AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0532710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532710 MtrunA17_Chr4g0036001 97.712 874 19 1 1 873 1 874 0.0 1763
Msa0532710 MtrunA17_Chr5g0405181 60.579 553 152 9 1 493 1 547 0.0 632
Msa0532710 MtrunA17_Chr5g0405181 44.781 297 139 6 575 865 669 946 9.45e-66 238
Msa0532710 MtrunA17_Chr8g0372171 71.034 435 117 3 1 431 1 430 0.0 625
Msa0532710 MtrunA17_Chr8g0372171 37.288 236 112 8 548 765 813 1030 5.10e-28 121
Msa0532710 MtrunA17_Chr3g0142261 62.708 421 145 4 19 438 14 423 1.84e-166 523
Msa0532710 MtrunA17_Chr3g0142261 38.113 265 135 9 623 872 1270 1520 7.84e-43 169
Msa0532710 MtrunA17_Chr6g0483701 57.820 422 165 5 17 435 23 434 4.20e-148 461
Msa0532710 MtrunA17_Chr6g0483701 40.773 233 129 4 632 855 711 943 2.72e-45 176
Msa0532710 MtrunA17_Chr4g0070001 53.922 408 166 4 22 429 141 526 2.18e-130 416
Msa0532710 MtrunA17_Chr4g0070001 35.985 264 156 7 610 865 770 1028 7.93e-42 166
Msa0532710 MtrunA17_Chr1g0152231 38.964 444 244 9 23 454 2 430 8.08e-80 275
Msa0532710 MtrunA17_Chr1g0193221 43.169 366 185 6 23 376 2 356 1.20e-78 278
Msa0532710 MtrunA17_Chr7g0258991 39.243 423 228 10 21 425 70 481 2.98e-75 265
Msa0532710 MtrunA17_Chr3g0145071 37.931 435 245 8 3 425 80 501 7.39e-75 265
Msa0532710 MtrunA17_Chr4g0035661 37.590 415 236 7 23 425 88 491 4.41e-73 260
Msa0532710 MtrunA17_Chr1g0178411 33.850 452 258 8 11 431 5 446 5.13e-56 209
Msa0532710 MtrunA17_Chr2g0327581 33.333 414 243 6 10 399 40 444 5.64e-55 206
Msa0532710 MtrunA17_Chr7g0266631 32.944 428 252 6 25 421 10 433 2.61e-53 201
Msa0532710 MtrunA17_Chr3g0122121 36.815 383 195 12 25 373 99 468 2.83e-51 195
Msa0532710 MtrunA17_Chr1g0182151 30.973 452 279 9 22 445 52 498 6.74e-51 194
Msa0532710 MtrunA17_Chr2g0322291 33.810 420 230 9 3 382 60 471 4.77e-50 192
Msa0532710 MtrunA17_Chr3g0132921 30.886 463 247 11 70 492 47 476 8.18e-50 184
Msa0532710 MtrunA17_Chr8g0369881 32.979 376 227 8 2 365 853 1215 4.30e-49 189
Msa0532710 MtrunA17_Chr8g0377731 34.250 400 215 10 25 392 56 439 1.17e-48 187
Msa0532710 MtrunA17_Chr5g0427481 35.965 342 174 8 70 376 55 386 2.55e-47 183
Msa0532710 MtrunA17_Chr4g0053211 34.351 393 201 14 70 411 50 436 2.69e-47 182
Msa0532710 MtrunA17_Chr1g0195111 35.106 376 217 10 16 376 388 751 4.70e-47 182
Msa0532710 MtrunA17_Chr4g0045381 35.751 386 192 8 25 372 194 561 4.86e-47 183
Msa0532710 MtrunA17_Chr4g0062291 34.758 351 202 8 18 350 117 458 4.66e-46 176
Msa0532710 MtrunA17_Chr5g0407791 32.461 382 234 9 7 375 872 1242 8.63e-46 178
Msa0532710 MtrunA17_Chr2g0307481 35.088 342 202 8 22 350 66 400 1.02e-44 171
Msa0532710 MtrunA17_Chr4g0069141 36.053 380 200 12 25 376 154 518 1.06e-44 176
Msa0532710 MtrunA17_Chr1g0192481 33.747 403 229 14 12 389 49 438 1.66e-44 170
Msa0532710 MtrunA17_Chr5g0398521 34.043 376 215 8 24 372 57 426 6.63e-43 168
Msa0532710 MtrunA17_Chr1g0153061 33.422 377 207 10 70 404 46 420 7.42e-43 169
Msa0532710 MtrunA17_Chr3g0134191 33.247 385 212 10 70 411 46 428 2.90e-42 167
Msa0532710 MtrunA17_Chr2g0319271 33.690 374 192 11 4 340 380 734 2.29e-41 162
Msa0532710 MtrunA17_Chr3g0102921 31.738 397 217 12 16 377 430 807 2.41e-41 164
Msa0532710 MtrunA17_Chr2g0312631 30.819 464 278 17 25 463 385 830 3.07e-41 164
Msa0532710 MtrunA17_Chr7g0271961 31.818 374 227 10 16 376 393 751 6.27e-41 162
Msa0532710 MtrunA17_Chr7g0245931 32.000 375 229 6 24 375 52 423 6.74e-41 162
Msa0532710 MtrunA17_Chr5g0411971 32.084 427 262 13 7 416 381 796 1.24e-40 162
Msa0532710 MtrunA17_Chr5g0447041 30.824 425 213 13 16 377 426 832 4.64e-40 160
Msa0532710 MtrunA17_Chr2g0280421 33.240 358 211 9 1 341 415 761 7.33e-40 158
Msa0532710 MtrunA17_Chr4g0042061 33.242 364 206 9 4 340 413 766 1.46e-39 157
Msa0532710 MtrunA17_Chr2g0331761 33.735 332 205 7 24 347 185 509 1.76e-39 156
Msa0532710 MtrunA17_Chr5g0421521 30.580 448 275 14 7 429 356 792 3.16e-39 157
Msa0532710 MtrunA17_Chr5g0421591 30.804 448 274 14 7 429 356 792 7.22e-39 155
Msa0532710 MtrunA17_Chr4g0049011 31.319 364 214 8 3 340 259 612 1.30e-38 153
Msa0532710 MtrunA17_Chr6g0485471 33.529 340 213 7 13 347 108 439 3.23e-38 152
Msa0532710 MtrunA17_Chr1g0191851 33.687 377 214 12 25 378 148 511 2.52e-37 150
Msa0532710 MtrunA17_Chr7g0238581 29.798 396 231 11 24 384 25 408 7.44e-37 147
Msa0532710 MtrunA17_Chr7g0272871 31.894 417 246 13 25 417 128 530 9.03e-37 148
Msa0532710 MtrunA17_Chr2g0295881 33.138 341 208 8 24 347 197 534 8.19e-36 146
Msa0532710 MtrunA17_Chr7g0257301 31.707 410 210 13 16 373 384 775 1.06e-35 146
Msa0532710 MtrunA17_Chr4g0067421 32.733 333 204 8 24 340 205 533 3.96e-33 137
Msa0532710 MtrunA17_Chr3g0101021 28.272 382 224 9 25 374 76 439 1.10e-31 133
Msa0532710 MtrunA17_Chr5g0445211 28.818 347 215 8 71 386 109 454 1.76e-29 126
Msa0532710 MtrunA17_Chr1g0191181 27.889 398 225 9 71 448 128 483 2.80e-27 118
Msa0532710 MtrunA17_Chr7g0269681 38.122 181 104 4 196 376 49 221 7.94e-25 109
Msa0532710 MtrunA17_Chr8g0372181 51.648 91 43 1 779 868 1 91 2.85e-23 95.1
Msa0532710 MtrunA17_Chr8g0386891 40.690 145 80 3 196 340 12 150 5.38e-21 96.7
Msa0532710 MtrunA17_Chr8g0367581 29.909 331 202 13 25 344 147 458 7.27e-19 92.4
Msa0532710 MtrunA17_Chr6g0484501 33.333 207 112 5 196 400 42 224 2.92e-17 82.4
Msa0532710 MtrunA17_Chr6g0470541 23.585 318 214 11 21 326 2 302 1.69e-16 84.3
Msa0532710 MtrunA17_Chr8g0390991 38.621 145 83 3 196 340 12 150 2.79e-16 83.2
Msa0532710 MtrunA17_Chr7g0269691 35.758 165 91 5 16 169 392 552 3.23e-14 76.6
Msa0532710 MtrunA17_Chr8g0390981 33.143 175 98 6 9 169 499 668 3.81e-14 76.6
Msa0532710 MtrunA17_Chr6g0484511 33.548 155 85 5 25 166 290 439 6.33e-14 75.5
Msa0532710 MtrunA17_Chr8g0386901 32.500 160 95 4 16 164 475 632 1.80e-13 74.3
Msa0532710 MtrunA17_Chr3g0142841 25.191 262 176 6 73 322 145 398 9.19e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532710 AT2G21300.2 58.188 916 284 19 1 872 1 861 0.0 983
Msa0532710 AT2G21300.4 58.188 916 284 19 1 872 1 861 0.0 983
Msa0532710 AT2G21300.3 58.188 916 284 19 1 872 1 861 0.0 983
Msa0532710 AT2G21300.1 58.188 916 284 19 1 872 1 861 0.0 983
Msa0532710 AT2G21300.5 58.188 916 284 19 1 872 1 861 0.0 983
Msa0532710 AT4G38950.3 58.079 885 277 19 22 872 11 835 0.0 933
Msa0532710 AT4G38950.5 58.079 885 277 19 22 872 11 835 0.0 933
Msa0532710 AT4G38950.4 58.079 885 277 19 22 872 11 835 0.0 933
Msa0532710 AT4G38950.1 58.079 885 277 19 22 872 11 835 0.0 933
Msa0532710 AT4G38950.2 58.079 885 277 19 22 872 11 835 0.0 933
Msa0532710 AT3G51150.2 64.018 453 152 4 13 458 6 454 0.0 592
Msa0532710 AT3G51150.2 51.471 204 95 3 672 872 849 1051 1.78e-57 214
Msa0532710 AT3G51150.1 64.018 453 152 4 13 458 6 454 0.0 592
Msa0532710 AT3G51150.1 51.471 204 95 3 672 872 847 1049 1.80e-57 214
Msa0532710 AT3G51150.4 64.018 453 152 4 13 458 6 454 0.0 592
Msa0532710 AT3G51150.4 51.471 204 95 3 672 872 849 1051 1.78e-57 214
Msa0532710 AT3G51150.3 64.018 453 152 4 13 458 6 454 0.0 592
Msa0532710 AT3G51150.3 51.471 204 95 3 672 872 849 1051 1.78e-57 214
Msa0532710 AT5G66310.2 67.136 426 136 2 13 434 7 432 0.0 582
Msa0532710 AT5G66310.2 43.200 250 124 5 632 872 820 1060 1.35e-51 196
Msa0532710 AT5G66310.3 67.136 426 136 2 13 434 7 432 0.0 582
Msa0532710 AT5G66310.3 43.200 250 124 5 632 872 820 1060 1.35e-51 196
Msa0532710 AT5G66310.1 67.136 426 136 2 13 434 7 432 0.0 582
Msa0532710 AT5G66310.1 43.200 250 124 5 632 872 820 1060 1.35e-51 196
Msa0532710 AT4G24170.1 67.703 418 120 7 20 428 2 413 1.64e-180 547
Msa0532710 AT4G24170.1 38.362 232 113 6 643 870 791 996 4.45e-36 147
Msa0532710 AT4G24170.2 67.703 418 120 7 20 428 2 413 1.64e-180 547
Msa0532710 AT4G24170.2 38.362 232 113 6 643 870 791 996 4.45e-36 147
Msa0532710 AT1G18370.1 58.034 417 157 5 22 433 29 432 3.68e-146 457
Msa0532710 AT1G18370.1 36.948 249 134 5 632 864 721 962 3.38e-44 173
Msa0532710 AT3G43210.3 56.699 418 170 5 9 419 9 422 3.33e-143 448
Msa0532710 AT3G43210.3 34.483 319 180 12 567 863 614 925 2.42e-41 164
Msa0532710 AT3G43210.5 56.699 418 170 5 9 419 9 422 3.33e-143 448
Msa0532710 AT3G43210.5 34.483 319 180 12 567 863 614 925 2.42e-41 164
Msa0532710 AT3G43210.2 56.699 418 170 5 9 419 9 422 3.33e-143 448
Msa0532710 AT3G43210.2 34.483 319 180 12 567 863 614 925 2.42e-41 164
Msa0532710 AT3G43210.4 56.699 418 170 5 9 419 9 422 3.33e-143 448
Msa0532710 AT3G43210.4 34.483 319 180 12 567 863 614 925 2.42e-41 164
Msa0532710 AT3G43210.1 56.699 418 170 5 9 419 9 422 3.33e-143 448
Msa0532710 AT3G43210.1 34.483 319 180 12 567 863 614 925 2.42e-41 164
Msa0532710 AT5G42490.2 69.517 269 81 1 20 288 5 272 2.75e-115 377
Msa0532710 AT5G42490.2 46.328 177 86 3 696 870 906 1075 2.00e-43 171
Msa0532710 AT5G42490.1 69.517 269 81 1 20 288 5 272 2.99e-115 377
Msa0532710 AT5G42490.1 46.328 177 86 3 696 870 910 1079 1.78e-43 171
Msa0532710 AT3G51150.5 64.014 289 95 3 175 458 17 301 3.31e-111 362
Msa0532710 AT3G51150.5 51.471 204 95 3 672 872 696 898 8.55e-58 214
Msa0532710 AT3G10180.2 42.667 375 193 5 23 385 2 366 2.37e-84 295
Msa0532710 AT3G10180.1 42.667 375 193 5 23 385 2 366 2.96e-84 295
Msa0532710 AT3G12020.4 43.802 363 189 5 21 377 66 419 2.47e-78 274
Msa0532710 AT3G12020.1 43.802 363 189 5 21 377 66 419 2.47e-78 274
Msa0532710 AT3G12020.3 40.662 423 223 9 21 425 66 478 8.41e-78 273
Msa0532710 AT3G12020.2 40.662 423 223 9 21 425 66 478 8.41e-78 273
Msa0532710 AT5G06670.8 41.322 363 198 5 21 377 63 416 2.34e-76 264
Msa0532710 AT5G06670.4 41.322 363 198 5 21 377 63 416 2.34e-76 264
Msa0532710 AT5G06670.7 41.322 363 198 5 21 377 63 416 2.34e-76 264
Msa0532710 AT5G06670.5 41.322 363 198 5 21 377 63 416 4.49e-76 263
Msa0532710 AT1G21730.1 42.133 375 200 7 21 388 72 436 1.06e-74 263
Msa0532710 AT5G06670.2 41.322 363 198 5 21 377 63 416 1.45e-74 263
Msa0532710 AT5G06670.3 41.322 363 198 5 21 377 63 416 1.45e-74 263
Msa0532710 AT1G59540.1 42.350 366 189 7 23 377 2 356 7.45e-74 259
Msa0532710 AT4G39050.1 37.292 421 239 7 18 425 92 500 3.11e-72 258
Msa0532710 AT5G06670.6 40.323 372 198 6 21 377 63 425 7.91e-72 256
Msa0532710 AT5G06670.1 40.323 372 198 6 21 377 63 425 7.91e-72 256
Msa0532710 AT2G21380.2 37.198 414 235 8 25 425 105 506 3.83e-71 254
Msa0532710 AT2G21380.1 37.198 414 235 8 25 425 105 506 3.83e-71 254
Msa0532710 AT2G28620.1 34.222 450 257 9 9 430 40 478 9.10e-59 218
Msa0532710 AT2G28620.3 34.222 450 257 9 9 430 40 478 1.01e-58 218
Msa0532710 AT2G28620.2 34.222 450 257 9 9 430 40 478 1.01e-58 218
Msa0532710 AT1G59540.2 44.828 261 134 3 122 377 9 264 1.33e-57 211
Msa0532710 AT2G36200.1 33.184 446 252 10 10 421 3 436 1.30e-54 205
Msa0532710 AT2G36200.2 33.563 435 243 10 10 410 3 425 1.04e-53 203
Msa0532710 AT4G14150.1 35.013 397 206 8 25 386 92 471 1.34e-53 203
Msa0532710 AT3G45850.2 32.870 432 260 6 25 430 56 483 1.41e-53 202
Msa0532710 AT3G45850.1 32.870 432 260 6 25 430 56 483 1.41e-53 202
Msa0532710 AT3G23670.2 34.152 407 213 9 17 387 91 478 4.83e-52 197
Msa0532710 AT3G23670.1 34.152 407 213 9 17 387 91 478 1.19e-51 197
Msa0532710 AT3G49650.1 35.027 374 214 10 25 376 15 381 1.31e-50 192
Msa0532710 AT2G37420.1 31.887 461 256 12 22 442 46 488 2.98e-50 192
Msa0532710 AT2G37420.2 31.887 461 256 12 22 442 46 488 2.98e-50 192
Msa0532710 AT3G17360.2 36.842 399 198 12 25 390 169 546 9.75e-50 192
Msa0532710 AT3G17360.3 36.842 399 198 12 25 390 169 546 1.01e-49 191
Msa0532710 AT3G17360.1 37.143 385 189 11 25 376 169 533 1.03e-49 191
Msa0532710 AT3G44050.1 35.696 381 203 8 25 374 94 463 5.92e-48 186
Msa0532710 AT3G63480.2 34.930 355 202 7 25 360 4 348 1.68e-46 173
Msa0532710 AT3G19050.1 36.667 360 181 6 25 353 194 537 5.02e-46 180
Msa0532710 AT1G18550.1 34.903 361 197 9 9 346 136 481 9.41e-46 176
Msa0532710 AT5G60930.3 31.633 392 213 9 71 414 45 429 3.55e-45 177
Msa0532710 AT5G65930.3 32.884 371 224 8 7 365 877 1234 3.60e-45 177
Msa0532710 AT5G65930.2 32.884 371 224 8 7 365 871 1228 3.70e-45 177
Msa0532710 AT5G65930.1 32.884 371 224 8 7 365 870 1227 3.73e-45 177
Msa0532710 AT5G60930.2 31.633 392 213 9 71 414 45 429 3.91e-45 177
Msa0532710 AT3G63480.1 34.540 359 202 9 25 360 4 352 4.26e-45 169
Msa0532710 AT5G60930.1 31.633 392 213 9 71 414 45 429 4.76e-45 176
Msa0532710 AT5G27000.1 34.133 375 222 10 16 376 386 749 3.62e-44 173
Msa0532710 AT2G47500.1 35.550 391 218 12 16 382 391 771 4.06e-44 173
Msa0532710 AT2G47500.2 35.550 391 218 12 16 382 391 771 5.05e-44 172
Msa0532710 AT1G09170.4 33.416 404 227 12 16 393 426 813 5.12e-44 172
Msa0532710 AT1G09170.2 33.002 403 230 11 16 393 426 813 6.42e-44 172
Msa0532710 AT1G09170.5 33.002 403 230 11 16 393 426 813 6.68e-44 172
Msa0532710 AT3G50240.2 30.679 427 234 13 25 404 26 437 2.74e-43 170
Msa0532710 AT3G50240.1 31.075 428 231 13 25 404 26 437 3.02e-43 170
Msa0532710 AT3G50240.4 31.075 428 231 13 25 404 26 437 3.55e-43 170
Msa0532710 AT5G47820.2 32.767 412 221 13 25 389 12 414 5.60e-43 169
Msa0532710 AT5G47820.1 32.767 412 221 13 25 389 12 414 5.60e-43 169
Msa0532710 AT1G12430.1 33.333 372 222 7 24 372 70 438 1.11e-42 168
Msa0532710 AT1G12430.2 33.333 372 222 7 24 372 70 438 1.16e-42 168
Msa0532710 AT1G09170.3 33.693 371 220 10 16 372 426 784 1.19e-42 167
Msa0532710 AT1G09170.7 33.693 371 220 10 16 372 426 784 1.19e-42 167
Msa0532710 AT3G16060.1 34.694 343 205 8 13 347 162 493 1.08e-41 163
Msa0532710 AT3G44730.2 33.815 346 193 10 16 340 414 744 1.61e-41 165
Msa0532710 AT3G44730.3 33.815 346 193 10 16 340 414 744 1.61e-41 165
Msa0532710 AT3G44730.1 33.815 346 193 10 16 340 369 699 1.74e-41 165
Msa0532710 AT3G44730.4 33.815 346 193 10 16 340 369 699 1.74e-41 165
Msa0532710 AT1G01950.1 30.093 432 247 10 16 421 55 457 2.36e-41 164
Msa0532710 AT1G01950.2 30.093 432 247 10 16 421 55 457 2.66e-41 164
Msa0532710 AT1G01950.3 30.093 432 247 10 16 421 55 457 2.78e-41 164
Msa0532710 AT5G54670.3 33.056 360 211 7 4 341 317 668 3.18e-41 162
Msa0532710 AT5G54670.1 33.056 360 211 7 4 341 377 728 4.95e-41 162
Msa0532710 AT5G54670.2 33.056 360 211 7 4 341 377 728 4.95e-41 162
Msa0532710 AT4G27180.1 33.425 362 207 9 4 341 368 719 7.19e-41 161
Msa0532710 AT4G27180.2 33.425 362 207 9 4 341 368 719 7.19e-41 161
Msa0532710 AT2G22610.2 31.415 417 238 13 7 407 400 784 1.13e-40 162
Msa0532710 AT5G27550.2 33.178 428 231 13 25 440 133 517 1.13e-40 161
Msa0532710 AT5G27550.1 33.178 428 231 13 25 440 133 517 1.13e-40 161
Msa0532710 AT3G54870.3 31.362 389 213 10 56 423 135 490 1.22e-40 162
Msa0532710 AT3G54870.1 31.362 389 213 10 56 423 135 490 1.23e-40 162
Msa0532710 AT3G54870.2 31.362 389 213 10 56 423 135 490 1.60e-40 162
Msa0532710 AT5G41310.1 31.971 416 227 14 16 418 414 786 1.89e-40 161
Msa0532710 AT1G73860.1 30.846 402 235 12 25 409 510 885 1.13e-39 159
Msa0532710 AT4G05190.2 33.333 345 193 8 25 341 416 751 1.27e-39 158
Msa0532710 AT4G05190.1 32.597 362 207 8 8 341 412 764 1.27e-39 158
Msa0532710 AT1G73860.2 30.846 402 235 12 25 409 427 802 2.75e-39 157
Msa0532710 AT4G21270.1 32.464 345 196 8 25 341 432 767 3.73e-38 153
Msa0532710 AT1G63640.5 30.693 404 236 12 16 402 454 830 8.22e-38 153
Msa0532710 AT1G63640.1 30.693 404 236 12 16 402 464 840 9.49e-38 153
Msa0532710 AT1G63640.4 30.693 404 236 12 16 402 464 840 9.49e-38 153
Msa0532710 AT1G63640.3 30.693 404 236 12 16 402 464 840 9.67e-38 153
Msa0532710 AT1G63640.2 31.017 403 229 13 16 402 464 833 1.05e-37 153
Msa0532710 AT2G22610.1 26.275 647 411 21 7 601 400 1032 1.43e-37 152
Msa0532710 AT3G10310.2 34.746 354 177 12 16 340 355 683 1.59e-37 152
Msa0532710 AT2G22610.3 26.275 647 411 21 7 601 401 1033 1.64e-37 152
Msa0532710 AT3G10310.1 34.746 354 177 12 16 340 355 683 1.74e-37 152
Msa0532710 AT1G09170.6 33.754 317 188 8 16 319 426 733 1.99e-37 150
Msa0532710 AT1G09170.8 33.754 317 188 8 16 319 426 733 1.99e-37 150
Msa0532710 AT1G18410.3 32.727 330 200 8 25 340 490 811 3.17e-37 151
Msa0532710 AT1G18410.2 32.727 330 200 8 25 340 490 811 3.17e-37 151
Msa0532710 AT1G18410.4 32.727 330 200 8 25 340 633 954 5.46e-37 151
Msa0532710 AT1G72250.4 29.913 458 280 16 4 436 492 933 9.75e-37 150
Msa0532710 AT1G72250.3 29.913 458 280 16 4 436 493 934 1.01e-36 150
Msa0532710 AT1G72250.2 29.913 458 280 16 4 436 481 922 1.10e-36 150
Msa0532710 AT1G72250.1 29.913 458 280 16 4 436 472 913 1.40e-36 149
Msa0532710 AT1G18410.5 32.722 327 196 8 25 340 480 793 6.83e-36 147
Msa0532710 AT3G50240.3 33.138 341 173 9 111 404 3 335 9.06e-36 146
Msa0532710 AT1G18410.1 32.722 327 196 8 25 340 633 946 1.06e-35 147
Msa0532710 AT1G55550.1 32.888 374 205 12 25 375 92 442 3.39e-35 144
Msa0532710 AT1G09170.1 30.256 390 222 11 16 393 426 777 1.52e-34 143
Msa0532710 AT3G16630.2 31.287 342 210 7 24 347 193 527 4.65e-34 140
Msa0532710 AT3G16630.1 31.287 342 210 7 24 347 193 527 4.65e-34 140
Msa0532710 AT5G02370.1 28.986 345 211 11 25 353 21 347 1.05e-32 134
Msa0532710 AT3G20150.2 27.507 349 217 6 71 386 136 481 5.17e-31 132
Msa0532710 AT3G20150.1 27.507 349 217 6 71 386 136 481 6.57e-31 131
Msa0532710 AT1G01950.4 29.730 333 204 6 107 413 1 329 7.76e-29 124
Msa0532710 AT5G27950.1 31.310 313 184 8 71 367 119 416 1.44e-28 122
Msa0532710 AT5G65460.2 29.305 331 204 10 25 344 139 450 5.17e-21 99.8
Msa0532710 AT5G65460.6 29.305 331 204 10 25 344 139 450 5.29e-21 99.8
Msa0532710 AT5G65460.4 29.305 331 204 10 25 344 139 450 5.67e-21 99.8
Msa0532710 AT5G65460.1 29.305 331 204 10 25 344 139 450 6.23e-21 99.8
Msa0532710 AT5G65460.3 28.402 338 205 9 25 344 139 457 1.79e-20 98.2
Msa0532710 AT5G27950.2 30.078 256 155 6 122 367 9 250 7.18e-19 91.3
Msa0532710 AT5G10470.1 28.399 331 207 9 25 344 143 454 2.50e-18 91.3
Msa0532710 AT5G10470.2 28.399 331 207 9 25 344 143 454 2.80e-18 90.9
Msa0532710 AT5G23910.2 25.912 274 176 9 60 323 45 301 1.40e-15 81.6
Msa0532710 AT5G23910.1 25.912 274 176 9 60 323 41 297 1.48e-15 81.6
Msa0532710 AT4G14330.1 27.027 296 175 9 71 344 89 365 6.87e-15 79.7
Msa0532710 AT1G20060.7 29.091 275 157 9 73 323 165 425 3.29e-12 71.2
Msa0532710 AT1G20060.10 29.091 275 157 9 73 323 165 425 3.41e-12 70.9
Msa0532710 AT1G20060.3 29.091 275 157 9 73 323 165 425 3.44e-12 70.9
Msa0532710 AT1G20060.8 29.091 275 157 9 73 323 165 425 3.48e-12 70.9
Msa0532710 AT1G20060.4 29.091 275 157 9 73 323 165 425 3.66e-12 70.9
Msa0532710 AT1G20060.9 29.091 275 157 9 73 323 165 425 3.71e-12 70.9
Msa0532710 AT1G20060.5 29.091 275 157 9 73 323 165 425 3.80e-12 70.9
Msa0532710 AT1G20060.2 29.091 275 157 9 73 323 165 425 3.93e-12 70.9
Msa0532710 AT1G20060.6 29.091 275 157 9 73 323 165 425 4.00e-12 70.9

Find 221 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAACCATCTAAATTTAA+TGG 0.137277 4_1:-7234269 None:intergenic
CTGGAAGACCAGATGGTTTA+TGG 0.148054 4_1:+7234234 Msa0532710:CDS
AAGTTCTGCCAGGGAATTTC+TGG 0.153690 4_1:+7232605 Msa0532710:CDS
CCATTCAATGGGTTTGAAAA+AGG 0.199093 4_1:+7234206 Msa0532710:CDS
TGCAGCTAGCAGACCGTTTA+TGG 0.204765 4_1:+7235453 Msa0532710:CDS
CTCACATTGCGTGTTGAATT+TGG 0.223910 4_1:+7229661 None:intergenic
TTTGGCAGGAAGAAGATTTA+TGG 0.227161 4_1:+7233641 Msa0532710:intron
TTCCTTCTTGCTGCAAATTA+AGG 0.234058 4_1:+7235946 Msa0532710:three_prime_UTR
TCAGATGGATAAGGAAATTA+AGG 0.238308 4_1:+7233421 Msa0532710:intron
CACATACCAATCTGATAATT+TGG 0.239249 4_1:-7232499 None:intergenic
GGTGGCAGACAGAGTATTTC+GGG 0.253890 4_1:+7231472 Msa0532710:intron
AAGCTCTACCTCCATGTAAA+TGG 0.274251 4_1:-7235114 None:intergenic
AAGTAGGTCCTGTGGGTTAA+TGG 0.288853 4_1:-7235059 None:intergenic
GTCAGTGTCCTGTTGGTGTC+TGG 0.292300 4_1:-7229985 None:intergenic
AACGATTCTCAGTCTTCTAT+TGG 0.293108 4_1:+7234305 Msa0532710:CDS
ACAGTATCTGGAGGGGAAAA+TGG 0.295774 4_1:+7234011 Msa0532710:CDS
GATTTGGCTTTGACAGTATC+TGG 0.301840 4_1:+7233999 Msa0532710:CDS
CTTAAGTGACAACGGGGATT+TGG 0.305652 4_1:+7233983 Msa0532710:CDS
TTCAATCCATTAAATTTAGA+TGG 0.309591 4_1:+7234263 Msa0532710:CDS
TACATTAACCTGTGCTTTAG+TGG 0.313427 4_1:-7233164 None:intergenic
CATAAACCATCTGGTCTTCC+AGG 0.318695 4_1:-7234233 None:intergenic
TCAAATGTGTAGACATTTCC+TGG 0.325306 4_1:-7234040 None:intergenic
TAAGTAAACTCCGGTTTATA+TGG 0.325660 4_1:-7232848 None:intergenic
CTCTCCATTTCTCCTGTCTC+AGG 0.330013 4_1:-7234179 None:intergenic
GAAGGATCAGATATCTAAAA+AGG 0.331016 4_1:+7233505 Msa0532710:CDS
ATCTCAAGCTGTTGCCTCTA+AGG 0.331700 4_1:-7234346 None:intergenic
ATACAAACTACTCACTTTAG+AGG 0.353065 4_1:+7235775 Msa0532710:three_prime_UTR
TGGTGGCAGACAGAGTATTT+CGG 0.358079 4_1:+7231471 Msa0532710:intron
TTTAATTATTCAGATGGATA+AGG 0.359650 4_1:+7233412 Msa0532710:intron
TCATCCCAGCAACAAAAGTA+TGG 0.377323 4_1:-7234397 None:intergenic
TTTCCAAGTGCCTACACATT+TGG 0.377835 4_1:+7230959 Msa0532710:CDS
TGCTAATGAATCTGCAGATT+GGG 0.381276 4_1:+7230880 Msa0532710:CDS
TGCTAATATACGTCTTCATT+AGG 0.391068 4_1:+7235679 Msa0532710:three_prime_UTR
TTGGCAGGAAGAAGATTTAT+GGG 0.394933 4_1:+7233642 Msa0532710:intron
ATTATTCTTCTTTATGATCT+CGG 0.398338 4_1:+7229811 Msa0532710:five_prime_UTR
GACCAGTCTAAAGGAGTTCC+TGG 0.404750 4_1:-7234978 None:intergenic
CAAATCCCCGTTGTCACTTA+AGG 0.405474 4_1:-7233982 None:intergenic
ATCCGTCCTTAAGTGACAAC+GGG 0.408908 4_1:+7233976 Msa0532710:CDS
ATTGTATCGTATCGCCATTA+TGG 0.409503 4_1:+7235880 Msa0532710:three_prime_UTR
AGAGGAGACTCTACAGGATT+GGG 0.412152 4_1:+7232126 Msa0532710:CDS
TCTGGCTGTCTTTCTCAGAC+TGG 0.414517 4_1:-7235178 None:intergenic
AACCTTCACGCAATGTATTC+CGG 0.415906 4_1:-7230931 None:intergenic
GCATCTCAGGTATCATCAGC+TGG 0.417129 4_1:+7232804 Msa0532710:CDS
CGAGCCCTCAAGGAGATGTT+TGG 0.417430 4_1:+7235551 Msa0532710:CDS
CTGCTAATGAATCTGCAGAT+TGG 0.419350 4_1:+7230879 Msa0532710:CDS
AGGGAGCGAGCGTGCATCTC+AGG 0.420236 4_1:+7232791 Msa0532710:CDS
AGAAGATTCTTGTGTTACTT+AGG 0.420887 4_1:+7230828 Msa0532710:CDS
GTTCCTGGTGCCTCCTGCAT+TGG 0.421307 4_1:-7234963 None:intergenic
CAATGGAGAGACACTTGTTT+CGG 0.422658 4_1:-7235807 None:intergenic
CCGTCAGTGGATGACCTTAG+AGG 0.426876 4_1:+7234332 Msa0532710:CDS
GGCAACAGCTTGAGATCATC+TGG 0.430160 4_1:+7234353 Msa0532710:CDS
AACTTACTACACTAGCAGAT+AGG 0.431683 4_1:-7232647 None:intergenic
AATTCCTTTACCTTCACAAA+AGG 0.433816 4_1:-7232170 None:intergenic
AACTTTCTCCATAAACCATC+TGG 0.438525 4_1:-7234242 None:intergenic
AACTAGAAGCCGGAGTTGTT+CGG 0.440145 4_1:+7234136 Msa0532710:CDS
CTCTGTAAGTTTCTCTAGAA+CGG 0.444093 4_1:-7232107 None:intergenic
TTCCCTGGCAGAACTTTCAA+TGG 0.446524 4_1:-7232598 None:intergenic
AGACAGTCAAATTCGCCATC+TGG 0.447417 4_1:-7235913 None:intergenic
CTATTTAACGAATGGGGCAT+TGG 0.449067 4_1:+7235407 Msa0532710:CDS
AACTCTCTAATGCGTATGTT+GGG 0.451837 4_1:-7233706 None:intergenic
TATGAAAAGCAGCTTGTTGA+TGG 0.452686 4_1:+7234440 Msa0532710:CDS
CTGGAGAAGAGTTGTCGAAA+TGG 0.453784 4_1:+7230774 Msa0532710:CDS
TCATTAGGAGTGTGTACAGC+AGG 0.453816 4_1:+7235694 Msa0532710:three_prime_UTR
ATGGAGAGGACGCCATTCAA+TGG 0.453935 4_1:+7234194 Msa0532710:CDS
TATCAGTGTTGCACCATAAA+CGG 0.454876 4_1:-7235466 None:intergenic
TCTGTAAGTTTCTCTAGAAC+GGG 0.458045 4_1:-7232106 None:intergenic
TTCCCCTGAGACAGGAGAAA+TGG 0.463457 4_1:+7234175 Msa0532710:CDS
GAAAAGGCTATTTAACGAAT+GGG 0.464097 4_1:+7235400 Msa0532710:CDS
CAGAGGAGACTCTACAGGAT+TGG 0.465719 4_1:+7232125 Msa0532710:CDS
GAAATTTCCTTCTCATTCAA+AGG 0.470020 4_1:-7230857 None:intergenic
TTCTTGTGTTACTTAGGCTT+AGG 0.470717 4_1:+7230834 Msa0532710:CDS
TGGGATTAGCTTGTTAATTG+AGG 0.472715 4_1:+7230708 Msa0532710:five_prime_UTR
CTTCTTTGCAGTATTCATCA+AGG 0.474289 4_1:-7233902 None:intergenic
ACGATGTCCCAGACACCAAC+AGG 0.475916 4_1:+7229977 Msa0532710:five_prime_UTR
CTGTCTCCACTATTATATTG+AGG 0.476344 4_1:-7233736 None:intergenic
AAGAAGGTTGCCATATAAAC+CGG 0.478479 4_1:+7232838 Msa0532710:CDS
CAATCTCTACATGCCATGTC+AGG 0.480188 4_1:+7234083 Msa0532710:CDS
TCTCCATTTCTCCTGTCTCA+GGG 0.480908 4_1:-7234178 None:intergenic
AGGTATATGAGGAAGGAGCT+AGG 0.481647 4_1:+7231513 Msa0532710:CDS
CGCATACTGCAGCCTTGCTT+AGG 0.486895 4_1:+7233037 Msa0532710:CDS
ATCTCACCAAATTATCAGAT+TGG 0.487669 4_1:+7232493 Msa0532710:CDS
AACGTGATCTTGCTGAATCA+AGG 0.488340 4_1:+7233456 Msa0532710:CDS
TCCTTTGCCCAGAAATTCCC+TGG 0.488533 4_1:-7232613 None:intergenic
TCAGAGTCCTCAAGCATTTG+TGG 0.489326 4_1:+7233682 Msa0532710:CDS
TTGAAGTTAACGTGATTGTC+TGG 0.489517 4_1:-7235196 None:intergenic
AACCTTAATTTGCAGCAAGA+AGG 0.489869 4_1:-7235948 None:intergenic
TCAGTGTCCTGTTGGTGTCT+GGG 0.489992 4_1:-7229984 None:intergenic
TGGAGAGGACGCCATTCAAT+GGG 0.490245 4_1:+7234195 Msa0532710:CDS
TTACCAAATGTGTAGGCACT+TGG 0.492018 4_1:-7230962 None:intergenic
ACAAACAGATTCCATTTACA+TGG 0.493660 4_1:+7235103 Msa0532710:CDS
AGACAATCACGTTAACTTCA+AGG 0.495649 4_1:+7235198 Msa0532710:CDS
TTATGAAGCTTATGCGGAAG+AGG 0.496180 4_1:+7235360 Msa0532710:CDS
TAACACGGCGAAGCTATTCA+TGG 0.498028 4_1:+7235594 Msa0532710:CDS
TAATCAGTGTTGGAGGTAGC+AGG 0.499690 4_1:-7233259 None:intergenic
CTTTACCTTCACAAAAGGAT+AGG 0.501285 4_1:-7232165 None:intergenic
TAATGTAGTGATGTCTGATA+AGG 0.501558 4_1:+7233180 Msa0532710:CDS
CTGGTACAACATAACCATAA+TGG 0.503283 4_1:-7235894 None:intergenic
AACAATCCTCAATATAATAG+TGG 0.503991 4_1:+7233730 Msa0532710:CDS
TGGAGAAGAGTTGTCGAAAT+GGG 0.504063 4_1:+7230775 Msa0532710:CDS
TCTTTATGATCTCGGTGTGT+CGG 0.506170 4_1:+7229819 Msa0532710:five_prime_UTR
GCCAGGGAATTTCTGGGCAA+AGG 0.507390 4_1:+7232612 Msa0532710:CDS
GCTTAGGCCTTTGAATGAGA+AGG 0.507783 4_1:+7230850 Msa0532710:CDS
AATACACATATCTATCTCAA+TGG 0.510126 4_1:-7235824 None:intergenic
AGTTCTGCCAGGGAATTTCT+GGG 0.510390 4_1:+7232606 Msa0532710:CDS
ATGACTGCTTCCCCTGAGAC+AGG 0.512104 4_1:+7234167 Msa0532710:CDS
TGAAACGAAGCAGGTATATG+AGG 0.513008 4_1:+7231502 Msa0532710:CDS
GAAAGATCAACAGATAGAAA+AGG 0.513788 4_1:+7233300 Msa0532710:CDS
TTTCTGAGGAAGAGAGGAAA+AGG 0.515753 4_1:+7235384 Msa0532710:CDS
TCGAAATGGGAGAAGATGAA+TGG 0.517570 4_1:+7230788 Msa0532710:CDS
ATTTGACATGTTTCCTGACA+TGG 0.518750 4_1:-7234096 None:intergenic
AAGTCCAAACATCTCCTTGA+GGG 0.519271 4_1:-7235555 None:intergenic
TGTTGCTGGGATGAAAGAAA+TGG 0.520014 4_1:+7234406 Msa0532710:CDS
CATCTCAGGTATCATCAGCT+GGG 0.520906 4_1:+7232805 Msa0532710:CDS
AAAGCAGCTTGTTGATGGTC+AGG 0.521553 4_1:+7234445 Msa0532710:CDS
AGACCATTGAAAGTTCTGCC+AGG 0.523244 4_1:+7232595 Msa0532710:intron
TGTTCAACATGACTCCGTGC+AGG 0.523415 4_1:-7233097 None:intergenic
CAAAGCTACATAATCAGTGT+TGG 0.525785 4_1:-7233269 None:intergenic
GACACAGTGTGAGAGCTCTT+CGG 0.528394 4_1:+7235321 Msa0532710:intron
CTTGCAGCTCAGAGACAAGT+AGG 0.530862 4_1:+7232440 Msa0532710:intron
GAGAAGATGAATGGAGTTAG+TGG 0.531131 4_1:+7230797 Msa0532710:CDS
ACTTACTACACTAGCAGATA+GGG 0.532412 4_1:-7232646 None:intergenic
GATCCAATGCAGGAGGCACC+AGG 0.532906 4_1:+7234960 Msa0532710:CDS
TGAGGATTTGCTGCGCATGG+TGG 0.534211 4_1:+7233481 Msa0532710:CDS
GGTATATGAGGAAGGAGCTA+GGG 0.535524 4_1:+7231514 Msa0532710:CDS
CAGTGGAAAGACATATACTA+TGG 0.536613 4_1:+7231683 Msa0532710:CDS
AACTGCAGAGACCAGTCTAA+AGG 0.537534 4_1:-7234987 None:intergenic
AAAGAGTTGGCCAGGTTGGA+AGG 0.537609 4_1:+7233223 Msa0532710:CDS
GTATATTAGCAATGCCACTT+TGG 0.538179 4_1:-7235667 None:intergenic
TCTTGCTGAATCAAGGATTG+AGG 0.544535 4_1:+7233463 Msa0532710:CDS
ATCACAAATTAACTAGAAGC+CGG 0.545574 4_1:+7234126 Msa0532710:CDS
CCTAAACAAAAGAAAGAAGT+AGG 0.545806 4_1:-7235075 None:intergenic
CGACTGTCATTCGTAAGCTG+AGG 0.545889 4_1:+7232877 Msa0532710:CDS
AGAGCAGGGACGAGCCCTCA+AGG 0.546310 4_1:+7235541 Msa0532710:CDS
ACTTACAGAGGAGACTCTAC+AGG 0.547856 4_1:+7232120 Msa0532710:CDS
TTGGATTGAATTCAAAGCGC+AGG 0.548324 4_1:+7235426 Msa0532710:CDS
CTGAGGAATGTGAAAGATGT+AGG 0.548594 4_1:+7234933 Msa0532710:CDS
GGAAAAGGCTATTTAACGAA+TGG 0.550100 4_1:+7235399 Msa0532710:CDS
TTTACGTGTCAGTGTCCTGT+TGG 0.550342 4_1:-7229992 None:intergenic
ATACTGCAGCCTTGCTTAGG+TGG 0.551117 4_1:+7233040 Msa0532710:CDS
GATTAGCTTGTTAATTGAGG+TGG 0.551277 4_1:+7230711 Msa0532710:five_prime_UTR
TATGGTTATGTTGTACCAGA+TGG 0.552781 4_1:+7235898 Msa0532710:three_prime_UTR
TTTGCTGCGCATGGTGGGGA+AGG 0.553538 4_1:+7233487 Msa0532710:CDS
GGCTTTGACAGTATCTGGAG+GGG 0.554999 4_1:+7234004 Msa0532710:CDS
CATTGCGTGTTGAATTTGGT+AGG 0.556021 4_1:+7229665 None:intergenic
GGATCATCACGCAACCTAAG+TGG 0.556914 4_1:-7231972 None:intergenic
AACTGAATCATTTGAAACAC+AGG 0.558277 4_1:-7229926 None:intergenic
TGTAGGTGTTGATCCAATGC+AGG 0.558725 4_1:+7234950 Msa0532710:CDS
GAGGATTTGCTGCGCATGGT+GGG 0.558929 4_1:+7233482 Msa0532710:CDS
GTTCAACATGACTCCGTGCA+GGG 0.560044 4_1:-7233096 None:intergenic
CAGTGTGAGAGCTCTTCGGC+GGG 0.560979 4_1:+7235325 Msa0532710:intron
CAATAGTTGCGAGGCTAGTG+AGG 0.563553 4_1:+7235513 Msa0532710:CDS
AGCTACATAATCAGTGTTGG+AGG 0.564822 4_1:-7233266 None:intergenic
GGGTGACTGTGAAACGAAGC+AGG 0.565088 4_1:+7231493 Msa0532710:CDS
AGAAGTTCGATGTGTCGAGT+TGG 0.565179 4_1:+7233920 Msa0532710:CDS
AATACAACCCTCTAGAATGT+AGG 0.566519 4_1:-7235855 None:intergenic
GACCATTGAAAGTTCTGCCA+GGG 0.568444 4_1:+7232596 Msa0532710:intron
GCATATGGGCAAACAAGCAG+TGG 0.571286 4_1:+7231666 Msa0532710:CDS
AGGGGAAAATGGAACAAGCC+AGG 0.572223 4_1:+7234022 Msa0532710:CDS
ACTATTAACCTACATTCTAG+AGG 0.572333 4_1:+7235847 Msa0532710:three_prime_UTR
GAACTCTCTAATGCGTATGT+TGG 0.572921 4_1:-7233707 None:intergenic
CTATTAACCTACATTCTAGA+GGG 0.574371 4_1:+7235848 Msa0532710:three_prime_UTR
GGATTCCCTGGAAGACCAGA+TGG 0.574754 4_1:+7234227 Msa0532710:CDS
CACCAGGAACTCCTTTAGAC+TGG 0.575102 4_1:+7234976 Msa0532710:CDS
AAGAAAGAAGTAGGTCCTGT+GGG 0.577186 4_1:-7235066 None:intergenic
AGAGGCTTTCTGAGGAAGAG+AGG 0.579952 4_1:+7235378 Msa0532710:CDS
TGTGATGCTCCGAACAACTC+CGG 0.580662 4_1:-7234145 None:intergenic
GCACTGACAACACTCCACTT+AGG 0.581250 4_1:+7231958 Msa0532710:CDS
CTCCATTTCTCCTGTCTCAG+GGG 0.581535 4_1:-7234177 None:intergenic
AGTGATGTCTGATAAGGCCT+TGG 0.583008 4_1:+7233186 Msa0532710:CDS
GGAAAGACATATACTATGGT+CGG 0.584005 4_1:+7231687 Msa0532710:CDS
ATTTAACTTACCAAATGTGT+AGG 0.586180 4_1:-7230969 None:intergenic
TTCTATTGGAAGTCCGTCAG+TGG 0.593519 4_1:+7234319 Msa0532710:CDS
TGGCTTTGACAGTATCTGGA+GGG 0.594075 4_1:+7234003 Msa0532710:CDS
ACTGGTCTCTGCAGTTCAAG+AGG 0.598036 4_1:+7234994 Msa0532710:CDS
CTTGAGATCATCTGGTGATG+AGG 0.598316 4_1:+7234361 Msa0532710:CDS
TATGCGGAAGAGGCTTTCTG+AGG 0.600165 4_1:+7235370 Msa0532710:CDS
GAATGCAGTAAGGGAAGACA+TGG 0.600216 4_1:+7232983 Msa0532710:intron
TACCGGAATACATTGCGTGA+AGG 0.600495 4_1:+7230929 Msa0532710:CDS
GACAGTGGAAGTATTCAAGA+TGG 0.602866 4_1:+7233754 Msa0532710:CDS
GCTTCACACCTCAGCTAACA+CGG 0.603431 4_1:+7235579 Msa0532710:CDS
AGAAGTTACCACTAAAGCAC+AGG 0.604313 4_1:+7233156 Msa0532710:CDS
CTAGCATTGCCACCTAAGCA+AGG 0.606325 4_1:-7233049 None:intergenic
ACGAAGCAGGTATATGAGGA+AGG 0.610187 4_1:+7231506 Msa0532710:CDS
ATAAACCATCTGGTCTTCCA+GGG 0.610955 4_1:-7234232 None:intergenic
AAAGAAAGAAGTAGGTCCTG+TGG 0.614224 4_1:-7235067 None:intergenic
GATTGAGGATTTGCTGCGCA+TGG 0.614235 4_1:+7233478 Msa0532710:CDS
TTTGCACTTTGAGCCCTGCA+CGG 0.615755 4_1:+7233083 Msa0532710:CDS
GAGGAGACTCTACAGGATTG+GGG 0.620881 4_1:+7232127 Msa0532710:CDS
GCTATGTACCATTAACCCAC+AGG 0.622275 4_1:+7235051 Msa0532710:CDS
TAGCTTCGCCGTGTTAGCTG+AGG 0.622747 4_1:-7235587 None:intergenic
AAATGCTTATGAAGCTTATG+CGG 0.625303 4_1:+7235354 Msa0532710:CDS
GAAATCGCTCTTTCAGTAGT+CGG 0.626438 4_1:+7231536 Msa0532710:CDS
CATGTAGAGATTGTTCATCA+TGG 0.628406 4_1:-7234073 None:intergenic
ATCGCTCTTTCAGTAGTCGG+TGG 0.629355 4_1:+7231539 Msa0532710:CDS
TCCCCGTTGTCACTTAAGGA+CGG 0.631420 4_1:-7233978 None:intergenic
TACTACACTAGCAGATAGGG+TGG 0.637065 4_1:-7232643 None:intergenic
CCTCTAAGGTCATCCACTGA+CGG 0.638852 4_1:-7234332 None:intergenic
TTGGCTTTGACAGTATCTGG+AGG 0.640008 4_1:+7234002 Msa0532710:CDS
TTGCAGCACTCTGCATTACG+TGG 0.640783 4_1:-7235493 None:intergenic
TCGAAAGAGTAAGTAAACTC+CGG 0.644488 4_1:-7232857 None:intergenic
GCTGGGGTGAGATTGAAAGA+AGG 0.644962 4_1:+7232822 Msa0532710:CDS
CATTAGGAGTGTGTACAGCA+GGG 0.646177 4_1:+7235695 Msa0532710:three_prime_UTR
CAATATAATAGTGGAGACAG+TGG 0.646811 4_1:+7233739 Msa0532710:CDS
GATCCGTCCTTAAGTGACAA+CGG 0.648355 4_1:+7233975 Msa0532710:CDS
AGGATTTGCTGCGCATGGTG+GGG 0.651154 4_1:+7233483 Msa0532710:CDS
ATCTCAGGTATCATCAGCTG+GGG 0.651883 4_1:+7232806 Msa0532710:CDS
AAAAGGCTATTTAACGAATG+GGG 0.654647 4_1:+7235401 Msa0532710:CDS
GTTGGGACCACAAATGCTTG+AGG 0.665970 4_1:-7233689 None:intergenic
CTGAGACAGGAGAAATGGAG+AGG 0.668611 4_1:+7234180 Msa0532710:CDS
ACAGTGTGAGAGCTCTTCGG+CGG 0.670786 4_1:+7235324 Msa0532710:intron
TGAATCATTTGAAACACAGG+AGG 0.678773 4_1:-7229923 None:intergenic
AGGAGACTCTACAGGATTGG+GGG 0.680080 4_1:+7232128 Msa0532710:CDS
AGGTGTTGATCCAATGCAGG+AGG 0.686174 4_1:+7234953 Msa0532710:CDS
AACAGATTCCATTTACATGG+AGG 0.691503 4_1:+7235106 Msa0532710:CDS
GTGGCAGACAGAGTATTTCG+GGG 0.692851 4_1:+7231473 Msa0532710:intron
AGAGTGCTGCAATAGTTGCG+AGG 0.694058 4_1:+7235504 Msa0532710:CDS
TAGGTTGCGTGATGATCCTG+AGG 0.705593 4_1:+7231977 Msa0532710:CDS
TAAGTCCAAACATCTCCTTG+AGG 0.730477 4_1:-7235556 None:intergenic
CGTTCTAGAGAAACTTACAG+AGG 0.745619 4_1:+7232108 Msa0532710:CDS
GGGAGACAGATAGAAAACTG+AGG 0.753775 4_1:+7234916 Msa0532710:CDS
TCCGTCCTTAAGTGACAACG+GGG 0.757636 4_1:+7233977 Msa0532710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTCTATATATCTTTTT+CGG + chr4_1:7229849-7229868 Msa0532710:five_prime_UTR 10.0%
!! GTAATTAAACTATTAATAAT+TGG + chr4_1:7231756-7231775 Msa0532710:intron 10.0%
!! TAATTATTAATATTAATGCA+AGG - chr4_1:7233615-7233634 None:intergenic 10.0%
!! TATTAATAATTATCTTGATT+TGG + chr4_1:7233623-7233642 Msa0532710:intron 10.0%
!!! CTATTCTAAAAAATGATAAT+TGG + chr4_1:7230164-7230183 Msa0532710:intron 15.0%
!! TCATAAATTAATCATAATGA+TGG - chr4_1:7230572-7230591 None:intergenic 15.0%
!! CTAAATCAATTTACATAAAT+TGG + chr4_1:7231251-7231270 Msa0532710:intron 15.0%
!!! TATAAAGATATCTTTTTTAG+AGG - chr4_1:7234629-7234648 None:intergenic 15.0%
!! ATTATTCTTCTTTATGATCT+CGG + chr4_1:7229811-7229830 Msa0532710:five_prime_UTR 20.0%
!!! AAAGTAACAGATTTTTTTAC+TGG - chr4_1:7230100-7230119 None:intergenic 20.0%
!! TCAATTTACATAAATTGGTA+AGG + chr4_1:7231256-7231275 Msa0532710:intron 20.0%
!! TTGATATAAATATCCAAGTT+TGG - chr4_1:7231315-7231334 None:intergenic 20.0%
!!! TGAATGCCTTTTAAATATAT+TGG + chr4_1:7232000-7232019 Msa0532710:intron 20.0%
!! ATCAGTCCAATATATTTAAA+AGG - chr4_1:7232009-7232028 None:intergenic 20.0%
!! GATACAAGTTTAATACATAA+AGG + chr4_1:7232031-7232050 Msa0532710:intron 20.0%
!!! TAGCTTTCTTGTTATATATA+TGG + chr4_1:7232197-7232216 Msa0532710:intron 20.0%
!! AAAATAAATTAAACTTCCGA+GGG - chr4_1:7232915-7232934 None:intergenic 20.0%
!!! ACGAATTTTAATTATTCAGA+TGG + chr4_1:7233406-7233425 Msa0532710:intron 20.0%
!! TTTAATTATTCAGATGGATA+AGG + chr4_1:7233412-7233431 Msa0532710:intron 20.0%
!! TTCAATCCATTAAATTTAGA+TGG + chr4_1:7234263-7234282 Msa0532710:CDS 20.0%
!! ATGAAATTCAAGAAACAATA+AGG - chr4_1:7234493-7234512 None:intergenic 20.0%
!!! TATAGAGATATCTTTTTTAG+AGG - chr4_1:7234660-7234679 None:intergenic 20.0%
!!! AAAATTTTGTTACCAGATAT+AGG + chr4_1:7234679-7234698 Msa0532710:intron 20.0%
!! ACATGATTATATTTATATGC+AGG + chr4_1:7234815-7234834 Msa0532710:intron 20.0%
!!! TGATATATTTAGAATCTAAG+TGG + chr4_1:7235257-7235276 Msa0532710:intron 20.0%
!! AAAACAAAAAAGAATGACTA+AGG - chr4_1:7235641-7235660 None:intergenic 20.0%
!!! TCTCTGTTTTTCAAAATCAT+CGG - chr4_1:7230023-7230042 None:intergenic 25.0%
!!! ATTTTGAAAAACAGAGAACA+AGG + chr4_1:7230026-7230045 Msa0532710:five_prime_UTR 25.0%
! ATAGTGTAAACTGAAAAACA+AGG + chr4_1:7230053-7230072 Msa0532710:five_prime_UTR 25.0%
! AAAAGAGAAAAAGTGATGAT+GGG - chr4_1:7230233-7230252 None:intergenic 25.0%
! AAAAAGAGAAAAAGTGATGA+TGG - chr4_1:7230234-7230253 None:intergenic 25.0%
!!! TATAACAGAAGTCTTGTTTT+TGG + chr4_1:7230363-7230382 Msa0532710:intron 25.0%
!! ACGTTTTTATCATAGTTAGT+TGG - chr4_1:7230404-7230423 None:intergenic 25.0%
! TTATTAACTACCGCAATTAA+TGG + chr4_1:7230517-7230536 Msa0532710:intron 25.0%
! TATTAACTACCGCAATTAAT+GGG + chr4_1:7230518-7230537 Msa0532710:intron 25.0%
! TAACAAAAACCCATTAATTG+CGG - chr4_1:7230530-7230549 None:intergenic 25.0%
!!! TTTTTCTCTTTTAGGAAACA+TGG + chr4_1:7230672-7230691 Msa0532710:intron 25.0%
!!! TTTTCTCTTTTAGGAAACAT+GGG + chr4_1:7230673-7230692 Msa0532710:intron 25.0%
!! ATTTAACTTACCAAATGTGT+AGG - chr4_1:7230972-7230991 None:intergenic 25.0%
! AAGTTAAGATCATGTCAATT+GGG - chr4_1:7231176-7231195 None:intergenic 25.0%
! AAAGTTAAGATCATGTCAAT+TGG - chr4_1:7231177-7231196 None:intergenic 25.0%
! TTAATGTTGATATGAACACT+TGG + chr4_1:7231206-7231225 Msa0532710:intron 25.0%
! ATTATGACACATTAGATTGA+TGG + chr4_1:7231406-7231425 Msa0532710:intron 25.0%
!!! TTCTGAATATTTGTTGTGAT+TGG + chr4_1:7231451-7231470 Msa0532710:intron 25.0%
! GTGAGTATAAATTAGTATGT+TGG + chr4_1:7231570-7231589 Msa0532710:intron 25.0%
! TATGTTAATCAAGAAGTAGA+AGG - chr4_1:7231614-7231633 None:intergenic 25.0%
! TTCTACTTCTTGATTAACAT+AGG + chr4_1:7231613-7231632 Msa0532710:intron 25.0%
!!! ATATTTTTGACTACGCAAAA+AGG + chr4_1:7231733-7231752 Msa0532710:CDS 25.0%
!!! TATTTTTGACTACGCAAAAA+GGG + chr4_1:7231734-7231753 Msa0532710:CDS 25.0%
! TATTTAACATTGGATGCAAT+GGG - chr4_1:7232240-7232259 None:intergenic 25.0%
! TTGAAAAGTAGTGACTATAA+CGG + chr4_1:7232330-7232349 Msa0532710:intron 25.0%
! TTTAAATCCATCACTTATTC+AGG + chr4_1:7232677-7232696 Msa0532710:intron 25.0%
! TTAAATCCATCACTTATTCA+GGG + chr4_1:7232678-7232697 Msa0532710:intron 25.0%
! CAAAATAAATTAAACTTCCG+AGG - chr4_1:7232916-7232935 None:intergenic 25.0%
!!! AATAATTATCTTGATTTGGC+AGG + chr4_1:7233627-7233646 Msa0532710:intron 25.0%
! AACAATCCTCAATATAATAG+TGG + chr4_1:7233730-7233749 Msa0532710:CDS 25.0%
! TATACAGGAAGGAATATAAA+AGG - chr4_1:7233785-7233804 None:intergenic 25.0%
! AAACTATTTACTATACAGGA+AGG - chr4_1:7233796-7233815 None:intergenic 25.0%
! TTCCTGTATAGTAAATAGTT+TGG + chr4_1:7233795-7233814 Msa0532710:intron 25.0%
! TACCAAACTATTTACTATAC+AGG - chr4_1:7233800-7233819 None:intergenic 25.0%
! GCTAACAAATAAATAATGAC+CGG - chr4_1:7233861-7233880 None:intergenic 25.0%
! GTTGAACCATCTAAATTTAA+TGG - chr4_1:7234272-7234291 None:intergenic 25.0%
!!! TAAGTCACTTCTTTTTTTAG+AGG + chr4_1:7234545-7234564 Msa0532710:intron 25.0%
! TATTAGCAAACATGGATATA+TGG + chr4_1:7234788-7234807 Msa0532710:intron 25.0%
! ATTAGCAAACATGGATATAT+GGG + chr4_1:7234789-7234808 Msa0532710:intron 25.0%
! AAAAAGAGATAATTGAACTG+TGG + chr4_1:7235021-7235040 Msa0532710:CDS 25.0%
!!! CTACTTCTTTCTTTTGTTTA+GGG + chr4_1:7235076-7235095 Msa0532710:CDS 25.0%
!!! TACTTCTTTCTTTTGTTTAG+GGG + chr4_1:7235077-7235096 Msa0532710:CDS 25.0%
! CATCAAAAAATGTTTCTTTC+AGG - chr4_1:7235154-7235173 None:intergenic 25.0%
! TCACATACTGAAATAAAAGT+AGG - chr4_1:7235240-7235259 None:intergenic 25.0%
! AATACACATATCTATCTCAA+TGG - chr4_1:7235827-7235846 None:intergenic 25.0%
! AACTGAATCATTTGAAACAC+AGG - chr4_1:7229929-7229948 None:intergenic 30.0%
TGTAAACTGAAAAACAAGGT+AGG + chr4_1:7230057-7230076 Msa0532710:intron 30.0%
! TTGTTCTCAAGCATTGTTTA+AGG + chr4_1:7230118-7230137 Msa0532710:intron 30.0%
TGATAATTGGTTACTGTAGA+AGG + chr4_1:7230177-7230196 Msa0532710:intron 30.0%
! TGAAGCTTTGTATCAAAGAA+TGG + chr4_1:7230272-7230291 Msa0532710:intron 30.0%
!!! GTTTTTGGTCGTGATAATAT+TGG + chr4_1:7230378-7230397 Msa0532710:intron 30.0%
!!! TAGCATTCTGTTTTTGTCTT+TGG + chr4_1:7230431-7230450 Msa0532710:intron 30.0%
!! TCTTTGGTCTTTCTTTTTCT+TGG + chr4_1:7230447-7230466 Msa0532710:intron 30.0%
! TTTTTGTTACCTTCTTCGTT+TGG + chr4_1:7230541-7230560 Msa0532710:intron 30.0%
TAAAAGAGAAAAAGCGAAAC+GGG - chr4_1:7230665-7230684 None:intergenic 30.0%
CTAAAAGAGAAAAAGCGAAA+CGG - chr4_1:7230666-7230685 None:intergenic 30.0%
!!! AACATGGGTTGTTTTTGAAA+TGG + chr4_1:7230688-7230707 Msa0532710:five_prime_UTR 30.0%
!!! ACATGGGTTGTTTTTGAAAT+GGG + chr4_1:7230689-7230708 Msa0532710:five_prime_UTR 30.0%
TTAATTGAGGTGGAAAAAGA+GGG + chr4_1:7230721-7230740 Msa0532710:five_prime_UTR 30.0%
GTTTGGAAGTGAGAAAAAAT+GGG + chr4_1:7230743-7230762 Msa0532710:exon 30.0%
!! AGAAGATTCTTGTGTTACTT+AGG + chr4_1:7230828-7230847 Msa0532710:CDS 30.0%
GAAATTTCCTTCTCATTCAA+AGG - chr4_1:7230860-7230879 None:intergenic 30.0%
! ATGATACTACGATTTTGTAC+CGG + chr4_1:7230912-7230931 Msa0532710:CDS 30.0%
! AAAAGAGTACATCAAAGCTA+GGG - chr4_1:7231153-7231172 None:intergenic 30.0%
!! GTCAATTTTTATTTGCCTGT+TGG + chr4_1:7231228-7231247 Msa0532710:intron 30.0%
! TGTAAATTGATTTAGCCAAC+AGG - chr4_1:7231246-7231265 None:intergenic 30.0%
!! TTGTTTTTCTTCTCCAAACT+TGG + chr4_1:7231299-7231318 Msa0532710:intron 30.0%
TATTCAGAAAAACTCTGTTC+AGG - chr4_1:7231440-7231459 None:intergenic 30.0%
!! TGAATATTTGTTGTGATTGG+TGG + chr4_1:7231454-7231473 Msa0532710:intron 30.0%
! AACATAGTGCTATTAACACA+AGG + chr4_1:7231842-7231861 Msa0532710:intron 30.0%
AATTCCTTTACCTTCACAAA+AGG - chr4_1:7232173-7232192 None:intergenic 30.0%
! TTTTGTGAAGGTAAAGGAAT+TGG + chr4_1:7232172-7232191 Msa0532710:intron 30.0%
CTATTTAACATTGGATGCAA+TGG - chr4_1:7232241-7232260 None:intergenic 30.0%
TTGCATCCAATGTTAAATAG+CGG + chr4_1:7232241-7232260 Msa0532710:intron 30.0%
! ATCTTGAACTCTTTTCATTC+AGG - chr4_1:7232475-7232494 None:intergenic 30.0%
ATCTCACCAAATTATCAGAT+TGG + chr4_1:7232493-7232512 Msa0532710:CDS 30.0%
CACATACCAATCTGATAATT+TGG - chr4_1:7232502-7232521 None:intergenic 30.0%
TAAATCCATCACTTATTCAG+GGG + chr4_1:7232679-7232698 Msa0532710:intron 30.0%
!! TCTGCAGAATTTTGTTGATT+TGG + chr4_1:7232767-7232786 Msa0532710:intron 30.0%
!!! AGAATTTTGTTGATTTGGCA+GGG + chr4_1:7232772-7232791 Msa0532710:intron 30.0%
TAAGTAAACTCCGGTTTATA+TGG - chr4_1:7232851-7232870 None:intergenic 30.0%
TAATGTAGTGATGTCTGATA+AGG + chr4_1:7233180-7233199 Msa0532710:CDS 30.0%
GAAAGATCAACAGATAGAAA+AGG + chr4_1:7233300-7233319 Msa0532710:CDS 30.0%
TTATCAACATGTAAGGAGTA+AGG - chr4_1:7233385-7233404 None:intergenic 30.0%
ATTCGTGTTATCAACATGTA+AGG - chr4_1:7233392-7233411 None:intergenic 30.0%
TCAGATGGATAAGGAAATTA+AGG + chr4_1:7233421-7233440 Msa0532710:intron 30.0%
GAAGGATCAGATATCTAAAA+AGG + chr4_1:7233505-7233524 Msa0532710:CDS 30.0%
ACGAGCAAATACAAATTTAG+AGG - chr4_1:7233582-7233601 None:intergenic 30.0%
ATCACAAATTAACTAGAAGC+CGG + chr4_1:7234126-7234145 Msa0532710:CDS 30.0%
! ATGGTTCAACAAGATTTTCA+AGG + chr4_1:7234282-7234301 Msa0532710:CDS 30.0%
TTCCTAGATATTAGCAAACA+TGG + chr4_1:7234780-7234799 Msa0532710:intron 30.0%
! ATCCATGTTTGCTAATATCT+AGG - chr4_1:7234785-7234804 None:intergenic 30.0%
! TCATTCTTTTCTGAATTGCA+GGG + chr4_1:7234891-7234910 Msa0532710:intron 30.0%
CCTAAACAAAAGAAAGAAGT+AGG - chr4_1:7235078-7235097 None:intergenic 30.0%
!! CCTACTTCTTTCTTTTGTTT+AGG + chr4_1:7235075-7235094 Msa0532710:CDS 30.0%
ACAAACAGATTCCATTTACA+TGG + chr4_1:7235103-7235122 Msa0532710:CDS 30.0%
!! TGTTGACATGTGTTTGTTTT+GGG + chr4_1:7235299-7235318 Msa0532710:intron 30.0%
AAATGCTTATGAAGCTTATG+CGG + chr4_1:7235354-7235373 Msa0532710:CDS 30.0%
GAAAAGGCTATTTAACGAAT+GGG + chr4_1:7235400-7235419 Msa0532710:CDS 30.0%
AAAAGGCTATTTAACGAATG+GGG + chr4_1:7235401-7235420 Msa0532710:CDS 30.0%
TGCTAATATACGTCTTCATT+AGG + chr4_1:7235679-7235698 Msa0532710:three_prime_UTR 30.0%
ATACAAACTACTCACTTTAG+AGG + chr4_1:7235775-7235794 Msa0532710:three_prime_UTR 30.0%
ACTATTAACCTACATTCTAG+AGG + chr4_1:7235847-7235866 Msa0532710:three_prime_UTR 30.0%
CTATTAACCTACATTCTAGA+GGG + chr4_1:7235848-7235867 Msa0532710:three_prime_UTR 30.0%
! TTTTAATCATTTTCCTCCTC+TGG + chr4_1:7235999-7236018 Msa0532710:three_prime_UTR 30.0%
! ACTTCTTTTTCTTCAGATCG+TGG + chr4_1:7229690-7229709 Msa0532710:five_prime_UTR 35.0%
! TGAATCATTTGAAACACAGG+AGG - chr4_1:7229926-7229945 None:intergenic 35.0%
TGAAAAACAGAGAACAAGGA+TGG + chr4_1:7230030-7230049 Msa0532710:five_prime_UTR 35.0%
! TTCTCAAGCATTGTTTAAGG+TGG + chr4_1:7230121-7230140 Msa0532710:intron 35.0%
AATTGGTTACTGTAGAAGGA+AGG + chr4_1:7230181-7230200 Msa0532710:intron 35.0%
GGTTTCAAATACATGAGTTC+TGG + chr4_1:7230202-7230221 Msa0532710:intron 35.0%
! TGGTCTTTCTTTTTCTTGGT+TGG + chr4_1:7230451-7230470 Msa0532710:intron 35.0%
ATGGATTTACCAAACGAAGA+AGG - chr4_1:7230553-7230572 None:intergenic 35.0%
!!! CGTTTCGCTTTTTCTCTTTT+AGG + chr4_1:7230664-7230683 Msa0532710:intron 35.0%
!! TGGGATTAGCTTGTTAATTG+AGG + chr4_1:7230708-7230727 Msa0532710:five_prime_UTR 35.0%
!! GATTAGCTTGTTAATTGAGG+TGG + chr4_1:7230711-7230730 Msa0532710:five_prime_UTR 35.0%
GTTAATTGAGGTGGAAAAAG+AGG + chr4_1:7230720-7230739 Msa0532710:five_prime_UTR 35.0%
GGTTTGGAAGTGAGAAAAAA+TGG + chr4_1:7230742-7230761 Msa0532710:exon 35.0%
!! TTCTTGTGTTACTTAGGCTT+AGG + chr4_1:7230834-7230853 Msa0532710:CDS 35.0%
TGCTAATGAATCTGCAGATT+GGG + chr4_1:7230880-7230899 Msa0532710:CDS 35.0%
AAATCTTTCGCGAGTAAGTT+CGG - chr4_1:7231114-7231133 None:intergenic 35.0%
! GAAAAGAGTACATCAAAGCT+AGG - chr4_1:7231154-7231173 None:intergenic 35.0%
GTTAATCAAGAAGTAGAAGG+TGG - chr4_1:7231611-7231630 None:intergenic 35.0%
!! TCAGCGAGTATTTTTGCATA+TGG + chr4_1:7231651-7231670 Msa0532710:intron 35.0%
!! CAGCGAGTATTTTTGCATAT+GGG + chr4_1:7231652-7231671 Msa0532710:intron 35.0%
CAGTGGAAAGACATATACTA+TGG + chr4_1:7231683-7231702 Msa0532710:CDS 35.0%
GGAAAGACATATACTATGGT+CGG + chr4_1:7231687-7231706 Msa0532710:CDS 35.0%
!! ATTTAAAAGGCATTCACCTC+AGG - chr4_1:7231996-7232015 None:intergenic 35.0%
! GTTTTCCCTTTTTGTTAGAG+AGG + chr4_1:7232082-7232101 Msa0532710:intron 35.0%
!! TCTGTAAGTTTCTCTAGAAC+GGG - chr4_1:7232109-7232128 None:intergenic 35.0%
! CTCTGTAAGTTTCTCTAGAA+CGG - chr4_1:7232110-7232129 None:intergenic 35.0%
CTTTACCTTCACAAAAGGAT+AGG - chr4_1:7232168-7232187 None:intergenic 35.0%
! CTATCCTTTTGTGAAGGTAA+AGG + chr4_1:7232166-7232185 Msa0532710:intron 35.0%
TAATTGCAGATCGCAGAAAA+TGG - chr4_1:7232395-7232414 None:intergenic 35.0%
AGAACTTTCAATGGTCTGAA+AGG - chr4_1:7232592-7232611 None:intergenic 35.0%
ACTTACTACACTAGCAGATA+GGG - chr4_1:7232649-7232668 None:intergenic 35.0%
AACTTACTACACTAGCAGAT+AGG - chr4_1:7232650-7232669 None:intergenic 35.0%
TTTATCCCCTGAATAAGTGA+TGG - chr4_1:7232687-7232706 None:intergenic 35.0%
ATTCAGGGGATAAAATAGTC+AGG + chr4_1:7232693-7232712 Msa0532710:intron 35.0%
TTCAGGGGATAAAATAGTCA+GGG + chr4_1:7232694-7232713 Msa0532710:intron 35.0%
!!! CAGAATTTTGTTGATTTGGC+AGG + chr4_1:7232771-7232790 Msa0532710:intron 35.0%
AAGAAGGTTGCCATATAAAC+CGG + chr4_1:7232838-7232857 Msa0532710:CDS 35.0%
TCGAAAGAGTAAGTAAACTC+CGG - chr4_1:7232860-7232879 None:intergenic 35.0%
TAATGTGTCTGAATGCAGTA+AGG + chr4_1:7232973-7232992 Msa0532710:intron 35.0%
AATGTGTCTGAATGCAGTAA+GGG + chr4_1:7232974-7232993 Msa0532710:intron 35.0%
TACATTAACCTGTGCTTTAG+TGG - chr4_1:7233167-7233186 None:intergenic 35.0%
! TTTTTGCAATTGCTTGACCA+AGG - chr4_1:7233206-7233225 None:intergenic 35.0%
CAAGCAATTGCAAAAAGAGT+TGG + chr4_1:7233210-7233229 Msa0532710:CDS 35.0%
CAAAGCTACATAATCAGTGT+TGG - chr4_1:7233272-7233291 None:intergenic 35.0%
TTTGGCAGGAAGAAGATTTA+TGG + chr4_1:7233641-7233660 Msa0532710:intron 35.0%
TTGGCAGGAAGAAGATTTAT+GGG + chr4_1:7233642-7233661 Msa0532710:intron 35.0%
AACTCTCTAATGCGTATGTT+GGG - chr4_1:7233709-7233728 None:intergenic 35.0%
CTGTCTCCACTATTATATTG+AGG - chr4_1:7233739-7233758 None:intergenic 35.0%
! CAATATAATAGTGGAGACAG+TGG + chr4_1:7233739-7233758 Msa0532710:CDS 35.0%
GAGTAGAATTGAATGATGTC+CGG + chr4_1:7233839-7233858 Msa0532710:intron 35.0%
CTTCTTTGCAGTATTCATCA+AGG - chr4_1:7233905-7233924 None:intergenic 35.0%
TCAAATGTGTAGACATTTCC+TGG - chr4_1:7234043-7234062 None:intergenic 35.0%
CATGTAGAGATTGTTCATCA+TGG - chr4_1:7234076-7234095 None:intergenic 35.0%
ATTTGACATGTTTCCTGACA+TGG - chr4_1:7234099-7234118 None:intergenic 35.0%
!!! CCTTTTTCAAACCCATTGAA+TGG - chr4_1:7234209-7234228 None:intergenic 35.0%
! CCATTCAATGGGTTTGAAAA+AGG + chr4_1:7234206-7234225 Msa0532710:CDS 35.0%
AACTTTCTCCATAAACCATC+TGG - chr4_1:7234245-7234264 None:intergenic 35.0%
AACGATTCTCAGTCTTCTAT+TGG + chr4_1:7234305-7234324 Msa0532710:CDS 35.0%
!! TATGAAAAGCAGCTTGTTGA+TGG + chr4_1:7234440-7234459 Msa0532710:CDS 35.0%
CATCAAGATGTAGATTGTAG+TGG - chr4_1:7234852-7234871 None:intergenic 35.0%
CTGCAATTCAGAAAAGAATG+AGG - chr4_1:7234892-7234911 None:intergenic 35.0%
! CTCATTCTTTTCTGAATTGC+AGG + chr4_1:7234890-7234909 Msa0532710:intron 35.0%
AACAGATTCCATTTACATGG+AGG + chr4_1:7235106-7235125 Msa0532710:CDS 35.0%
TTGAAGTTAACGTGATTGTC+TGG - chr4_1:7235199-7235218 None:intergenic 35.0%
AGACAATCACGTTAACTTCA+AGG + chr4_1:7235198-7235217 Msa0532710:CDS 35.0%
AAACAAACACATGTCAACAC+AGG - chr4_1:7235298-7235317 None:intergenic 35.0%
!! GTGTTGACATGTGTTTGTTT+TGG + chr4_1:7235298-7235317 Msa0532710:intron 35.0%
GGAAAAGGCTATTTAACGAA+TGG + chr4_1:7235399-7235418 Msa0532710:CDS 35.0%
TATCAGTGTTGCACCATAAA+CGG - chr4_1:7235469-7235488 None:intergenic 35.0%
! GTATATTAGCAATGCCACTT+TGG - chr4_1:7235670-7235689 None:intergenic 35.0%
!! AATACAACCCTCTAGAATGT+AGG - chr4_1:7235858-7235877 None:intergenic 35.0%
ATTGTATCGTATCGCCATTA+TGG + chr4_1:7235880-7235899 Msa0532710:three_prime_UTR 35.0%
CTGGTACAACATAACCATAA+TGG - chr4_1:7235897-7235916 None:intergenic 35.0%
TATGGTTATGTTGTACCAGA+TGG + chr4_1:7235898-7235917 Msa0532710:three_prime_UTR 35.0%
TTCCTTCTTGCTGCAAATTA+AGG + chr4_1:7235946-7235965 Msa0532710:three_prime_UTR 35.0%
!! AACCTTAATTTGCAGCAAGA+AGG - chr4_1:7235951-7235970 None:intergenic 35.0%
!!! TGTTTTAATATGTCCAGAGG+AGG - chr4_1:7236015-7236034 None:intergenic 35.0%
!!! CGATGTTTTAATATGTCCAG+AGG - chr4_1:7236018-7236037 None:intergenic 35.0%
! TCTTTATGATCTCGGTGTGT+CGG + chr4_1:7229819-7229838 Msa0532710:five_prime_UTR 40.0%
!! AAGGTAGGACCTGTTTTGTT+AGG + chr4_1:7230072-7230091 Msa0532710:intron 40.0%
!! AGGTAGGACCTGTTTTGTTA+GGG + chr4_1:7230073-7230092 Msa0532710:intron 40.0%
TTACTGGTCCCTAACAAAAC+AGG - chr4_1:7230084-7230103 None:intergenic 40.0%
! CAAATACATGAGTTCTGGTG+TGG + chr4_1:7230207-7230226 Msa0532710:intron 40.0%
GAAAAAATGGGAGCTATTGC+TGG + chr4_1:7230755-7230774 Msa0532710:exon 40.0%
TGGAGAAGAGTTGTCGAAAT+GGG + chr4_1:7230775-7230794 Msa0532710:CDS 40.0%
TCGAAATGGGAGAAGATGAA+TGG + chr4_1:7230788-7230807 Msa0532710:CDS 40.0%
GAGAAGATGAATGGAGTTAG+TGG + chr4_1:7230797-7230816 Msa0532710:CDS 40.0%
CTGCTAATGAATCTGCAGAT+TGG + chr4_1:7230879-7230898 Msa0532710:CDS 40.0%
AACCTTCACGCAATGTATTC+CGG - chr4_1:7230934-7230953 None:intergenic 40.0%
TTTCCAAGTGCCTACACATT+TGG + chr4_1:7230959-7230978 Msa0532710:CDS 40.0%
TTACCAAATGTGTAGGCACT+TGG - chr4_1:7230965-7230984 None:intergenic 40.0%
TGAAACGAAGCAGGTATATG+AGG + chr4_1:7231502-7231521 Msa0532710:CDS 40.0%
GAAATCGCTCTTTCAGTAGT+CGG + chr4_1:7231536-7231555 Msa0532710:CDS 40.0%
GCTTCAGTATCATTGTTCTC+TGG + chr4_1:7231801-7231820 Msa0532710:intron 40.0%
!! CGTTCTAGAGAAACTTACAG+AGG + chr4_1:7232108-7232127 Msa0532710:CDS 40.0%
ATAGCGCCGCTATTTAACAT+TGG - chr4_1:7232250-7232269 None:intergenic 40.0%
TCAGGGGATAAAATAGTCAG+GGG + chr4_1:7232695-7232714 Msa0532710:intron 40.0%
AGAAGTTACCACTAAAGCAC+AGG + chr4_1:7233156-7233175 Msa0532710:CDS 40.0%
AATTGCAAAAAGAGTTGGCC+AGG + chr4_1:7233215-7233234 Msa0532710:CDS 40.0%
! AGCTACATAATCAGTGTTGG+AGG - chr4_1:7233269-7233288 None:intergenic 40.0%
AACGTGATCTTGCTGAATCA+AGG + chr4_1:7233456-7233475 Msa0532710:CDS 40.0%
TCTTGCTGAATCAAGGATTG+AGG + chr4_1:7233463-7233482 Msa0532710:CDS 40.0%
GAACTCTCTAATGCGTATGT+TGG - chr4_1:7233710-7233729 None:intergenic 40.0%
!! GACAGTGGAAGTATTCAAGA+TGG + chr4_1:7233754-7233773 Msa0532710:CDS 40.0%
!! GATTTGGCTTTGACAGTATC+TGG + chr4_1:7233999-7234018 Msa0532710:CDS 40.0%
! ATAAACCATCTGGTCTTCCA+GGG - chr4_1:7234235-7234254 None:intergenic 40.0%
! AGCATCCATACTTTTGTTGC+TGG + chr4_1:7234392-7234411 Msa0532710:CDS 40.0%
! GCATCCATACTTTTGTTGCT+GGG + chr4_1:7234393-7234412 Msa0532710:CDS 40.0%
TCATCCCAGCAACAAAAGTA+TGG - chr4_1:7234400-7234419 None:intergenic 40.0%
TGTTGCTGGGATGAAAGAAA+TGG + chr4_1:7234406-7234425 Msa0532710:CDS 40.0%
GTTACGACAAGTCCTATATC+TGG - chr4_1:7234694-7234713 None:intergenic 40.0%
GACACAGATACGATACTACA+TGG - chr4_1:7234741-7234760 None:intergenic 40.0%
GCTAATATCTAGGAAACCCA+GGG - chr4_1:7234775-7234794 None:intergenic 40.0%
TGCTAATATCTAGGAAACCC+AGG - chr4_1:7234776-7234795 None:intergenic 40.0%
! TCTTTTCTGAATTGCAGGGT+CGG + chr4_1:7234895-7234914 Msa0532710:intron 40.0%
CTGAGGAATGTGAAAGATGT+AGG + chr4_1:7234933-7234952 Msa0532710:CDS 40.0%
AAGAAAGAAGTAGGTCCTGT+GGG - chr4_1:7235069-7235088 None:intergenic 40.0%
AAAGAAAGAAGTAGGTCCTG+TGG - chr4_1:7235070-7235089 None:intergenic 40.0%
AAGCTCTACCTCCATGTAAA+TGG - chr4_1:7235117-7235136 None:intergenic 40.0%
TTATGAAGCTTATGCGGAAG+AGG + chr4_1:7235360-7235379 Msa0532710:CDS 40.0%
! TTTCTGAGGAAGAGAGGAAA+AGG + chr4_1:7235384-7235403 Msa0532710:CDS 40.0%
CTATTTAACGAATGGGGCAT+TGG + chr4_1:7235407-7235426 Msa0532710:CDS 40.0%
TTGGATTGAATTCAAAGCGC+AGG + chr4_1:7235426-7235445 Msa0532710:CDS 40.0%
AAGTCCAAACATCTCCTTGA+GGG - chr4_1:7235558-7235577 None:intergenic 40.0%
TAAGTCCAAACATCTCCTTG+AGG - chr4_1:7235559-7235578 None:intergenic 40.0%
!!! TTTGTTTTGCGTCTCCAAAG+TGG + chr4_1:7235653-7235672 Msa0532710:three_prime_UTR 40.0%
CAATGGAGAGACACTTGTTT+CGG - chr4_1:7235810-7235829 None:intergenic 40.0%
TTTACGTGTCAGTGTCCTGT+TGG - chr4_1:7229995-7230014 None:intergenic 45.0%
TGAGGTGGAAAAAGAGGGTT+TGG + chr4_1:7230726-7230745 Msa0532710:five_prime_UTR 45.0%
CTGGAGAAGAGTTGTCGAAA+TGG + chr4_1:7230774-7230793 Msa0532710:CDS 45.0%
GCTTAGGCCTTTGAATGAGA+AGG + chr4_1:7230850-7230869 Msa0532710:CDS 45.0%
TACCGGAATACATTGCGTGA+AGG + chr4_1:7230929-7230948 Msa0532710:CDS 45.0%
! TGGTGGCAGACAGAGTATTT+CGG + chr4_1:7231471-7231490 Msa0532710:intron 45.0%
ACGAAGCAGGTATATGAGGA+AGG + chr4_1:7231506-7231525 Msa0532710:CDS 45.0%
AGGTATATGAGGAAGGAGCT+AGG + chr4_1:7231513-7231532 Msa0532710:CDS 45.0%
GGTATATGAGGAAGGAGCTA+GGG + chr4_1:7231514-7231533 Msa0532710:CDS 45.0%
CGGGTCCTCTCTAACAAAAA+GGG - chr4_1:7232090-7232109 None:intergenic 45.0%
ACGGGTCCTCTCTAACAAAA+AGG - chr4_1:7232091-7232110 None:intergenic 45.0%
ACTTACAGAGGAGACTCTAC+AGG + chr4_1:7232120-7232139 Msa0532710:CDS 45.0%
AGAGGAGACTCTACAGGATT+GGG + chr4_1:7232126-7232145 Msa0532710:CDS 45.0%
! GAGCTCCTATCCTTTTGTGA+AGG + chr4_1:7232160-7232179 Msa0532710:CDS 45.0%
GTCTCTGAGCTGCAAGAATA+AGG - chr4_1:7232436-7232455 None:intergenic 45.0%
AGACCATTGAAAGTTCTGCC+AGG + chr4_1:7232595-7232614 Msa0532710:intron 45.0%
GACCATTGAAAGTTCTGCCA+GGG + chr4_1:7232596-7232615 Msa0532710:intron 45.0%
TTCCCTGGCAGAACTTTCAA+TGG - chr4_1:7232601-7232620 None:intergenic 45.0%
AAGTTCTGCCAGGGAATTTC+TGG + chr4_1:7232605-7232624 Msa0532710:CDS 45.0%
AGTTCTGCCAGGGAATTTCT+GGG + chr4_1:7232606-7232625 Msa0532710:CDS 45.0%
TACTACACTAGCAGATAGGG+TGG - chr4_1:7232646-7232665 None:intergenic 45.0%
CATCTCAGGTATCATCAGCT+GGG + chr4_1:7232805-7232824 Msa0532710:CDS 45.0%
ATCTCAGGTATCATCAGCTG+GGG + chr4_1:7232806-7232825 Msa0532710:CDS 45.0%
GAATGCAGTAAGGGAAGACA+TGG + chr4_1:7232983-7233002 Msa0532710:intron 45.0%
AGTGATGTCTGATAAGGCCT+TGG + chr4_1:7233186-7233205 Msa0532710:CDS 45.0%
!! TTTTAACTCGCCTTCCAACC+TGG - chr4_1:7233236-7233255 None:intergenic 45.0%
! TAATCAGTGTTGGAGGTAGC+AGG - chr4_1:7233262-7233281 None:intergenic 45.0%
TCAGAGTCCTCAAGCATTTG+TGG + chr4_1:7233682-7233701 Msa0532710:CDS 45.0%
AGAAGTTCGATGTGTCGAGT+TGG + chr4_1:7233920-7233939 Msa0532710:CDS 45.0%
GATCCGTCCTTAAGTGACAA+CGG + chr4_1:7233975-7233994 Msa0532710:CDS 45.0%
ATCCGTCCTTAAGTGACAAC+GGG + chr4_1:7233976-7233995 Msa0532710:CDS 45.0%
! CAAATCCCCGTTGTCACTTA+AGG - chr4_1:7233985-7234004 None:intergenic 45.0%
CTTAAGTGACAACGGGGATT+TGG + chr4_1:7233983-7234002 Msa0532710:CDS 45.0%
!! TTGGCTTTGACAGTATCTGG+AGG + chr4_1:7234002-7234021 Msa0532710:CDS 45.0%
!! TGGCTTTGACAGTATCTGGA+GGG + chr4_1:7234003-7234022 Msa0532710:CDS 45.0%
ACAGTATCTGGAGGGGAAAA+TGG + chr4_1:7234011-7234030 Msa0532710:CDS 45.0%
CAATCTCTACATGCCATGTC+AGG + chr4_1:7234083-7234102 Msa0532710:CDS 45.0%
AACTAGAAGCCGGAGTTGTT+CGG + chr4_1:7234136-7234155 Msa0532710:CDS 45.0%
TCTCCATTTCTCCTGTCTCA+GGG - chr4_1:7234181-7234200 None:intergenic 45.0%
GGGTTTGAAAAAGGATTCCC+TGG + chr4_1:7234215-7234234 Msa0532710:CDS 45.0%
! CATAAACCATCTGGTCTTCC+AGG - chr4_1:7234236-7234255 None:intergenic 45.0%
CTGGAAGACCAGATGGTTTA+TGG + chr4_1:7234234-7234253 Msa0532710:CDS 45.0%
TTCTATTGGAAGTCCGTCAG+TGG + chr4_1:7234319-7234338 Msa0532710:CDS 45.0%
ATCTCAAGCTGTTGCCTCTA+AGG - chr4_1:7234349-7234368 None:intergenic 45.0%
! CTTGAGATCATCTGGTGATG+AGG + chr4_1:7234361-7234380 Msa0532710:CDS 45.0%
!! AAAGCAGCTTGTTGATGGTC+AGG + chr4_1:7234445-7234464 Msa0532710:CDS 45.0%
ATCGTATCTGTGTCCGTACT+AGG + chr4_1:7234747-7234766 Msa0532710:intron 45.0%
! CTTTTCTGAATTGCAGGGTC+GGG + chr4_1:7234896-7234915 Msa0532710:intron 45.0%
GGGAGACAGATAGAAAACTG+AGG + chr4_1:7234916-7234935 Msa0532710:CDS 45.0%
!! TGTAGGTGTTGATCCAATGC+AGG + chr4_1:7234950-7234969 Msa0532710:CDS 45.0%
AACTGCAGAGACCAGTCTAA+AGG - chr4_1:7234990-7235009 None:intergenic 45.0%
GCTATGTACCATTAACCCAC+AGG + chr4_1:7235051-7235070 Msa0532710:CDS 45.0%
! AAGTAGGTCCTGTGGGTTAA+TGG - chr4_1:7235062-7235081 None:intergenic 45.0%
! CTAGTGAGGTTTTCAGAGCA+GGG + chr4_1:7235527-7235546 Msa0532710:CDS 45.0%
TAACACGGCGAAGCTATTCA+TGG + chr4_1:7235594-7235613 Msa0532710:CDS 45.0%
! TCATTAGGAGTGTGTACAGC+AGG + chr4_1:7235694-7235713 Msa0532710:three_prime_UTR 45.0%
! CATTAGGAGTGTGTACAGCA+GGG + chr4_1:7235695-7235714 Msa0532710:three_prime_UTR 45.0%
AGACAGTCAAATTCGCCATC+TGG - chr4_1:7235916-7235935 None:intergenic 45.0%
! TCAGTGTCCTGTTGGTGTCT+GGG - chr4_1:7229987-7230006 None:intergenic 50.0%
! GCATTGTTTAAGGTGGTCGC+TGG + chr4_1:7230128-7230147 Msa0532710:intron 50.0%
TTTCGCGAGTAAGTTCGGTC+GGG - chr4_1:7231109-7231128 None:intergenic 50.0%
CTTTCGCGAGTAAGTTCGGT+CGG - chr4_1:7231110-7231129 None:intergenic 50.0%
! GGTGGCAGACAGAGTATTTC+GGG + chr4_1:7231472-7231491 Msa0532710:intron 50.0%
! GTGGCAGACAGAGTATTTCG+GGG + chr4_1:7231473-7231492 Msa0532710:intron 50.0%
ATCGCTCTTTCAGTAGTCGG+TGG + chr4_1:7231539-7231558 Msa0532710:CDS 50.0%
GCATATGGGCAAACAAGCAG+TGG + chr4_1:7231666-7231685 Msa0532710:CDS 50.0%
! GCACTGACAACACTCCACTT+AGG + chr4_1:7231958-7231977 Msa0532710:CDS 50.0%
GGATCATCACGCAACCTAAG+TGG - chr4_1:7231975-7231994 None:intergenic 50.0%
TAGGTTGCGTGATGATCCTG+AGG + chr4_1:7231977-7231996 Msa0532710:CDS 50.0%
CAGAGGAGACTCTACAGGAT+TGG + chr4_1:7232125-7232144 Msa0532710:CDS 50.0%
GAGGAGACTCTACAGGATTG+GGG + chr4_1:7232127-7232146 Msa0532710:CDS 50.0%
AGGAGACTCTACAGGATTGG+GGG + chr4_1:7232128-7232147 Msa0532710:CDS 50.0%
CTTGCAGCTCAGAGACAAGT+AGG + chr4_1:7232440-7232459 Msa0532710:intron 50.0%
TCCTTTGCCCAGAAATTCCC+TGG - chr4_1:7232616-7232635 None:intergenic 50.0%
GCATCTCAGGTATCATCAGC+TGG + chr4_1:7232804-7232823 Msa0532710:CDS 50.0%
GCTGGGGTGAGATTGAAAGA+AGG + chr4_1:7232822-7232841 Msa0532710:CDS 50.0%
CGACTGTCATTCGTAAGCTG+AGG + chr4_1:7232877-7232896 Msa0532710:CDS 50.0%
GAGGTTGTTCACTTCACCCT+CGG + chr4_1:7232896-7232915 Msa0532710:intron 50.0%
ATACTGCAGCCTTGCTTAGG+TGG + chr4_1:7233040-7233059 Msa0532710:CDS 50.0%
CTAGCATTGCCACCTAAGCA+AGG - chr4_1:7233052-7233071 None:intergenic 50.0%
TTTGCACTTTGAGCCCTGCA+CGG + chr4_1:7233083-7233102 Msa0532710:CDS 50.0%
GTTCAACATGACTCCGTGCA+GGG - chr4_1:7233099-7233118 None:intergenic 50.0%
TGTTCAACATGACTCCGTGC+AGG - chr4_1:7233100-7233119 None:intergenic 50.0%
GCAAAAAGAGTTGGCCAGGT+TGG + chr4_1:7233219-7233238 Msa0532710:CDS 50.0%
! AAAGAGTTGGCCAGGTTGGA+AGG + chr4_1:7233223-7233242 Msa0532710:CDS 50.0%
!! GATTGAGGATTTGCTGCGCA+TGG + chr4_1:7233478-7233497 Msa0532710:CDS 50.0%
GTTGGGACCACAAATGCTTG+AGG - chr4_1:7233692-7233711 None:intergenic 50.0%
TCCGTCCTTAAGTGACAACG+GGG + chr4_1:7233977-7233996 Msa0532710:CDS 50.0%
! TCCCCGTTGTCACTTAAGGA+CGG - chr4_1:7233981-7234000 None:intergenic 50.0%
! GGCTTTGACAGTATCTGGAG+GGG + chr4_1:7234004-7234023 Msa0532710:CDS 50.0%
AGGGGAAAATGGAACAAGCC+AGG + chr4_1:7234022-7234041 Msa0532710:CDS 50.0%
TGTGATGCTCCGAACAACTC+CGG - chr4_1:7234148-7234167 None:intergenic 50.0%
TTCCCCTGAGACAGGAGAAA+TGG + chr4_1:7234175-7234194 Msa0532710:CDS 50.0%
CTCCATTTCTCCTGTCTCAG+GGG - chr4_1:7234180-7234199 None:intergenic 50.0%
CTCTCCATTTCTCCTGTCTC+AGG - chr4_1:7234182-7234201 None:intergenic 50.0%
CTGAGACAGGAGAAATGGAG+AGG + chr4_1:7234180-7234199 Msa0532710:CDS 50.0%
ATGGAGAGGACGCCATTCAA+TGG + chr4_1:7234194-7234213 Msa0532710:CDS 50.0%
TGGAGAGGACGCCATTCAAT+GGG + chr4_1:7234195-7234214 Msa0532710:CDS 50.0%
!! CCTCTAAGGTCATCCACTGA+CGG - chr4_1:7234335-7234354 None:intergenic 50.0%
GGCAACAGCTTGAGATCATC+TGG + chr4_1:7234353-7234372 Msa0532710:CDS 50.0%
! GAAACCCAGGGTACCTAGTA+CGG - chr4_1:7234763-7234782 None:intergenic 50.0%
!! AGGTGTTGATCCAATGCAGG+AGG + chr4_1:7234953-7234972 Msa0532710:CDS 50.0%
CACCAGGAACTCCTTTAGAC+TGG + chr4_1:7234976-7234995 Msa0532710:CDS 50.0%
GACCAGTCTAAAGGAGTTCC+TGG - chr4_1:7234981-7235000 None:intergenic 50.0%
! ACTGGTCTCTGCAGTTCAAG+AGG + chr4_1:7234994-7235013 Msa0532710:CDS 50.0%
TCTGGCTGTCTTTCTCAGAC+TGG - chr4_1:7235181-7235200 None:intergenic 50.0%
GACACAGTGTGAGAGCTCTT+CGG + chr4_1:7235321-7235340 Msa0532710:intron 50.0%
TATGCGGAAGAGGCTTTCTG+AGG + chr4_1:7235370-7235389 Msa0532710:CDS 50.0%
! AGAGGCTTTCTGAGGAAGAG+AGG + chr4_1:7235378-7235397 Msa0532710:CDS 50.0%
TGCAGCTAGCAGACCGTTTA+TGG + chr4_1:7235453-7235472 Msa0532710:CDS 50.0%
TTGCAGCACTCTGCATTACG+TGG - chr4_1:7235496-7235515 None:intergenic 50.0%
!! AGAGTGCTGCAATAGTTGCG+AGG + chr4_1:7235504-7235523 Msa0532710:CDS 50.0%
CAATAGTTGCGAGGCTAGTG+AGG + chr4_1:7235513-7235532 Msa0532710:CDS 50.0%
! GCTAGTGAGGTTTTCAGAGC+AGG + chr4_1:7235526-7235545 Msa0532710:CDS 50.0%
GCTTCACACCTCAGCTAACA+CGG + chr4_1:7235579-7235598 Msa0532710:CDS 50.0%
ACGATGTCCCAGACACCAAC+AGG + chr4_1:7229977-7229996 Msa0532710:five_prime_UTR 55.0%
! GTCAGTGTCCTGTTGGTGTC+TGG - chr4_1:7229988-7230007 None:intergenic 55.0%
CGAGTAAGTTCGGTCGGGTT+TGG - chr4_1:7231104-7231123 None:intergenic 55.0%
GGGTGACTGTGAAACGAAGC+AGG + chr4_1:7231493-7231512 Msa0532710:CDS 55.0%
GCGCTATAGCGCTGCAGAAT+TGG + chr4_1:7232263-7232282 Msa0532710:intron 55.0%
! GCCAGGGAATTTCTGGGCAA+AGG + chr4_1:7232612-7232631 Msa0532710:CDS 55.0%
CGCATACTGCAGCCTTGCTT+AGG + chr4_1:7233037-7233056 Msa0532710:CDS 55.0%
!! TGAGGATTTGCTGCGCATGG+TGG + chr4_1:7233481-7233500 Msa0532710:CDS 55.0%
!! GAGGATTTGCTGCGCATGGT+GGG + chr4_1:7233482-7233501 Msa0532710:CDS 55.0%
!! AGGATTTGCTGCGCATGGTG+GGG + chr4_1:7233483-7233502 Msa0532710:CDS 55.0%
ATGACTGCTTCCCCTGAGAC+AGG + chr4_1:7234167-7234186 Msa0532710:CDS 55.0%
GGATTCCCTGGAAGACCAGA+TGG + chr4_1:7234227-7234246 Msa0532710:CDS 55.0%
CCGTCAGTGGATGACCTTAG+AGG + chr4_1:7234332-7234351 Msa0532710:CDS 55.0%
TGTGTCCGTACTAGGTACCC+TGG + chr4_1:7234755-7234774 Msa0532710:intron 55.0%
GTGTCCGTACTAGGTACCCT+GGG + chr4_1:7234756-7234775 Msa0532710:intron 55.0%
ACAGTGTGAGAGCTCTTCGG+CGG + chr4_1:7235324-7235343 Msa0532710:intron 55.0%
CGAGCCCTCAAGGAGATGTT+TGG + chr4_1:7235551-7235570 Msa0532710:CDS 55.0%
TAGCTTCGCCGTGTTAGCTG+AGG - chr4_1:7235590-7235609 None:intergenic 55.0%
! TTTGCTGCGCATGGTGGGGA+AGG + chr4_1:7233487-7233506 Msa0532710:CDS 60.0%
!! GATCCAATGCAGGAGGCACC+AGG + chr4_1:7234960-7234979 Msa0532710:CDS 60.0%
GTTCCTGGTGCCTCCTGCAT+TGG - chr4_1:7234966-7234985 None:intergenic 60.0%
CAGTGTGAGAGCTCTTCGGC+GGG + chr4_1:7235325-7235344 Msa0532710:intron 60.0%
AGGGAGCGAGCGTGCATCTC+AGG + chr4_1:7232791-7232810 Msa0532710:CDS 65.0%
AGAGCAGGGACGAGCCCTCA+AGG + chr4_1:7235541-7235560 Msa0532710:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 7229676 7236072 7229676 ID=Msa0532710;Name=Msa0532710
chr4_1 mRNA 7229676 7236072 7229676 ID=Msa0532710-mRNA-1;Parent=Msa0532710;Name=Msa0532710-mRNA-1;_AED=0.09;_eAED=0.09;_QI=474|1|1|1|0.92|0.86|15|429|873
chr4_1 exon 7229676 7230074 7229676 ID=Msa0532710-mRNA-1:exon:2481;Parent=Msa0532710-mRNA-1
chr4_1 exon 7230686 7230980 7230686 ID=Msa0532710-mRNA-1:exon:2482;Parent=Msa0532710-mRNA-1
chr4_1 exon 7231480 7231569 7231480 ID=Msa0532710-mRNA-1:exon:2483;Parent=Msa0532710-mRNA-1
chr4_1 exon 7231655 7231755 7231655 ID=Msa0532710-mRNA-1:exon:2484;Parent=Msa0532710-mRNA-1
chr4_1 exon 7231885 7231998 7231885 ID=Msa0532710-mRNA-1:exon:2485;Parent=Msa0532710-mRNA-1
chr4_1 exon 7232100 7232181 7232100 ID=Msa0532710-mRNA-1:exon:2486;Parent=Msa0532710-mRNA-1
chr4_1 exon 7232447 7232514 7232447 ID=Msa0532710-mRNA-1:exon:2487;Parent=Msa0532710-mRNA-1
chr4_1 exon 7232597 7232662 7232597 ID=Msa0532710-mRNA-1:exon:2488;Parent=Msa0532710-mRNA-1
chr4_1 exon 7232774 7232898 7232774 ID=Msa0532710-mRNA-1:exon:2489;Parent=Msa0532710-mRNA-1
chr4_1 exon 7232991 7233321 7232991 ID=Msa0532710-mRNA-1:exon:2490;Parent=Msa0532710-mRNA-1
chr4_1 exon 7233425 7233526 7233425 ID=Msa0532710-mRNA-1:exon:2491;Parent=Msa0532710-mRNA-1
chr4_1 exon 7233649 7233775 7233649 ID=Msa0532710-mRNA-1:exon:2492;Parent=Msa0532710-mRNA-1
chr4_1 exon 7233895 7234466 7233895 ID=Msa0532710-mRNA-1:exon:2493;Parent=Msa0532710-mRNA-1
chr4_1 exon 7234912 7235219 7234912 ID=Msa0532710-mRNA-1:exon:2494;Parent=Msa0532710-mRNA-1
chr4_1 exon 7235328 7236072 7235328 ID=Msa0532710-mRNA-1:exon:2495;Parent=Msa0532710-mRNA-1
chr4_1 five_prime_UTR 7229676 7230074 7229676 ID=Msa0532710-mRNA-1:five_prime_utr;Parent=Msa0532710-mRNA-1
chr4_1 five_prime_UTR 7230686 7230760 7230686 ID=Msa0532710-mRNA-1:five_prime_utr;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7230761 7230980 7230761 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7231480 7231569 7231480 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7231655 7231755 7231655 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7231885 7231998 7231885 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7232100 7232181 7232100 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7232447 7232514 7232447 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7232597 7232662 7232597 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7232774 7232898 7232774 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7232991 7233321 7232991 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7233425 7233526 7233425 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7233649 7233775 7233649 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7233895 7234466 7233895 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7234912 7235219 7234912 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 CDS 7235328 7235643 7235328 ID=Msa0532710-mRNA-1:cds;Parent=Msa0532710-mRNA-1
chr4_1 three_prime_UTR 7235644 7236072 7235644 ID=Msa0532710-mRNA-1:three_prime_utr;Parent=Msa0532710-mRNA-1
Gene Sequence

>Msa0532710

ATGGGAGCTATTGCTGGAGAAGAGTTGTCGAAATGGGAGAAGATGAATGGAGTTAGTGGTTGTGAAGAGAAGATTCTTGTGTTACTTAGGCTTAGGCCTTTGAATGAGAAGGAAATTTCTGCTAATGAATCTGCAGATTGGGAATGTATTAATGATACTACGATTTTGTACCGGAATACATTGCGTGAAGGTTCTACGTTTCCAAGTGCCTACACATTTGACAGAGTATTTCGGGGTGACTGTGAAACGAAGCAGGTATATGAGGAAGGAGCTAGGGAAATCGCTCTTTCAGTAGTCGGTGGAATTAACTCGAGTATTTTTGCATATGGGCAAACAAGCAGTGGAAAGACATATACTATGGTCGGAATAACTGAATTTGCTGTAGCAGATATTTTTGACTACGCAAAAAGGCATGAAGAAAGAGCATTTGCATTGAAGTTCTCAGCAATTGAGATTTACAATGAAATTGTTAGAGATCTTCTCAGCACTGACAACACTCCACTTAGGTTGCGTGATGATCCTGAGAGAGGACCCGTTCTAGAGAAACTTACAGAGGAGACTCTACAGGATTGGGGGCATTTTCAAGAGCTCCTATCCTTTTGTGAAGCTCAGAGACAAGTAGGAGAGACATACCTGAATGAAAAGAGTTCAAGATCTCACCAAATTATCAGATTGACCATTGAAAGTTCTGCCAGGGAATTTCTGGGCAAAGGAAACTCAACCACCCTATCTGCTAGTGTAAATTTTGTTGATTTGGCAGGGAGCGAGCGTGCATCTCAGGTATCATCAGCTGGGGTGAGATTGAAAGAAGGTTGCCATATAAACCGGAGTTTACTTACTCTTTCGACTGTCATTCGTAAGCTGAGTAAGGGAAGACATGGACACATCAATTACAGAGATTCTAAGTTGACACGCATACTGCAGCCTTGCTTAGGTGGCAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGGAGTCATGTTGAACAAACTAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTTACCACTAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAATTGCAAAAAGAGTTGGCCAGGTTGGAAGGCGAGTTAAAAACTCCTGCTACCTCCAACACTGATTATGTAGCTTTGTTGAGAAAGAAAGATCAACAGATAGAAAAGATGGATAAGGAAATTAAGGAGCTAACTAAGCAACGTGATCTTGCTGAATCAAGGATTGAGGATTTGCTGCGCATGGTGGGGAAGGATCAGATATCTAAAAAGGAAGAAGATTTATGGGAAGATGACTGTTCAGTATCAGAGTCCTCAAGCATTTGTGGTCCCAACATACGCATTAGAGAGTTCAACAATCCTCAATATAATAGTGGAGACAGTGGAAGTATTCAAGATGAAGAAGACCTTGATGAATACTGCAAAGAAGTTCGATGTGTCGAGTTGGAAGAGTCAAGTAGAGACAACTCAGAATTACTTGATCCGTCCTTAAGTGACAACGGGGATTTGGCTTTGACAGTATCTGGAGGGGAAAATGGAACAAGCCAGGAAATGTCTACACATTTGAATGAAGACAGCCATGATGAACAATCTCTACATGCCATGTCAGGAAACATGTCAAATTATAGAAATCACAAATTAACTAGAAGCCGGAGTTGTTCGGAGCATCACATGACTGCTTCCCCTGAGACAGGAGAAATGGAGAGGACGCCATTCAATGGGTTTGAAAAAGGATTCCCTGGAAGACCAGATGGTTTATGGAGAAAGTTCAATCCATTAAATTTAGATGGTTCAACAAGATTTTCAAGGAACGATTCTCAGTCTTCTATTGGAAGTCCGTCAGTGGATGACCTTAGAGGCAACAGCTTGAGATCATCTGGTGATGAGGACATTACTAGCATCCATACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACTTGAATATGAAAAGCAGCTTGTTGATGGTCAGGGTCGGGAGACAGATAGAAAACTGAGGAATGTGAAAGATGTAGGTGTTGATCCAATGCAGGAGGCACCAGGAACTCCTTTAGACTGGTCTCTGCAGTTCAAGAGGCAGCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTATGTACCATTAACCCACAGGACCTACTTCTTTCTTTTGTTTAGGGGTGAACAAACAGATTCCATTTACATGGAGGTAGAGCTTAGAAGACTATGCTTCCTGAAAGAAACATTTTTTGATGAAAACCAGTCTGAGAAAGACAGCCAGACAATCACGTTAACTTCAAGTGTGAGAGCTCTTCGGCGGGAGAAAGAAATGCTTATGAAGCTTATGCGGAAGAGGCTTTCTGAGGAAGAGAGGAAAAGGCTATTTAACGAATGGGGCATTGGATTGAATTCAAAGCGCAGGAGAATGCAGCTAGCAGACCGTTTATGGTGCAACACTGATATGAACCACGTAATGCAGAGTGCTGCAATAGTTGCGAGGCTAGTGAGGTTTTCAGAGCAGGGACGAGCCCTCAAGGAGATGTTTGGACTTAGCTTCACACCTCAGCTAACACGGCGAAGCTATTCATGGAAAAGTTCAAGAGCATCTCTTCCTTAG
Protein sequence

>Msa0532710

MGAIAGEELSKWEKMNGVSGCEEKILVLLRLRPLNEKEISANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCETKQVYEEGAREIALSVVGGINSSIFAYGQTSSGKTYTMVGITEFAVADIFDYAKRHEERAFALKFSAIEIYNEIVRDLLSTDNTPLRLRDDPERGPVLEKLTEETLQDWGHFQELLSFCEAQRQVGETYLNEKSSRSHQIIRLTIESSAREFLGKGNSTTLSASVNFVDLAGSERASQVSSAGVRLKEGCHINRSLLTLSTVIRKLSKGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKELARLEGELKTPATSNTDYVALLRKKDQQIEKMDKEIKELTKQRDLAESRIEDLLRMVGKDQISKKEEDLWEDDCSVSESSSICGPNIRIREFNNPQYNSGDSGSIQDEEDLDEYCKEVRCVELEESSRDNSELLDPSLSDNGDLALTVSGGENGTSQEMSTHLNEDSHDEQSLHAMSGNMSNYRNHKLTRSRSCSEHHMTASPETGEMERTPFNGFEKGFPGRPDGLWRKFNPLNLDGSTRFSRNDSQSSIGSPSVDDLRGNSLRSSGDEDITSIHTFVAGMKEMVKLEYEKQLVDGQGRETDRKLRNVKDVGVDPMQEAPGTPLDWSLQFKRQQKEIIELWQSCYVPLTHRTYFFLLFRGEQTDSIYMEVELRRLCFLKETFFDENQSEKDSQTITLTSSVRALRREKEMLMKLMRKRLSEEERKRLFNEWGIGLNSKRRRMQLADRLWCNTDMNHVMQSAAIVARLVRFSEQGRALKEMFGLSFTPQLTRRSYSWKSSRASLP*