Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315890 | XP_013444510.1 | 97.207 | 358 | 6 | 1 | 1 | 358 | 1 | 354 | 0.0 | 713 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315890 | sp|Q7TND5|RPF1_MOUSE | 50.154 | 325 | 133 | 5 | 36 | 358 | 52 | 349 | 1.27e-95 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315890 | A0A072TYA8 | 97.207 | 358 | 6 | 1 | 1 | 358 | 1 | 354 | 0.0 | 713 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008200 | Msa1315890 | 0.813867 | 2.059040e-51 | -8.615850e-47 |
| Msa0010490 | Msa1315890 | 0.811716 | 6.091986e-51 | -8.615850e-47 |
| Msa0010500 | Msa1315890 | 0.802746 | 4.846752e-49 | -8.615850e-47 |
| Msa0020390 | Msa1315890 | 0.810602 | 1.062438e-50 | -8.615850e-47 |
| Msa0024930 | Msa1315890 | 0.826739 | 2.299394e-54 | -8.615850e-47 |
| Msa0032810 | Msa1315890 | 0.864077 | 1.576041e-64 | -8.615850e-47 |
| Msa0033110 | Msa1315890 | 0.803102 | 4.092471e-49 | -8.615850e-47 |
| Msa0033260 | Msa1315890 | 0.801943 | 7.093398e-49 | -8.615850e-47 |
| Msa0036540 | Msa1315890 | 0.806656 | 7.400098e-50 | -8.615850e-47 |
| Msa0037250 | Msa1315890 | 0.816976 | 4.189503e-52 | -8.615850e-47 |
| Msa0044990 | Msa1315890 | 0.829733 | 4.364393e-55 | -8.615850e-47 |
| Msa0059950 | Msa1315890 | 0.804916 | 1.716638e-49 | -8.615850e-47 |
| Msa0068020 | Msa1315890 | 0.819826 | 9.471893e-53 | -8.615850e-47 |
| Msa0072420 | Msa1315890 | 0.877524 | 5.864599e-69 | -8.615850e-47 |
| Msa0086750 | Msa1315890 | 0.802152 | 6.424974e-49 | -8.615850e-47 |
| Msa0090520 | Msa1315890 | 0.813996 | 1.929277e-51 | -8.615850e-47 |
| Msa0091410 | Msa1315890 | 0.804447 | 2.151224e-49 | -8.615850e-47 |
| Msa0115870 | Msa1315890 | 0.849950 | 2.327227e-60 | -8.615850e-47 |
| Msa0116380 | Msa1315890 | 0.814597 | 1.421037e-51 | -8.615850e-47 |
| Msa0610550 | Msa1315890 | 0.838665 | 2.512967e-57 | -8.615850e-47 |
| Msa0615580 | Msa1315890 | 0.850678 | 1.454261e-60 | -8.615850e-47 |
| Msa0616870 | Msa1315890 | -0.808303 | 3.309200e-50 | -8.615850e-47 |
| Msa0628410 | Msa1315890 | 0.805450 | 1.326896e-49 | -8.615850e-47 |
| Msa0634890 | Msa1315890 | 0.850523 | 1.607633e-60 | -8.615850e-47 |
| Msa0642160 | Msa1315890 | 0.803443 | 3.477919e-49 | -8.615850e-47 |
| Msa0642970 | Msa1315890 | 0.808075 | 3.700754e-50 | -8.615850e-47 |
| Msa0661300 | Msa1315890 | 0.807832 | 4.169514e-50 | -8.615850e-47 |
| Msa0664560 | Msa1315890 | 0.841419 | 4.806054e-58 | -8.615850e-47 |
| Msa0665100 | Msa1315890 | 0.804690 | 1.913939e-49 | -8.615850e-47 |
| Msa0666230 | Msa1315890 | 0.803994 | 2.671851e-49 | -8.615850e-47 |
| Msa0669520 | Msa1315890 | 0.802861 | 4.588889e-49 | -8.615850e-47 |
| Msa0672100 | Msa1315890 | 0.837172 | 6.078826e-57 | -8.615850e-47 |
| Msa0689440 | Msa1315890 | 0.804204 | 2.417236e-49 | -8.615850e-47 |
| Msa0693210 | Msa1315890 | 0.826305 | 2.918823e-54 | -8.615850e-47 |
| Msa0698780 | Msa1315890 | 0.863120 | 3.123367e-64 | -8.615850e-47 |
| Msa0712860 | Msa1315890 | 0.826801 | 2.222678e-54 | -8.615850e-47 |
| Msa0741440 | Msa1315890 | 0.833473 | 5.225816e-56 | -8.615850e-47 |
| Msa0776560 | Msa1315890 | 0.808112 | 3.635073e-50 | -8.615850e-47 |
| Msa0780930 | Msa1315890 | 0.821836 | 3.266840e-53 | -8.615850e-47 |
| Msa0786750 | Msa1315890 | 0.803964 | 2.710791e-49 | -8.615850e-47 |
| Msa0796580 | Msa1315890 | -0.806692 | 7.269839e-50 | -8.615850e-47 |
| Msa0800370 | Msa1315890 | 0.815404 | 9.407374e-52 | -8.615850e-47 |
| Msa0800480 | Msa1315890 | 0.821939 | 3.091848e-53 | -8.615850e-47 |
| Msa0808800 | Msa1315890 | 0.807935 | 3.963166e-50 | -8.615850e-47 |
| Msa0822500 | Msa1315890 | 0.816898 | 4.362093e-52 | -8.615850e-47 |
| Msa0828590 | Msa1315890 | 0.821454 | 4.002613e-53 | -8.615850e-47 |
| Msa0831100 | Msa1315890 | 0.800962 | 1.126883e-48 | -8.615850e-47 |
| Msa0841860 | Msa1315890 | 0.810787 | 9.687710e-51 | -8.615850e-47 |
| Msa0120880 | Msa1315890 | 0.870959 | 9.832686e-67 | -8.615850e-47 |
| Msa0137990 | Msa1315890 | 0.812763 | 3.600187e-51 | -8.615850e-47 |
| Msa0140770 | Msa1315890 | -0.818554 | 1.845154e-52 | -8.615850e-47 |
| Msa0172930 | Msa1315890 | 0.809233 | 2.094217e-50 | -8.615850e-47 |
| Msa0177960 | Msa1315890 | 0.821356 | 4.217144e-53 | -8.615850e-47 |
| Msa0183900 | Msa1315890 | 0.809259 | 2.067298e-50 | -8.615850e-47 |
| Msa0186540 | Msa1315890 | 0.818355 | 2.047059e-52 | -8.615850e-47 |
| Msa0190590 | Msa1315890 | 0.838878 | 2.213889e-57 | -8.615850e-47 |
| Msa0199340 | Msa1315890 | 0.818972 | 1.482825e-52 | -8.615850e-47 |
| Msa0202490 | Msa1315890 | 0.831459 | 1.649063e-55 | -8.615850e-47 |
| Msa0204960 | Msa1315890 | 0.856016 | 4.276182e-62 | -8.615850e-47 |
| Msa0207670 | Msa1315890 | 0.846064 | 2.745959e-59 | -8.615850e-47 |
| Msa0209350 | Msa1315890 | 0.840657 | 7.618836e-58 | -8.615850e-47 |
| Msa0209500 | Msa1315890 | 0.821428 | 4.059287e-53 | -8.615850e-47 |
| Msa0217670 | Msa1315890 | 0.814152 | 1.781899e-51 | -8.615850e-47 |
| Msa0218720 | Msa1315890 | 0.842021 | 3.333833e-58 | -8.615850e-47 |
| Msa0229150 | Msa1315890 | 0.800391 | 1.473198e-48 | -8.615850e-47 |
| Msa0230490 | Msa1315890 | 0.821509 | 3.888994e-53 | -8.615850e-47 |
| Msa0230520 | Msa1315890 | 0.855104 | 7.893535e-62 | -8.615850e-47 |
| Msa0232790 | Msa1315890 | 0.817218 | 3.696711e-52 | -8.615850e-47 |
| Msa1228040 | Msa1315890 | 0.802374 | 5.784194e-49 | -8.615850e-47 |
| Msa1234830 | Msa1315890 | 0.800284 | 1.549020e-48 | -8.615850e-47 |
| Msa1235610 | Msa1315890 | 0.844574 | 6.948280e-59 | -8.615850e-47 |
| Msa1254730 | Msa1315890 | 0.800641 | 1.309962e-48 | -8.615850e-47 |
| Msa1262890 | Msa1315890 | 0.830672 | 2.573479e-55 | -8.615850e-47 |
| Msa1264210 | Msa1315890 | 0.836680 | 8.119925e-57 | -8.615850e-47 |
| Msa1265630 | Msa1315890 | 0.801809 | 7.556422e-49 | -8.615850e-47 |
| Msa1275680 | Msa1315890 | 0.814740 | 1.320719e-51 | -8.615850e-47 |
| Msa1277260 | Msa1315890 | 0.960792 | 5.852509e-119 | -8.615850e-47 |
| Msa1277410 | Msa1315890 | 0.808453 | 3.074374e-50 | -8.615850e-47 |
| Msa1296830 | Msa1315890 | 0.802734 | 4.874977e-49 | -8.615850e-47 |
| Msa1300620 | Msa1315890 | 0.839307 | 1.713456e-57 | -8.615850e-47 |
| Msa1307160 | Msa1315890 | 0.800870 | 1.176682e-48 | -8.615850e-47 |
| Msa1307180 | Msa1315890 | 0.808604 | 2.854257e-50 | -8.615850e-47 |
| Msa1315890 | Msa1316360 | 0.818624 | 1.778424e-52 | -8.615850e-47 |
| Msa1315890 | Msa1329730 | 0.852564 | 4.249376e-61 | -8.615850e-47 |
| Msa1315890 | Msa1329750 | 0.855553 | 5.840529e-62 | -8.615850e-47 |
| Msa1315890 | Msa1331250 | 0.806874 | 6.654292e-50 | -8.615850e-47 |
| Msa1315890 | Msa1332590 | 0.810434 | 1.154853e-50 | -8.615850e-47 |
| Msa1315890 | Msa1336560 | 0.817055 | 4.021043e-52 | -8.615850e-47 |
| Msa1315890 | Msa1341060 | 0.859974 | 2.853453e-63 | -8.615850e-47 |
| Msa1315890 | Msa1351540 | 0.847887 | 8.701746e-60 | -8.615850e-47 |
| Msa1315890 | Msa1364350 | -0.809924 | 1.487641e-50 | -8.615850e-47 |
| Msa1315890 | Msa1365800 | 0.808018 | 3.805452e-50 | -8.615850e-47 |
| Msa1315890 | Msa1368530 | 0.807235 | 5.581558e-50 | -8.615850e-47 |
| Msa1315890 | Msa1368710 | 0.820880 | 5.428849e-53 | -8.615850e-47 |
| Msa1315890 | Msa1374830 | 0.847016 | 1.509355e-59 | -8.615850e-47 |
| Msa1315890 | Msa1376660 | 0.838524 | 2.732831e-57 | -8.615850e-47 |
| Msa1315890 | Msa1385720 | 0.851814 | 6.947043e-61 | -8.615850e-47 |
| Msa1315890 | Msa1392980 | 0.802028 | 6.811662e-49 | -8.615850e-47 |
| Msa1315890 | Msa1411970 | 0.845361 | 4.259898e-59 | -8.615850e-47 |
| Msa1315890 | Msa1418070 | 0.800670 | 1.292797e-48 | -8.615850e-47 |
| Msa1315890 | Msa1420430 | 0.847788 | 9.262873e-60 | -8.615850e-47 |
| Msa1315890 | Msa1434090 | 0.852128 | 5.654565e-61 | -8.615850e-47 |
| Msa1315890 | Msa1435390 | 0.856873 | 2.396708e-62 | -8.615850e-47 |
| Msa1315890 | Msa1437860 | 0.819027 | 1.440419e-52 | -8.615850e-47 |
| Msa1315890 | Msa1440930 | 0.811372 | 7.234381e-51 | -8.615850e-47 |
| Msa1315890 | Msa1445370 | 0.847441 | 1.154419e-59 | -8.615850e-47 |
| Msa1315890 | Msa1454680 | 0.807011 | 6.225416e-50 | -8.615850e-47 |
| Msa0371500 | Msa1315890 | 0.803295 | 3.731174e-49 | -8.615850e-47 |
| Msa0377820 | Msa1315890 | 0.846827 | 1.700200e-59 | -8.615850e-47 |
| Msa0385500 | Msa1315890 | 0.885214 | 9.857686e-72 | -8.615850e-47 |
| Msa0404630 | Msa1315890 | 0.809413 | 1.915992e-50 | -8.615850e-47 |
| Msa0419720 | Msa1315890 | 0.805528 | 1.278146e-49 | -8.615850e-47 |
| Msa0423750 | Msa1315890 | 0.829327 | 5.476573e-55 | -8.615850e-47 |
| Msa0426580 | Msa1315890 | 0.866357 | 3.026174e-65 | -8.615850e-47 |
| Msa0431980 | Msa1315890 | 0.836323 | 1.000678e-56 | -8.615850e-47 |
| Msa0437020 | Msa1315890 | 0.863722 | 2.032611e-64 | -8.615850e-47 |
| Msa0443390 | Msa1315890 | 0.836711 | 7.971231e-57 | -8.615850e-47 |
| Msa0458370 | Msa1315890 | -0.822012 | 2.973698e-53 | -8.615850e-47 |
| Msa0460740 | Msa1315890 | 0.818022 | 2.434222e-52 | -8.615850e-47 |
| Msa0462600 | Msa1315890 | 0.846544 | 2.032040e-59 | -8.615850e-47 |
| Msa0472930 | Msa1315890 | 0.844494 | 7.304129e-59 | -8.615850e-47 |
| Msa0479760 | Msa1315890 | -0.815886 | 7.345367e-52 | -8.615850e-47 |
| Msa0992550 | Msa1315890 | 0.821210 | 4.557371e-53 | -8.615850e-47 |
| Msa1021520 | Msa1315890 | 0.876635 | 1.193821e-68 | -8.615850e-47 |
| Msa1039810 | Msa1315890 | 0.835646 | 1.486396e-56 | -8.615850e-47 |
| Msa1059300 | Msa1315890 | 0.804394 | 2.206533e-49 | -8.615850e-47 |
| Msa1060260 | Msa1315890 | 0.844806 | 6.016788e-59 | -8.615850e-47 |
| Msa1072710 | Msa1315890 | 0.812633 | 3.842920e-51 | -8.615850e-47 |
| Msa1085420 | Msa1315890 | 0.801484 | 8.808995e-49 | -8.615850e-47 |
| Msa1104210 | Msa1315890 | 0.802151 | 6.428808e-49 | -8.615850e-47 |
| Msa1105510 | Msa1315890 | 0.854599 | 1.105323e-61 | -8.615850e-47 |
| Msa0245580 | Msa1315890 | 0.822090 | 2.852333e-53 | -8.615850e-47 |
| Msa0249580 | Msa1315890 | 0.803723 | 3.042808e-49 | -8.615850e-47 |
| Msa0256140 | Msa1315890 | 0.836884 | 7.202929e-57 | -8.615850e-47 |
| Msa0257490 | Msa1315890 | 0.849252 | 3.643700e-60 | -8.615850e-47 |
| Msa0258390 | Msa1315890 | 0.849016 | 4.236835e-60 | -8.615850e-47 |
| Msa0272300 | Msa1315890 | 0.823022 | 1.731892e-53 | -8.615850e-47 |
| Msa0280370 | Msa1315890 | 0.847058 | 1.470300e-59 | -8.615850e-47 |
| Msa0281530 | Msa1315890 | 0.867982 | 9.153739e-66 | -8.615850e-47 |
| Msa0284180 | Msa1315890 | 0.830422 | 2.963828e-55 | -8.615850e-47 |
| Msa0296250 | Msa1315890 | 0.828725 | 7.662620e-55 | -8.615850e-47 |
| Msa0296630 | Msa1315890 | -0.812632 | 3.845358e-51 | -8.615850e-47 |
| Msa0296790 | Msa1315890 | 0.835405 | 1.710185e-56 | -8.615850e-47 |
| Msa0297610 | Msa1315890 | 0.845443 | 4.047934e-59 | -8.615850e-47 |
| Msa0306690 | Msa1315890 | 0.803159 | 3.981075e-49 | -8.615850e-47 |
| Msa0317910 | Msa1315890 | 0.849640 | 2.839808e-60 | -8.615850e-47 |
| Msa0319640 | Msa1315890 | 0.841023 | 6.110892e-58 | -8.615850e-47 |
| Msa0320590 | Msa1315890 | 0.844645 | 6.651008e-59 | -8.615850e-47 |
| Msa0322240 | Msa1315890 | 0.829258 | 5.692748e-55 | -8.615850e-47 |
| Msa0343500 | Msa1315890 | 0.859838 | 3.136019e-63 | -8.615850e-47 |
| Msa0348830 | Msa1315890 | 0.841015 | 6.138875e-58 | -8.615850e-47 |
| Msa0357900 | Msa1315890 | 0.830991 | 2.149808e-55 | -8.615850e-47 |
| Msa0358770 | Msa1315890 | 0.801437 | 9.010168e-49 | -8.615850e-47 |
| Msa1122310 | Msa1315890 | -0.847781 | 9.307369e-60 | -8.615850e-47 |
| Msa1123770 | Msa1315890 | 0.853623 | 2.113833e-61 | -8.615850e-47 |
| Msa1123780 | Msa1315890 | 0.802569 | 5.272427e-49 | -8.615850e-47 |
| Msa1126830 | Msa1315890 | 0.839033 | 2.018615e-57 | -8.615850e-47 |
| Msa1128270 | Msa1315890 | 0.805131 | 1.548272e-49 | -8.615850e-47 |
| Msa1128280 | Msa1315890 | 0.845528 | 3.840361e-59 | -8.615850e-47 |
| Msa1165270 | Msa1315890 | 0.855621 | 5.579740e-62 | -8.615850e-47 |
| Msa1165780 | Msa1315890 | 0.857228 | 1.883044e-62 | -8.615850e-47 |
| Msa1169910 | Msa1315890 | 0.847149 | 1.388525e-59 | -8.615850e-47 |
| Msa1175350 | Msa1315890 | 0.927004 | 2.146526e-91 | -8.615850e-47 |
| Msa1195300 | Msa1315890 | 0.817433 | 3.306319e-52 | -8.615850e-47 |
| Msa1205890 | Msa1315890 | 0.816456 | 5.477654e-52 | -8.615850e-47 |
| Msa1208020 | Msa1315890 | 0.832649 | 8.381710e-56 | -8.615850e-47 |
| Msa1209200 | Msa1315890 | 0.827627 | 1.409040e-54 | -8.615850e-47 |
| Msa0511770 | Msa1315890 | 0.801027 | 1.092814e-48 | -8.615850e-47 |
| Msa0517590 | Msa1315890 | 0.858334 | 8.848832e-63 | -8.615850e-47 |
| Msa0520850 | Msa1315890 | 0.822463 | 2.337118e-53 | -8.615850e-47 |
| Msa0527540 | Msa1315890 | 0.812624 | 3.860022e-51 | -8.615850e-47 |
| Msa0531230 | Msa1315890 | 0.803826 | 2.896562e-49 | -8.615850e-47 |
| Msa0531650 | Msa1315890 | 0.811536 | 6.665577e-51 | -8.615850e-47 |
| Msa0534750 | Msa1315890 | 0.819760 | 9.803980e-53 | -8.615850e-47 |
| Msa0547160 | Msa1315890 | 0.804356 | 2.246897e-49 | -8.615850e-47 |
| Msa0549450 | Msa1315890 | 0.850434 | 1.701948e-60 | -8.615850e-47 |
| Msa0566940 | Msa1315890 | -0.802394 | 5.729172e-49 | -8.615850e-47 |
| Msa0581110 | Msa1315890 | 0.835584 | 1.541059e-56 | -8.615850e-47 |
| Msa0581280 | Msa1315890 | 0.831619 | 1.506394e-55 | -8.615850e-47 |
| Msa0584260 | Msa1315890 | 0.831273 | 1.833293e-55 | -8.615850e-47 |
| Msa0586420 | Msa1315890 | 0.807982 | 3.873667e-50 | -8.615850e-47 |
| Msa0588260 | Msa1315890 | 0.826127 | 3.217091e-54 | -8.615850e-47 |
| Msa0588360 | Msa1315890 | 0.812384 | 4.356825e-51 | -8.615850e-47 |
| Msa0588630 | Msa1315890 | -0.828512 | 8.626088e-55 | -8.615850e-47 |
| Msa0595170 | Msa1315890 | 0.810189 | 1.304701e-50 | -8.615850e-47 |
| Msa0870750 | Msa1315890 | 0.842899 | 1.950847e-58 | -8.615850e-47 |
| Msa0892640 | Msa1315890 | 0.811447 | 6.970521e-51 | -8.615850e-47 |
| Msa0903870 | Msa1315890 | 0.811154 | 8.069570e-51 | -8.615850e-47 |
| Msa0913240 | Msa1315890 | 0.812493 | 4.123151e-51 | -8.615850e-47 |
| Msa0936480 | Msa1315890 | 0.813154 | 2.954891e-51 | -8.615850e-47 |
| Msa0944200 | Msa1315890 | 0.804750 | 1.859343e-49 | -8.615850e-47 |
| Msa0958000 | Msa1315890 | 0.855630 | 5.546788e-62 | -8.615850e-47 |
| Msa0973420 | Msa1315890 | 0.803736 | 3.023090e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315890 | MtrunA17_Chr8g0345651 | 97.207 | 358 | 6 | 1 | 1 | 358 | 1 | 354 | 0.0 | 713 |
| Msa1315890 | MtrunA17_Chr3g0084381 | 33.562 | 292 | 141 | 7 | 70 | 358 | 50 | 291 | 5.08e-43 | 150 |
| Msa1315890 | MtrunA17_Chr1g0176411 | 80.357 | 56 | 11 | 0 | 40 | 95 | 1 | 56 | 3.56e-20 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315890 | AT4G01560.1 | 73.669 | 357 | 79 | 4 | 3 | 358 | 1 | 343 | 0.0 | 528 |
| Msa1315890 | AT1G63780.1 | 38.776 | 245 | 122 | 6 | 117 | 358 | 73 | 292 | 9.07e-46 | 158 |
Find 98 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGATGCTCTCTTGATTAT+TGG | 0.136869 | 8_4:+15476702 | Msa1315890:intron |
| CTTCGACTTGTGTCCATTTC+CGG | 0.170540 | 8_4:-15478982 | None:intergenic |
| TATTCATTCGTGACGAATTT+AGG | 0.200166 | 8_4:+15479332 | Msa1315890:three_prime_UTR |
| TGTCTTGGAACTTTGCATTT+TGG | 0.220254 | 8_4:+15479024 | Msa1315890:three_prime_UTR |
| CCCCAAGATCCCGAGTTTAA+AGG | 0.228228 | 8_4:+15477647 | Msa1315890:CDS |
| CCCTTTAAACTCGGGATCTT+GGG | 0.231737 | 8_4:-15477648 | None:intergenic |
| TTCCGTTTCTGTTTCCGTTC+TGG | 0.284839 | 8_4:-15473373 | None:intergenic |
| CAGCTGGAACTTGGTTAATC+TGG | 0.296287 | 8_4:+15479056 | Msa1315890:three_prime_UTR |
| GCCCTTTAAACTCGGGATCT+TGG | 0.298570 | 8_4:-15477649 | None:intergenic |
| TAAAACAATTGCCCGTCTTC+AGG | 0.332177 | 8_4:+15477898 | Msa1315890:CDS |
| GCAAGTGGTGATTAATATCT+TGG | 0.337449 | 8_4:-15476127 | None:intergenic |
| ATTTGTTTGCAGCTATTTGC+TGG | 0.345769 | 8_4:+15476057 | Msa1315890:intron |
| TTTAATATCAGAATTGCTTC+AGG | 0.350037 | 8_4:+15476375 | Msa1315890:CDS |
| AAATGAGCAGTAGGTCCTTC+AGG | 0.362193 | 8_4:-15476729 | None:intergenic |
| CTCTTGAAGTAATGTGCATT+TGG | 0.364971 | 8_4:-15476403 | None:intergenic |
| CCCAAGATCCCGAGTTTAAA+GGG | 0.366033 | 8_4:+15477648 | Msa1315890:CDS |
| TTTCCACCGATCGCCATTGT+AGG | 0.381132 | 8_4:-15473297 | None:intergenic |
| TGTTGAATATGCAAACAAAA+AGG | 0.392477 | 8_4:+15476546 | Msa1315890:CDS |
| AACTCAACCTCTTCATCATC+AGG | 0.420118 | 8_4:-15473705 | None:intergenic |
| ATTAAACTTAGAGATCTCTA+TGG | 0.431932 | 8_4:-15479285 | None:intergenic |
| TCAACAAACATATAGATTTG+TGG | 0.437200 | 8_4:-15479200 | None:intergenic |
| TGTGTCCCCTTGCAGAATCA+TGG | 0.442254 | 8_4:+15477204 | Msa1315890:intron |
| TAATCATCGAAGGACGGAAC+GGG | 0.458251 | 8_4:-15473404 | None:intergenic |
| ACTGCATTTCAGCTGGAACT+TGG | 0.475547 | 8_4:+15479047 | Msa1315890:three_prime_UTR |
| AGCTCAGGCTGGTGACTGGT+TGG | 0.478829 | 8_4:-15477231 | None:intergenic |
| CACTTGCCGCTTCAATTCTA+CGG | 0.479733 | 8_4:+15476143 | Msa1315890:CDS |
| GCTCAGGCTGGTGACTGGTT+GGG | 0.480294 | 8_4:-15477230 | None:intergenic |
| GTCTTCGGCACCTTCTTCTC+CGG | 0.480606 | 8_4:-15473642 | None:intergenic |
| TGTCAAATGTTCCATGCTGC+AGG | 0.481553 | 8_4:-15478810 | None:intergenic |
| ATCACACTGAAGGCTTTCAT+AGG | 0.487342 | 8_4:-15479409 | None:intergenic |
| ATATGAAGTCTCTCTGGTTG+TGG | 0.489756 | 8_4:-15477688 | None:intergenic |
| AACCAGAACGGAAACAGAAA+CGG | 0.491238 | 8_4:+15473371 | Msa1315890:CDS |
| AGAGAGACTTCATATTCTTC+CGG | 0.494821 | 8_4:+15477696 | Msa1315890:CDS |
| CGAAGACGATTGAAAATACA+AGG | 0.499632 | 8_4:+15473658 | Msa1315890:CDS |
| TACACGTCGCCCTTTAAACT+CGG | 0.500125 | 8_4:-15477657 | None:intergenic |
| CACAAGCTCAGGCTGGTGAC+TGG | 0.500662 | 8_4:-15477235 | None:intergenic |
| CAAGTGGTGATTAATATCTT+GGG | 0.501651 | 8_4:-15476126 | None:intergenic |
| CTTCTTCTGATGCTTAAGCT+TGG | 0.508564 | 8_4:-15473457 | None:intergenic |
| AGAGAAGAAGAAAAGGATTG+AGG | 0.512078 | 8_4:-15473247 | None:intergenic |
| AAGTTGTTCAACACAAGCTC+AGG | 0.513960 | 8_4:-15477246 | None:intergenic |
| CCTTTAAACTCGGGATCTTG+GGG | 0.514110 | 8_4:-15477647 | None:intergenic |
| GTTGTAGCCTCCGGAGAAGA+AGG | 0.514510 | 8_4:+15473632 | Msa1315890:intron |
| TTGATTATTGGCTTACCTGA+AGG | 0.520117 | 8_4:+15476714 | Msa1315890:CDS |
| TCATATTCTTCCGGCATCAT+CGG | 0.521685 | 8_4:+15477705 | Msa1315890:CDS |
| GGAAGAATATGAAGTCTCTC+TGG | 0.523080 | 8_4:-15477694 | None:intergenic |
| CCTACTTGGTTCCCTACGAT+TGG | 0.527299 | 8_4:-15476596 | None:intergenic |
| AGCAATTCTGATATTAAAGC+AGG | 0.533676 | 8_4:-15476370 | None:intergenic |
| AACAACTTCACAACACGCCT+AGG | 0.543084 | 8_4:+15477261 | Msa1315890:CDS |
| TCTTTGTTCTTAATCATCGA+AGG | 0.545212 | 8_4:-15473414 | None:intergenic |
| GGAACATTTGACACTAAAAG+TGG | 0.547527 | 8_4:+15478820 | Msa1315890:CDS |
| CTAAAAGTGGAGAATATGAG+TGG | 0.547620 | 8_4:+15478833 | Msa1315890:CDS |
| ATTGACACCAACCTGAAGAC+GGG | 0.550528 | 8_4:-15477909 | None:intergenic |
| CAATGGCGATCGGTGGAAAG+AGG | 0.566083 | 8_4:+15473301 | Msa1315890:exon |
| TTAATCATCGAAGGACGGAA+CGG | 0.568387 | 8_4:-15473405 | None:intergenic |
| GTGAGTTTGAAATGAGCAGT+AGG | 0.571962 | 8_4:-15476738 | None:intergenic |
| ATCAGTGTTGTGTACAAAGA+TGG | 0.576657 | 8_4:-15479167 | None:intergenic |
| CGTGGTGGTTATTCCTACAA+TGG | 0.577161 | 8_4:+15473284 | Msa1315890:exon |
| AAGTTCCAAGACAAGGTCAC+AGG | 0.582687 | 8_4:-15479014 | None:intergenic |
| AAGAATTGTACCGATGATGC+CGG | 0.586114 | 8_4:-15477715 | None:intergenic |
| GTTAAAAGAGCTATTGAGCT+CGG | 0.586757 | 8_4:+15473519 | Msa1315890:CDS |
| AATTGACACCAACCTGAAGA+CGG | 0.586946 | 8_4:-15477910 | None:intergenic |
| TGTTCTTAATCATCGAAGGA+CGG | 0.587385 | 8_4:-15473410 | None:intergenic |
| TTGCAAGCCTGATGATGAAG+AGG | 0.594460 | 8_4:+15473698 | Msa1315890:CDS |
| GAAGTCTCTCTGGTTGTGGA+AGG | 0.594781 | 8_4:-15477684 | None:intergenic |
| TGTTCAACACAAGCTCAGGC+TGG | 0.595435 | 8_4:-15477242 | None:intergenic |
| AATTCAGTTCAATATTAAAG+CGG | 0.596200 | 8_4:+15476094 | Msa1315890:CDS |
| ACCTTCCAACTCGATGCCCT+AGG | 0.597115 | 8_4:-15477278 | None:intergenic |
| AGAATATGAGTGGGTTCACA+AGG | 0.597660 | 8_4:+15478843 | Msa1315890:CDS |
| GGAAACAGAAACGGAAACGA+AGG | 0.598065 | 8_4:+15473380 | Msa1315890:CDS |
| TTCGGCACCTTCTTCTCCGG+AGG | 0.599893 | 8_4:-15473639 | None:intergenic |
| TTCATAGGCTAGATGATGCA+AGG | 0.601774 | 8_4:-15479394 | None:intergenic |
| TAGTTGTACACACCAATCGT+AGG | 0.607640 | 8_4:+15476584 | Msa1315890:CDS |
| CGTAGAATTGAAGCGGCAAG+TGG | 0.609118 | 8_4:-15476142 | None:intergenic |
| GTTATTCCTACAATGGCGAT+CGG | 0.609248 | 8_4:+15473291 | Msa1315890:exon |
| AGCTATTGAGCTCGGCGAAG+AGG | 0.611918 | 8_4:+15473527 | Msa1315890:CDS |
| AACATACCGTAGAATTGAAG+CGG | 0.614066 | 8_4:-15476149 | None:intergenic |
| GTGTTGTGTACAAAGATGGT+AGG | 0.617202 | 8_4:-15479163 | None:intergenic |
| TTAACTTCAATGTGAAACGA+GGG | 0.623098 | 8_4:-15478783 | None:intergenic |
| ACACGTCGCCCTTTAAACTC+GGG | 0.626716 | 8_4:-15477656 | None:intergenic |
| CGGAAATGGACACAAGTCGA+AGG | 0.626913 | 8_4:+15478983 | Msa1315890:CDS |
| TCATTCGTGACGAATTTAGG+TGG | 0.627239 | 8_4:+15479335 | Msa1315890:three_prime_UTR |
| GCCTAGGGCATCGAGTTGGA+AGG | 0.627771 | 8_4:+15477277 | Msa1315890:CDS |
| ACACGCCTAGGGCATCGAGT+TGG | 0.629464 | 8_4:+15477273 | Msa1315890:CDS |
| GTAGGAATAACCACCACGCG+AGG | 0.633022 | 8_4:-15473279 | None:intergenic |
| ACAACTTCACAACACGCCTA+GGG | 0.637320 | 8_4:+15477262 | Msa1315890:CDS |
| AGTTGTACACACCAATCGTA+GGG | 0.643789 | 8_4:+15476585 | Msa1315890:CDS |
| TAGGAATAACCACCACGCGA+GGG | 0.643791 | 8_4:-15473278 | None:intergenic |
| ATTCCTACAATGGCGATCGG+TGG | 0.646182 | 8_4:+15473294 | Msa1315890:exon |
| AATGCACATTACTTCAAGAG+AGG | 0.646448 | 8_4:+15476406 | Msa1315890:CDS |
| AAGCGCAACAATGATTCAGA+CGG | 0.648847 | 8_4:+15473324 | Msa1315890:CDS |
| TTCCAAGAGGAAAACCAGAA+CGG | 0.649098 | 8_4:+15473359 | Msa1315890:CDS |
| AAATGCAAAGTTCCAAGACA+AGG | 0.656551 | 8_4:-15479021 | None:intergenic |
| TAAAAGTGGAGAATATGAGT+GGG | 0.666851 | 8_4:+15478834 | Msa1315890:CDS |
| CTTTAAACTCGGGATCTTGG+GGG | 0.666978 | 8_4:-15477646 | None:intergenic |
| AAATGGACACAAGTCGAAGG+AGG | 0.670517 | 8_4:+15478986 | Msa1315890:CDS |
| TTTAACTTCAATGTGAAACG+AGG | 0.679925 | 8_4:-15478784 | None:intergenic |
| GCGAAGATAATTCTTCCAAG+AGG | 0.695487 | 8_4:+15473346 | Msa1315890:CDS |
| GAAGACGATTGAAAATACAA+GGG | 0.727075 | 8_4:+15473659 | Msa1315890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTTCTTTTTTTTTTTT+GGG | + | chr8_4:15474630-15474649 | Msa1315890:intron | 10.0% |
| !!! | ACTTTTTTTTTTTTTTTTAC+AGG | - | chr8_4:15476958-15476977 | None:intergenic | 10.0% |
| !!! | ATATTTGTTATAATGAAAAA+TGG | - | chr8_4:15477514-15477533 | None:intergenic | 10.0% |
| !!! | AGAATATATATTTTGGTTAT+TGG | + | chr8_4:15473797-15473816 | Msa1315890:intron | 15.0% |
| !! | TTTAGATAATTAGAAAATGA+TGG | + | chr8_4:15474008-15474027 | Msa1315890:intron | 15.0% |
| !!! | GAACTTAATAGAATATTTTT+AGG | + | chr8_4:15474107-15474126 | Msa1315890:intron | 15.0% |
| !!! | CTGTTTTTCTTTTTTTTTTT+TGG | + | chr8_4:15474629-15474648 | Msa1315890:intron | 15.0% |
| !!! | GTTTTTCTTTTTTTTTTTTG+GGG | + | chr8_4:15474631-15474650 | Msa1315890:intron | 15.0% |
| !!! | AATACTTCTAGTTTTTAAAT+GGG | - | chr8_4:15474830-15474849 | None:intergenic | 15.0% |
| !!! | AAATACTTCTAGTTTTTAAA+TGG | - | chr8_4:15474831-15474850 | None:intergenic | 15.0% |
| !!! | AAATGATGTATTCAATTTTT+TGG | + | chr8_4:15474858-15474877 | Msa1315890:intron | 15.0% |
| !!! | GAGATTAGAAATTTTTTTAA+CGG | - | chr8_4:15475136-15475155 | None:intergenic | 15.0% |
| !! | CAATACTTAAAATATACAAT+GGG | + | chr8_4:15475220-15475239 | Msa1315890:intron | 15.0% |
| !!! | AACTATTTTAAGAGAATTTA+AGG | + | chr8_4:15475687-15475706 | Msa1315890:intron | 15.0% |
| !!! | ACTATTTTAAGAGAATTTAA+GGG | + | chr8_4:15475688-15475707 | Msa1315890:intron | 15.0% |
| !!! | TGTTATTTAAAGATATCTTA+GGG | + | chr8_4:15475748-15475767 | Msa1315890:intron | 15.0% |
| !! | GTTGTTTATAAATATAACAA+TGG | + | chr8_4:15476800-15476819 | Msa1315890:intron | 15.0% |
| !! | AAAAACAAAATCAACAAATA+AGG | - | chr8_4:15477603-15477622 | None:intergenic | 15.0% |
| !! | TGATAATAATACATAAAATG+CGG | - | chr8_4:15478712-15478731 | None:intergenic | 15.0% |
| !!! | TATATAATTTTAACTTGAGA+TGG | + | chr8_4:15479250-15479269 | Msa1315890:three_prime_UTR | 15.0% |
| !! | CCAATCATACATAAAAATTT+AGG | - | chr8_4:15473753-15473772 | None:intergenic | 20.0% |
| !!! | CCTAAATTTTTATGTATGAT+TGG | + | chr8_4:15473750-15473769 | Msa1315890:intron | 20.0% |
| !!! | TGAGTGTAGAATATATATTT+TGG | + | chr8_4:15473790-15473809 | Msa1315890:intron | 20.0% |
| !!! | ATATTTTTAGGTTTCAAAGT+TGG | + | chr8_4:15474119-15474138 | Msa1315890:intron | 20.0% |
| !!! | TGTTAGGATTTTATTATCAA+AGG | + | chr8_4:15474163-15474182 | Msa1315890:intron | 20.0% |
| !!! | GTTAGGATTTTATTATCAAA+GGG | + | chr8_4:15474164-15474183 | Msa1315890:intron | 20.0% |
| !! | ATCCATTCATTTATTTGAAT+AGG | + | chr8_4:15474499-15474518 | Msa1315890:intron | 20.0% |
| !!! | AAAAACTAGAAGTATTTTGT+TGG | + | chr8_4:15474834-15474853 | Msa1315890:intron | 20.0% |
| !! | GCAATACTTAAAATATACAA+TGG | + | chr8_4:15475219-15475238 | Msa1315890:intron | 20.0% |
| !!! | AAAATATACAATGGGTTTTT+TGG | + | chr8_4:15475228-15475247 | Msa1315890:intron | 20.0% |
| !!! | AAATATACAATGGGTTTTTT+GGG | + | chr8_4:15475229-15475248 | Msa1315890:intron | 20.0% |
| !!! | TTTTTTTGCAATCACTTATT+TGG | + | chr8_4:15475365-15475384 | Msa1315890:intron | 20.0% |
| !!! | TTTTTTGCAATCACTTATTT+GGG | + | chr8_4:15475366-15475385 | Msa1315890:intron | 20.0% |
| !! | AGAGTATAAACCTATTAATT+TGG | - | chr8_4:15475408-15475427 | None:intergenic | 20.0% |
| !!! | ATTATTTTCAAGGCTTTTAA+AGG | - | chr8_4:15475499-15475518 | None:intergenic | 20.0% |
| !!! | AACAACATCATTATTTTCAA+TGG | - | chr8_4:15475626-15475645 | None:intergenic | 20.0% |
| !! | GAAAATAATGATGTTGTTAA+CGG | + | chr8_4:15475628-15475647 | Msa1315890:intron | 20.0% |
| !!! | GTGTTATTTAAAGATATCTT+AGG | + | chr8_4:15475747-15475766 | Msa1315890:intron | 20.0% |
| !! | GTTATTTAAAGATATCTTAG+GGG | + | chr8_4:15475749-15475768 | Msa1315890:intron | 20.0% |
| !! | TTATTTCCTTTAAGCTTAAA+GGG | - | chr8_4:15475872-15475891 | None:intergenic | 20.0% |
| !! | AACTCTAGATTATATAAACT+AGG | + | chr8_4:15475890-15475909 | Msa1315890:intron | 20.0% |
| !! | ACTCTAGATTATATAAACTA+GGG | + | chr8_4:15475891-15475910 | Msa1315890:intron | 20.0% |
| !!! | TTAGTCAACAGAATTTATTT+TGG | - | chr8_4:15476031-15476050 | None:intergenic | 20.0% |
| !! | AATTCAGTTCAATATTAAAG+CGG | + | chr8_4:15476094-15476113 | Msa1315890:CDS | 20.0% |
| !! | TATGATTTAAAAAAGGTGAT+GGG | + | chr8_4:15476433-15476452 | Msa1315890:intron | 20.0% |
| !!! | ACAATCTTTAAAATATGAGT+AGG | - | chr8_4:15476642-15476661 | None:intergenic | 20.0% |
| !!! | CTCAATCTTTTTAATTTCTT+TGG | - | chr8_4:15477828-15477847 | None:intergenic | 20.0% |
| !! | ATTAAAAAGATTGAGTCTAA+AGG | + | chr8_4:15477833-15477852 | Msa1315890:CDS | 20.0% |
| !! | ACACGAAAAAAAATTCATTA+AGG | + | chr8_4:15478564-15478583 | Msa1315890:intron | 20.0% |
| !! | GAAAAAAAATTCATTAAGGA+TGG | + | chr8_4:15478568-15478587 | Msa1315890:intron | 20.0% |
| !! | TATTTACCTTAATTGATCAA+TGG | + | chr8_4:15478617-15478636 | Msa1315890:intron | 20.0% |
| !!! | AATATTTAAAACAGCAATAC+TGG | - | chr8_4:15478884-15478903 | None:intergenic | 20.0% |
| !!! | CATTTCTCTTATATTTCTAA+CGG | + | chr8_4:15478919-15478938 | Msa1315890:intron | 20.0% |
| !!! | AGAATTTACATTTTGCTTAT+AGG | + | chr8_4:15479226-15479245 | Msa1315890:three_prime_UTR | 20.0% |
| ! | GAAAAATAAACTATGATGCT+AGG | + | chr8_4:15473869-15473888 | Msa1315890:intron | 25.0% |
| ! | TAATTAGAAAATGATGGTAG+CGG | + | chr8_4:15474014-15474033 | Msa1315890:intron | 25.0% |
| ! | AGTTTCTACGAGAAATTATA+TGG | + | chr8_4:15474059-15474078 | Msa1315890:intron | 25.0% |
| ! | TACGAGAAATTATATGGATT+TGG | + | chr8_4:15474065-15474084 | Msa1315890:intron | 25.0% |
| ! | GGATTTGGCTATTATAAAAT+AGG | + | chr8_4:15474080-15474099 | Msa1315890:intron | 25.0% |
| ! | CACCTATTCAAATAAATGAA+TGG | - | chr8_4:15474504-15474523 | None:intergenic | 25.0% |
| ! | TTTATCACAATTTCGATCAT+TGG | + | chr8_4:15475000-15475019 | Msa1315890:intron | 25.0% |
| !!! | AATTTCGATCATTGGTTTTT+GGG | + | chr8_4:15475008-15475027 | Msa1315890:intron | 25.0% |
| !! | TCACTTATTTGGGATAAAAA+TGG | + | chr8_4:15475376-15475395 | Msa1315890:intron | 25.0% |
| ! | ATGGACAAAACCAAATTAAT+AGG | + | chr8_4:15475395-15475414 | Msa1315890:intron | 25.0% |
| ! | AAAAGCCTTGAAAATAATGA+TGG | + | chr8_4:15475501-15475520 | Msa1315890:intron | 25.0% |
| !!! | ATTTTAAGAGAATTTAAGGG+AGG | + | chr8_4:15475691-15475710 | Msa1315890:intron | 25.0% |
| ! | GTGTCTATTATAAAACTAGA+GGG | + | chr8_4:15475717-15475736 | Msa1315890:intron | 25.0% |
| ! | TGTCTATTATAAAACTAGAG+GGG | + | chr8_4:15475718-15475737 | Msa1315890:intron | 25.0% |
| !! | GTTATTTCCTTTAAGCTTAA+AGG | - | chr8_4:15475873-15475892 | None:intergenic | 25.0% |
| !! | TACTCCTAAAAGTGTAAAAT+AGG | - | chr8_4:15476264-15476283 | None:intergenic | 25.0% |
| ! | TTTAATATCAGAATTGCTTC+AGG | + | chr8_4:15476375-15476394 | Msa1315890:CDS | 25.0% |
| ! | AGGAACCTATGATTTAAAAA+AGG | + | chr8_4:15476426-15476445 | Msa1315890:CDS | 25.0% |
| !!! | CATCACCTTTTTTAAATCAT+AGG | - | chr8_4:15476434-15476453 | None:intergenic | 25.0% |
| ! | CTATGATTTAAAAAAGGTGA+TGG | + | chr8_4:15476432-15476451 | Msa1315890:intron | 25.0% |
| ! | TGTTGAATATGCAAACAAAA+AGG | + | chr8_4:15476546-15476565 | Msa1315890:CDS | 25.0% |
| ! | AAAGTGGAATTCATCTAAAT+AGG | - | chr8_4:15477082-15477101 | None:intergenic | 25.0% |
| ! | AACAAAGTCTAATCAAAAAG+TGG | - | chr8_4:15477098-15477117 | None:intergenic | 25.0% |
| !! | TTTGATTAGACTTTGTTATC+TGG | + | chr8_4:15477101-15477120 | Msa1315890:intron | 25.0% |
| ! | CTAAGCAGTAAGTATTATTA+TGG | + | chr8_4:15477436-15477455 | Msa1315890:intron | 25.0% |
| ! | ATTATAACAAATATCTCCTC+TGG | + | chr8_4:15477520-15477539 | Msa1315890:intron | 25.0% |
| !! | TGCCATTTGTTTCAAATTAT+TGG | + | chr8_4:15477752-15477771 | Msa1315890:intron | 25.0% |
| !! | CACCAATAATTTGAAACAAA+TGG | - | chr8_4:15477757-15477776 | None:intergenic | 25.0% |
| !! | AATTTACATTGACTAGTCAA+TGG | - | chr8_4:15477977-15477996 | None:intergenic | 25.0% |
| !!! | TTTTCATTGCTTTTATTGTG+TGG | + | chr8_4:15478033-15478052 | Msa1315890:intron | 25.0% |
| ! | ACGCAAGTTATATATAATAG+TGG | + | chr8_4:15478060-15478079 | Msa1315890:intron | 25.0% |
| !!! | AATTCACTTTAAGAGAGTTT+TGG | - | chr8_4:15478359-15478378 | None:intergenic | 25.0% |
| ! | TAACTTAATGACTAACAAAG+GGG | - | chr8_4:15478407-15478426 | None:intergenic | 25.0% |
| ! | GTAACTTAATGACTAACAAA+GGG | - | chr8_4:15478408-15478427 | None:intergenic | 25.0% |
| ! | TAGAAGAATACTTAAATCCT+TGG | - | chr8_4:15478656-15478675 | None:intergenic | 25.0% |
| !! | TGTTGTTATCTTGAAGTTTT+TGG | + | chr8_4:15479083-15479102 | Msa1315890:three_prime_UTR | 25.0% |
| ! | TCAACAAACATATAGATTTG+TGG | - | chr8_4:15479203-15479222 | None:intergenic | 25.0% |
| ! | ATTAAACTTAGAGATCTCTA+TGG | - | chr8_4:15479288-15479307 | None:intergenic | 25.0% |
| ! | TTTTCGAAGAGAAGAAGAAA+AGG | - | chr8_4:15473257-15473276 | None:intergenic | 30.0% |
| TCTTTGTTCTTAATCATCGA+AGG | - | chr8_4:15473417-15473436 | None:intergenic | 30.0% | |
| ! | CTTGTATTTTCAATCGTCTT+CGG | - | chr8_4:15473660-15473679 | None:intergenic | 30.0% |
| GAAGACGATTGAAAATACAA+GGG | + | chr8_4:15473659-15473678 | Msa1315890:CDS | 30.0% | |
| TACACTGTGAGATTTGAATT+AGG | + | chr8_4:15473835-15473854 | Msa1315890:intron | 30.0% | |
| !! | AAGGAAACTTAGTTTGTAGT+TGG | + | chr8_4:15474219-15474238 | Msa1315890:intron | 30.0% |
| !!! | TTTAGTCATGCGTTTTGATT+TGG | + | chr8_4:15474271-15474290 | Msa1315890:intron | 30.0% |
| ! | ATATGACAATTTGGGTTCTT+TGG | + | chr8_4:15474352-15474371 | Msa1315890:intron | 30.0% |
| ! | CAACTTGTTTGTTCTATGAA+TGG | + | chr8_4:15474469-15474488 | Msa1315890:intron | 30.0% |
| GTTTGTTCTATGAATGGTAT+TGG | + | chr8_4:15474475-15474494 | Msa1315890:intron | 30.0% | |
| !!! | CAATTTCGATCATTGGTTTT+TGG | + | chr8_4:15475007-15475026 | Msa1315890:intron | 30.0% |
| GACATTTACACAAAGCTTAA+GGG | - | chr8_4:15475050-15475069 | None:intergenic | 30.0% | |
| TGACATTTACACAAAGCTTA+AGG | - | chr8_4:15475051-15475070 | None:intergenic | 30.0% | |
| TTGTCATGTGAGAAAATAGA+GGG | - | chr8_4:15475082-15475101 | None:intergenic | 30.0% | |
| TTTGTCATGTGAGAAAATAG+AGG | - | chr8_4:15475083-15475102 | None:intergenic | 30.0% | |
| AGTATTGCAATATGCTTTCA+TGG | - | chr8_4:15475207-15475226 | None:intergenic | 30.0% | |
| AAATGATCTGAATCAACATG+TGG | - | chr8_4:15475330-15475349 | None:intergenic | 30.0% | |
| AATAGGTTTATACTCTGCAA+CGG | + | chr8_4:15475412-15475431 | Msa1315890:intron | 30.0% | |
| ! | CCATTGTTGTAAACTTTTCA+AGG | - | chr8_4:15475556-15475575 | None:intergenic | 30.0% |
| CCTTGAAAAGTTTACAACAA+TGG | + | chr8_4:15475553-15475572 | Msa1315890:intron | 30.0% | |
| ACAACAATGGCAGTAATATT+CGG | + | chr8_4:15475566-15475585 | Msa1315890:intron | 30.0% | |
| TTAACAGTGTTAAGTCACAA+AGG | + | chr8_4:15475655-15475674 | Msa1315890:intron | 30.0% | |
| TAACAGTGTTAAGTCACAAA+GGG | + | chr8_4:15475656-15475675 | Msa1315890:intron | 30.0% | |
| CGTGTCTATTATAAAACTAG+AGG | + | chr8_4:15475716-15475735 | Msa1315890:intron | 30.0% | |
| GTCTATTATAAAACTAGAGG+GGG | + | chr8_4:15475719-15475738 | Msa1315890:intron | 30.0% | |
| ATTTAAAGATATCTTAGGGG+AGG | + | chr8_4:15475752-15475771 | Msa1315890:intron | 30.0% | |
| GCTATTCAACGAAAAATCAA+GGG | - | chr8_4:15475791-15475810 | None:intergenic | 30.0% | |
| AGCTATTCAACGAAAAATCA+AGG | - | chr8_4:15475792-15475811 | None:intergenic | 30.0% | |
| ACGAAACAAGAGTAATTCTT+GGG | + | chr8_4:15475923-15475942 | Msa1315890:intron | 30.0% | |
| CAAGTGGTGATTAATATCTT+GGG | - | chr8_4:15476129-15476148 | None:intergenic | 30.0% | |
| AAATCAAATCAAGAAGGCAA+GGG | - | chr8_4:15476236-15476255 | None:intergenic | 30.0% | |
| ! | GCATCCTATTTTACACTTTT+AGG | + | chr8_4:15476257-15476276 | Msa1315890:intron | 30.0% |
| AGCAATTCTGATATTAAAGC+AGG | - | chr8_4:15476373-15476392 | None:intergenic | 30.0% | |
| ! | TGTTTTACGCAAGGATATTA+AGG | + | chr8_4:15476767-15476786 | Msa1315890:CDS | 30.0% |
| TTCCACTTAAATTCGTAGAT+AGG | + | chr8_4:15476900-15476919 | Msa1315890:intron | 30.0% | |
| TGGCACTAACAATATAAGAA+AGG | - | chr8_4:15477494-15477513 | None:intergenic | 30.0% | |
| ! | ACAGTGTTTCTATGTAATGA+TGG | + | chr8_4:15477546-15477565 | Msa1315890:intron | 30.0% |
| ! | CAGTGTTTCTATGTAATGAT+GGG | + | chr8_4:15477547-15477566 | Msa1315890:intron | 30.0% |
| AATATACCTAAGAACGTGAT+TGG | - | chr8_4:15477798-15477817 | None:intergenic | 30.0% | |
| ! | CAAATTATTGACTAGTAGTC+TGG | + | chr8_4:15478114-15478133 | Msa1315890:intron | 30.0% |
| ATTGTCTACTCATGTGATTT+AGG | + | chr8_4:15478145-15478164 | Msa1315890:intron | 30.0% | |
| AGTAGTAGTAAAAGGAAGAT+AGG | + | chr8_4:15478196-15478215 | Msa1315890:intron | 30.0% | |
| CGTAACTTAATGACTAACAA+AGG | - | chr8_4:15478409-15478428 | None:intergenic | 30.0% | |
| CTATTTATTAAGTGCATGTG+AGG | - | chr8_4:15478461-15478480 | None:intergenic | 30.0% | |
| CTCACATGCACTTAATAAAT+AGG | + | chr8_4:15478459-15478478 | Msa1315890:intron | 30.0% | |
| ACATGCACTTAATAAATAGG+AGG | + | chr8_4:15478462-15478481 | Msa1315890:intron | 30.0% | |
| AGATTGCCATTGATCAATTA+AGG | - | chr8_4:15478626-15478645 | None:intergenic | 30.0% | |
| AATACTAAGCCAAAACATGA+AGG | - | chr8_4:15478686-15478705 | None:intergenic | 30.0% | |
| TAATTTCCCCTTAAAAATGC+AGG | + | chr8_4:15478753-15478772 | Msa1315890:intron | 30.0% | |
| TTAACTTCAATGTGAAACGA+GGG | - | chr8_4:15478786-15478805 | None:intergenic | 30.0% | |
| ! | TTTAACTTCAATGTGAAACG+AGG | - | chr8_4:15478787-15478806 | None:intergenic | 30.0% |
| TAAAAGTGGAGAATATGAGT+GGG | + | chr8_4:15478834-15478853 | Msa1315890:CDS | 30.0% | |
| TATTCATTCGTGACGAATTT+AGG | + | chr8_4:15479332-15479351 | Msa1315890:three_prime_UTR | 30.0% | |
| AGAGAAGAAGAAAAGGATTG+AGG | - | chr8_4:15473250-15473269 | None:intergenic | 35.0% | |
| TGTTCTTAATCATCGAAGGA+CGG | - | chr8_4:15473413-15473432 | None:intergenic | 35.0% | |
| GTTAAAAGAGCTATTGAGCT+CGG | + | chr8_4:15473519-15473538 | Msa1315890:CDS | 35.0% | |
| CGAAGACGATTGAAAATACA+AGG | + | chr8_4:15473658-15473677 | Msa1315890:CDS | 35.0% | |
| TTCCTTAACTAGTGCTCTAA+GGG | - | chr8_4:15474205-15474224 | None:intergenic | 35.0% | |
| TTTCCTTAACTAGTGCTCTA+AGG | - | chr8_4:15474206-15474225 | None:intergenic | 35.0% | |
| !! | AACTTAGTTTGTAGTTGGCT+CGG | + | chr8_4:15474224-15474243 | Msa1315890:intron | 35.0% |
| AAACGCATGACTAAATTGTG+TGG | - | chr8_4:15474266-15474285 | None:intergenic | 35.0% | |
| ! | AGAAAATTCGAAAGGGGTTT+TGG | + | chr8_4:15474319-15474338 | Msa1315890:intron | 35.0% |
| TCGTATGGCATATGACAATT+TGG | + | chr8_4:15474343-15474362 | Msa1315890:intron | 35.0% | |
| CGTATGGCATATGACAATTT+GGG | + | chr8_4:15474344-15474363 | Msa1315890:intron | 35.0% | |
| ! | TTTTTCTGCTTTGTGTGTGT+TGG | + | chr8_4:15474658-15474677 | Msa1315890:intron | 35.0% |
| CGACAGAAATTCTAAACAAC+AGG | - | chr8_4:15474738-15474757 | None:intergenic | 35.0% | |
| ATTTACACAAAGCTTAAGGG+AGG | - | chr8_4:15475047-15475066 | None:intergenic | 35.0% | |
| TGTCATGTGAGAAAATAGAG+GGG | - | chr8_4:15475081-15475100 | None:intergenic | 35.0% | |
| !!! | GAGTGTGGGTATCATTTTTT+AGG | - | chr8_4:15475177-15475196 | None:intergenic | 35.0% |
| ATTGCAATATGCTTTCATGG+TGG | - | chr8_4:15475204-15475223 | None:intergenic | 35.0% | |
| ATCTGAATCAACATGTGGAT+AGG | - | chr8_4:15475325-15475344 | None:intergenic | 35.0% | |
| ! | TATACTCTGCAACGGTTTTA+TGG | + | chr8_4:15475420-15475439 | Msa1315890:intron | 35.0% |
| !! | ATACTCTGCAACGGTTTTAT+GGG | + | chr8_4:15475421-15475440 | Msa1315890:intron | 35.0% |
| !!! | GTAATATTCGGTGGTTTTAG+TGG | + | chr8_4:15475578-15475597 | Msa1315890:intron | 35.0% |
| !! | AACTTTAGAGTGTAAAGTGC+AGG | - | chr8_4:15475818-15475837 | None:intergenic | 35.0% |
| TCCTTTAAGCTTAAAGGGAT+GGG | - | chr8_4:15475867-15475886 | None:intergenic | 35.0% | |
| TTCCTTTAAGCTTAAAGGGA+TGG | - | chr8_4:15475868-15475887 | None:intergenic | 35.0% | |
| ! | AGAATTACTCTTGTTTCGTG+TGG | - | chr8_4:15475922-15475941 | None:intergenic | 35.0% |
| CACGAAACAAGAGTAATTCT+TGG | + | chr8_4:15475922-15475941 | Msa1315890:intron | 35.0% | |
| ATTTGTTTGCAGCTATTTGC+TGG | + | chr8_4:15476057-15476076 | Msa1315890:intron | 35.0% | |
| GCAAGTGGTGATTAATATCT+TGG | - | chr8_4:15476130-15476149 | None:intergenic | 35.0% | |
| AACATACCGTAGAATTGAAG+CGG | - | chr8_4:15476152-15476171 | None:intergenic | 35.0% | |
| GAATACAAACAACAGACTAG+AGG | - | chr8_4:15476176-15476195 | None:intergenic | 35.0% | |
| CAAATCAAATCAAGAAGGCA+AGG | - | chr8_4:15476237-15476256 | None:intergenic | 35.0% | |
| ! | CTTGCCTTCTTGATTTGATT+TGG | + | chr8_4:15476235-15476254 | Msa1315890:intron | 35.0% |
| GATGCCAAATCAAATCAAGA+AGG | - | chr8_4:15476242-15476261 | None:intergenic | 35.0% | |
| GTCAAAAATCAACAGACAGA+TGG | - | chr8_4:15476333-15476352 | None:intergenic | 35.0% | |
| !!! | ATTTTTGACTTCATCTGCAG+AGG | + | chr8_4:15476344-15476363 | Msa1315890:intron | 35.0% |
| !!! | TTTTTGACTTCATCTGCAGA+GGG | + | chr8_4:15476345-15476364 | Msa1315890:intron | 35.0% |
| CTCTTGAAGTAATGTGCATT+TGG | - | chr8_4:15476406-15476425 | None:intergenic | 35.0% | |
| AATGCACATTACTTCAAGAG+AGG | + | chr8_4:15476406-15476425 | Msa1315890:CDS | 35.0% | |
| TGAGTAGGATCTTTACTCAA+AGG | - | chr8_4:15476627-15476646 | None:intergenic | 35.0% | |
| !! | CAAGAGAGCATCTGAAAAAT+AGG | - | chr8_4:15476697-15476716 | None:intergenic | 35.0% |
| TCAGATGCTCTCTTGATTAT+TGG | + | chr8_4:15476702-15476721 | Msa1315890:intron | 35.0% | |
| !! | TTGATTATTGGCTTACCTGA+AGG | + | chr8_4:15476714-15476733 | Msa1315890:CDS | 35.0% |
| !!! | CACAAATCTTGTTTTACGCA+AGG | + | chr8_4:15476758-15476777 | Msa1315890:CDS | 35.0% |
| CTCCTATCTACGAATTTAAG+TGG | - | chr8_4:15476905-15476924 | None:intergenic | 35.0% | |
| AAATAGGTAAGACAAAGTGC+AGG | - | chr8_4:15477066-15477085 | None:intergenic | 35.0% | |
| AGAGAGACTTCATATTCTTC+CGG | + | chr8_4:15477696-15477715 | Msa1315890:CDS | 35.0% | |
| GTCTAAAGGTAAAAATGACG+AGG | + | chr8_4:15477847-15477866 | Msa1315890:CDS | 35.0% | |
| AAAGGTAAAAATGACGAGGA+TGG | + | chr8_4:15477851-15477870 | Msa1315890:CDS | 35.0% | |
| CCATTGAGTTTGAAAATGGA+AGG | - | chr8_4:15477954-15477973 | None:intergenic | 35.0% | |
| ! | CCTTCCATTTTCAAACTCAA+TGG | + | chr8_4:15477951-15477970 | Msa1315890:intron | 35.0% |
| ATGGCCATTGAGTTTGAAAA+TGG | - | chr8_4:15477958-15477977 | None:intergenic | 35.0% | |
| GCGTTGAAAGTAGTAGTAAA+AGG | + | chr8_4:15478188-15478207 | Msa1315890:intron | 35.0% | |
| !!! | TTTTGGAATTTCAGAGTTGC+AGG | - | chr8_4:15478342-15478361 | None:intergenic | 35.0% |
| ATGGCAATCTAATGTTACCA+AGG | + | chr8_4:15478636-15478655 | Msa1315890:intron | 35.0% | |
| ! | TACCTGATTCCTTCATGTTT+TGG | + | chr8_4:15478674-15478693 | Msa1315890:intron | 35.0% |
| TTAAGGGGAAATTATTGCTG+AGG | - | chr8_4:15478747-15478766 | None:intergenic | 35.0% | |
| GGAACATTTGACACTAAAAG+TGG | + | chr8_4:15478820-15478839 | Msa1315890:CDS | 35.0% | |
| CTAAAAGTGGAGAATATGAG+TGG | + | chr8_4:15478833-15478852 | Msa1315890:CDS | 35.0% | |
| AAATGCAAAGTTCCAAGACA+AGG | - | chr8_4:15479024-15479043 | None:intergenic | 35.0% | |
| ! | TGTCTTGGAACTTTGCATTT+TGG | + | chr8_4:15479024-15479043 | Msa1315890:three_prime_UTR | 35.0% |
| ATCAGTGTTGTGTACAAAGA+TGG | - | chr8_4:15479170-15479189 | None:intergenic | 35.0% | |
| GTTATTCCTACAATGGCGAT+CGG | + | chr8_4:15473291-15473310 | Msa1315890:exon | 40.0% | |
| AAGCGCAACAATGATTCAGA+CGG | + | chr8_4:15473324-15473343 | Msa1315890:CDS | 40.0% | |
| GCGAAGATAATTCTTCCAAG+AGG | + | chr8_4:15473346-15473365 | Msa1315890:CDS | 40.0% | |
| TTCCAAGAGGAAAACCAGAA+CGG | + | chr8_4:15473359-15473378 | Msa1315890:CDS | 40.0% | |
| AACCAGAACGGAAACAGAAA+CGG | + | chr8_4:15473371-15473390 | Msa1315890:CDS | 40.0% | |
| TTAATCATCGAAGGACGGAA+CGG | - | chr8_4:15473408-15473427 | None:intergenic | 40.0% | |
| CTTCTTCTGATGCTTAAGCT+TGG | - | chr8_4:15473460-15473479 | None:intergenic | 40.0% | |
| AACTCAACCTCTTCATCATC+AGG | - | chr8_4:15473708-15473727 | None:intergenic | 40.0% | |
| ! | ATCAGCTTCAAGTTTGTCAG+TGG | - | chr8_4:15473980-15473999 | None:intergenic | 40.0% |
| CAACAGTTAGAGCAACTGTT+AGG | + | chr8_4:15474147-15474166 | Msa1315890:intron | 40.0% | |
| AGCCGAGAAGAAAATTCGAA+AGG | + | chr8_4:15474311-15474330 | Msa1315890:intron | 40.0% | |
| GCCGAGAAGAAAATTCGAAA+GGG | + | chr8_4:15474312-15474331 | Msa1315890:intron | 40.0% | |
| ! | CCCCTTTCGAATTTTCTTCT+CGG | - | chr8_4:15474316-15474335 | None:intergenic | 40.0% |
| CCGAGAAGAAAATTCGAAAG+GGG | + | chr8_4:15474313-15474332 | Msa1315890:intron | 40.0% | |
| ! | GATAGTTGATGCTAACGAGA+TGG | + | chr8_4:15474411-15474430 | Msa1315890:intron | 40.0% |
| ! | CATCATGTTTTCTTGCCTTC+TGG | + | chr8_4:15474579-15474598 | Msa1315890:intron | 40.0% |
| CTTTGTGTGTGTTGGATTGT+TGG | + | chr8_4:15474666-15474685 | Msa1315890:intron | 40.0% | |
| AGAAACACACCAGTAAGGAA+TGG | - | chr8_4:15475268-15475287 | None:intergenic | 40.0% | |
| TCACTAGAAACACACCAGTA+AGG | - | chr8_4:15475273-15475292 | None:intergenic | 40.0% | |
| AATCAACATGTGGATAGGAG+CGG | - | chr8_4:15475320-15475339 | None:intergenic | 40.0% | |
| !! | TACTCTGCAACGGTTTTATG+GGG | + | chr8_4:15475422-15475441 | Msa1315890:intron | 40.0% |
| ! | CGCTGCCATCATTATTTTCA+AGG | - | chr8_4:15475509-15475528 | None:intergenic | 40.0% |
| ACAATGGCAGTAATATTCGG+TGG | + | chr8_4:15475569-15475588 | Msa1315890:intron | 40.0% | |
| !!! | ATATTCGGTGGTTTTAGTGG+AGG | + | chr8_4:15475581-15475600 | Msa1315890:intron | 40.0% |
| !! | GTAGGAGAACTTTAGAGTGT+AGG | - | chr8_4:15475825-15475844 | None:intergenic | 40.0% |
| ACCCATCCCTTTAAGCTTAA+AGG | + | chr8_4:15475863-15475882 | Msa1315890:intron | 40.0% | |
| TTTAGGAGTAAGAGTCGAGT+TGG | + | chr8_4:15476274-15476293 | Msa1315890:intron | 40.0% | |
| !!! | TTTTGACTTCATCTGCAGAG+GGG | + | chr8_4:15476346-15476365 | Msa1315890:intron | 40.0% |
| !!! | CTGACTGCTTTTTATCCACA+CGG | - | chr8_4:15476478-15476497 | None:intergenic | 40.0% |
| TAGTTGTACACACCAATCGT+AGG | + | chr8_4:15476584-15476603 | Msa1315890:CDS | 40.0% | |
| AGTTGTACACACCAATCGTA+GGG | + | chr8_4:15476585-15476604 | Msa1315890:CDS | 40.0% | |
| GCATCTGAAAAATAGGAGCA+AGG | - | chr8_4:15476690-15476709 | None:intergenic | 40.0% | |
| ! | GTGAGTTTGAAATGAGCAGT+AGG | - | chr8_4:15476741-15476760 | None:intergenic | 40.0% |
| TCTGATCTCCTCATTGATGT+CGG | + | chr8_4:15476835-15476854 | Msa1315890:intron | 40.0% | |
| AATGTACACCGACATCAATG+AGG | - | chr8_4:15476846-15476865 | None:intergenic | 40.0% | |
| AAGTTGTTCAACACAAGCTC+AGG | - | chr8_4:15477249-15477268 | None:intergenic | 40.0% | |
| AAATGTGATATGCCCATGCT+AGG | + | chr8_4:15477379-15477398 | Msa1315890:intron | 40.0% | |
| ATTTCAGTCAGACCTAGCAT+GGG | - | chr8_4:15477394-15477413 | None:intergenic | 40.0% | |
| TATTTCAGTCAGACCTAGCA+TGG | - | chr8_4:15477395-15477414 | None:intergenic | 40.0% | |
| CTGCTTAGAAAACAACTGAC+AGG | - | chr8_4:15477424-15477443 | None:intergenic | 40.0% | |
| ATAGAAACACTGTGAACCAG+AGG | - | chr8_4:15477539-15477558 | None:intergenic | 40.0% | |
| ATATGAAGTCTCTCTGGTTG+TGG | - | chr8_4:15477691-15477710 | None:intergenic | 40.0% | |
| GGAAGAATATGAAGTCTCTC+TGG | - | chr8_4:15477697-15477716 | None:intergenic | 40.0% | |
| TCATATTCTTCCGGCATCAT+CGG | + | chr8_4:15477705-15477724 | Msa1315890:CDS | 40.0% | |
| ! | AAGAATTGTACCGATGATGC+CGG | - | chr8_4:15477718-15477737 | None:intergenic | 40.0% |
| ATGTGTCCAATCACGTTCTT+AGG | + | chr8_4:15477789-15477808 | Msa1315890:intron | 40.0% | |
| !! | GAAGACGGGCAATTGTTTTA+TGG | - | chr8_4:15477898-15477917 | None:intergenic | 40.0% |
| TAAAACAATTGCCCGTCTTC+AGG | + | chr8_4:15477898-15477917 | Msa1315890:CDS | 40.0% | |
| AATTGACACCAACCTGAAGA+CGG | - | chr8_4:15477913-15477932 | None:intergenic | 40.0% | |
| GAAAGAGGTTTGCAATGCAT+TGG | - | chr8_4:15478254-15478273 | None:intergenic | 40.0% | |
| GAGCTATAATGGCAAGAAAG+AGG | - | chr8_4:15478269-15478288 | None:intergenic | 40.0% | |
| TTCTTGCCATTATAGCTCAG+TGG | + | chr8_4:15478271-15478290 | Msa1315890:intron | 40.0% | |
| AGTCTACCACTGAGCTATAA+TGG | - | chr8_4:15478280-15478299 | None:intergenic | 40.0% | |
| ATTATAGCTCAGTGGTAGAC+TGG | + | chr8_4:15478279-15478298 | Msa1315890:intron | 40.0% | |
| CTTAATGACTAACAAAGGGG+AGG | - | chr8_4:15478404-15478423 | None:intergenic | 40.0% | |
| TTAAGTGCATGTGAGGATTG+AGG | - | chr8_4:15478454-15478473 | None:intergenic | 40.0% | |
| AGCCAAAACATGAAGGAATC+AGG | - | chr8_4:15478679-15478698 | None:intergenic | 40.0% | |
| !! | CGCATTCCTGCATTTTTAAG+GGG | - | chr8_4:15478762-15478781 | None:intergenic | 40.0% |
| ! | CCGCATTCCTGCATTTTTAA+GGG | - | chr8_4:15478763-15478782 | None:intergenic | 40.0% |
| CCCTTAAAAATGCAGGAATG+CGG | + | chr8_4:15478760-15478779 | Msa1315890:intron | 40.0% | |
| AAGTTAAAAAGCCTGCAGCA+TGG | + | chr8_4:15478799-15478818 | Msa1315890:CDS | 40.0% | |
| ! | AGAATATGAGTGGGTTCACA+AGG | + | chr8_4:15478843-15478862 | Msa1315890:CDS | 40.0% |
| ! | TGCCTTCTTTTCCTTTTAGC+CGG | + | chr8_4:15478963-15478982 | Msa1315890:intron | 40.0% |
| TTCCGGCTAAAAGGAAAAGA+AGG | - | chr8_4:15478968-15478987 | None:intergenic | 40.0% | |
| ! | CTTTTCCTTTTAGCCGGAAA+TGG | + | chr8_4:15478969-15478988 | Msa1315890:intron | 40.0% |
| ! | TTTTTCCTGTGACCTTGTCT+TGG | + | chr8_4:15479009-15479028 | Msa1315890:exon | 40.0% |
| ! | ATTTTGGACTGCATTTCAGC+TGG | + | chr8_4:15479040-15479059 | Msa1315890:three_prime_UTR | 40.0% |
| GTGTTGTGTACAAAGATGGT+AGG | - | chr8_4:15479166-15479185 | None:intergenic | 40.0% | |
| TCATTCGTGACGAATTTAGG+TGG | + | chr8_4:15479335-15479354 | Msa1315890:three_prime_UTR | 40.0% | |
| TTCATAGGCTAGATGATGCA+AGG | - | chr8_4:15479397-15479416 | None:intergenic | 40.0% | |
| CGTGGTGGTTATTCCTACAA+TGG | + | chr8_4:15473284-15473303 | Msa1315890:exon | 45.0% | |
| !!! | TTCCGTTCTGGTTTTCCTCT+TGG | - | chr8_4:15473364-15473383 | None:intergenic | 45.0% |
| TTCCGTTTCTGTTTCCGTTC+TGG | - | chr8_4:15473376-15473395 | None:intergenic | 45.0% | |
| GGAAACAGAAACGGAAACGA+AGG | + | chr8_4:15473380-15473399 | Msa1315890:CDS | 45.0% | |
| TAATCATCGAAGGACGGAAC+GGG | - | chr8_4:15473407-15473426 | None:intergenic | 45.0% | |
| CGAAAAACGCGCTAAGTCTA+AGG | + | chr8_4:15473482-15473501 | Msa1315890:CDS | 45.0% | |
| ! | TTGTGTGTTGTTGTAGCCTC+CGG | + | chr8_4:15473623-15473642 | Msa1315890:intron | 45.0% |
| ! | TTGCAAGCCTGATGATGAAG+AGG | + | chr8_4:15473698-15473717 | Msa1315890:CDS | 45.0% |
| ! | TGCCCTTAGAGCACTAGTTA+AGG | + | chr8_4:15474200-15474219 | Msa1315890:intron | 45.0% |
| !!! | TAGTTGGCTCGGTTTTGCAT+TGG | + | chr8_4:15474235-15474254 | Msa1315890:intron | 45.0% |
| GCTATGATGACTCGTGCAAA+CGG | - | chr8_4:15474536-15474555 | None:intergenic | 45.0% | |
| TGTGTGTTGGATTGTTGGTG+TGG | + | chr8_4:15474671-15474690 | Msa1315890:intron | 45.0% | |
| GTGTGTTGGATTGTTGGTGT+GGG | + | chr8_4:15474672-15474691 | Msa1315890:intron | 45.0% | |
| TGTGTTGGATTGTTGGTGTG+GGG | + | chr8_4:15474673-15474692 | Msa1315890:intron | 45.0% | |
| !! | TTGCTTAAAGAGTGCCCGTA+GGG | + | chr8_4:15474910-15474929 | Msa1315890:intron | 45.0% |
| TCATGCTAACATGTGCCCTA+CGG | - | chr8_4:15474928-15474947 | None:intergenic | 45.0% | |
| ACTAGACTGCTCTAACAGCT+GGG | - | chr8_4:15475112-15475131 | None:intergenic | 45.0% | |
| AACTAGACTGCTCTAACAGC+TGG | - | chr8_4:15475113-15475132 | None:intergenic | 45.0% | |
| ! | TTCATGGTGGAAGAGAGTGT+GGG | - | chr8_4:15475191-15475210 | None:intergenic | 45.0% |
| ! | TTTCATGGTGGAAGAGAGTG+TGG | - | chr8_4:15475192-15475211 | None:intergenic | 45.0% |
| CGTGTGTTTCCATTCCTTAC+TGG | + | chr8_4:15475256-15475275 | Msa1315890:intron | 45.0% | |
| TGATGGCAGCGCTAGATATT+TGG | + | chr8_4:15475518-15475537 | Msa1315890:intron | 45.0% | |
| GATGGCAGCGCTAGATATTT+GGG | + | chr8_4:15475519-15475538 | Msa1315890:intron | 45.0% | |
| ATGGCAGCGCTAGATATTTG+GGG | + | chr8_4:15475520-15475539 | Msa1315890:intron | 45.0% | |
| CAGTGTTAAGTCACAAAGGG+AGG | + | chr8_4:15475659-15475678 | Msa1315890:intron | 45.0% | |
| AAGCTTAAAGGGATGGGTGT+AGG | - | chr8_4:15475861-15475880 | None:intergenic | 45.0% | |
| ! | CACTTGCCGCTTCAATTCTA+CGG | + | chr8_4:15476143-15476162 | Msa1315890:CDS | 45.0% |
| TCACTATCTCTTTCACCGTG+TGG | + | chr8_4:15476460-15476479 | Msa1315890:intron | 45.0% | |
| AAATGAGCAGTAGGTCCTTC+AGG | - | chr8_4:15476732-15476751 | None:intergenic | 45.0% | |
| AACAACTTCACAACACGCCT+AGG | + | chr8_4:15477261-15477280 | Msa1315890:CDS | 45.0% | |
| ACAACTTCACAACACGCCTA+GGG | + | chr8_4:15477262-15477281 | Msa1315890:CDS | 45.0% | |
| CTTTAAACTCGGGATCTTGG+GGG | - | chr8_4:15477649-15477668 | None:intergenic | 45.0% | |
| CCTTTAAACTCGGGATCTTG+GGG | - | chr8_4:15477650-15477669 | None:intergenic | 45.0% | |
| CCCTTTAAACTCGGGATCTT+GGG | - | chr8_4:15477651-15477670 | None:intergenic | 45.0% | |
| CCCAAGATCCCGAGTTTAAA+GGG | + | chr8_4:15477648-15477667 | Msa1315890:CDS | 45.0% | |
| TACACGTCGCCCTTTAAACT+CGG | - | chr8_4:15477660-15477679 | None:intergenic | 45.0% | |
| !! | CGGGCAATTGTTTTATGGTC+AGG | - | chr8_4:15477893-15477912 | None:intergenic | 45.0% |
| ATTGACACCAACCTGAAGAC+GGG | - | chr8_4:15477912-15477931 | None:intergenic | 45.0% | |
| TTGCAGGTACTCAAAACCTG+AGG | - | chr8_4:15478326-15478345 | None:intergenic | 45.0% | |
| TCTTCTGCGGCAGTATTGTT+AGG | - | chr8_4:15478491-15478510 | None:intergenic | 45.0% | |
| GACCAATCCTTCCAACATGA+CGG | - | chr8_4:15478523-15478542 | None:intergenic | 45.0% | |
| ! | GCCGCATTCCTGCATTTTTA+AGG | - | chr8_4:15478764-15478783 | None:intergenic | 45.0% |
| TGTCAAATGTTCCATGCTGC+AGG | - | chr8_4:15478813-15478832 | None:intergenic | 45.0% | |
| TGTGTCCATTTCCGGCTAAA+AGG | - | chr8_4:15478977-15478996 | None:intergenic | 45.0% | |
| ! | CTTCGACTTGTGTCCATTTC+CGG | - | chr8_4:15478985-15479004 | None:intergenic | 45.0% |
| AAATGGACACAAGTCGAAGG+AGG | + | chr8_4:15478986-15479005 | Msa1315890:CDS | 45.0% | |
| AAGTTCCAAGACAAGGTCAC+AGG | - | chr8_4:15479017-15479036 | None:intergenic | 45.0% | |
| ACTGCATTTCAGCTGGAACT+TGG | + | chr8_4:15479047-15479066 | Msa1315890:three_prime_UTR | 45.0% | |
| CAGCTGGAACTTGGTTAATC+TGG | + | chr8_4:15479056-15479075 | Msa1315890:three_prime_UTR | 45.0% | |
| !! | ATAAATAATAATTAGTTAAA+GGG | - | chr8_4:15474951-15474970 | None:intergenic | 5.0% |
| !! | AATAAATAATAATTAGTTAA+AGG | - | chr8_4:15474952-15474971 | None:intergenic | 5.0% |
| !!! | TTTTGTATTTTAATTTATTA+TGG | + | chr8_4:15479131-15479150 | Msa1315890:three_prime_UTR | 5.0% |
| TAGGAATAACCACCACGCGA+GGG | - | chr8_4:15473281-15473300 | None:intergenic | 50.0% | |
| ATTCCTACAATGGCGATCGG+TGG | + | chr8_4:15473294-15473313 | Msa1315890:exon | 50.0% | |
| TTTCCACCGATCGCCATTGT+AGG | - | chr8_4:15473300-15473319 | None:intergenic | 50.0% | |
| !!! | GAAAGGGGTTTTGGCTCGTA+TGG | + | chr8_4:15474328-15474347 | Msa1315890:intron | 50.0% |
| GATGCTAACGAGATGGTCGA+TGG | + | chr8_4:15474418-15474437 | Msa1315890:intron | 50.0% | |
| GGTCGATGGAGATGTAGTCT+TGG | + | chr8_4:15474432-15474451 | Msa1315890:intron | 50.0% | |
| ATAGCTGTTGTGTGAGCTGC+AGG | + | chr8_4:15474551-15474570 | Msa1315890:intron | 50.0% | |
| TTGTTGGTGTGGGGATCTGT+TGG | + | chr8_4:15474682-15474701 | Msa1315890:intron | 50.0% | |
| TGGGGATCTGTTGGATACAG+CGG | + | chr8_4:15474691-15474710 | Msa1315890:intron | 50.0% | |
| ! | CTGATTTGTGCGCGCATGTA+CGG | + | chr8_4:15474776-15474795 | Msa1315890:intron | 50.0% |
| !! | CTTGCTTAAAGAGTGCCCGT+AGG | + | chr8_4:15474909-15474928 | Msa1315890:intron | 50.0% |
| CATGCTAACATGTGCCCTAC+GGG | - | chr8_4:15474927-15474946 | None:intergenic | 50.0% | |
| CTAGACTGCTCTAACAGCTG+GGG | - | chr8_4:15475111-15475130 | None:intergenic | 50.0% | |
| CGTAGAATTGAAGCGGCAAG+TGG | - | chr8_4:15476145-15476164 | None:intergenic | 50.0% | |
| !! | AGGAGTAAGAGTCGAGTTGG+AGG | + | chr8_4:15476277-15476296 | Msa1315890:intron | 50.0% |
| CCTACTTGGTTCCCTACGAT+TGG | - | chr8_4:15476599-15476618 | None:intergenic | 50.0% | |
| CCAATCGTAGGGAACCAAGT+AGG | + | chr8_4:15476596-15476615 | Msa1315890:intron | 50.0% | |
| ATCGTAGGGAACCAAGTAGG+TGG | + | chr8_4:15476599-15476618 | Msa1315890:intron | 50.0% | |
| !! | ACTCAAAGGCACCACCTACT+TGG | - | chr8_4:15476613-15476632 | None:intergenic | 50.0% |
| TGTGTCCCCTTGCAGAATCA+TGG | + | chr8_4:15477204-15477223 | Msa1315890:intron | 50.0% | |
| GGACTCCATGATTCTGCAAG+GGG | - | chr8_4:15477212-15477231 | None:intergenic | 50.0% | |
| GGGACTCCATGATTCTGCAA+GGG | - | chr8_4:15477213-15477232 | None:intergenic | 50.0% | |
| TGGGACTCCATGATTCTGCA+AGG | - | chr8_4:15477214-15477233 | None:intergenic | 50.0% | |
| TGTTCAACACAAGCTCAGGC+TGG | - | chr8_4:15477245-15477264 | None:intergenic | 50.0% | |
| CCCCAAGATCCCGAGTTTAA+AGG | + | chr8_4:15477647-15477666 | Msa1315890:CDS | 50.0% | |
| GCCCTTTAAACTCGGGATCT+TGG | - | chr8_4:15477652-15477671 | None:intergenic | 50.0% | |
| ACACGTCGCCCTTTAAACTC+GGG | - | chr8_4:15477659-15477678 | None:intergenic | 50.0% | |
| GAAGTCTCTCTGGTTGTGGA+AGG | - | chr8_4:15477687-15477706 | None:intergenic | 50.0% | |
| ACAATTGCCCGTCTTCAGGT+TGG | + | chr8_4:15477902-15477921 | Msa1315890:intron | 50.0% | |
| CAGTGGTAGACTGGTAGTCT+TGG | + | chr8_4:15478288-15478307 | Msa1315890:intron | 50.0% | |
| ! | TGGTAGACTGGTAGTCTTGG+TGG | + | chr8_4:15478291-15478310 | Msa1315890:intron | 50.0% |
| ! | TTGGTGGATGCAGTATCCTC+AGG | + | chr8_4:15478307-15478326 | Msa1315890:intron | 50.0% |
| ATGACTAACAAAGGGGAGGC+TGG | - | chr8_4:15478400-15478419 | None:intergenic | 50.0% | |
| TGCATGTGAGGATTGAGGAG+GGG | - | chr8_4:15478449-15478468 | None:intergenic | 50.0% | |
| GTGCATGTGAGGATTGAGGA+GGG | - | chr8_4:15478450-15478469 | None:intergenic | 50.0% | |
| AGTGCATGTGAGGATTGAGG+AGG | - | chr8_4:15478451-15478470 | None:intergenic | 50.0% | |
| ATCCTTCCAACATGACGGCA+AGG | - | chr8_4:15478518-15478537 | None:intergenic | 50.0% | |
| TGCCGTCATGTTGGAAGGAT+TGG | + | chr8_4:15478518-15478537 | Msa1315890:intron | 50.0% | |
| CGGAAATGGACACAAGTCGA+AGG | + | chr8_4:15478983-15479002 | Msa1315890:CDS | 50.0% | |
| CTCTTCGAAAAACCCTCGCG+TGG | + | chr8_4:15473266-15473285 | Msa1315890:five_prime_UTR | 55.0% | |
| TTCGAAAAACCCTCGCGTGG+TGG | + | chr8_4:15473269-15473288 | Msa1315890:five_prime_UTR | 55.0% | |
| GTAGGAATAACCACCACGCG+AGG | - | chr8_4:15473282-15473301 | None:intergenic | 55.0% | |
| CAATGGCGATCGGTGGAAAG+AGG | + | chr8_4:15473301-15473320 | Msa1315890:exon | 55.0% | |
| AGCTATTGAGCTCGGCGAAG+AGG | + | chr8_4:15473527-15473546 | Msa1315890:CDS | 55.0% | |
| GTTGTAGCCTCCGGAGAAGA+AGG | + | chr8_4:15473632-15473651 | Msa1315890:intron | 55.0% | |
| GTCTTCGGCACCTTCTTCTC+CGG | - | chr8_4:15473645-15473664 | None:intergenic | 55.0% | |
| !! | TGATGCTAGGTGTCGCTCAG+AGG | + | chr8_4:15473882-15473901 | Msa1315890:intron | 55.0% |
| CTGTTGTGTGAGCTGCAGGT+CGG | + | chr8_4:15474555-15474574 | Msa1315890:intron | 55.0% | |
| ACCTTCCAACTCGATGCCCT+AGG | - | chr8_4:15477281-15477300 | None:intergenic | 55.0% | |
| ACAAAGGGGAGGCTGGAAGA+TGG | - | chr8_4:15478393-15478412 | None:intergenic | 55.0% | |
| TGCCTTGCCGTCATGTTGGA+AGG | + | chr8_4:15478513-15478532 | Msa1315890:intron | 55.0% | |
| TTCGGCACCTTCTTCTCCGG+AGG | - | chr8_4:15473642-15473661 | None:intergenic | 60.0% | |
| !! | CTAGGTGTCGCTCAGAGGCA+CGG | + | chr8_4:15473887-15473906 | Msa1315890:intron | 60.0% |
| !! | TAGGTGTCGCTCAGAGGCAC+GGG | + | chr8_4:15473888-15473907 | Msa1315890:intron | 60.0% |
| CTTGCCTTCTGGTCTGCCTC+TGG | + | chr8_4:15474590-15474609 | Msa1315890:intron | 60.0% | |
| TGCACCAGAGGCAGACCAGA+AGG | - | chr8_4:15474597-15474616 | None:intergenic | 60.0% | |
| CAGCAGTACCACTGCACCAG+AGG | - | chr8_4:15474609-15474628 | None:intergenic | 60.0% | |
| GACTGCTCTAACAGCTGGGG+AGG | - | chr8_4:15475108-15475127 | None:intergenic | 60.0% | |
| !! | ACACGCCTAGGGCATCGAGT+TGG | + | chr8_4:15477273-15477292 | Msa1315890:CDS | 60.0% |
| !! | GCCTAGGGCATCGAGTTGGA+AGG | + | chr8_4:15477277-15477296 | Msa1315890:CDS | 60.0% |
| ACGGCAAGGCAGCTCTTCTG+CGG | - | chr8_4:15478504-15478523 | None:intergenic | 60.0% | |
| GAGCTGCCTTGCCGTCATGT+TGG | + | chr8_4:15478509-15478528 | Msa1315890:intron | 60.0% | |
| CTGGTCTGCCTCTGGTGCAG+TGG | + | chr8_4:15474598-15474617 | Msa1315890:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 15473236 | 15479418 | 15473236 | ID=Msa1315890;Name=Msa1315890 |
| chr8_4 | mRNA | 15473236 | 15479418 | 15473236 | ID=Msa1315890-mRNA-1;Parent=Msa1315890;Name=Msa1315890-mRNA-1;_AED=0.12;_eAED=0.12;_QI=67|1|1|1|0.9|0.90|11|398|358 |
| chr8_4 | exon | 15473236 | 15473548 | 15473236 | ID=Msa1315890-mRNA-1:exon:5947;Parent=Msa1315890-mRNA-1 |
| chr8_4 | exon | 15473639 | 15473719 | 15473639 | ID=Msa1315890-mRNA-1:exon:5948;Parent=Msa1315890-mRNA-1 |
| chr8_4 | exon | 15476069 | 15476164 | 15476069 | ID=Msa1315890-mRNA-1:exon:5949;Parent=Msa1315890-mRNA-1 |
| chr8_4 | exon | 15476364 | 15476447 | 15476364 | ID=Msa1315890-mRNA-1:exon:5950;Parent=Msa1315890-mRNA-1 |
| chr8_4 | exon | 15476544 | 15476613 | 15476544 | ID=Msa1315890-mRNA-1:exon:5951;Parent=Msa1315890-mRNA-1 |
| chr8_4 | exon | 15476706 | 15476788 | 15476706 | ID=Msa1315890-mRNA-1:exon:5952;Parent=Msa1315890-mRNA-1 |
| chr8_4 | exon | 15477219 | 15477298 | 15477219 | ID=Msa1315890-mRNA-1:exon:5953;Parent=Msa1315890-mRNA-1 |
| chr8_4 | exon | 15477628 | 15477726 | 15477628 | ID=Msa1315890-mRNA-1:exon:5954;Parent=Msa1315890-mRNA-1 |
| chr8_4 | exon | 15477811 | 15477919 | 15477811 | ID=Msa1315890-mRNA-1:exon:5955;Parent=Msa1315890-mRNA-1 |
| chr8_4 | exon | 15478775 | 15478864 | 15478775 | ID=Msa1315890-mRNA-1:exon:5956;Parent=Msa1315890-mRNA-1 |
| chr8_4 | exon | 15478982 | 15479418 | 15478982 | ID=Msa1315890-mRNA-1:exon:5957;Parent=Msa1315890-mRNA-1 |
| chr8_4 | five_prime_UTR | 15473236 | 15473302 | 15473236 | ID=Msa1315890-mRNA-1:five_prime_utr;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15473303 | 15473548 | 15473303 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15473639 | 15473719 | 15473639 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15476069 | 15476164 | 15476069 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15476364 | 15476447 | 15476364 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15476544 | 15476613 | 15476544 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15476706 | 15476788 | 15476706 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15477219 | 15477298 | 15477219 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15477628 | 15477726 | 15477628 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15477811 | 15477919 | 15477811 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15478775 | 15478864 | 15478775 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | CDS | 15478982 | 15479020 | 15478982 | ID=Msa1315890-mRNA-1:cds;Parent=Msa1315890-mRNA-1 |
| chr8_4 | three_prime_UTR | 15479021 | 15479418 | 15479021 | ID=Msa1315890-mRNA-1:three_prime_utr;Parent=Msa1315890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
