AlfalfaGEDB | Msa0761310

M. sativa cultivar zhongmu-4 / Msa0761310

KEGG: -
GO: GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008300 GO:0009056 GO:0009685 GO:0009889 GO:0009987 GO:0010371 GO:0010468 GO:0010556 GO:0010565 GO:0010817 GO:0016042 GO:0016054 GO:0016101 GO:0016103 GO:0016115 GO:0019216 GO:0019219 GO:0019222 GO:0019747 GO:0019752 GO:0031323 GO:0031326 GO:0032350 GO:0042445 GO:0042447 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044464 GO:0045487 GO:0046395 GO:0046885 GO:0046890 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0140110 GO:1901575 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0761310	sp\|Q9LSL1\|BH093_ARATH	48.361	366	133	10	1	325	1	351	1.99e-86	266

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0761310	A9YWR2	98.462	325	5	0	1	325	1	325	0.0	655

TFs/TRs:

Gene ID	Type	Classification
Msa0761310	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0033220	Msa0761310	0.819756	9.827458e-53	-8.615850e-47
Msa0077340	Msa0761310	0.812204	4.768067e-51	-8.615850e-47
Msa0693340	Msa0761310	-0.802138	6.466796e-49	-8.615850e-47
Msa0720740	Msa0761310	0.887140	1.852768e-72	-8.615850e-47
Msa0761310	Msa0795750	0.810775	9.746004e-51	-8.615850e-47
Msa0761310	Msa0803780	0.889638	2.024409e-73	-8.615850e-47
Msa0761310	Msa0805390	0.803492	3.397727e-49	-8.615850e-47
Msa0761310	Msa0811690	0.810479	1.129187e-50	-8.615850e-47
Msa0761310	Msa0841860	0.841668	4.131486e-58	-8.615850e-47
Msa0761310	Msa1032470	0.820865	5.472624e-53	-8.615850e-47
Msa0761310	Msa1040150	0.800564	1.358431e-48	-8.615850e-47
Msa0761310	Msa1114690	0.823597	1.271165e-53	-8.615850e-47
Msa0761310	Msa1184230	0.816403	5.630813e-52	-8.615850e-47
Msa0761310	Msa1205490	0.812283	4.583267e-51	-8.615850e-47
Msa0761310	Msa1205990	0.808287	3.335518e-50	-8.615850e-47
Msa0761310	Msa1213040	0.802971	4.355284e-49	-8.615850e-47
Msa0761310	Msa1228040	0.806115	9.619708e-50	-8.615850e-47
Msa0761310	Msa1258030	-0.806947	6.421341e-50	-8.615850e-47
Msa0761310	Msa1260220	0.812076	5.086406e-51	-8.615850e-47
Msa0761310	Msa1297690	0.807362	5.246688e-50	-8.615850e-47
Msa0761310	Msa1349690	0.812780	3.568992e-51	-8.615850e-47
Msa0761310	Msa1358290	0.806227	9.111756e-50	-8.615850e-47
Msa0761310	Msa1392740	0.819877	9.221223e-53	-8.615850e-47
Msa0761310	Msa1405460	0.804549	2.048387e-49	-8.615850e-47
Msa0761310	Msa1407840	0.816492	5.377952e-52	-8.615850e-47
Msa0761310	Msa1437810	0.816842	4.488591e-52	-8.615850e-47
Msa0761310	Msa1454500	0.806407	8.349506e-50	-8.615850e-47
Msa0172760	Msa0761310	0.831593	1.528786e-55	-8.615850e-47
Msa0384590	Msa0761310	0.817089	3.950553e-52	-8.615850e-47
Msa0385930	Msa0761310	-0.807935	3.964285e-50	-8.615850e-47
Msa0426580	Msa0761310	0.817800	2.732493e-52	-8.615850e-47
Msa0434660	Msa0761310	0.819066	1.411794e-52	-8.615850e-47
Msa0472930	Msa0761310	0.818805	1.618499e-52	-8.615850e-47
Msa0478430	Msa0761310	0.817420	3.328009e-52	-8.615850e-47
Msa0269220	Msa0761310	-0.813188	2.905097e-51	-8.615850e-47
Msa0355080	Msa0761310	-0.811216	7.824020e-51	-8.615850e-47
Msa0517590	Msa0761310	0.832686	8.206559e-56	-8.615850e-47
Msa0522540	Msa0761310	0.823641	1.241904e-53	-8.615850e-47
Msa0529030	Msa0761310	0.801360	9.341109e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0761310	MtrunA17_Chr5g0411541	98.462	325	5	0	1	325	1	325	0.0	655
Msa0761310	MtrunA17_Chr3g0141091	51.873	347	135	14	1	325	1	337	3.18e-90	273
Msa0761310	MtrunA17_Chr3g0131691	47.291	203	78	7	142	322	287	482	4.58e-41	149
Msa0761310	MtrunA17_Chr7g0252041	44.211	190	85	3	154	322	284	473	1.81e-40	147
Msa0761310	MtrunA17_Chr1g0211081	28.505	214	105	5	144	315	305	512	1.25e-20	92.4
Msa0761310	MtrunA17_Chr1g0185621	29.851	201	114	4	140	314	454	653	2.29e-15	77.0
Msa0761310	MtrunA17_Chr5g0400671	26.630	184	125	3	142	315	140	323	2.86e-15	75.5
Msa0761310	MtrunA17_Chr4g0049331	23.051	295	186	9	32	314	37	302	1.03e-14	73.6
Msa0761310	MtrunA17_Chr8g0365711	27.513	189	121	3	142	316	230	416	1.54e-14	73.9
Msa0761310	MtrunA17_Chr8g0346161	30.556	180	99	6	154	318	289	457	2.75e-14	73.2
Msa0761310	MtrunA17_Chr2g0298751	33.758	157	82	4	152	286	48	204	3.01e-14	71.2
Msa0761310	MtrunA17_Chr2g0320291	30.682	176	103	5	149	311	126	295	3.77e-14	72.0
Msa0761310	MtrunA17_Chr2g0280161	28.395	162	100	4	146	291	161	322	6.62e-14	71.6
Msa0761310	MtrunA17_Chr5g0411341	30.723	166	89	5	153	295	490	652	7.80e-14	72.4
Msa0761310	MtrunA17_Chr2g0333611	26.984	189	117	5	145	316	32	216	1.36e-13	68.9
Msa0761310	MtrunA17_Chr4g0028071	53.448	58	27	0	155	212	148	205	1.61e-13	70.5
Msa0761310	MtrunA17_Chr5g0400621	30.464	151	96	2	147	288	148	298	7.25e-13	68.6
Msa0761310	MtrunA17_Chr7g0275821	28.261	138	96	2	153	288	249	385	1.27e-12	68.2
Msa0761310	MtrunA17_Chr8g0346151	30.872	149	86	4	154	287	277	423	1.46e-12	68.2
Msa0761310	MtrunA17_Chr7g0260841	35.789	95	59	1	153	245	352	446	3.63e-12	67.0
Msa0761310	MtrunA17_Chr8g0366751	29.375	160	93	4	153	292	459	618	3.86e-12	67.0
Msa0761310	MtrunA17_Chr4g0002781	28.889	180	105	5	109	276	138	306	1.26e-11	64.7
Msa0761310	MtrunA17_Chr6g0468461	31.098	164	94	6	133	288	148	300	3.73e-11	63.5
Msa0761310	MtrunA17_Chr4g0033291	31.410	156	99	3	143	291	142	296	5.91e-11	62.8
Msa0761310	MtrunA17_Chr4g0033281	43.478	69	39	0	143	211	140	208	7.48e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0761310	AT5G65640.1	48.361	366	133	10	1	325	1	351	2.02e-87	266
Msa0761310	AT5G10570.1	47.661	342	122	11	11	325	4	315	4.58e-76	236
Msa0761310	AT1G12860.1	46.739	184	83	3	154	322	265	448	5.56e-41	149
Msa0761310	AT3G26744.1	45.745	188	83	2	154	322	305	492	6.49e-40	146
Msa0761310	AT3G26744.4	45.745	188	83	2	154	322	305	492	6.49e-40	146
Msa0761310	AT3G26744.2	45.745	188	83	2	154	322	305	492	6.49e-40	146
Msa0761310	AT5G65640.2	41.608	286	114	11	1	247	1	272	1.09e-38	139
Msa0761310	AT1G12860.2	48.750	160	67	3	154	298	265	424	8.79e-37	137
Msa0761310	AT3G26744.6	47.561	164	67	2	154	298	305	468	6.29e-36	135
Msa0761310	AT2G16910.1	35.644	202	93	8	155	321	313	512	8.44e-22	96.3
Msa0761310	AT4G09820.1	30.058	173	106	4	145	316	352	510	2.47e-17	83.2
Msa0761310	AT4G29930.6	34.307	137	84	2	155	286	53	188	1.00e-15	75.5
Msa0761310	AT5G46760.1	30.220	182	108	5	153	319	412	589	3.79e-15	76.6
Msa0761310	AT4G29930.2	36.232	138	77	4	155	286	53	185	4.65e-15	73.6
Msa0761310	AT4G29930.5	35.036	137	80	3	155	286	53	185	7.06e-15	73.2
Msa0761310	AT2G46510.1	35.849	106	57	2	153	257	392	487	1.14e-14	75.1
Msa0761310	AT4G29930.4	51.667	60	29	0	155	214	53	112	2.60e-14	70.9
Msa0761310	AT4G17880.1	29.814	161	98	3	153	301	413	570	3.26e-14	73.6
Msa0761310	AT4G29930.1	51.667	60	29	0	155	214	53	112	6.87e-14	70.9
Msa0761310	AT4G29930.3	51.667	60	29	0	155	214	53	112	7.91e-14	70.9
Msa0761310	AT4G29930.7	51.667	60	29	0	155	214	53	112	7.91e-14	70.9
Msa0761310	AT4G37850.2	29.064	203	124	6	102	286	93	293	1.54e-13	70.9
Msa0761310	AT4G37850.1	29.064	203	124	6	102	286	93	293	1.54e-13	70.9
Msa0761310	AT2G28160.2	44.444	72	35	1	141	212	121	187	1.35e-12	67.8
Msa0761310	AT2G28160.1	44.444	72	35	1	141	212	121	187	1.43e-12	67.8
Msa0761310	AT2G22760.2	28.105	153	94	4	157	295	120	270	8.60e-12	65.1
Msa0761310	AT5G57150.1	28.221	163	99	1	155	299	53	215	9.50e-12	64.7
Msa0761310	AT5G57150.2	28.395	162	98	1	155	298	54	215	1.05e-11	64.3
Msa0761310	AT5G57150.5	29.139	151	89	2	155	287	53	203	1.07e-11	63.9
Msa0761310	AT5G57150.3	29.139	151	89	1	155	287	54	204	1.31e-11	63.5
Msa0761310	AT2G22760.1	28.105	153	94	4	157	295	120	270	1.36e-11	64.7
Msa0761310	AT5G57150.4	29.139	151	89	2	155	287	54	204	2.73e-11	63.5
Msa0761310	AT1G10610.2	41.026	78	44	1	151	228	229	304	4.42e-11	63.9
Msa0761310	AT1G63650.3	30.065	153	74	5	157	279	406	555	4.84e-11	63.9
Msa0761310	AT1G63650.1	30.065	153	74	5	157	279	406	555	4.84e-11	63.9
Msa0761310	AT1G63650.2	30.065	153	74	5	157	279	406	555	4.84e-11	63.9
Msa0761310	AT1G32640.1	45.763	59	32	0	153	211	449	507	5.22e-11	63.9
Msa0761310	AT1G10610.3	41.026	78	44	1	151	228	162	237	5.28e-11	63.2
Msa0761310	AT1G10610.1	41.026	78	44	1	151	228	259	334	6.03e-11	63.5

Find 85 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAACCAAAGCTAACTTATT+TGG	0.145838	5_2:+18488540	None:intergenic
TTTAAAGCATATGCATATTC+AGG	0.220131	5_2:+18488353	None:intergenic
TGAATCACCTTGCTGATCTT+AGG	0.222682	5_2:+18489859	None:intergenic
AGGCTGTCCTTCAACCCTTT+TGG	0.223211	5_2:+18489957	None:intergenic
AGTGATTGCTTTATCTCTTC+AGG	0.235636	5_2:+18488713	None:intergenic
TGGAATGAAGTTGAACAAAA+TGG	0.249862	5_2:+18490492	None:intergenic
TTATCATACCCTTATCTTGA+TGG	0.263234	5_2:-18490168	Msa0761310:CDS
ACTCCTTAGAAATTCCTAAA+AGG	0.268635	5_2:+18489465	None:intergenic
CATAGATTTGAATGTCCTTA+TGG	0.286074	5_2:-18490207	Msa0761310:CDS
TTATCAATGTACTACTAAAA+AGG	0.286143	5_2:+18488428	None:intergenic
TTCCCATGTGTTTAGGTAGA+TGG	0.318517	5_2:-18488755	Msa0761310:intron
TTTACCACAACAGGAAAGTA+TGG	0.321693	5_2:-18490109	Msa0761310:CDS
AGATAAAGCAATCACTATTC+AGG	0.330105	5_2:-18488706	Msa0761310:CDS
TTTCTTACCATTACTTCATT+TGG	0.330225	5_2:+18489437	None:intergenic
CAGGAAAGTATGGAAGAGTT+TGG	0.367985	5_2:-18490099	Msa0761310:CDS
CTTTCCTGTTGTGGTAAAAC+TGG	0.371402	5_2:+18490114	None:intergenic
CATTCAAATCTATGGTCTAA+TGG	0.372381	5_2:+18490216	None:intergenic
TAGTAAGTTACAAGAAGAAA+TGG	0.377782	5_2:-18489513	Msa0761310:CDS
AATGGGAGGAGTTTCAAGTT+TGG	0.387752	5_2:+18490510	None:intergenic
AATGAGTTACTACTTCCTAA+TGG	0.393491	5_2:-18490315	Msa0761310:CDS
GAGTCAAAGGTCCAACCATT+AGG	0.395425	5_2:+18490300	None:intergenic
CAGTAACAATCCTGGCTTTG+TGG	0.397442	5_2:+18489262	None:intergenic
GAATCACCTTGCTGATCTTA+GGG	0.398992	5_2:+18489860	None:intergenic
CCCTAGTGTATGTTAAATAC+AGG	0.405026	5_2:+18488494	None:intergenic
CATAAGGACATTCAAATCTA+TGG	0.410090	5_2:+18490208	None:intergenic
ACAGCCTTCAAAGAATCTTA+TGG	0.411193	5_2:-18489941	Msa0761310:CDS
ATCTGCTGTGCCACAAAGCC+AGG	0.421676	5_2:-18489272	Msa0761310:CDS
GCAAATGAAGGGTTTAAAGA+TGG	0.426120	5_2:+18490252	None:intergenic
CTATTCAGGAATGCAGGTTA+TGG	0.429722	5_2:-18488692	Msa0761310:CDS
ATGGACAGGACATCAATTCT+TGG	0.431887	5_2:-18489575	Msa0761310:CDS
GTGATTGCTTTATCTCTTCA+GGG	0.432133	5_2:+18488714	None:intergenic
TCTTCAATATCAATAATTCA+AGG	0.432387	5_2:-18488594	Msa0761310:three_prime_UTR
GAAGAAAGCGTTTGAATGAC+AGG	0.437266	5_2:-18489906	Msa0761310:CDS
GATTCCAAATAAGTTAGCTT+TGG	0.441100	5_2:-18488544	Msa0761310:three_prime_UTR
GGAATGAAGTTGAACAAAAT+GGG	0.446885	5_2:+18490493	None:intergenic
TCAGCCATAAGATTCTTTGA+AGG	0.448137	5_2:+18489937	None:intergenic
AAAATGGAACTTTCTCAACT+TGG	0.469304	5_2:-18490399	Msa0761310:CDS
TATTCATAGTTCACAAAAGT+GGG	0.479190	5_2:-18490434	Msa0761310:five_prime_UTR
ATGACAGGCTTTCCATGCTT+AGG	0.479470	5_2:-18489891	Msa0761310:CDS
GCCAAATCCAAAAGGGTTGA+AGG	0.482278	5_2:-18489964	Msa0761310:CDS
CCCTGTATTTAACATACACT+AGG	0.484133	5_2:-18488495	Msa0761310:three_prime_UTR
ACTGAGAATCCATCAAGATA+AGG	0.498561	5_2:+18490159	None:intergenic
CTGAGAATCCATCAAGATAA+GGG	0.499837	5_2:+18490160	None:intergenic
AGTTACTACTTCCTAATGGT+TGG	0.504248	5_2:-18490311	Msa0761310:CDS
TAAGTTACAAGAAGAAATGG+AGG	0.505778	5_2:-18489510	Msa0761310:CDS
ACATGAAAGAGCTTCTAGAA+AGG	0.506584	5_2:-18489538	Msa0761310:CDS
TTGAATTATTGATATTGAAG+AGG	0.507132	5_2:+18488596	None:intergenic
TCTTCCATACTTTCCTGTTG+TGG	0.509860	5_2:+18490105	None:intergenic
AGATACTGATTCTTGTGTCC+TGG	0.512516	5_2:+18489291	None:intergenic
ACATGGAATACTTTATCCAC+TGG	0.522465	5_2:-18490342	Msa0761310:CDS
CAATCACTATTCAGGAATGC+AGG	0.523750	5_2:-18488698	Msa0761310:CDS
TGATGTTGAGAGGAGAGACC+AGG	0.532244	5_2:-18489309	Msa0761310:CDS
TTCAGGAATGCAGGTTATGG+TGG	0.533157	5_2:-18488689	Msa0761310:CDS
GATGATGCATCAGTTCCATA+AGG	0.540398	5_2:+18490192	None:intergenic
GTTAAAGCCAAATGAAGTAA+TGG	0.545862	5_2:-18489444	Msa0761310:CDS
AGAATCTTATGGCTGAAAGA+AGG	0.549094	5_2:-18489930	Msa0761310:CDS
TTATGGTGGGAGGTGTCTCT+AGG	0.550677	5_2:-18488675	Msa0761310:exon
TTGTTGGAAGTGAGAACAAG+AGG	0.557413	5_2:-18490074	Msa0761310:CDS
TTATTCATAGTTCACAAAAG+TGG	0.563281	5_2:-18490435	Msa0761310:five_prime_UTR
AGGTGTCTCTAGGAAAATGA+TGG	0.564458	5_2:-18488665	Msa0761310:exon
CAAGAAGAAATGGAGGAAGA+AGG	0.564987	5_2:-18489503	Msa0761310:CDS
GTGAACACATTAGAAGCATT+AGG	0.568569	5_2:-18489233	Msa0761310:CDS
ACTGTTGACAGTAACAATCC+TGG	0.569200	5_2:+18489254	None:intergenic
GTTGAGAATGAAGCAAATGA+AGG	0.578645	5_2:+18490240	None:intergenic
TAAAATCAGCTGCAAAGTTG+AGG	0.582223	5_2:-18490040	Msa0761310:CDS
AAAATCACTTTGAATTCACA+TGG	0.583837	5_2:+18488384	None:intergenic
CCTGTATTTAACATACACTA+GGG	0.586177	5_2:-18488494	Msa0761310:three_prime_UTR
TCCTTTGTATCAAGTTGCAG+TGG	0.602054	5_2:-18488294	Msa0761310:three_prime_UTR
GCCACTGCAACTTGATACAA+AGG	0.603330	5_2:+18488293	None:intergenic
TAACACACTGGTGAATCTCA+AGG	0.606173	5_2:+18489210	None:intergenic
TCAGGAATGCAGGTTATGGT+GGG	0.610095	5_2:-18488688	Msa0761310:CDS
CCTAGTGTATGTTAAATACA+GGG	0.610870	5_2:+18488495	None:intergenic
TTGAGAATGAAGCAAATGAA+GGG	0.614806	5_2:+18490241	None:intergenic
AATGGTAAGAAATTCCCCTA+AGG	0.619045	5_2:-18489426	Msa0761310:intron
TAGTAACTCATTCAAACCAG+TGG	0.620677	5_2:+18490326	None:intergenic
TGAAACTGCTTATAACACAC+TGG	0.622427	5_2:+18489198	None:intergenic
GGTGCTGAATCATCAAACTC+AGG	0.624297	5_2:+18490135	None:intergenic
AGGGACAATTGACCTAAGCA+TGG	0.627542	5_2:+18489879	None:intergenic
GGAATGCAGGTTATGGTGGG+AGG	0.648346	5_2:-18488685	Msa0761310:CDS
TAGCTCCAAGAAAAGACACA+TGG	0.656108	5_2:-18490359	Msa0761310:CDS
ATTGCAAGCATCTTGCTCAG+AGG	0.660283	5_2:-18489165	Msa0761310:intron
AAACAGAAAAGTCTTCACAA+TGG	0.670690	5_2:+18490472	None:intergenic
GGAACTAAACCATACCTTAG+GGG	0.677566	5_2:+18489412	None:intergenic
ATGAAGTTGAACAAAATGGG+AGG	0.684237	5_2:+18490496	None:intergenic
AATTGTCCCTAAGATCAGCA+AGG	0.709185	5_2:-18489866	Msa0761310:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTATTTGTGTGTTTTAATTT+TGG	-	chr5_2:18489098-18489117	Msa0761310:intron	15.0%
!!!	AAAATGTAAATTTTGTAAGA+TGG	-	chr5_2:18489221-18489240	Msa0761310:CDS	15.0%
!!	ATTACATTTATTCATAAACT+TGG	+	chr5_2:18489455-18489474	None:intergenic	15.0%
!!	TTATGAATAAATGTAATGAA+TGG	-	chr5_2:18489458-18489477	Msa0761310:CDS	15.0%
!!!	ATGCTTTAAAATTTCTTTTT+TGG	-	chr5_2:18490475-18490494	Msa0761310:five_prime_UTR	15.0%
!!!	TGCTTTAAAATTTCTTTTTT+GGG	-	chr5_2:18490476-18490495	Msa0761310:five_prime_UTR	15.0%
!!!	TTATTTGTGTGTTTTAATTT+TGG	-	chr5_2:18489098-18489117	Msa0761310:intron	15.0%
!!!	AAAATGTAAATTTTGTAAGA+TGG	-	chr5_2:18489221-18489240	Msa0761310:CDS	15.0%
!!	ATTACATTTATTCATAAACT+TGG	+	chr5_2:18489455-18489474	None:intergenic	15.0%
!!	TTATGAATAAATGTAATGAA+TGG	-	chr5_2:18489458-18489477	Msa0761310:CDS	15.0%
!!!	ATGCTTTAAAATTTCTTTTT+TGG	-	chr5_2:18490475-18490494	Msa0761310:five_prime_UTR	15.0%
!!!	TGCTTTAAAATTTCTTTTTT+GGG	-	chr5_2:18490476-18490495	Msa0761310:five_prime_UTR	15.0%
!!	CTGAACATAAATACATATAT+TGG	+	chr5_2:18489075-18489094	None:intergenic	20.0%
!!	ATAATTGATCATGAAAAGTT+TGG	-	chr5_2:18489778-18489797	Msa0761310:intron	20.0%
!!	TTGAATTATTGATATTGAAG+AGG	+	chr5_2:18490222-18490241	None:intergenic	20.0%
!!	TCTTCAATATCAATAATTCA+AGG	-	chr5_2:18490221-18490240	Msa0761310:CDS	20.0%
!!	TTATCAATGTACTACTAAAA+AGG	+	chr5_2:18490390-18490409	None:intergenic	20.0%
!!!	TTTTAGTAGTACATTGATAA+TGG	-	chr5_2:18490390-18490409	Msa0761310:CDS	20.0%
!!	CTGAACATAAATACATATAT+TGG	+	chr5_2:18489075-18489094	None:intergenic	20.0%
!!	ATAATTGATCATGAAAAGTT+TGG	-	chr5_2:18489778-18489797	Msa0761310:intron	20.0%
!!	TTGAATTATTGATATTGAAG+AGG	+	chr5_2:18490222-18490241	None:intergenic	20.0%
!!	TCTTCAATATCAATAATTCA+AGG	-	chr5_2:18490221-18490240	Msa0761310:CDS	20.0%
!!	TTATCAATGTACTACTAAAA+AGG	+	chr5_2:18490390-18490409	None:intergenic	20.0%
!!!	TTTTAGTAGTACATTGATAA+TGG	-	chr5_2:18490390-18490409	Msa0761310:CDS	20.0%
!	TTATTCATAGTTCACAAAAG+TGG	-	chr5_2:18488380-18488399	Msa0761310:three_prime_UTR	25.0%
!	TATTCATAGTTCACAAAAGT+GGG	-	chr5_2:18488381-18488400	Msa0761310:three_prime_UTR	25.0%
!!	ATTTTCATCAAATGAGTCAA+AGG	+	chr5_2:18488531-18488550	None:intergenic	25.0%
!	TAGTAAGTTACAAGAAGAAA+TGG	-	chr5_2:18489302-18489321	Msa0761310:CDS	25.0%
!!	ACAAATCAGATAAACCTTTT+AGG	-	chr5_2:18489336-18489355	Msa0761310:intron	25.0%
!!!	AAACCTTTTAGGAATTTCTA+AGG	-	chr5_2:18489347-18489366	Msa0761310:intron	25.0%
!	TTTCTTACCATTACTTCATT+TGG	+	chr5_2:18489381-18489400	None:intergenic	25.0%
!	AAATTGTATTACTGCATGTT+CGG	-	chr5_2:18489678-18489697	Msa0761310:intron	25.0%
!!!	CGTAGTTTTTAGTAAAATGA+CGG	+	chr5_2:18489739-18489758	None:intergenic	25.0%
!	TGGCGAAAAATTAATTATAG+AGG	+	chr5_2:18489877-18489896	None:intergenic	25.0%
!!	TCTATAATTAATTTTTCGCC+AGG	-	chr5_2:18489876-18489895	Msa0761310:CDS	25.0%
!	AATCGAATGTAATAAATTCC+TGG	+	chr5_2:18489897-18489916	None:intergenic	25.0%
!!!	ACATTCGATTCAATTTTAGT+CGG	-	chr5_2:18489907-18489926	Msa0761310:CDS	25.0%
!	TTTGCAGATGATGAAAAAAA+AGG	-	chr5_2:18490187-18490206	Msa0761310:CDS	25.0%
!	TAAACCAAAGCTAACTTATT+TGG	+	chr5_2:18490278-18490297	None:intergenic	25.0%
!!	TTTGAATTCACATGGATTTT+TGG	+	chr5_2:18490426-18490445	None:intergenic	25.0%
!	AAAATCACTTTGAATTCACA+TGG	+	chr5_2:18490434-18490453	None:intergenic	25.0%
!!	TTTAAAGCATATGCATATTC+AGG	+	chr5_2:18490465-18490484	None:intergenic	25.0%
!!	GTGAATGACACAATTTTAAA+AGG	-	chr5_2:18490553-18490572	Msa0761310:five_prime_UTR	25.0%
!!!	ATGACACAATTTTAAAAGGT+TGG	-	chr5_2:18490557-18490576	Msa0761310:five_prime_UTR	25.0%
!	TTATTCATAGTTCACAAAAG+TGG	-	chr5_2:18488380-18488399	Msa0761310:three_prime_UTR	25.0%
!	TATTCATAGTTCACAAAAGT+GGG	-	chr5_2:18488381-18488400	Msa0761310:three_prime_UTR	25.0%
!!	ATTTTCATCAAATGAGTCAA+AGG	+	chr5_2:18488531-18488550	None:intergenic	25.0%
!	TAGTAAGTTACAAGAAGAAA+TGG	-	chr5_2:18489302-18489321	Msa0761310:CDS	25.0%
!!	ACAAATCAGATAAACCTTTT+AGG	-	chr5_2:18489336-18489355	Msa0761310:intron	25.0%
!!!	AAACCTTTTAGGAATTTCTA+AGG	-	chr5_2:18489347-18489366	Msa0761310:intron	25.0%
!	TTTCTTACCATTACTTCATT+TGG	+	chr5_2:18489381-18489400	None:intergenic	25.0%
!	AAATTGTATTACTGCATGTT+CGG	-	chr5_2:18489678-18489697	Msa0761310:intron	25.0%
!!!	CGTAGTTTTTAGTAAAATGA+CGG	+	chr5_2:18489739-18489758	None:intergenic	25.0%
!	TGGCGAAAAATTAATTATAG+AGG	+	chr5_2:18489877-18489896	None:intergenic	25.0%
!!	TCTATAATTAATTTTTCGCC+AGG	-	chr5_2:18489876-18489895	Msa0761310:CDS	25.0%
!	AATCGAATGTAATAAATTCC+TGG	+	chr5_2:18489897-18489916	None:intergenic	25.0%
!!!	ACATTCGATTCAATTTTAGT+CGG	-	chr5_2:18489907-18489926	Msa0761310:CDS	25.0%
!	TTTGCAGATGATGAAAAAAA+AGG	-	chr5_2:18490187-18490206	Msa0761310:CDS	25.0%
!	TAAACCAAAGCTAACTTATT+TGG	+	chr5_2:18490278-18490297	None:intergenic	25.0%
!!	TTTGAATTCACATGGATTTT+TGG	+	chr5_2:18490426-18490445	None:intergenic	25.0%
!	AAAATCACTTTGAATTCACA+TGG	+	chr5_2:18490434-18490453	None:intergenic	25.0%
!!	TTTAAAGCATATGCATATTC+AGG	+	chr5_2:18490465-18490484	None:intergenic	25.0%
!!	GTGAATGACACAATTTTAAA+AGG	-	chr5_2:18490553-18490572	Msa0761310:five_prime_UTR	25.0%
	GGAATGAAGTTGAACAAAAT+GGG	+	chr5_2:18488325-18488344	None:intergenic	30.0%
	TGGAATGAAGTTGAACAAAA+TGG	+	chr5_2:18488326-18488345	None:intergenic	30.0%
	AAACAGAAAAGTCTTCACAA+TGG	+	chr5_2:18488346-18488365	None:intergenic	30.0%
!	ATTGTGAAGACTTTTCTGTT+TGG	-	chr5_2:18488345-18488364	Msa0761310:three_prime_UTR	30.0%
	TGGGAAAAGAGAAAGAAAAA+TGG	-	chr5_2:18488400-18488419	Msa0761310:three_prime_UTR	30.0%
	AAAATGGAACTTTCTCAACT+TGG	-	chr5_2:18488416-18488435	Msa0761310:three_prime_UTR	30.0%
	AATGAGTTACTACTTCCTAA+TGG	-	chr5_2:18488500-18488519	Msa0761310:three_prime_UTR	30.0%
	TTGAGAATGAAGCAAATGAA+GGG	+	chr5_2:18488577-18488596	None:intergenic	30.0%
	CATTCAAATCTATGGTCTAA+TGG	+	chr5_2:18488602-18488621	None:intergenic	30.0%
	CATAAGGACATTCAAATCTA+TGG	+	chr5_2:18488610-18488629	None:intergenic	30.0%
	CATAGATTTGAATGTCCTTA+TGG	-	chr5_2:18488608-18488627	Msa0761310:three_prime_UTR	30.0%
	TTATCATACCCTTATCTTGA+TGG	-	chr5_2:18488647-18488666	Msa0761310:three_prime_UTR	30.0%
!	TGAAACTCCAGTTTTTAACA+TGG	-	chr5_2:18488808-18488827	Msa0761310:intron	30.0%
!	GAAACTCCAGTTTTTAACAT+GGG	-	chr5_2:18488809-18488828	Msa0761310:intron	30.0%
	AGAAAAAAGCCAAATCCAAA+AGG	-	chr5_2:18488843-18488862	Msa0761310:intron	30.0%
	GAAAAAAGCCAAATCCAAAA+GGG	-	chr5_2:18488844-18488863	Msa0761310:intron	30.0%
!	GTAAATTTTGTAAGATGGAC+AGG	-	chr5_2:18489226-18489245	Msa0761310:CDS	30.0%
	TAAGTTACAAGAAGAAATGG+AGG	-	chr5_2:18489305-18489324	Msa0761310:CDS	30.0%
	ACTCCTTAGAAATTCCTAAA+AGG	+	chr5_2:18489353-18489372	None:intergenic	30.0%
	GTTAAAGCCAAATGAAGTAA+TGG	-	chr5_2:18489371-18489390	Msa0761310:intron	30.0%
	GATTATGCATTAAGTGTTCA+AGG	+	chr5_2:18489427-18489446	None:intergenic	30.0%
!!	TTTTTCAGTTTGATGTTGAG+AGG	-	chr5_2:18489496-18489515	Msa0761310:CDS	30.0%
	TTATAACCCTTAAAGCTCAA+AGG	+	chr5_2:18489762-18489781	None:intergenic	30.0%
!!!	TAGTCTTTTTTTTGGTTCTG+CGG	+	chr5_2:18489977-18489996	None:intergenic	30.0%
	AACCATGCAAACAATTATTG+AGG	+	chr5_2:18490004-18490023	None:intergenic	30.0%
	CATATTATTCCCATGTGTTT+AGG	-	chr5_2:18490053-18490072	Msa0761310:CDS	30.0%
	AGATAAAGCAATCACTATTC+AGG	-	chr5_2:18490109-18490128	Msa0761310:CDS	30.0%
!	GATTCCAAATAAGTTAGCTT+TGG	-	chr5_2:18490271-18490290	Msa0761310:CDS	30.0%
	CCTAGTGTATGTTAAATACA+GGG	+	chr5_2:18490323-18490342	None:intergenic	30.0%
	CCTGTATTTAACATACACTA+GGG	-	chr5_2:18490321-18490340	Msa0761310:CDS	30.0%
!	AGGTGGAATTTTATCACAAT+GGG	+	chr5_2:18490370-18490389	None:intergenic	30.0%
!	AAGGTGGAATTTTATCACAA+TGG	+	chr5_2:18490371-18490390	None:intergenic	30.0%
	TCAATGTACTACTAAAAAGG+TGG	+	chr5_2:18490387-18490406	None:intergenic	30.0%
	GGAATGAAGTTGAACAAAAT+GGG	+	chr5_2:18488325-18488344	None:intergenic	30.0%
	TGGAATGAAGTTGAACAAAA+TGG	+	chr5_2:18488326-18488345	None:intergenic	30.0%
	AAACAGAAAAGTCTTCACAA+TGG	+	chr5_2:18488346-18488365	None:intergenic	30.0%
!	ATTGTGAAGACTTTTCTGTT+TGG	-	chr5_2:18488345-18488364	Msa0761310:three_prime_UTR	30.0%
	TGGGAAAAGAGAAAGAAAAA+TGG	-	chr5_2:18488400-18488419	Msa0761310:three_prime_UTR	30.0%
	AAAATGGAACTTTCTCAACT+TGG	-	chr5_2:18488416-18488435	Msa0761310:three_prime_UTR	30.0%
	AATGAGTTACTACTTCCTAA+TGG	-	chr5_2:18488500-18488519	Msa0761310:three_prime_UTR	30.0%
	TTGAGAATGAAGCAAATGAA+GGG	+	chr5_2:18488577-18488596	None:intergenic	30.0%
	CATTCAAATCTATGGTCTAA+TGG	+	chr5_2:18488602-18488621	None:intergenic	30.0%
	CATAAGGACATTCAAATCTA+TGG	+	chr5_2:18488610-18488629	None:intergenic	30.0%
	CATAGATTTGAATGTCCTTA+TGG	-	chr5_2:18488608-18488627	Msa0761310:three_prime_UTR	30.0%
	TTATCATACCCTTATCTTGA+TGG	-	chr5_2:18488647-18488666	Msa0761310:three_prime_UTR	30.0%
!	TGAAACTCCAGTTTTTAACA+TGG	-	chr5_2:18488808-18488827	Msa0761310:intron	30.0%
!	GAAACTCCAGTTTTTAACAT+GGG	-	chr5_2:18488809-18488828	Msa0761310:intron	30.0%
	AGAAAAAAGCCAAATCCAAA+AGG	-	chr5_2:18488843-18488862	Msa0761310:intron	30.0%
	GAAAAAAGCCAAATCCAAAA+GGG	-	chr5_2:18488844-18488863	Msa0761310:intron	30.0%
!	GTAAATTTTGTAAGATGGAC+AGG	-	chr5_2:18489226-18489245	Msa0761310:CDS	30.0%
	TAAGTTACAAGAAGAAATGG+AGG	-	chr5_2:18489305-18489324	Msa0761310:CDS	30.0%
	ACTCCTTAGAAATTCCTAAA+AGG	+	chr5_2:18489353-18489372	None:intergenic	30.0%
	GTTAAAGCCAAATGAAGTAA+TGG	-	chr5_2:18489371-18489390	Msa0761310:intron	30.0%
	GATTATGCATTAAGTGTTCA+AGG	+	chr5_2:18489427-18489446	None:intergenic	30.0%
!!	TTTTTCAGTTTGATGTTGAG+AGG	-	chr5_2:18489496-18489515	Msa0761310:CDS	30.0%
	TTATAACCCTTAAAGCTCAA+AGG	+	chr5_2:18489762-18489781	None:intergenic	30.0%
!!!	TAGTCTTTTTTTTGGTTCTG+CGG	+	chr5_2:18489977-18489996	None:intergenic	30.0%
	AACCATGCAAACAATTATTG+AGG	+	chr5_2:18490004-18490023	None:intergenic	30.0%
	CATATTATTCCCATGTGTTT+AGG	-	chr5_2:18490053-18490072	Msa0761310:CDS	30.0%
	AGATAAAGCAATCACTATTC+AGG	-	chr5_2:18490109-18490128	Msa0761310:CDS	30.0%
!	GATTCCAAATAAGTTAGCTT+TGG	-	chr5_2:18490271-18490290	Msa0761310:CDS	30.0%
	CCTAGTGTATGTTAAATACA+GGG	+	chr5_2:18490323-18490342	None:intergenic	30.0%
	CCTGTATTTAACATACACTA+GGG	-	chr5_2:18490321-18490340	Msa0761310:CDS	30.0%
!	AGGTGGAATTTTATCACAAT+GGG	+	chr5_2:18490370-18490389	None:intergenic	30.0%
!	AAGGTGGAATTTTATCACAA+TGG	+	chr5_2:18490371-18490390	None:intergenic	30.0%
	TCAATGTACTACTAAAAAGG+TGG	+	chr5_2:18490387-18490406	None:intergenic	30.0%
	ATGAAGTTGAACAAAATGGG+AGG	+	chr5_2:18488322-18488341	None:intergenic	35.0%
!!	TTCTCAACTTGGTTTTCTTG+AGG	-	chr5_2:18488427-18488446	Msa0761310:three_prime_UTR	35.0%
!	GTATTCCATGTGTCTTTTCT+TGG	+	chr5_2:18488464-18488483	None:intergenic	35.0%
	ACATGGAATACTTTATCCAC+TGG	-	chr5_2:18488473-18488492	Msa0761310:three_prime_UTR	35.0%
	TAGTAACTCATTCAAACCAG+TGG	+	chr5_2:18488492-18488511	None:intergenic	35.0%
	AGTTACTACTTCCTAATGGT+TGG	-	chr5_2:18488504-18488523	Msa0761310:three_prime_UTR	35.0%
	GCAAATGAAGGGTTTAAAGA+TGG	+	chr5_2:18488566-18488585	None:intergenic	35.0%
	GTTGAGAATGAAGCAAATGA+AGG	+	chr5_2:18488578-18488597	None:intergenic	35.0%
	CTGAGAATCCATCAAGATAA+GGG	+	chr5_2:18488658-18488677	None:intergenic	35.0%
	ACTGAGAATCCATCAAGATA+AGG	+	chr5_2:18488659-18488678	None:intergenic	35.0%
	TTTACCACAACAGGAAAGTA+TGG	-	chr5_2:18488706-18488725	Msa0761310:CDS	35.0%
!!!	ATGGAAGAGTTTGGTTTTGT+TGG	-	chr5_2:18488725-18488744	Msa0761310:CDS	35.0%
	TAAAATCAGCTGCAAAGTTG+AGG	-	chr5_2:18488775-18488794	Msa0761310:intron	35.0%
	CACAAACCCATGTTAAAAAC+TGG	+	chr5_2:18488818-18488837	None:intergenic	35.0%
!	GTTTTTAACATGGGTTTGTG+TGG	-	chr5_2:18488818-18488837	Msa0761310:intron	35.0%
	ACAGCCTTCAAAGAATCTTA+TGG	-	chr5_2:18488874-18488893	Msa0761310:intron	35.0%
	TCAGCCATAAGATTCTTTGA+AGG	+	chr5_2:18488881-18488900	None:intergenic	35.0%
	AGAATCTTATGGCTGAAAGA+AGG	-	chr5_2:18488885-18488904	Msa0761310:intron	35.0%
!	CATTGACTAGCACTTGTATT+TGG	-	chr5_2:18489161-18489180	Msa0761310:intron	35.0%
!	ACATGAAAGAGCTTCTAGAA+AGG	-	chr5_2:18489277-18489296	Msa0761310:CDS	35.0%
	AATGGTAAGAAATTCCCCTA+AGG	-	chr5_2:18489389-18489408	Msa0761310:intron	35.0%
	TAAGAAATTCCCCTAAGGTA+TGG	-	chr5_2:18489394-18489413	Msa0761310:intron	35.0%
	AGGAACTAAACCATACCTTA+GGG	+	chr5_2:18489407-18489426	None:intergenic	35.0%
	AAGGAACTAAACCATACCTT+AGG	+	chr5_2:18489408-18489427	None:intergenic	35.0%
!!	GTGAACACATTAGAAGCATT+AGG	-	chr5_2:18489582-18489601	Msa0761310:intron	35.0%
	TGAAACTGCTTATAACACAC+TGG	+	chr5_2:18489620-18489639	None:intergenic	35.0%
!!!	GAGGCGAATAGTCTTTTTTT+TGG	+	chr5_2:18489985-18490004	None:intergenic	35.0%
	GTGATTGCTTTATCTCTTCA+GGG	+	chr5_2:18490104-18490123	None:intergenic	35.0%
	AGTGATTGCTTTATCTCTTC+AGG	+	chr5_2:18490105-18490124	None:intergenic	35.0%
	CCCTGTATTTAACATACACT+AGG	-	chr5_2:18490320-18490339	Msa0761310:CDS	35.0%
	CCCTAGTGTATGTTAAATAC+AGG	+	chr5_2:18490324-18490343	None:intergenic	35.0%
	ATGAAGTTGAACAAAATGGG+AGG	+	chr5_2:18488322-18488341	None:intergenic	35.0%
!!	TTCTCAACTTGGTTTTCTTG+AGG	-	chr5_2:18488427-18488446	Msa0761310:three_prime_UTR	35.0%
!	GTATTCCATGTGTCTTTTCT+TGG	+	chr5_2:18488464-18488483	None:intergenic	35.0%
	ACATGGAATACTTTATCCAC+TGG	-	chr5_2:18488473-18488492	Msa0761310:three_prime_UTR	35.0%
	TAGTAACTCATTCAAACCAG+TGG	+	chr5_2:18488492-18488511	None:intergenic	35.0%
	AGTTACTACTTCCTAATGGT+TGG	-	chr5_2:18488504-18488523	Msa0761310:three_prime_UTR	35.0%
	GCAAATGAAGGGTTTAAAGA+TGG	+	chr5_2:18488566-18488585	None:intergenic	35.0%
	GTTGAGAATGAAGCAAATGA+AGG	+	chr5_2:18488578-18488597	None:intergenic	35.0%
	CTGAGAATCCATCAAGATAA+GGG	+	chr5_2:18488658-18488677	None:intergenic	35.0%
	ACTGAGAATCCATCAAGATA+AGG	+	chr5_2:18488659-18488678	None:intergenic	35.0%
	TTTACCACAACAGGAAAGTA+TGG	-	chr5_2:18488706-18488725	Msa0761310:CDS	35.0%
!!!	ATGGAAGAGTTTGGTTTTGT+TGG	-	chr5_2:18488725-18488744	Msa0761310:CDS	35.0%
	TAAAATCAGCTGCAAAGTTG+AGG	-	chr5_2:18488775-18488794	Msa0761310:intron	35.0%
	CACAAACCCATGTTAAAAAC+TGG	+	chr5_2:18488818-18488837	None:intergenic	35.0%
!	GTTTTTAACATGGGTTTGTG+TGG	-	chr5_2:18488818-18488837	Msa0761310:intron	35.0%
	ACAGCCTTCAAAGAATCTTA+TGG	-	chr5_2:18488874-18488893	Msa0761310:intron	35.0%
	TCAGCCATAAGATTCTTTGA+AGG	+	chr5_2:18488881-18488900	None:intergenic	35.0%
	AGAATCTTATGGCTGAAAGA+AGG	-	chr5_2:18488885-18488904	Msa0761310:intron	35.0%
!	CATTGACTAGCACTTGTATT+TGG	-	chr5_2:18489161-18489180	Msa0761310:intron	35.0%
!	ACATGAAAGAGCTTCTAGAA+AGG	-	chr5_2:18489277-18489296	Msa0761310:CDS	35.0%
	AATGGTAAGAAATTCCCCTA+AGG	-	chr5_2:18489389-18489408	Msa0761310:intron	35.0%
	TAAGAAATTCCCCTAAGGTA+TGG	-	chr5_2:18489394-18489413	Msa0761310:intron	35.0%
	AGGAACTAAACCATACCTTA+GGG	+	chr5_2:18489407-18489426	None:intergenic	35.0%
	AAGGAACTAAACCATACCTT+AGG	+	chr5_2:18489408-18489427	None:intergenic	35.0%
!!	GTGAACACATTAGAAGCATT+AGG	-	chr5_2:18489582-18489601	Msa0761310:intron	35.0%
	TGAAACTGCTTATAACACAC+TGG	+	chr5_2:18489620-18489639	None:intergenic	35.0%
!!!	GAGGCGAATAGTCTTTTTTT+TGG	+	chr5_2:18489985-18490004	None:intergenic	35.0%
	GTGATTGCTTTATCTCTTCA+GGG	+	chr5_2:18490104-18490123	None:intergenic	35.0%
	AGTGATTGCTTTATCTCTTC+AGG	+	chr5_2:18490105-18490124	None:intergenic	35.0%
	CCCTGTATTTAACATACACT+AGG	-	chr5_2:18490320-18490339	Msa0761310:CDS	35.0%
	CCCTAGTGTATGTTAAATAC+AGG	+	chr5_2:18490324-18490343	None:intergenic	35.0%
!!	AATGGGAGGAGTTTCAAGTT+TGG	+	chr5_2:18488308-18488327	None:intergenic	40.0%
	TAGCTCCAAGAAAAGACACA+TGG	-	chr5_2:18488456-18488475	Msa0761310:three_prime_UTR	40.0%
	GATGATGCATCAGTTCCATA+AGG	+	chr5_2:18488626-18488645	None:intergenic	40.0%
	CTTTCCTGTTGTGGTAAAAC+TGG	+	chr5_2:18488704-18488723	None:intergenic	40.0%
	TCTTCCATACTTTCCTGTTG+TGG	+	chr5_2:18488713-18488732	None:intergenic	40.0%
!	CAGGAAAGTATGGAAGAGTT+TGG	-	chr5_2:18488716-18488735	Msa0761310:CDS	40.0%
	TTGTTGGAAGTGAGAACAAG+AGG	-	chr5_2:18488741-18488760	Msa0761310:CDS	40.0%
!	TCCTTCAACCCTTTTGGATT+TGG	+	chr5_2:18488855-18488874	None:intergenic	40.0%
!!	GAAGAAAGCGTTTGAATGAC+AGG	-	chr5_2:18488909-18488928	Msa0761310:intron	40.0%
	AATTGTCCCTAAGATCAGCA+AGG	-	chr5_2:18488949-18488968	Msa0761310:intron	40.0%
	GAATCACCTTGCTGATCTTA+GGG	+	chr5_2:18488958-18488977	None:intergenic	40.0%
	TGAATCACCTTGCTGATCTT+AGG	+	chr5_2:18488959-18488978	None:intergenic	40.0%
	ATGGACAGGACATCAATTCT+TGG	-	chr5_2:18489240-18489259	Msa0761310:CDS	40.0%
	CAAGAAGAAATGGAGGAAGA+AGG	-	chr5_2:18489312-18489331	Msa0761310:CDS	40.0%
	GGAACTAAACCATACCTTAG+GGG	+	chr5_2:18489406-18489425	None:intergenic	40.0%
!!	AGATACTGATTCTTGTGTCC+TGG	+	chr5_2:18489527-18489546	None:intergenic	40.0%
	ACTGTTGACAGTAACAATCC+TGG	+	chr5_2:18489564-18489583	None:intergenic	40.0%
	TAACACACTGGTGAATCTCA+AGG	+	chr5_2:18489608-18489627	None:intergenic	40.0%
!!	GTTCGGATTGATAGCGAATT+TGG	-	chr5_2:18489695-18489714	Msa0761310:intron	40.0%
	AACTACGCCTTTGAGCTTTA+AGG	-	chr5_2:18489752-18489771	Msa0761310:intron	40.0%
!	ACTACGCCTTTGAGCTTTAA+GGG	-	chr5_2:18489753-18489772	Msa0761310:intron	40.0%
	CGCCTCAATAATTGTTTGCA+TGG	-	chr5_2:18489999-18490018	Msa0761310:CDS	40.0%
	TTCCCATGTGTTTAGGTAGA+TGG	-	chr5_2:18490060-18490079	Msa0761310:CDS	40.0%
	GACCATCTACCTAAACACAT+GGG	+	chr5_2:18490065-18490084	None:intergenic	40.0%
	TGACCATCTACCTAAACACA+TGG	+	chr5_2:18490066-18490085	None:intergenic	40.0%
	CAATCACTATTCAGGAATGC+AGG	-	chr5_2:18490117-18490136	Msa0761310:CDS	40.0%
	CTATTCAGGAATGCAGGTTA+TGG	-	chr5_2:18490123-18490142	Msa0761310:CDS	40.0%
!	AGGTGTCTCTAGGAAAATGA+TGG	-	chr5_2:18490150-18490169	Msa0761310:CDS	40.0%
!	TCCTTTGTATCAAGTTGCAG+TGG	-	chr5_2:18490521-18490540	Msa0761310:five_prime_UTR	40.0%
!!	AATGGGAGGAGTTTCAAGTT+TGG	+	chr5_2:18488308-18488327	None:intergenic	40.0%
	TAGCTCCAAGAAAAGACACA+TGG	-	chr5_2:18488456-18488475	Msa0761310:three_prime_UTR	40.0%
	GATGATGCATCAGTTCCATA+AGG	+	chr5_2:18488626-18488645	None:intergenic	40.0%
	CTTTCCTGTTGTGGTAAAAC+TGG	+	chr5_2:18488704-18488723	None:intergenic	40.0%
	TCTTCCATACTTTCCTGTTG+TGG	+	chr5_2:18488713-18488732	None:intergenic	40.0%
!	CAGGAAAGTATGGAAGAGTT+TGG	-	chr5_2:18488716-18488735	Msa0761310:CDS	40.0%
	TTGTTGGAAGTGAGAACAAG+AGG	-	chr5_2:18488741-18488760	Msa0761310:CDS	40.0%
!	TCCTTCAACCCTTTTGGATT+TGG	+	chr5_2:18488855-18488874	None:intergenic	40.0%
!!	GAAGAAAGCGTTTGAATGAC+AGG	-	chr5_2:18488909-18488928	Msa0761310:intron	40.0%
	AATTGTCCCTAAGATCAGCA+AGG	-	chr5_2:18488949-18488968	Msa0761310:intron	40.0%
	GAATCACCTTGCTGATCTTA+GGG	+	chr5_2:18488958-18488977	None:intergenic	40.0%
	TGAATCACCTTGCTGATCTT+AGG	+	chr5_2:18488959-18488978	None:intergenic	40.0%
	ATGGACAGGACATCAATTCT+TGG	-	chr5_2:18489240-18489259	Msa0761310:CDS	40.0%
	CAAGAAGAAATGGAGGAAGA+AGG	-	chr5_2:18489312-18489331	Msa0761310:CDS	40.0%
	GGAACTAAACCATACCTTAG+GGG	+	chr5_2:18489406-18489425	None:intergenic	40.0%
!!	AGATACTGATTCTTGTGTCC+TGG	+	chr5_2:18489527-18489546	None:intergenic	40.0%
	ACTGTTGACAGTAACAATCC+TGG	+	chr5_2:18489564-18489583	None:intergenic	40.0%
	TAACACACTGGTGAATCTCA+AGG	+	chr5_2:18489608-18489627	None:intergenic	40.0%
!!	GTTCGGATTGATAGCGAATT+TGG	-	chr5_2:18489695-18489714	Msa0761310:intron	40.0%
	AACTACGCCTTTGAGCTTTA+AGG	-	chr5_2:18489752-18489771	Msa0761310:intron	40.0%
!	ACTACGCCTTTGAGCTTTAA+GGG	-	chr5_2:18489753-18489772	Msa0761310:intron	40.0%
	CGCCTCAATAATTGTTTGCA+TGG	-	chr5_2:18489999-18490018	Msa0761310:CDS	40.0%
	TTCCCATGTGTTTAGGTAGA+TGG	-	chr5_2:18490060-18490079	Msa0761310:CDS	40.0%
	GACCATCTACCTAAACACAT+GGG	+	chr5_2:18490065-18490084	None:intergenic	40.0%
	TGACCATCTACCTAAACACA+TGG	+	chr5_2:18490066-18490085	None:intergenic	40.0%
	CAATCACTATTCAGGAATGC+AGG	-	chr5_2:18490117-18490136	Msa0761310:CDS	40.0%
	CTATTCAGGAATGCAGGTTA+TGG	-	chr5_2:18490123-18490142	Msa0761310:CDS	40.0%
!	AGGTGTCTCTAGGAAAATGA+TGG	-	chr5_2:18490150-18490169	Msa0761310:CDS	40.0%
!	TCCTTTGTATCAAGTTGCAG+TGG	-	chr5_2:18490521-18490540	Msa0761310:five_prime_UTR	40.0%
	GAGTCAAAGGTCCAACCATT+AGG	+	chr5_2:18488518-18488537	None:intergenic	45.0%
!	GGTGCTGAATCATCAAACTC+AGG	+	chr5_2:18488683-18488702	None:intergenic	45.0%
!	AGCACCAGTTTTACCACAAC+AGG	-	chr5_2:18488697-18488716	Msa0761310:CDS	45.0%
	GCCAAATCCAAAAGGGTTGA+AGG	-	chr5_2:18488851-18488870	Msa0761310:intron	45.0%
	ATGACAGGCTTTCCATGCTT+AGG	-	chr5_2:18488924-18488943	Msa0761310:intron	45.0%
	AGGGACAATTGACCTAAGCA+TGG	+	chr5_2:18488939-18488958	None:intergenic	45.0%
!	CAATCTGAAGTGTAAGAGCG+AGG	+	chr5_2:18489025-18489044	None:intergenic	45.0%
!!	CAGTAACAATCCTGGCTTTG+TGG	+	chr5_2:18489556-18489575	None:intergenic	45.0%
	ATTGCAAGCATCTTGCTCAG+AGG	-	chr5_2:18489650-18489669	Msa0761310:intron	45.0%
	TTCAGGAATGCAGGTTATGG+TGG	-	chr5_2:18490126-18490145	Msa0761310:CDS	45.0%
	TCAGGAATGCAGGTTATGGT+GGG	-	chr5_2:18490127-18490146	Msa0761310:CDS	45.0%
	GCCACTGCAACTTGATACAA+AGG	+	chr5_2:18490525-18490544	None:intergenic	45.0%
	GAGTCAAAGGTCCAACCATT+AGG	+	chr5_2:18488518-18488537	None:intergenic	45.0%
!	GGTGCTGAATCATCAAACTC+AGG	+	chr5_2:18488683-18488702	None:intergenic	45.0%
!	AGCACCAGTTTTACCACAAC+AGG	-	chr5_2:18488697-18488716	Msa0761310:CDS	45.0%
	GCCAAATCCAAAAGGGTTGA+AGG	-	chr5_2:18488851-18488870	Msa0761310:intron	45.0%
	ATGACAGGCTTTCCATGCTT+AGG	-	chr5_2:18488924-18488943	Msa0761310:intron	45.0%
	AGGGACAATTGACCTAAGCA+TGG	+	chr5_2:18488939-18488958	None:intergenic	45.0%
!	CAATCTGAAGTGTAAGAGCG+AGG	+	chr5_2:18489025-18489044	None:intergenic	45.0%
!!	CAGTAACAATCCTGGCTTTG+TGG	+	chr5_2:18489556-18489575	None:intergenic	45.0%
	ATTGCAAGCATCTTGCTCAG+AGG	-	chr5_2:18489650-18489669	Msa0761310:intron	45.0%
	TTCAGGAATGCAGGTTATGG+TGG	-	chr5_2:18490126-18490145	Msa0761310:CDS	45.0%
	TCAGGAATGCAGGTTATGGT+GGG	-	chr5_2:18490127-18490146	Msa0761310:CDS	45.0%
	GCCACTGCAACTTGATACAA+AGG	+	chr5_2:18490525-18490544	None:intergenic	45.0%
!	AGGCTGTCCTTCAACCCTTT+TGG	+	chr5_2:18488861-18488880	None:intergenic	50.0%
	TGATGTTGAGAGGAGAGACC+AGG	-	chr5_2:18489506-18489525	Msa0761310:CDS	50.0%
!!	TTATGGTGGGAGGTGTCTCT+AGG	-	chr5_2:18490140-18490159	Msa0761310:CDS	50.0%
!	AGGCTGTCCTTCAACCCTTT+TGG	+	chr5_2:18488861-18488880	None:intergenic	50.0%
	TGATGTTGAGAGGAGAGACC+AGG	-	chr5_2:18489506-18489525	Msa0761310:CDS	50.0%
!!	TTATGGTGGGAGGTGTCTCT+AGG	-	chr5_2:18490140-18490159	Msa0761310:CDS	50.0%
	ATCTGCTGTGCCACAAAGCC+AGG	-	chr5_2:18489543-18489562	Msa0761310:CDS	55.0%
!	GGAATGCAGGTTATGGTGGG+AGG	-	chr5_2:18490130-18490149	Msa0761310:CDS	55.0%
	ATCTGCTGTGCCACAAAGCC+AGG	-	chr5_2:18489543-18489562	Msa0761310:CDS	55.0%
!	GGAATGCAGGTTATGGTGGG+AGG	-	chr5_2:18490130-18490149	Msa0761310:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_2	gene	18488258	18490579	18488258	ID=Msa0761310;Name=Msa0761310
chr5_2	mRNA	18488258	18490579	18488258	ID=Msa0761310-mRNA-1;Parent=Msa0761310;Name=Msa0761310-mRNA-1;_AED=0.06;_eAED=0.06;_QI=161\|1\|1\|1\|1\|1\|4\|418\|325
chr5_2	exon	18488258	18488762	18488258	ID=Msa0761310-mRNA-1:exon:8050;Parent=Msa0761310-mRNA-1
chr5_2	exon	18489166	18489333	18489166	ID=Msa0761310-mRNA-1:exon:8049;Parent=Msa0761310-mRNA-1
chr5_2	exon	18489427	18489597	18489427	ID=Msa0761310-mRNA-1:exon:8048;Parent=Msa0761310-mRNA-1
chr5_2	exon	18489867	18490579	18489867	ID=Msa0761310-mRNA-1:exon:8047;Parent=Msa0761310-mRNA-1
chr5_2	five_prime_UTR	18490419	18490579	18490419	ID=Msa0761310-mRNA-1:five_prime_utr;Parent=Msa0761310-mRNA-1
chr5_2	CDS	18489867	18490418	18489867	ID=Msa0761310-mRNA-1:cds;Parent=Msa0761310-mRNA-1
chr5_2	CDS	18489427	18489597	18489427	ID=Msa0761310-mRNA-1:cds;Parent=Msa0761310-mRNA-1
chr5_2	CDS	18489166	18489333	18489166	ID=Msa0761310-mRNA-1:cds;Parent=Msa0761310-mRNA-1
chr5_2	CDS	18488676	18488762	18488676	ID=Msa0761310-mRNA-1:cds;Parent=Msa0761310-mRNA-1
chr5_2	three_prime_UTR	18488258	18488675	18488258	ID=Msa0761310-mRNA-1:three_prime_utr;Parent=Msa0761310-mRNA-1

Gene Sequence

>Msa0761310

ATGGAACTTTCTCAACTTGGTTTTCTTGAGGAGCTACTAGCTCCAAGAAAAGACACATGGAATACTTTATCCACTGGTTTGAATGAGTTACTACTTCCTAATGGTTGGACCTTTGACTCATTTGATGAAAATCTTCTCATCAATCCATCTTTAAACCCTTCATTTGCTTCATTCTCAACACCATTAGACCATAGATTTGAATGTCCTTATGGAACTGATGCATCATCATTATCATACCCTTATCTTGATGGATTCTCAGTTCCTGAGTTTGATGATTCAGCACCAGTTTTACCACAACAGGAAAGTATGGAAGAGTTTGGTTTTGTTGGAAGTGAGAACAAGAGGTTTCAAGAGAGTAAAATCAGCTGCAAAGTTGAGGAACAAGTTAGTGAAACTCCAGTTTTTAACATGGGTTTGTGTGGTGAGAAAAAAGCCAAATCCAAAAGGGTTGAAGGACAGCCTTCAAAGAATCTTATGGCTGAAAGAAGGAGAAGAAAGCGTTTGAATGACAGGCTTTCCATGCTTAGGTCAATTGTCCCTAAGATCAGCAAGATGGACAGGACATCAATTCTTGGAGATACAATTGATTACATGAAAGAGCTTCTAGAAAGGATTAGTAAGTTACAAGAAGAAATGGAGGAAGAAGGAACAAATCAGATAAACCTTTTAGGAATTTCTAAGGAGTTAAAGCCAAATGAAGTAATGGTAAGAAATTCCCCTAAGTTTGATGTTGAGAGGAGAGACCAGGACACAAGAATCAGTATCTGCTGTGCCACAAAGCCAGGATTGTTACTGTCAACAGTGAACACATTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGTTTCAATGATTTTTCATTGCAAGCATCTTGCTCAGAGGTAGATGGTCAGAGAAATTGTATGAACCCTGAAGAGATAAAGCAATCACTATTCAGGAATGCAGGTTATGGTGGGAGGTGTCTCTAG

Protein sequence

>Msa0761310

MELSQLGFLEELLAPRKDTWNTLSTGLNELLLPNGWTFDSFDENLLINPSLNPSFASFSTPLDHRFECPYGTDASSLSYPYLDGFSVPEFDDSAPVLPQQESMEEFGFVGSENKRFQESKISCKVEEQVSETPVFNMGLCGEKKAKSKRVEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERISKLQEEMEEEGTNQINLLGISKELKPNEVMVRNSPKFDVERRDQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSLQASCSEVDGQRNCMNPEEIKQSLFRNAGYGGRCL*