TGG - chr8_3:58185902-58185921 Msa1297690:intron 20.0%
!! ATGTTTCGTAATGAATTTAT+TGG - chr8_3:58186236-58186255 Msa1297690:CDS 20.0%
!! TGTAAAACAAAAGATACAAA+AGG + chr8_3:58186495-58186514 None:intergenic 20.0%
!! AAAGACAACATAATTATTTG+AGG + chr8_3:58186737-58186756 None:intergenic 20.0%
!!! TCTAGATTATTTCTTAAATC+TGG - chr8_3:58186939-58186958 Msa1297690:CDS 20.0%
!!! CTAGATTATTTCTTAAATCT+GGG - chr8_3:58186940-58186959 Msa1297690:CDS 20.0%
!!! TTTTGCAATAATCAAGAAAT+CGG + chr8_3:58186976-58186995 None:intergenic 20.0%
!!! TCATTTGTAGATAATGTTTT+AGG - chr8_3:58187354-58187373 Msa1297690:CDS 20.0%
!! TATAATAACTGCAAAAAAGA+TGG + chr8_3:58187877-58187896 None:intergenic 20.0%
!!! GATGTAGTAATTTTGTTTTC+CGG + chr8_3:58182154-58182173 None:intergenic 25.0%
! ATTTACAATATTACCCTTAC+CGG + chr8_3:58182574-58182593 None:intergenic 25.0%
!!! TACTTCACTTTTGTCAATTT+TGG - chr8_3:58184073-58184092 Msa1297690:intron 25.0%
!! ACTTAGCAAAAAGTATACAA+TGG + chr8_3:58184221-58184240 None:intergenic 25.0%
! ATAGTCAATGATAGAGTTAA+AGG - chr8_3:58184584-58184603 Msa1297690:intron 25.0%
! AACAACACTACTATAGAAAT+TGG + chr8_3:58184772-58184791 None:intergenic 25.0%
! ATTGAAAACTCAAATTTGGT+CGG + chr8_3:58185106-58185125 None:intergenic 25.0%
! TGAGATTGAAAACTCAAATT+TGG + chr8_3:58185110-58185129 None:intergenic 25.0%
! TAACTACTATTCATTTCTGT+GGG + chr8_3:58185442-58185461 None:intergenic 25.0%
! TTAACTACTATTCATTTCTG+TGG + chr8_3:58185443-58185462 None:intergenic 25.0%
! ATAACCGTTTATTTGCATAT+AGG + chr8_3:58185775-58185794 None:intergenic 25.0%
! AAACAAACACATCCAAAATT+TGG + chr8_3:58186626-58186645 None:intergenic 25.0%
!!! AAGAACTGTCTTTTAAAGAA+AGG + chr8_3:58186867-58186886 None:intergenic 25.0%
!!! GTTTGTTTGGTTCTTTTAAT+TGG - chr8_3:58187107-58187126 Msa1297690:CDS 25.0%
!! TTTATATTCATGGGTTTGTT+TGG - chr8_3:58187227-58187246 Msa1297690:CDS 25.0%
!! TTTTTCTTTCTTTCTTCCTT+TGG - chr8_3:58187952-58187971 Msa1297690:exon 25.0%
TTTCTGTTACGTTAGATCTT+CGG - chr8_3:58182311-58182330 Msa1297690:three_prime_UTR 30.0%
!! ACCAGAAATAGCTTTAAAAG+CGG + chr8_3:58182451-58182470 None:intergenic 30.0%
! TAATAGTTCTGTTCCGAAAA+CGG - chr8_3:58182485-58182504 Msa1297690:three_prime_UTR 30.0%
! TCTAACTGAATAACCGTTTT+CGG + chr8_3:58182501-58182520 None:intergenic 30.0%
GGTAAGGGTAATATTGTAAA+TGG - chr8_3:58182573-58182592 Msa1297690:exon 30.0%
AATGTTCATAATGAGCTTCA+GGG - chr8_3:58183098-58183117 Msa1297690:intron 30.0%
AGAGAAAGAAGAAAAGTCTA+AGG - chr8_3:58183517-58183536 Msa1297690:intron 30.0%
ACGTGTATGTTATGAATGTT+GGG - chr8_3:58183756-58183775 Msa1297690:CDS 30.0%
TAAGCTTACTTCTTTAATGC+TGG + chr8_3:58184011-58184030 None:intergenic 30.0%
AAGCATTTCAGTTCACAAAA+AGG + chr8_3:58184050-58184069 None:intergenic 30.0%
TGCATATACCAACTCAATTA+TGG + chr8_3:58184196-58184215 None:intergenic 30.0%
TCATAAATTTCATCTGTAGC+TGG + chr8_3:58184292-58184311 None:intergenic 30.0%
! TGGAATATACAGTATTGAGA+TGG - chr8_3:58184315-58184334 Msa1297690:intron 30.0%
TTTGTAGTGATACATTCAAC+AGG - chr8_3:58184343-58184362 Msa1297690:intron 30.0%
!! TGTTATTTCTATCTGAAGGA+AGG + chr8_3:58184747-58184766 None:intergenic 30.0%
!! GGTATGTTATTTCTATCTGA+AGG + chr8_3:58184751-58184770 None:intergenic 30.0%
ACAGATAATCAACACAAACT+CGG + chr8_3:58184825-58184844 None:intergenic 30.0%
!! TGTGTTGATTATCTGTTTGA+TGG - chr8_3:58184829-58184848 Msa1297690:intron 30.0%
TATCTGTTTGATGGAAATCA+AGG - chr8_3:58184838-58184857 Msa1297690:intron 30.0%
! GATTTTACATTCCTTTTCTC+TGG + chr8_3:58185056-58185075 None:intergenic 30.0%
TTAAGGAAAAAGAGTTCATC+TGG - chr8_3:58185244-58185263 Msa1297690:intron 30.0%
! GTTGTATTTTTCTGTAGGTT+GGG + chr8_3:58185280-58185299 None:intergenic 30.0%
! AGTTGTATTTTTCTGTAGGT+TGG + chr8_3:58185281-58185300 None:intergenic 30.0%
! TTCATTTTCGTAAAAGCCTA+AGG + chr8_3:58185341-58185360 None:intergenic 30.0%
AACTACTATTCATTTCTGTG+GGG + chr8_3:58185441-58185460 None:intergenic 30.0%
!! TATTCCCACTTAGTTTGTTA+AGG - chr8_3:58185527-58185546 Msa1297690:CDS 30.0%
AGTGCCTATATGCAAATAAA+CGG - chr8_3:58185768-58185787 Msa1297690:intron 30.0%
ACAAATCTTGTCTAACATGA+TGG - chr8_3:58186165-58186184 Msa1297690:CDS 30.0%
ATTACGAAACATTTCCAGTA+CGG + chr8_3:58186228-58186247 None:intergenic 30.0%
CAGCTCTTCAATTAAATGTT+GGG + chr8_3:58186429-58186448 None:intergenic 30.0%
!! GACATACACAATTTGTTGAA+TGG - chr8_3:58186524-58186543 Msa1297690:CDS 30.0%
! TGTATCATTGTGCCAAATTT+TGG - chr8_3:58186611-58186630 Msa1297690:CDS 30.0%
TAATAGAAAAAAAGGCCACA+GGG + chr8_3:58186697-58186716 None:intergenic 30.0%
TTAATAGAAAAAAAGGCCAC+AGG + chr8_3:58186698-58186717 None:intergenic 30.0%
ACAAAAAAGAAAACAAGGGT+GGG + chr8_3:58186999-58187018 None:intergenic 30.0%
TACAAAAAAGAAAACAAGGG+TGG + chr8_3:58187000-58187019 None:intergenic 30.0%
!! TTTGTATCCATTGGTTTGTT+TGG - chr8_3:58187094-58187113 Msa1297690:CDS 30.0%
AAAAGAACCAAACAAACCAA+TGG + chr8_3:58187104-58187123 None:intergenic 30.0%
TTCGTCTGCATTTATATTCA+TGG - chr8_3:58187217-58187236 Msa1297690:CDS 30.0%
TCGTCTGCATTTATATTCAT+GGG - chr8_3:58187218-58187237 Msa1297690:CDS 30.0%
! CTAACTTTTCATTCTGTCTT+AGG - chr8_3:58187285-58187304 Msa1297690:CDS 30.0%
! TTTTCATTCTGTCTTAGGAT+GGG - chr8_3:58187290-58187309 Msa1297690:CDS 30.0%
ATTAGAGAATTCTGTAAGAG+TGG - chr8_3:58187405-58187424 Msa1297690:CDS 30.0%
!! AATGGATTTTCATGAATTGC+TGG - chr8_3:58187455-58187474 Msa1297690:CDS 30.0%
! TCATGATGATGTTACTGTTA+TGG - chr8_3:58187506-58187525 Msa1297690:CDS 30.0%
AAGCTATGACATCATCTTTA+GGG + chr8_3:58187640-58187659 None:intergenic 30.0%
AATTCCAGATCCATGAAAAA+TGG + chr8_3:58187673-58187692 None:intergenic 30.0%
CAACAAAAAAGTTAACTCCT+AGG - chr8_3:58187705-58187724 Msa1297690:CDS 30.0%
! CATTAAAATCTGAGATTCCT+AGG + chr8_3:58187725-58187744 None:intergenic 30.0%
! CTAGGAATCTCAGATTTTAA+TGG - chr8_3:58187723-58187742 Msa1297690:CDS 30.0%
! GGCTTATGGAAATTTTCTTT+AGG - chr8_3:58187788-58187807 Msa1297690:CDS 30.0%
ATAACTGCAAAAAAGATGGA+CGG + chr8_3:58187873-58187892 None:intergenic 30.0%
! ATATACACCGACATTTTACT+TGG + chr8_3:58187983-58188002 None:intergenic 30.0%
AGTAAAATGTCGGTGTATAT+TGG - chr8_3:58187983-58188002 Msa1297690:five_prime_UTR 30.0%
!! TACAAGTGTACTGATTTAAC+TGG - chr8_3:58188012-58188031 Msa1297690:five_prime_UTR 30.0%
CTAACTCTAATTTGATATGG+TGG + chr8_3:58188086-58188105 None:intergenic 30.0%
CACCATATCAAATTAGAGTT+AGG - chr8_3:58188084-58188103 Msa1297690:five_prime_UTR 30.0%
CTCCTAACTCTAATTTGATA+TGG + chr8_3:58188089-58188108 None:intergenic 30.0%
TAGAGTTAGGAGATTCAAAA+TGG - chr8_3:58188097-58188116 Msa1297690:five_prime_UTR 30.0%
TTACTACATCCCTAATGTGA+TGG - chr8_3:58182164-58182183 Msa1297690:three_prime_UTR 35.0%
TACTACATCCCTAATGTGAT+GGG - chr8_3:58182165-58182184 Msa1297690:three_prime_UTR 35.0%
!!! TGTCGGTTTTTTTGTTGTTC+CGG + chr8_3:58182236-58182255 None:intergenic 35.0%
AATAGTAACGTCTTGGTTGT+CGG + chr8_3:58182253-58182272 None:intergenic 35.0%
CAGTGAAAATAGTAACGTCT+TGG + chr8_3:58182260-58182279 None:intergenic 35.0%
GTAACAGAAAGAATGACCTA+GGG + chr8_3:58182301-58182320 None:intergenic 35.0%
! GTTTTCACCTACTCATGAAT+CGG - chr8_3:58182395-58182414 Msa1297690:three_prime_UTR 35.0%
AAAAGCGGTTTCACGAAAAT+CGG + chr8_3:58182436-58182455 None:intergenic 35.0%
!!! ACCGCTTTTAAAGCTATTTC+TGG - chr8_3:58182447-58182466 Msa1297690:three_prime_UTR 35.0%
AAAATGAGAGTAATGTGCAG+TGG - chr8_3:58182943-58182962 Msa1297690:intron 35.0%
AAATGAGAGTAATGTGCAGT+GGG - chr8_3:58182944-58182963 Msa1297690:intron 35.0%
! TTGTTTGTTGGGATTTACGA+CGG - chr8_3:58183026-58183045 Msa1297690:intron 35.0%
GAAGCTCATTATGAACATTG+CGG + chr8_3:58183097-58183116 None:intergenic 35.0%
CAATGTTCATAATGAGCTTC+AGG - chr8_3:58183097-58183116 Msa1297690:intron 35.0%
! AGAAAATTCAGGTTCTGGTT+TGG - chr8_3:58183184-58183203 Msa1297690:intron 35.0%
ATGGTACAACAGACTGAAAT+TGG - chr8_3:58183212-58183231 Msa1297690:intron 35.0%
! AAGATGGACTTGATCTTTCT+GGG - chr8_3:58183297-58183316 Msa1297690:intron 35.0%
! TGATGGTTTGCCAAAACATA+AGG - chr8_3:58183448-58183467 Msa1297690:intron 35.0%
AAGTTGTTACCGTGGAATTT+GGG - chr8_3:58183485-58183504 Msa1297690:intron 35.0%
GAAAGAAGAAAAGTCTAAGG+TGG - chr8_3:58183520-58183539 Msa1297690:intron 35.0%
AAAACCAAATCATGATCCAC+CGG + chr8_3:58183605-58183624 None:intergenic 35.0%
ACTTGCGTATTTGGATATGA+CGG - chr8_3:58183658-58183677 Msa1297690:intron 35.0%
! AAATCCTGAACTTGCTTTGA+TGG - chr8_3:58183697-58183716 Msa1297690:CDS 35.0%
! AATCCTGAACTTGCTTTGAT+GGG - chr8_3:58183698-58183717 Msa1297690:CDS 35.0%
!!! TCTGTTGGTTGTTTTGATGA+GGG - chr8_3:58183727-58183746 Msa1297690:CDS 35.0%
GACGTGTATGTTATGAATGT+TGG - chr8_3:58183755-58183774 Msa1297690:CDS 35.0%
CGTGTATGTTATGAATGTTG+GGG - chr8_3:58183757-58183776 Msa1297690:CDS 35.0%
! TTGAGTTCCATCTAAAGCAA+AGG + chr8_3:58183903-58183922 None:intergenic 35.0%
TCAAACTGAAACCACAATCA+AGG - chr8_3:58183919-58183938 Msa1297690:CDS 35.0%
AGGCAACAATTGAAATGATG+AGG + chr8_3:58184122-58184141 None:intergenic 35.0%
TCATCATTTCAATTGTTGCC+TGG - chr8_3:58184121-58184140 Msa1297690:intron 35.0%
CAAACTCAAGAAGTTAAACC+AGG + chr8_3:58184142-58184161 None:intergenic 35.0%
TAAACAGTTCACAACATGAC+AGG + chr8_3:58184471-58184490 None:intergenic 35.0%
! TCTATCATTGACTATGCAAC+GGG + chr8_3:58184579-58184598 None:intergenic 35.0%
! CTCTATCATTGACTATGCAA+CGG + chr8_3:58184580-58184599 None:intergenic 35.0%
TAGAGTTAAAGGTCGTCTTA+AGG - chr8_3:58184595-58184614 Msa1297690:intron 35.0%
ATTTGAATAAAACGTGCACC+TGG - chr8_3:58184905-58184924 Msa1297690:intron 35.0%
! TACATTCCTTTTCTCTGGTT+TGG + chr8_3:58185051-58185070 None:intergenic 35.0%
GAAGTGGTATGTAAGACATT+GGG + chr8_3:58185208-58185227 None:intergenic 35.0%
AGAAGTGGTATGTAAGACAT+TGG + chr8_3:58185209-58185228 None:intergenic 35.0%
TCTTACATACCACTTCTGTT+AGG - chr8_3:58185212-58185231 Msa1297690:intron 35.0%
! TAAAAGCCTAAGGTACTCAA+AGG + chr8_3:58185331-58185350 None:intergenic 35.0%
CAAGCCTTAACAAACTAAGT+GGG + chr8_3:58185534-58185553 None:intergenic 35.0%
TTCTCAGTCAGAATTGAAAG+AGG - chr8_3:58186007-58186026 Msa1297690:intron 35.0%
TGATTATGAAGTCATGTGAC+AGG + chr8_3:58186045-58186064 None:intergenic 35.0%
TTCATGGAAAAGTTTCCAGA+CGG - chr8_3:58186395-58186414 Msa1297690:CDS 35.0%
TCTTCAATTAAATGTTGGGC+AGG + chr8_3:58186425-58186444 None:intergenic 35.0%
GCAGCTCTTCAATTAAATGT+TGG + chr8_3:58186430-58186449 None:intergenic 35.0%
ATCCAATTTACCAGCTTTCT+TGG + chr8_3:58186465-58186484 None:intergenic 35.0%
ACAGTGAAAGAATAAACTGC+TGG - chr8_3:58186659-58186678 Msa1297690:CDS 35.0%
! CATAATTATTTGAGGCTCTG+AGG + chr8_3:58186729-58186748 None:intergenic 35.0%
!!! TTGATTCTAGAGTTTTGCTG+AGG - chr8_3:58187031-58187050 Msa1297690:CDS 35.0%
TTGTCTGCATTTGTATCCAT+TGG - chr8_3:58187085-58187104 Msa1297690:CDS 35.0%
! CTTTTCATTTTGCCTGAGTT+TGG - chr8_3:58187157-58187176 Msa1297690:CDS 35.0%
!! CAAGTTAAAAAGTGCCATCT+CGG + chr8_3:58187183-58187202 None:intergenic 35.0%
!!! GAGATGGCACTTTTTAACTT+GGG - chr8_3:58187182-58187201 Msa1297690:CDS 35.0%
! CTTTTCATTCTGTCTTAGGA+TGG - chr8_3:58187289-58187308 Msa1297690:CDS 35.0%
TTTCATTCTGTCTTAGGATG+GGG - chr8_3:58187291-58187310 Msa1297690:CDS 35.0%
GTTATGGTGATATCACTTGA+AGG - chr8_3:58187522-58187541 Msa1297690:CDS 35.0%
TATCACTTGAAGGAAGAATC+TGG - chr8_3:58187532-58187551 Msa1297690:CDS 35.0%
! TGACAACAATTTTTCCACCT+GGG - chr8_3:58187610-58187629 Msa1297690:CDS 35.0%
GAAGCTATGACATCATCTTT+AGG + chr8_3:58187641-58187660 None:intergenic 35.0%
!! TGATCCATTTTTCATGGATC+TGG - chr8_3:58187666-58187685 Msa1297690:CDS 35.0%
!!! AACTTTTTTGTTGCAACACC+AGG + chr8_3:58187698-58187717 None:intergenic 35.0%
!! TCTCAGATTTTAATGGCAAG+AGG - chr8_3:58187730-58187749 Msa1297690:CDS 35.0%
! ATGGAAATTTTCTTTAGGCG+TGG - chr8_3:58187793-58187812 Msa1297690:CDS 35.0%
TAACTGCAAAAAAGATGGAC+GGG + chr8_3:58187872-58187891 None:intergenic 35.0%
! ATAGAAATTTTGCACAGCGA+AGG - chr8_3:58187908-58187927 Msa1297690:CDS 35.0%
AAAATGTCGGTGTATATTGG+TGG - chr8_3:58187986-58188005 Msa1297690:five_prime_UTR 35.0%
AAATGTCGGTGTATATTGGT+GGG - chr8_3:58187987-58188006 Msa1297690:five_prime_UTR 35.0%
GAAATATGACAATCTGTAGC+CGG - chr8_3:58188050-58188069 Msa1297690:five_prime_UTR 35.0%
AAATATGACAATCTGTAGCC+GGG - chr8_3:58188051-58188070 Msa1297690:five_prime_UTR 35.0%
TTAGGAGATTCAAAATGGAG+AGG - chr8_3:58188102-58188121 Msa1297690:five_prime_UTR 35.0%
AGGGAAGAAGAGTGAAGTAA+GGG + chr8_3:58182074-58182093 None:intergenic 40.0%
! GTTGTGTTCTTGTTTCGAAC+CGG - chr8_3:58182203-58182222 Msa1297690:three_prime_UTR 40.0%
TGACCTAGGGTTTCATCTAA+CGG + chr8_3:58182288-58182307 None:intergenic 40.0%
CGTAACAGAAAGAATGACCT+AGG + chr8_3:58182302-58182321 None:intergenic 40.0%
AACCGAAGAGAAGTAGATTC+CGG + chr8_3:58182378-58182397 None:intergenic 40.0%
! CTAAGAACCGATTCATGAGT+AGG + chr8_3:58182405-58182424 None:intergenic 40.0%
AAAGCGGTTTCACGAAAATC+GGG + chr8_3:58182435-58182454 None:intergenic 40.0%
TCAAAAAACTCACCACCTCT+CGG + chr8_3:58182645-58182664 None:intergenic 40.0%
!!! AGAGGTGGTGAGTTTTTTGA+GGG - chr8_3:58182645-58182664 Msa1297690:CDS 40.0%
!! GGTTTAGGAAGGCATTTCAA+CGG - chr8_3:58182823-58182842 Msa1297690:intron 40.0%
!! ATTTCAACGGAAGGTGTCTT+CGG - chr8_3:58182836-58182855 Msa1297690:intron 40.0%
!! TGCCGGTGTTGAATTTTGTT+GGG - chr8_3:58182880-58182899 Msa1297690:intron 40.0%
CTCCCAACAAAATTCAACAC+CGG + chr8_3:58182885-58182904 None:intergenic 40.0%
! GAATTTTGTTGGGAGGAAAG+AGG - chr8_3:58182890-58182909 Msa1297690:intron 40.0%
!! GGGATTTACGACGGTTTTAA+TGG - chr8_3:58183035-58183054 Msa1297690:intron 40.0%
!! TTACGACGGTTTTAATGGAC+CGG - chr8_3:58183040-58183059 Msa1297690:intron 40.0%
ATCAAAAACTCAGGTGCATC+CGG + chr8_3:58183062-58183081 None:intergenic 40.0%
! GATGCACCTGAGTTTTTGAT+GGG - chr8_3:58183062-58183081 Msa1297690:intron 40.0%
! ATGCACCTGAGTTTTTGATG+GGG - chr8_3:58183063-58183082 Msa1297690:intron 40.0%
ATATGCCCCATCAAAAACTC+AGG + chr8_3:58183071-58183090 None:intergenic 40.0%
!! ATGAGCTTCAGGGTTTGTTT+TGG - chr8_3:58183108-58183127 Msa1297690:intron 40.0%
!! TGAGCTTCAGGGTTTGTTTT+GGG - chr8_3:58183109-58183128 Msa1297690:intron 40.0%
TTGGGAACTTGATGAACCAA+TGG - chr8_3:58183127-58183146 Msa1297690:intron 40.0%
GAAAAGGAGGGAGAAAATTC+AGG - chr8_3:58183173-58183192 Msa1297690:intron 40.0%
!! AGGTTCTGGTTTGGTGAATA+TGG - chr8_3:58183193-58183212 Msa1297690:intron 40.0%
ACAACAGACTGAAATTGGAC+CGG - chr8_3:58183217-58183236 Msa1297690:intron 40.0%
GAAAGATCAAGTCCATCTTC+AGG + chr8_3:58183296-58183315 None:intergenic 40.0%
! GAAGATGGACTTGATCTTTC+TGG - chr8_3:58183296-58183315 Msa1297690:intron 40.0%
GAACGGTTTGTCAAAGCATA+AGG - chr8_3:58183421-58183440 Msa1297690:intron 40.0%
GGTTTGTCAAAGCATAAGGA+GGG - chr8_3:58183425-58183444 Msa1297690:intron 40.0%
! TGGTTTGCCAAAACATAAGG+AGG - chr8_3:58183451-58183470 Msa1297690:intron 40.0%
GGTTTGCCAAAACATAAGGA+GGG - chr8_3:58183452-58183471 Msa1297690:intron 40.0%
! CCATTACCCTCCTTATGTTT+TGG + chr8_3:58183461-58183480 None:intergenic 40.0%
CCAAAACATAAGGAGGGTAA+TGG - chr8_3:58183458-58183477 Msa1297690:intron 40.0%
! AACATAAGGAGGGTAATGGT+AGG - chr8_3:58183462-58183481 Msa1297690:intron 40.0%
GAAGTTGTTACCGTGGAATT+TGG - chr8_3:58183484-58183503 Msa1297690:intron 40.0%
AGTTGTTACCGTGGAATTTG+GGG - chr8_3:58183486-58183505 Msa1297690:intron 40.0%
!!! TGGTTTTGAATGCAATGTCG+CGG - chr8_3:58183618-58183637 Msa1297690:intron 40.0%
AGTGACAGAACTTGCGTATT+TGG - chr8_3:58183649-58183668 Msa1297690:intron 40.0%
!! TTTGATGGGTTCATGTCTGT+TGG - chr8_3:58183712-58183731 Msa1297690:CDS 40.0%
!!! GTCTGTTGGTTGTTTTGATG+AGG - chr8_3:58183726-58183745 Msa1297690:CDS 40.0%
AATGTGGAATCTGCAAGCAA+GGG - chr8_3:58183833-58183852 Msa1297690:CDS 40.0%
! GAAGAGTCCTTTGCTTTAGA+TGG - chr8_3:58183893-58183912 Msa1297690:CDS 40.0%
ACTGAAACCACAATCAAGGT+CGG - chr8_3:58183923-58183942 Msa1297690:CDS 40.0%
TTCTGCTCAAGAAATGAGGT+TGG - chr8_3:58183955-58183974 Msa1297690:intron 40.0%
GTGTGTGTCCATAATTGAGT+TGG - chr8_3:58184185-58184204 Msa1297690:intron 40.0%
GCTAAGTGCATTGTATTCCT+AGG - chr8_3:58184234-58184253 Msa1297690:intron 40.0%
AAGTGCATTGTATTCCTAGG+AGG - chr8_3:58184237-58184256 Msa1297690:intron 40.0%
AGTGCATTGTATTCCTAGGA+GGG - chr8_3:58184238-58184257 Msa1297690:intron 40.0%
! CTATCATTGACTATGCAACG+GGG + chr8_3:58184578-58184597 None:intergenic 40.0%
! TTAAGGTCACCAGAGCATTT+GGG - chr8_3:58184612-58184631 Msa1297690:intron 40.0%
TATCTGAAGGAAGGAGAGAA+TGG + chr8_3:58184738-58184757 None:intergenic 40.0%
AAGATTGCTGGAATAGAGAG+AGG + chr8_3:58185155-58185174 None:intergenic 40.0%
CTGTTAGGTCTACTAGGTTA+AGG - chr8_3:58185227-58185246 Msa1297690:intron 40.0%
CCAAGCCTTAACAAACTAAG+TGG + chr8_3:58185535-58185554 None:intergenic 40.0%
!! CCACTTAGTTTGTTAAGGCT+TGG - chr8_3:58185532-58185551 Msa1297690:CDS 40.0%
TCTGACTGAGAATGCAAAAG+AGG + chr8_3:58185999-58186018 None:intergenic 40.0%
AGTACGGCATCATTCAACTT+CGG + chr8_3:58186212-58186231 None:intergenic 40.0%
AAGGGAAGCAGGATATGTAT+GGG + chr8_3:58186268-58186287 None:intergenic 40.0%
! ATCTATGGTGACGTACTGAA+GGG + chr8_3:58186286-58186305 None:intergenic 40.0%
! AATCTATGGTGACGTACTGA+AGG + chr8_3:58186287-58186306 None:intergenic 40.0%
TCACCATAGATTAAGCCCAA+GGG - chr8_3:58186295-58186314 Msa1297690:CDS 40.0%
GATACAAACCATCAGATGAG+AGG + chr8_3:58186334-58186353 None:intergenic 40.0%
!! TTCTCAAGTTGAGAGCTTCA+TGG - chr8_3:58186379-58186398 Msa1297690:CDS 40.0%
AGCCAAGAAAGCTGGTAAAT+TGG - chr8_3:58186460-58186479 Msa1297690:CDS 40.0%
!! CACAATTTGTTGAATGGTGC+AGG - chr8_3:58186530-58186549 Msa1297690:CDS 40.0%
!! AATTTGTTGAATGGTGCAGG+TGG - chr8_3:58186533-58186552 Msa1297690:CDS 40.0%
GCTACAAATAATCAAAGCGC+TGG + chr8_3:58186817-58186836 None:intergenic 40.0%
! TGAGGTGACGGTGTTAATTT+GGG - chr8_3:58187049-58187068 Msa1297690:CDS 40.0%
!! CGAGATGGCACTTTTTAACT+TGG - chr8_3:58187181-58187200 Msa1297690:CDS 40.0%
!!! TGGCACTTTTTAACTTGGGA+TGG - chr8_3:58187186-58187205 Msa1297690:CDS 40.0%
ATGACAGACTCAATTGTTGC+AGG - chr8_3:58187432-58187451 Msa1297690:CDS 40.0%
AGACTCAATTGTTGCAGGAA+TGG - chr8_3:58187437-58187456 Msa1297690:CDS 40.0%
GAAGAATCTGGAAATCGTCA+GGG - chr8_3:58187544-58187563 Msa1297690:CDS 40.0%
! GTGACAACAATTTTTCCACC+TGG - chr8_3:58187609-58187628 Msa1297690:CDS 40.0%
!! CACAGCTGATCCATTTTTCA+TGG - chr8_3:58187660-58187679 Msa1297690:CDS 40.0%
!! TCATGGATCTGGAATTTTCC+TGG - chr8_3:58187677-58187696 Msa1297690:CDS 40.0%
! ATTTTACTTGGCTCAGCCAA+AGG + chr8_3:58187971-58187990 None:intergenic 40.0%
AATGTCGGTGTATATTGGTG+GGG - chr8_3:58187988-58188007 Msa1297690:five_prime_UTR 40.0%
AATATGACAATCTGTAGCCG+GGG - chr8_3:58188052-58188071 Msa1297690:five_prime_UTR 40.0%
GAGGGAAGAAGAGTGAAGTA+AGG + chr8_3:58182075-58182094 None:intergenic 45.0%
TCCAATCCGAAAGGGACAAA+GGG + chr8_3:58182107-58182126 None:intergenic 45.0%
! TTGTTGTTCCGGTGTTGAAC+CGG + chr8_3:58182225-58182244 None:intergenic 45.0%
GAACCGTTAGATGAAACCCT+AGG - chr8_3:58182282-58182301 Msa1297690:three_prime_UTR 45.0%
CACCGGAATCTACTTCTCTT+CGG - chr8_3:58182373-58182392 Msa1297690:three_prime_UTR 45.0%
!!! GAGAGGTGGTGAGTTTTTTG+AGG - chr8_3:58182644-58182663 Msa1297690:CDS 45.0%
!!! GAGGTGGTGAGTTTTTTGAG+GGG - chr8_3:58182646-58182665 Msa1297690:CDS 45.0%
!! GGGAGTGGTTATTTTCTCTC+CGG - chr8_3:58182666-58182685 Msa1297690:CDS 45.0%
CGGAAGAGATGTTCCATTCT+CGG - chr8_3:58182758-58182777 Msa1297690:intron 45.0%
CTTCCATACATCCCTCCTAA+CGG + chr8_3:58182786-58182805 None:intergenic 45.0%
GGGATGTATGGAAGGAAGAA+AGG - chr8_3:58182792-58182811 Msa1297690:intron 45.0%
! GAAGGAAGAAAGGTGTGTCA+GGG - chr8_3:58182802-58182821 Msa1297690:intron 45.0%
! AGAAAGGTGTGTCAGGGTTT+AGG - chr8_3:58182808-58182827 Msa1297690:intron 45.0%
!! TAGGAAGGCATTTCAACGGA+AGG - chr8_3:58182827-58182846 Msa1297690:intron 45.0%
!! GTGCCGGTGTTGAATTTTGT+TGG - chr8_3:58182879-58182898 Msa1297690:intron 45.0%
!! CGGTGTTGAATTTTGTTGGG+AGG - chr8_3:58182883-58182902 Msa1297690:intron 45.0%
! GGATGCACCTGAGTTTTTGA+TGG - chr8_3:58183061-58183080 Msa1297690:intron 45.0%
! GAGGGAGAAAATTCAGGTTC+TGG - chr8_3:58183179-58183198 Msa1297690:intron 45.0%
! GCGTAGGTTGTGGGAATTTT+TGG - chr8_3:58183262-58183281 Msa1297690:intron 45.0%
TTGGCTGAAGATCCTGAAGA+TGG - chr8_3:58183281-58183300 Msa1297690:intron 45.0%
TGGACTTGATCTTTCTGGGT+CGG - chr8_3:58183301-58183320 Msa1297690:intron 45.0%
TTGATCTTTCTGGGTCGGAT+AGG - chr8_3:58183306-58183325 Msa1297690:intron 45.0%
AGTGTTAGCAATGCCAATGC+AGG - chr8_3:58183356-58183375 Msa1297690:intron 45.0%
TAGCAATGCCAATGCAGGTT+CGG - chr8_3:58183361-58183380 Msa1297690:intron 45.0%
TTGCTGTCCAGACTGAAGAA+CGG - chr8_3:58183404-58183423 Msa1297690:intron 45.0%
TGACAAACCGTTCTTCAGTC+TGG + chr8_3:58183414-58183433 None:intergenic 45.0%
CGGTTTGTCAAAGCATAAGG+AGG - chr8_3:58183424-58183443 Msa1297690:intron 45.0%
TCAAAGCATAAGGAGGGTGA+TGG - chr8_3:58183431-58183450 Msa1297690:intron 45.0%
ATGGTAGGAAGTTGTTACCG+TGG - chr8_3:58183477-58183496 Msa1297690:intron 45.0%
TCCTGATTCCCCAAATTCCA+CGG + chr8_3:58183497-58183516 None:intergenic 45.0%
GAAAACAAACCCTCTGCTTC+TGG - chr8_3:58183542-58183561 Msa1297690:intron 45.0%
!!! GGTTTTGAATGCAATGTCGC+GGG - chr8_3:58183619-58183638 Msa1297690:intron 45.0%
! GGATATGACGGAAAAGCTTC+TGG - chr8_3:58183670-58183689 Msa1297690:intron 45.0%
GAACCCATCAAAGCAAGTTC+AGG + chr8_3:58183704-58183723 None:intergenic 45.0%
!!! GGTTGTTTTGATGAGGGATG+AGG - chr8_3:58183733-58183752 Msa1297690:CDS 45.0%
TGTAGCACATTATGAGCCCA+AGG - chr8_3:58183793-58183812 Msa1297690:CDS 45.0%
CTTGCTTGCAGATTCCACAT+TGG + chr8_3:58183834-58183853 None:intergenic 45.0%
CAATGTGGAATCTGCAAGCA+AGG - chr8_3:58183832-58183851 Msa1297690:CDS 45.0%
TTCAACTATGCTCTCACTGC+TGG + chr8_3:58183876-58183895 None:intergenic 45.0%
ACAATCAAGGTCGGCAATGA+GGG - chr8_3:58183932-58183951 Msa1297690:intron 45.0%
AGGGTTCTGCTCAAGAAATG+AGG - chr8_3:58183951-58183970 Msa1297690:intron 45.0%
TGCTCAAGAAATGAGGTTGG+CGG - chr8_3:58183958-58183977 Msa1297690:intron 45.0%
! CTTCTTTAATGCTGGTGCTG+TGG + chr8_3:58184003-58184022 None:intergenic 45.0%
GTAACAATAGCTTCCCTCCT+AGG + chr8_3:58184254-58184273 None:intergenic 45.0%
! CTTAAGGTCACCAGAGCATT+TGG - chr8_3:58184611-58184630 Msa1297690:intron 45.0%
! TAAGGTCACCAGAGCATTTG+GGG - chr8_3:58184613-58184632 Msa1297690:intron 45.0%
! TTGGGGCAGGATCTTTGAAA+AGG - chr8_3:58184630-58184649 Msa1297690:intron 45.0%
! TGGGGCAGGATCTTTGAAAA+GGG - chr8_3:58184631-58184650 Msa1297690:intron 45.0%
GAAGGAAGGAGAGAATGGTT+CGG + chr8_3:58184733-58184752 None:intergenic 45.0%
GTTCATGACTTCATGCACTG+CGG - chr8_3:58184789-58184808 Msa1297690:intron 45.0%
TTCATGACTTCATGCACTGC+GGG - chr8_3:58184790-58184809 Msa1297690:intron 45.0%
CAGCACTATATTGCGATGCA+GGG + chr8_3:58184997-58185016 None:intergenic 45.0%
TCTGTGCCAAACCAGAGAAA+AGG - chr8_3:58185042-58185061 Msa1297690:intron 45.0%
CCTAGTAGACCTAACAGAAG+TGG + chr8_3:58185224-58185243 None:intergenic 45.0%
CCACTTCTGTTAGGTCTACT+AGG - chr8_3:58185221-58185240 Msa1297690:intron 45.0%
AGAGTTCATCTGGACTGCTA+AGG - chr8_3:58185254-58185273 Msa1297690:intron 45.0%
GTTGAGCCTTTGAGTACCTT+AGG - chr8_3:58185322-58185341 Msa1297690:intron 45.0%
! ACAGAGGTATAGCACATTGC+GGG + chr8_3:58185683-58185702 None:intergenic 45.0%
! GACAGAGGTATAGCACATTG+CGG + chr8_3:58185684-58185703 None:intergenic 45.0%
GCAATGTGCTATACCTCTGT+CGG - chr8_3:58185683-58185702 Msa1297690:intron 45.0%
!!! TGCTATACCTCTGTCGGTTT+TGG - chr8_3:58185689-58185708 Msa1297690:intron 45.0%
!!! GCTATACCTCTGTCGGTTTT+GGG - chr8_3:58185690-58185709 Msa1297690:intron 45.0%
!!! CTATACCTCTGTCGGTTTTG+GGG - chr8_3:58185691-58185710 Msa1297690:intron 45.0%
TACAATGCAGCTGTCAATCC+CGG + chr8_3:58185738-58185757 None:intergenic 45.0%
GAAGTTGAATGATGCCGTAC+TGG - chr8_3:58186211-58186230 Msa1297690:CDS 45.0%
AGGGAAGCAGGATATGTATG+GGG + chr8_3:58186267-58186286 None:intergenic 45.0%
GAAGGGAAGCAGGATATGTA+TGG + chr8_3:58186269-58186288 None:intergenic 45.0%
GTCACCATAGATTAAGCCCA+AGG - chr8_3:58186294-58186313 Msa1297690:CDS 45.0%
GATCCCTTGGGCTTAATCTA+TGG + chr8_3:58186301-58186320 None:intergenic 45.0%
TTCCTGATCCTCTCATCTGA+TGG - chr8_3:58186323-58186342 Msa1297690:CDS 45.0%
AACCATCAGATGAGAGGATC+AGG + chr8_3:58186328-58186347 None:intergenic 45.0%
TTGGCACAATGATACAGAGC+AGG + chr8_3:58186607-58186626 None:intergenic 45.0%
TTTCCATTCCCTTGAGCTTC+TGG - chr8_3:58186790-58186809 Msa1297690:CDS 45.0%
! CTAGAGTTTTGCTGAGGTGA+CGG - chr8_3:58187037-58187056 Msa1297690:CDS 45.0%
! CTGAGGTGACGGTGTTAATT+TGG - chr8_3:58187048-58187067 Msa1297690:CDS 45.0%
! GTGACGGTGTTAATTTGGGA+TGG - chr8_3:58187053-58187072 Msa1297690:CDS 45.0%
GAATTGCTGGATATTCCGCA+AGG - chr8_3:58187468-58187487 Msa1297690:CDS 45.0%
TGGATATTCCGCAAGGAGAT+CGG - chr8_3:58187475-58187494 Msa1297690:CDS 45.0%
GGAAGAATCTGGAAATCGTC+AGG - chr8_3:58187543-58187562 Msa1297690:CDS 45.0%
TCGTCAGGGAAATATCTGTG+AGG - chr8_3:58187558-58187577 Msa1297690:CDS 45.0%
! TGAGGCGTTCAACTTTCTGT+TGG - chr8_3:58187576-58187595 Msa1297690:CDS 45.0%
!! ATCATCTTTAGGGCAATCCC+AGG + chr8_3:58187630-58187649 None:intergenic 45.0%
GGCTGAGCCAAGTAAAATGT+CGG - chr8_3:58187973-58187992 Msa1297690:five_prime_UTR 45.0%
ATATGACAATCTGTAGCCGG+GGG - chr8_3:58188053-58188072 Msa1297690:five_prime_UTR 45.0%
!! TATATTATATTTATTTGATT+AGG + chr8_3:58185404-58185423 None:intergenic 5.0%
!! TATATTATATTTATTTGATT+AGG + chr8_3:58185404-58185423 None:intergenic 5.0%
!! AAAATTTAAAAAAAATAGAA+AGG + chr8_3:58187935-58187954 None:intergenic 5.0%
CCAATCCGAAAGGGACAAAG+GGG + chr8_3:58182106-58182125 None:intergenic 50.0%
GTCCAATCCGAAAGGGACAA+AGG + chr8_3:58182108-58182127 None:intergenic 50.0%
! GTCCCTTTCGGATTGGACTT+AGG - chr8_3:58182110-58182129 Msa1297690:three_prime_UTR 50.0%
CGCCTAAGTCCAATCCGAAA+GGG + chr8_3:58182115-58182134 None:intergenic 50.0%
! CCTTTCGGATTGGACTTAGG+CGG - chr8_3:58182113-58182132 Msa1297690:three_prime_UTR 50.0%
! ATCCCTAATGTGATGGGAGC+TGG - chr8_3:58182171-58182190 Msa1297690:three_prime_UTR 50.0%
CTCCAGCTCCCATCACATTA+GGG + chr8_3:58182176-58182195 None:intergenic 50.0%
ACTCCAGCTCCCATCACATT+AGG + chr8_3:58182177-58182196 None:intergenic 50.0%
! GTTTCGAACCGGTTCAACAC+CGG - chr8_3:58182214-58182233 Msa1297690:three_prime_UTR 50.0%
GTTACGTTAGATCTTCGGCC+AGG - chr8_3:58182316-58182335 Msa1297690:three_prime_UTR 50.0%
GTGAGTCGGAGAAAGAAACC+TGG + chr8_3:58182337-58182356 None:intergenic 50.0%
AGAAAGCGATCGGAGTGAGT+CGG + chr8_3:58182351-58182370 None:intergenic 50.0%
TTCCGGTGAGAGAAAGCGAT+CGG + chr8_3:58182361-58182380 None:intergenic 50.0%
GGTTTCACGAAAATCGGGTC+GGG + chr8_3:58182430-58182449 None:intergenic 50.0%
CGGTTTCACGAAAATCGGGT+CGG + chr8_3:58182431-58182450 None:intergenic 50.0%
!! TGTGGTGGCGATTTTGTCAC+CGG - chr8_3:58182552-58182571 Msa1297690:three_prime_UTR 50.0%
! TGGCGATTTTGTCACCGGTA+AGG - chr8_3:58182557-58182576 Msa1297690:exon 50.0%
! GGCGATTTTGTCACCGGTAA+GGG - chr8_3:58182558-58182577 Msa1297690:exon 50.0%
!!! GGTGAGTTTTTTGAGGGGAG+TGG - chr8_3:58182651-58182670 Msa1297690:CDS 50.0%
CGTTAGGAGGGATGTATGGA+AGG - chr8_3:58182784-58182803 Msa1297690:intron 50.0%
! GGAAGGAAGAAAGGTGTGTC+AGG - chr8_3:58182801-58182820 Msa1297690:intron 50.0%
AGGTGTGTCAGGGTTTAGGA+AGG - chr8_3:58182812-58182831 Msa1297690:intron 50.0%
AGGTGTCTTCGGAGAAGAAG+CGG - chr8_3:58182847-58182866 Msa1297690:intron 50.0%
TGTTGGGAGGAAAGAGGTTC+CGG - chr8_3:58182896-58182915 Msa1297690:intron 50.0%
AGTAATGTGCAGTGGGCGTT+AGG - chr8_3:58182951-58182970 Msa1297690:intron 50.0%
GTAATGTGCAGTGGGCGTTA+GGG - chr8_3:58182952-58182971 Msa1297690:intron 50.0%
TCGGGTTCATGTGGTGGTTT+CGG - chr8_3:58182989-58183008 Msa1297690:intron 50.0%
AGCAGGGGTGGTTGTTTGTT+GGG - chr8_3:58183015-58183034 Msa1297690:intron 50.0%
ACGGGGTTATGACTCTCCAT+TGG + chr8_3:58183146-58183165 None:intergenic 50.0%
TAACCCCGTTGAGGTGGAAA+AGG - chr8_3:58183157-58183176 Msa1297690:intron 50.0%
! TCCCTCCTTTTCCACCTCAA+CGG + chr8_3:58183165-58183184 None:intergenic 50.0%
ACTGAAATTGGACCGGCTGT+GGG - chr8_3:58183224-58183243 Msa1297690:intron 50.0%
CTGTGGGAACGGAGAGTAAA+CGG - chr8_3:58183240-58183259 Msa1297690:intron 50.0%
AGAGTAAACGGCGTAGGTTG+TGG - chr8_3:58183252-58183271 Msa1297690:intron 50.0%
GAGTAAACGGCGTAGGTTGT+GGG - chr8_3:58183253-58183272 Msa1297690:intron 50.0%
ACCGTGGAATTTGGGGAATC+AGG - chr8_3:58183493-58183512 Msa1297690:intron 50.0%
AGCACATTATGAGCCCAAGG+AGG - chr8_3:58183796-58183815 Msa1297690:CDS 50.0%
TTATGAGCCCAAGGAGGATC+AGG - chr8_3:58183802-58183821 Msa1297690:CDS 50.0%
TATGAGCCCAAGGAGGATCA+GGG - chr8_3:58183803-58183822 Msa1297690:CDS 50.0%
! GAAGTACCCTGATCCTCCTT+GGG + chr8_3:58183812-58183831 None:intergenic 50.0%
! GGATCAGGGTACTTCCAATG+TGG - chr8_3:58183817-58183836 Msa1297690:CDS 50.0%
AGCAAGGGAGATGTTCGTGT+TGG - chr8_3:58183848-58183867 Msa1297690:CDS 50.0%
CTCATTGCCGACCTTGATTG+TGG + chr8_3:58183933-58183952 None:intergenic 50.0%
CACAATCAAGGTCGGCAATG+AGG - chr8_3:58183931-58183950 Msa1297690:intron 50.0%
ACTATGCAACGGGGATCATC+AGG + chr8_3:58184569-58184588 None:intergenic 50.0%
ACGTGCACCTGGTCTAATAG+CGG - chr8_3:58184916-58184935 Msa1297690:intron 50.0%
GCAGCACTATATTGCGATGC+AGG + chr8_3:58184998-58185017 None:intergenic 50.0%
GCATCGCAATATAGTGCTGC+AGG - chr8_3:58184998-58185017 Msa1297690:intron 50.0%
CTGGAATAGAGAGAGGCAGT+GGG + chr8_3:58185148-58185167 None:intergenic 50.0%
TGCACAGCTGCAAAGATTGC+TGG + chr8_3:58185167-58185186 None:intergenic 50.0%
GCAATCTTTGCAGCTGTGCA+AGG - chr8_3:58185167-58185186 Msa1297690:intron 50.0%
!! GTGCAAGGACTAGTTGTGTG+CGG - chr8_3:58185182-58185201 Msa1297690:intron 50.0%
GGATCAGGAACTGATCCCTT+GGG + chr8_3:58186313-58186332 None:intergenic 50.0%
AGGATCAGGAACTGATCCCT+TGG + chr8_3:58186314-58186333 None:intergenic 50.0%
TACCAGCTTTCTTGGCTGCA+CGG + chr8_3:58186457-58186476 None:intergenic 50.0%
TGTTGAATGGTGCAGGTGGA+TGG - chr8_3:58186537-58186556 Msa1297690:CDS 50.0%
! TGGTGAAGCTTTTGTCCCTG+TGG - chr8_3:58186679-58186698 Msa1297690:CDS 50.0%
ATATTCCGCAAGGAGATCGG+AGG - chr8_3:58187478-58187497 Msa1297690:CDS 50.0%
TACTTCCTCCGATCTCCTTG+CGG + chr8_3:58187486-58187505 None:intergenic 50.0%
!! ATCTTTAGGGCAATCCCAGG+TGG + chr8_3:58187627-58187646 None:intergenic 50.0%
CTTCCTTAGACATCGCAGAC+AGG - chr8_3:58187767-58187786 Msa1297690:CDS 50.0%
AAGCCTGTCTGCGATGTCTA+AGG + chr8_3:58187773-58187792 None:intergenic 50.0%
AGACATCGCAGACAGGCTTA+TGG - chr8_3:58187774-58187793 Msa1297690:CDS 50.0%
GCAAAAAAGATGGACGGGTG+CGG + chr8_3:58187867-58187886 None:intergenic 50.0%
! ATATGGTGGAAATCCACCCC+CGG + chr8_3:58188072-58188091 None:intergenic 50.0%
TCCCTCCCCTTTGTCCCTTT+CGG - chr8_3:58182098-58182117 Msa1297690:three_prime_UTR 55.0%
TCCGAAAGGGACAAAGGGGA+GGG + chr8_3:58182102-58182121 None:intergenic 55.0%
ATCCGAAAGGGACAAAGGGG+AGG + chr8_3:58182103-58182122 None:intergenic 55.0%
CCCCTTTGTCCCTTTCGGAT+TGG - chr8_3:58182103-58182122 Msa1297690:three_prime_UTR 55.0%
CCGCCTAAGTCCAATCCGAA+AGG + chr8_3:58182116-58182135 None:intergenic 55.0%
! TCGGATTGGACTTAGGCGGT+TGG - chr8_3:58182117-58182136 Msa1297690:three_prime_UTR 55.0%
! CGGATTGGACTTAGGCGGTT+GGG - chr8_3:58182118-58182137 Msa1297690:three_prime_UTR 55.0%
GCGGTTGGGTTCATCTGAAC+CGG - chr8_3:58182132-58182151 Msa1297690:three_prime_UTR 55.0%
TGATGGGAGCTGGAGTTTCG+AGG - chr8_3:58182181-58182200 Msa1297690:three_prime_UTR 55.0%
CTCCGATCGCTTTCTCTCAC+CGG - chr8_3:58182356-58182375 Msa1297690:three_prime_UTR 55.0%
CCAGAGTGCGCACTCTCAAT+CGG + chr8_3:58182693-58182712 None:intergenic 55.0%
! CGATTGAGAGTGCGCACTCT+GGG - chr8_3:58182691-58182710 Msa1297690:intron 55.0%
GTTCCATTCTCGGCACCGTT+AGG - chr8_3:58182768-58182787 Msa1297690:intron 55.0%
CATTCTCGGCACCGTTAGGA+GGG - chr8_3:58182772-58182791 Msa1297690:intron 55.0%
GCACCGTTAGGAGGGATGTA+TGG - chr8_3:58182780-58182799 Msa1297690:intron 55.0%
TAGGGAAGGCTGGGGAAGAT+CGG - chr8_3:58182970-58182989 Msa1297690:intron 55.0%
TGGGGAAGATCGGGTTCATG+TGG - chr8_3:58182980-58182999 Msa1297690:intron 55.0%
GGAAGATCGGGTTCATGTGG+TGG - chr8_3:58182983-58183002 Msa1297690:intron 55.0%
GGTTCATGTGGTGGTTTCGG+AGG - chr8_3:58182992-58183011 Msa1297690:intron 55.0%
GAGCAGGGGTGGTTGTTTGT+TGG - chr8_3:58183014-58183033 Msa1297690:intron 55.0%
GGAGAGTCATAACCCCGTTG+AGG - chr8_3:58183148-58183167 Msa1297690:intron 55.0%
GAGTCATAACCCCGTTGAGG+TGG - chr8_3:58183151-58183170 Msa1297690:intron 55.0%
! CCTCCTTTTCCACCTCAACG+GGG + chr8_3:58183163-58183182 None:intergenic 55.0%
! CCCTCCTTTTCCACCTCAAC+GGG + chr8_3:58183164-58183183 None:intergenic 55.0%
CCCGTTGAGGTGGAAAAGGA+GGG - chr8_3:58183161-58183180 Msa1297690:intron 55.0%
GACTGAAATTGGACCGGCTG+TGG - chr8_3:58183223-58183242 Msa1297690:intron 55.0%
AATTGGACCGGCTGTGGGAA+CGG - chr8_3:58183229-58183248 Msa1297690:intron 55.0%
TTACTCTCCGTTCCCACAGC+CGG + chr8_3:58183239-58183258 None:intergenic 55.0%
GAACGGAGAGTAAACGGCGT+AGG - chr8_3:58183246-58183265 Msa1297690:intron 55.0%
AATGCCAATGCAGGTTCGGC+AGG - chr8_3:58183365-58183384 Msa1297690:intron 55.0%
AAACCCTCTGCTTCTGGCAC+TGG - chr8_3:58183548-58183567 Msa1297690:intron 55.0%
CTACCAGTGCCAGAAGCAGA+GGG + chr8_3:58183554-58183573 None:intergenic 55.0%
ACTACCAGTGCCAGAAGCAG+AGG + chr8_3:58183555-58183574 None:intergenic 55.0%
!! TCTGCTTCTGGCACTGGTAG+TGG - chr8_3:58183554-58183573 Msa1297690:intron 55.0%
GGGTCCGGTGGATCATGATT+TGG - chr8_3:58183598-58183617 Msa1297690:intron 55.0%
!! GGAAGTACCCTGATCCTCCT+TGG + chr8_3:58183813-58183832 None:intergenic 55.0%
AGATCCTGCCCCAAATGCTC+TGG + chr8_3:58184624-58184643 None:intergenic 55.0%
TCGCTCTGTCGTGATAGCAG+TGG + chr8_3:58184944-58184963 None:intergenic 55.0%
GCTATCACGACAGAGCGACA+CGG - chr8_3:58184946-58184965 Msa1297690:intron 55.0%
TAGAGAGAGGCAGTGGGTGT+GGG + chr8_3:58185142-58185161 None:intergenic 55.0%
ATAGAGAGAGGCAGTGGGTG+TGG + chr8_3:58185143-58185162 None:intergenic 55.0%
GCTGGAATAGAGAGAGGCAG+TGG + chr8_3:58185149-58185168 None:intergenic 55.0%
!!! ACCTCTGTCGGTTTTGGGGT+TGG - chr8_3:58185695-58185714 Msa1297690:intron 55.0%
ATGCAGCTGTCAATCCCGGA+CGG + chr8_3:58185734-58185753 None:intergenic 55.0%
GTGACGTACTGAAGGGAAGC+AGG + chr8_3:58186279-58186298 None:intergenic 55.0%
GGACCAGAAGCTCAAGGGAA+TGG + chr8_3:58186796-58186815 None:intergenic 55.0%
TTGCCTGAGTTTGGCCGAGA+TGG - chr8_3:58187166-58187185 Msa1297690:CDS 55.0%
ACGGGTGCGGAAATGGTGAA+CGG + chr8_3:58187854-58187873 None:intergenic 55.0%
AAGATGGACGGGTGCGGAAA+TGG + chr8_3:58187861-58187880 None:intergenic 55.0%
GACAAAGGGGAGGGAAGCGA+GGG + chr8_3:58182093-58182112 None:intergenic 60.0%
GAAGAATCTTCCGCCGCCGT+TGG - chr8_3:58182522-58182541 Msa1297690:three_prime_UTR 60.0%
ACCACAACCTCCTCCAACGG+CGG + chr8_3:58182538-58182557 None:intergenic 60.0%
GCCACCACAACCTCCTCCAA+CGG + chr8_3:58182541-58182560 None:intergenic 60.0%
! CCTCTCGGCACAGGTTGAAG+CGG + chr8_3:58182630-58182649 None:intergenic 60.0%
CTTCAACCTGTGCCGAGAGG+TGG - chr8_3:58182630-58182649 Msa1297690:CDS 60.0%
AACTCACCACCTCTCGGCAC+AGG + chr8_3:58182639-58182658 None:intergenic 60.0%
GTGCGCACTCTCAATCGGAC+CGG + chr8_3:58182688-58182707 None:intergenic 60.0%
! CCGATTGAGAGTGCGCACTC+TGG - chr8_3:58182690-58182709 Msa1297690:intron 60.0%
GCGCACTCTGGGCCGATTAA+CGG - chr8_3:58182702-58182721 Msa1297690:intron 60.0%
CACTCTGGGCCGATTAACGG+CGG - chr8_3:58182705-58182724 Msa1297690:intron 60.0%
TACACCACCGGAATCCCCAC+CGG + chr8_3:58182733-58182752 None:intergenic 60.0%
GATTCCGGTGGTGTAGGTGG+CGG - chr8_3:58182738-58182757 Msa1297690:intron 60.0%
TCTTCCGCCACCTACACCAC+CGG + chr8_3:58182745-58182764 None:intergenic 60.0%
! CCTCCTAACGGTGCCGAGAA+TGG + chr8_3:58182774-58182793 None:intergenic 60.0%
CCATTCTCGGCACCGTTAGG+AGG - chr8_3:58182771-58182790 Msa1297690:intron 60.0%
TTCGGAGAAGAAGCGGCCGT+GGG - chr8_3:58182854-58182873 Msa1297690:intron 60.0%
TTCAACACCGGCACCACCCA+CGG + chr8_3:58182873-58182892 None:intergenic 60.0%
GAGGAAAGAGGTTCCGGCCA+AGG - chr8_3:58182902-58182921 Msa1297690:intron 60.0%
AGAGGTTCCGGCCAAGGAGA+AGG - chr8_3:58182908-58182927 Msa1297690:intron 60.0%
TCCACTGCCTTCTCCTTGGC+CGG + chr8_3:58182918-58182937 None:intergenic 60.0%
CACCTCCACTGCCTTCTCCT+TGG + chr8_3:58182922-58182941 None:intergenic 60.0%
TGTGCAGTGGGCGTTAGGGA+AGG - chr8_3:58182956-58182975 Msa1297690:intron 60.0%
AGTGGGCGTTAGGGAAGGCT+GGG - chr8_3:58182961-58182980 Msa1297690:intron 60.0%
AGGGAAGGCTGGGGAAGATC+GGG - chr8_3:58182971-58182990 Msa1297690:intron 60.0%
TGTGGTGGTTTCGGAGGAGC+AGG - chr8_3:58182998-58183017 Msa1297690:intron 60.0%
GTGGTGGTTTCGGAGGAGCA+GGG - chr8_3:58182999-58183018 Msa1297690:intron 60.0%
TGGTGGTTTCGGAGGAGCAG+GGG - chr8_3:58183000-58183019 Msa1297690:intron 60.0%
CCCCGTTGAGGTGGAAAAGG+AGG - chr8_3:58183160-58183179 Msa1297690:intron 60.0%
ACTGCCTGCCGAACCTGCAT+TGG + chr8_3:58183372-58183391 None:intergenic 60.0%
CAGGTTCGGCAGGCAGTAGA+CGG - chr8_3:58183375-58183394 Msa1297690:intron 60.0%
!! GCTTCTGGCACTGGTAGTGG+TGG - chr8_3:58183557-58183576 Msa1297690:intron 60.0%
!! TCTGGCACTGGTAGTGGTGG+TGG - chr8_3:58183560-58183579 Msa1297690:intron 60.0%
!! CTGGCACTGGTAGTGGTGGT+GGG - chr8_3:58183561-58183580 Msa1297690:intron 60.0%
TGGTGGGAGGAGGCGGAAAT+TGG - chr8_3:58183577-58183596 Msa1297690:intron 60.0%
GGTGGGAGGAGGCGGAAATT+GGG - chr8_3:58183578-58183597 Msa1297690:intron 60.0%
GAGGAGGCGGAAATTGGGTC+CGG - chr8_3:58183583-58183602 Msa1297690:intron 60.0%
! GTCACCAGAGCATTTGGGGC+AGG - chr8_3:58184617-58184636 Msa1297690:intron 60.0%
AGTGGCGCCGCTATTAGACC+AGG + chr8_3:58184926-58184945 None:intergenic 60.0%
GCCAACCCCAAAACCGACAG+AGG + chr8_3:58185699-58185718 None:intergenic 60.0%
TGTTGGGCAGGATCTCCGTC+TGG + chr8_3:58186413-58186432 None:intergenic 60.0%
CAGCTTTCTTGGCTGCACGG+AGG + chr8_3:58186454-58186473 None:intergenic 60.0%
CTCCGTGCAGCCAAGAAAGC+TGG - chr8_3:58186452-58186471 Msa1297690:CDS 60.0%
GCGCTGGACCAGAAGCTCAA+GGG + chr8_3:58186801-58186820 None:intergenic 60.0%
! AGCGCTGGACCAGAAGCTCA+AGG + chr8_3:58186802-58186821 None:intergenic 60.0%
GTGCCATCTCGGCCAAACTC+AGG + chr8_3:58187172-58187191 None:intergenic 60.0%
TGACAATCTGTAGCCGGGGG+TGG - chr8_3:58188056-58188075 Msa1297690:five_prime_UTR 60.0%
GGACAAAGGGGAGGGAAGCG+AGG + chr8_3:58182094-58182113 None:intergenic 65.0%
GAATCTTCCGCCGCCGTTGG+AGG - chr8_3:58182525-58182544 Msa1297690:three_prime_UTR 65.0%
ACAACCTCCTCCAACGGCGG+CGG + chr8_3:58182535-58182554 None:intergenic 65.0%
GCCGTTGGAGGAGGTTGTGG+TGG - chr8_3:58182537-58182556 Msa1297690:three_prime_UTR 65.0%
CCGCTTCAACCTGTGCCGAG+AGG - chr8_3:58182627-58182646 Msa1297690:CDS 65.0%
GGTGGGGATTCCGGTGGTGT+AGG - chr8_3:58182732-58182751 Msa1297690:intron 65.0%
GGGGATTCCGGTGGTGTAGG+TGG - chr8_3:58182735-58182754 Msa1297690:intron 65.0%
CTTCGGAGAAGAAGCGGCCG+TGG - chr8_3:58182853-58182872 Msa1297690:intron 65.0%
TCCGGCCAAGGAGAAGGCAG+TGG - chr8_3:58182914-58182933 Msa1297690:intron 65.0%
GGCCAAGGAGAAGGCAGTGG+AGG - chr8_3:58182917-58182936 Msa1297690:intron 65.0%
CAGTGGGCGTTAGGGAAGGC+TGG - chr8_3:58182960-58182979 Msa1297690:intron 65.0%
GTGGGCGTTAGGGAAGGCTG+GGG - chr8_3:58182962-58182981 Msa1297690:intron 65.0%
TGGTTTCGGAGGAGCAGGGG+TGG - chr8_3:58183003-58183022 Msa1297690:intron 65.0%
GTTCGGCAGGCAGTAGACGG+TGG - chr8_3:58183378-58183397 Msa1297690:intron 65.0%
!! GCACTGGTAGTGGTGGTGGG+AGG - chr8_3:58183564-58183583 Msa1297690:intron 65.0%
!! CTGGTAGTGGTGGTGGGAGG+AGG - chr8_3:58183567-58183586 Msa1297690:intron 65.0%
!! GTAGTGGTGGTGGGAGGAGG+CGG - chr8_3:58183570-58183589 Msa1297690:intron 65.0%
GAGGCGGAAATTGGGTCCGG+TGG - chr8_3:58183586-58183605 Msa1297690:intron 65.0%
CACGACAGAGCGACACGGAG+CGG - chr8_3:58184951-58184970 Msa1297690:intron 65.0%
ACGACAGAGCGACACGGAGC+GGG - chr8_3:58184952-58184971 Msa1297690:intron 65.0%
GGCCACTACATGCAGCCGTC+CGG - chr8_3:58185716-58185735 Msa1297690:intron 65.0%
GCCACTACATGCAGCCGTCC+GGG - chr8_3:58185717-58185736 Msa1297690:intron 65.0%
TCCCGGACGGCTGCATGTAG+TGG + chr8_3:58185721-58185740 None:intergenic 65.0%
TCTTCCGCCGCCGTTGGAGG+AGG - chr8_3:58182528-58182547 Msa1297690:three_prime_UTR 70.0%
GCCGCCGTTGGAGGAGGTTG+TGG - chr8_3:58182534-58182553 Msa1297690:three_prime_UTR 70.0%
CCACCGGCGCCGCCGTTAAT+CGG + chr8_3:58182717-58182736 None:intergenic 70.0%
!! CGATTAACGGCGGCGCCGGT+GGG - chr8_3:58182715-58182734 Msa1297690:intron 70.0%
!! GATTAACGGCGGCGCCGGTG+GGG - chr8_3:58182716-58182735 Msa1297690:intron 70.0%
GGAGAAGAAGCGGCCGTGGG+TGG - chr8_3:58182857-58182876 Msa1297690:intron 70.0%
ACAGAGCGACACGGAGCGGG+TGG - chr8_3:58184955-58184974 Msa1297690:intron 70.0%
GGGCCGATTAACGGCGGCGC+CGG - chr8_3:58182711-58182730 Msa1297690:intron 75.0%
! CCGATTAACGGCGGCGCCGG+TGG - chr8_3:58182714-58182733 Msa1297690:intron 75.0%
GAAGCGGCCGTGGGTGGTGC+CGG - chr8_3:58182863-58182882 Msa1297690:intron 75.0%
!!! GGCGGCGCCGGTGGGGATTC+CGG - chr8_3:58182723-58182742 Msa1297690:intron 80.0%
!!! GGCGCCGGTGGGGATTCCGG+TGG - chr8_3:58182726-58182745 Msa1297690:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 58182021 58188132 58182021 ID=Msa1297690;Name=Msa1297690
chr8_3 mRNA 58182021 58188132 58182021 ID=Msa1297690-mRNA-1;Parent=Msa1297690;Name=Msa1297690-mRNA-1;_AED=0.02;_eAED=0.02;_QI=162|1|1|1|1|1|4|554|780
chr8_3 exon 58182021 58182699 58182021 ID=Msa1297690-mRNA-1:exon:16660;Parent=Msa1297690-mRNA-1
chr8_3 exon 58183680 58183944 58183680 ID=Msa1297690-mRNA-1:exon:16659;Parent=Msa1297690-mRNA-1
chr8_3 exon 58185501 58185614 58185501 ID=Msa1297690-mRNA-1:exon:16658;Parent=Msa1297690-mRNA-1
chr8_3 exon 58186132 58188132 58186132 ID=Msa1297690-mRNA-1:exon:16657;Parent=Msa1297690-mRNA-1
chr8_3 five_prime_UTR 58187971 58188132 58187971 ID=Msa1297690-mRNA-1:five_prime_utr;Parent=Msa1297690-mRNA-1
chr8_3 CDS 58186132 58187970 58186132 ID=Msa1297690-mRNA-1:cds;Parent=Msa1297690-mRNA-1
chr8_3 CDS 58185501 58185614 58185501 ID=Msa1297690-mRNA-1:cds;Parent=Msa1297690-mRNA-1
chr8_3 CDS 58183680 58183944 58183680 ID=Msa1297690-mRNA-1:cds;Parent=Msa1297690-mRNA-1
chr8_3 CDS 58182575 58182699 58182575 ID=Msa1297690-mRNA-1:cds;Parent=Msa1297690-mRNA-1
chr8_3 three_prime_UTR 58182021 58182574 58182021 ID=Msa1297690-mRNA-1:three_prime_utr;Parent=Msa1297690-mRNA-1
Gene Sequence

>Msa1297690

ATGGGAGCTGGAGTTTCGAGGTTGTGTTCTTGTTTCGAACCGGTTCAACACCGGAACAACAAAAAAACCGACAACCAAGACGTTACTATTTTCACTGATGAACCGTTAGATGAAACCCTAGGTCATTCTTTCTGTTACGTTAGATCTTCGGCCAGGTTTCTTTCTCCGACTCACTCCGATCGCTTTCTCTCACCGGAATCTACTTCTCTTCGGTTTTCACCTACTCATGAATCGGTTCTTAGAACCCGACCCGATTTTCGTGAAACCGCTTTTAAAGCTATTTCTGGTGCTTCTGTTAGTGCTAATAGTTCTGTTCCGAAAACGGTTATTCAGTTAGAAGAAGAATCTTCCGCCGCCGTTGGAGGAGGTTGTGGTGGCGATTTTGTCACCGGTAAGGGTAATATTGTAAATGGCTTTGAAAGTACGTCGTCGTTTAGTGCTCTACCGCTTCAACCTGTGCCGAGAGGTGGTGAGTTTTTTGAGGGGAGTGGTTATTTTCTCTCCGGTCCGATTGAGAGTGCGCACTCTGGGCCGATTAACGGCGGCGCCGGTGGGGATTCCGGTGGTGTAGGTGGCGGAAGAGATGTTCCATTCTCGGCACCGTTAGGAGGGATGTATGGAAGGAAGAAAGGTGTGTCAGGGTTTAGGAAGGCATTTCAACGGAAGGTGTCTTCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGTTGAATTTTGTTGGGAGGAAAGAGGTTCCGGCCAAGGAGAAGGCAGTGGAGGTGAAAAATGAGAGTAATGTGCAGTGGGCGTTAGGGAAGGCTGGGGAAGATCGGGTTCATGTGGTGGTTTCGGAGGAGCAGGGGTGGTTGTTTGTTGGGATTTACGACGGTTTTAATGGACCGGATGCACCTGAGTTTTTGATGGGGCATATGTACCGCAATGTTCATAATGAGCTTCAGGGTTTGTTTTGGGAACTTGATGAACCAATGGAGAGTCATAACCCCGTTGAGGTGGAAAAGGAGGGAGAAAATTCAGGTTCTGGTTTGGTGAATATGGTACAACAGACTGAAATTGGACCGGCTGTGGGAACGGAGAGTAAACGGCGTAGGTTGTGGGAATTTTTGGCTGAAGATCCTGAAGATGGACTTGATCTTTCTGGGTCGGATAGGTTTGCGTTTTCAGTTGACGATGCACTTAGTGTTAGCAATGCCAATGCAGGTTCGGCAGGCAGTAGACGGTGGCTGTTGCTGTCCAGACTGAAGAACGGTTTGTCAAAGCATAAGGAGGGTGATGGTTTGCCAAAACATAAGGAGGGTAATGGTAGGAAGTTGTTACCGTGGAATTTGGGGAATCAGGAAGAGAAAGAAGAAAAGTCTAAGGTGGAAAACAAACCCTCTGCTTCTGGCACTGGTAGTGGTGGTGGGAGGAGGCGGAAATTGGGTCCGGTGGATCATGATTTGGTTTTGAATGCAATGTCGCGGGCTCTTGAAGTGACAGAACTTGCGTATTTGGATATGACGGAAAAGCTTCTGGATACAAATCCTGAACTTGCTTTGATGGGTTCATGTCTGTTGGTTGTTTTGATGAGGGATGAGGACGTGTATGTTATGAATGTTGGGGATAGTCGTGCAATTGTAGCACATTATGAGCCCAAGGAGGATCAGGGTACTTCCAATGTGGAATCTGCAAGCAAGGGAGATGTTCGTGTTGGTTCCAGCAGTGAGAGCATAGTTGAAGAGTCCTTTGCTTTAGATGGAACTCAAACTGAAACCACAATCAAGGTCGGCAATGAGGGTTCTGCTCAAGAAATGAGGTTGGCGGCATTGCAGCTGTCTACTGACCACAGCACCAGCATTAAAGAAGAAATCATTAGAATTAAAAATGAGCATCCTGATGATCCCCGTTGCATAGTCAATGATAGAGTTAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGGGCAGGATCTTTGAAAAGGCCGAAGTTGAATGATGCCGTACTGGAAATGTTTCGTAATGAATTTATTGGAACTGCCCCATACATATCCTGCTTCCCTTCAGTACGTCACCATAGATTAAGCCCAAGGGATCAGTTCCTGATCCTCTCATCTGATGGTTTGTATCAATATCTAAACAATGAAGAAGTTGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGACGGAGATCCTGCCCAACATTTAATTGAAGAGCTGCTCCTCCGTGCAGCCAAGAAAGCTGGAATGGATTTTCATGAATTGCTGGATATTCCGCAAGGAGATCGGAGGAAGTATCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCAGGGAAATATCTGTGA
Protein sequence

>Msa1297690

MGAGVSRLCSCFEPVQHRNNKKTDNQDVTIFTDEPLDETLGHSFCYVRSSARFLSPTHSDRFLSPESTSLRFSPTHESVLRTRPDFRETAFKAISGASVSANSSVPKTVIQLEEESSAAVGGGCGGDFVTGKGNIVNGFESTSSFSALPLQPVPRGGEFFEGSGYFLSGPIESAHSGPINGGAGGDSGGVGGGRDVPFSAPLGGMYGRKKGVSGFRKAFQRKVSSEKKRPWVVPVLNFVGRKEVPAKEKAVEVKNESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHMYRNVHNELQGLFWELDEPMESHNPVEVEKEGENSGSGLVNMVQQTEIGPAVGTESKRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVSNANAGSAGSRRWLLLSRLKNGLSKHKEGDGLPKHKEGNGRKLLPWNLGNQEEKEEKSKVENKPSASGTGSGGGRRRKLGPVDHDLVLNAMSRALEVTELAYLDMTEKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKEDQGTSNVESASKGDVRVGSSSESIVEESFALDGTQTETTIKVGNEGSAQEMRLAALQLSTDHSTSIKEEIIRIKNEHPDDPRCIVNDRVKGRLKVTRAFGAGSLKRPKLNDAVLEMFRNEFIGTAPYISCFPSVRHHRLSPRDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL*