AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0308830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0308830 MtrunA17_Chr2g0289421 91.558 462 5 1 1 462 1 428 0.0 840
Msa0308830 MtrunA17_Chr4g0000411 46.035 517 185 9 1 462 1 478 1.29e-149 434
Msa0308830 MtrunA17_Chr4g0002141 44.078 515 156 11 1 462 1 436 3.04e-131 386
Msa0308830 MtrunA17_Chr4g0051481 69.159 107 33 0 328 434 18 124 4.81e-49 164
Msa0308830 MtrunA17_Chr7g0226401 49.398 83 41 1 7 88 5 87 3.07e-14 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0308830 AT4G22290.1 59.146 492 124 10 1 462 1 445 0.0 530
Msa0308830 AT1G16860.1 46.562 509 190 9 1 462 1 474 9.80e-145 422
Msa0308830 AT1G78880.1 47.036 506 186 10 1 462 1 468 6.85e-144 420

Find 202 sgRNAs with CRISPR-Local

Find 407 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTTCCACACACGTTTC+TGG 0.176634 2_4:-3245151 Msa0308830:three_prime_UTR
CGGCAATGACATCGGCATTT+TGG 0.212188 2_4:+3245278 None:intergenic
TGTCGGTGGTTGCCGTTCTT+TGG 0.249816 2_4:+3249903 None:intergenic
TCGATGGGGAAAGCGGTTTA+TGG 0.253416 2_4:-3249562 Msa0308830:CDS
GGTTTCTAGGTCGGTGGTTT+GGG 0.257942 2_4:-3249494 Msa0308830:CDS
CAAGTGGTATTCTGATTATT+AGG 0.265880 2_4:+3245100 None:intergenic
TGATTATTTGGAATTGTGTT+TGG 0.274974 2_4:-3249357 Msa0308830:CDS
AGCGAGATCCAGACCGAATT+CGG 0.289618 2_4:-3249746 Msa0308830:CDS
GAAGAAGATGGATGCGATTT+CGG 0.293347 2_4:+3249793 None:intergenic
AAGAAGTGAAAGTTGGGTTT+AGG 0.305301 2_4:-3249516 Msa0308830:CDS
CGGAGACATGTTGGCCAGTT+TGG 0.309647 2_4:-3247189 Msa0308830:intron
GGGTTTCTAGGTCGGTGGTT+TGG 0.310114 2_4:-3249495 Msa0308830:CDS
GGTCAGTATGTTAAGGTTAC+TGG 0.311256 2_4:-3249268 Msa0308830:CDS
CCAAGCTCACCGGATTTCTT+CGG 0.314714 2_4:+3249844 None:intergenic
TATTATCGTGCTAACATTGA+TGG 0.317971 2_4:+3244794 None:intergenic
AGAAGTGAAAGTTGGGTTTA+GGG 0.319462 2_4:-3249515 Msa0308830:CDS
ATACACATCTAGGTATTCTT+TGG 0.327442 2_4:+3247542 None:intergenic
GCAAGCCAGCCTAGGAAGTT+TGG 0.331249 2_4:+3246115 None:intergenic
CGGTGGGATCCGGTCCGGTT+GGG 0.331675 2_4:-3249621 Msa0308830:CDS
AATGCTAGATATTCCTGTTC+TGG 0.338362 2_4:-3249818 Msa0308830:CDS
GATTATTTGGAATTGTGTTT+GGG 0.341432 2_4:-3249356 Msa0308830:CDS
TGCCGTTCTTTGGGTTGTTC+TGG 0.342459 2_4:+3249913 None:intergenic
TGGTGTTATTGTTCCTGTTT+TGG 0.346552 2_4:-3249383 Msa0308830:CDS
CAAGCTCACCGGATTTCTTC+GGG 0.353309 2_4:+3249845 None:intergenic
AACTTGTGGCAGTATTCCTT+TGG 0.359019 2_4:-3247575 Msa0308830:CDS
CTAAGCATCGTTGCCTCACT+TGG 0.367943 2_4:-3247465 Msa0308830:CDS
TAATTACTTTGGACCCCTTT+GGG 0.369705 2_4:+3244954 None:intergenic
CTAAGCTTTCAAAGTTTCAA+TGG 0.369940 2_4:-3249989 Msa0308830:exon
GTCGGTGGTTGCCGTTCTTT+GGG 0.370492 2_4:+3249904 None:intergenic
TTCTCAAACTGCTTTCAGTT+TGG 0.370996 2_4:+3245049 None:intergenic
GGGTCGGCAGTGACGAGTTT+GGG 0.373899 2_4:-3249541 Msa0308830:CDS
TCTTCTTCTCAACTTAGCAC+TGG 0.376466 2_4:-3249772 Msa0308830:CDS
ATAATTACTTTGGACCCCTT+TGG 0.382482 2_4:+3244953 None:intergenic
GTTGCAATGTGTTTGCTTGT+TGG 0.383661 2_4:-3249457 Msa0308830:CDS
TTCCCCACCTGACCCGAATT+CGG 0.386954 2_4:+3249733 None:intergenic
GAAGATGATGAAAGTTTGTA+TGG 0.387276 2_4:+3250011 None:intergenic
TCAGAATTATATGAATATAA+AGG 0.387973 2_4:-3247511 Msa0308830:CDS
TGGGTCGGCAGTGACGAGTT+TGG 0.390298 2_4:-3249542 Msa0308830:CDS
GGCAGCACAGTAAGTGTTAT+GGG 0.391568 2_4:-3245430 Msa0308830:CDS
TAAGCTTTCAAAGTTTCAAT+GGG 0.394094 2_4:-3249988 Msa0308830:exon
TATCCTGATGCTGAACTTAG+AGG 0.397526 2_4:-3249301 Msa0308830:CDS
GTCTCCGCCATATCTGAGTA+TGG 0.400873 2_4:+3247205 None:intergenic
CAGGTGGGGAAGAATCTTAC+TGG 0.401286 2_4:-3249721 Msa0308830:CDS
AGGCAGCACAGTAAGTGTTA+TGG 0.401694 2_4:-3245431 Msa0308830:CDS
ATTATATGAATATAAAGGTT+GGG 0.403002 2_4:-3247506 Msa0308830:CDS
CAAATAATCAAAACCAAAAC+AGG 0.406223 2_4:+3249370 None:intergenic
GAGTAGACGGTCAGGGCAGC+TGG 0.413925 2_4:-3249596 Msa0308830:CDS
TTGGGTGAAGAAGTGAAAGT+TGG 0.415627 2_4:-3249523 Msa0308830:CDS
ACATAAGAAAATAATTACTT+TGG 0.420871 2_4:+3244943 None:intergenic
CACGGCGCCATACTCAGATA+TGG 0.422125 2_4:-3247212 Msa0308830:CDS
GGTGGGATCCGGTCCGGTTG+GGG 0.425096 2_4:-3249620 Msa0308830:CDS
CTAATGCTCTTAACCCGGTC+TGG 0.428016 2_4:+3246224 None:intergenic
AAGTTGGGTTTAGGGTTTCT+AGG 0.431178 2_4:-3249507 Msa0308830:CDS
CTTCCTTGAGGCGCATTATC+CGG 0.433054 2_4:+3246068 None:intergenic
AAATATTAATTGTCAAGGCT+TGG 0.435019 2_4:-3244883 Msa0308830:three_prime_UTR
CTTCTTCTCAACTTAGCACT+GGG 0.435293 2_4:-3249771 Msa0308830:CDS
TTCGGGTCACCACCGGTGTA+TGG 0.435517 2_4:+3249862 None:intergenic
TGGGTGAAGAAGTGAAAGTT+GGG 0.435766 2_4:-3249522 Msa0308830:CDS
TCGAGGAAATCAACTGGGTC+TGG 0.439998 2_4:-3249685 Msa0308830:CDS
GGCCATGGCAGCGCCACAAC+GGG 0.443189 2_4:-3247280 Msa0308830:intron
CCGGTGGGATCCGGTCCGGT+TGG 0.444972 2_4:-3249622 Msa0308830:CDS
CCAACAGAACCTGTCTCAAC+AGG 0.447785 2_4:-3245367 Msa0308830:CDS
AATTGTGTTTGGGGAAGAAA+AGG 0.448192 2_4:-3249346 Msa0308830:CDS
GCTGGAGCAAAGTGGGTCGA+TGG 0.448690 2_4:-3249578 Msa0308830:CDS
CACCTGACCCGAATTCGGTC+TGG 0.450063 2_4:+3249738 None:intergenic
TGCGATTTCGGATCCAGAAC+AGG 0.451922 2_4:+3249805 None:intergenic
CATTGATGGTCAGTATGTTA+AGG 0.452989 2_4:-3249275 Msa0308830:CDS
TAGATGTCACAACACTGAAA+TGG 0.457081 2_4:-3245217 Msa0308830:three_prime_UTR
GACCGTCTACTCGCCCCAAC+CGG 0.457930 2_4:+3249607 None:intergenic
GCTGCCATCCTTCACAAAGC+TGG 0.458452 2_4:+3247237 None:intergenic
TGGGTTTAGGGTTTCTAGGT+CGG 0.462185 2_4:-3249503 Msa0308830:CDS
GCGAGATCCAGACCGAATTC+GGG 0.462866 2_4:-3249745 Msa0308830:CDS
CTGGAGCAAAGTGGGTCGAT+GGG 0.465120 2_4:-3249577 Msa0308830:CDS
TTCCTGTAGGTTGTAACTTG+TGG 0.466004 2_4:-3247589 Msa0308830:intron
CCTTCACATCAGTTAAGTTC+CGG 0.467834 2_4:-3249955 Msa0308830:CDS
CTTCGACACCAGTCGGCAAA+AGG 0.470248 2_4:+3245326 None:intergenic
AGAAGAAGAAGAAGCTTCAC+TGG 0.470732 2_4:+3250051 None:intergenic
CAAGGAAAGATTATACTAAA+CGG 0.471748 2_4:+3245258 None:intergenic
AATTATATGAATATAAAGGT+TGG 0.475941 2_4:-3247507 Msa0308830:CDS
TAAGCATCGTTGCCTCACTT+GGG 0.476968 2_4:-3247464 Msa0308830:CDS
CTTAACATACTGACCATCAA+TGG 0.479045 2_4:+3249276 None:intergenic
TACATATCGGACTTCCAGAC+CGG 0.479218 2_4:-3246238 Msa0308830:CDS
ACAGTAGTGGGTTTCACAAA+AGG 0.480836 2_4:+3246172 None:intergenic
GATGAGACATATACACATCT+AGG 0.482174 2_4:+3247532 None:intergenic
CATAGGTAGAGGTGCCCAAA+GGG 0.482861 2_4:-3244968 Msa0308830:three_prime_UTR
GTCAGTATGTTAAGGTTACT+GGG 0.484328 2_4:-3249267 Msa0308830:CDS
CGGATAATGCGCCTCAAGGA+AGG 0.485996 2_4:-3246067 Msa0308830:CDS
CCGAAGAAATCCGGTGAGCT+TGG 0.486238 2_4:-3249844 Msa0308830:CDS
ACTTCCGGACCGGTGGGATC+CGG 0.486584 2_4:-3249631 Msa0308830:CDS
CAAGTGAGGCAACGATGCTT+AGG 0.487466 2_4:+3247466 None:intergenic
ATCCAGACCGAATTCGGGTC+AGG 0.489115 2_4:-3249740 Msa0308830:CDS
ACCGGTGTATGGTACAGAAC+GGG 0.489194 2_4:+3249873 None:intergenic
GAGTTATCTCCAAACTTCCT+AGG 0.489525 2_4:-3246124 Msa0308830:CDS
GGGAAGAATCTTACTGGGTC+GGG 0.490387 2_4:-3249715 Msa0308830:CDS
TATCTCCAAACTTCCTAGGC+TGG 0.491051 2_4:-3246120 Msa0308830:CDS
GCACCTCTAAGTTCAGCATC+AGG 0.492210 2_4:+3249298 None:intergenic
GTCCGGTTGGGGCGAGTAGA+CGG 0.494103 2_4:-3249609 Msa0308830:CDS
ACGTTGTCGAGGAAATCAAC+TGG 0.494307 2_4:-3249691 Msa0308830:CDS
GTTGGGGCGAGTAGACGGTC+AGG 0.496856 2_4:-3249604 Msa0308830:CDS
GGTGGTGACCCGAAGAAATC+CGG 0.498841 2_4:-3249853 Msa0308830:CDS
TTCACTGGATTCAGTTTCGT+GGG 0.500024 2_4:+3250066 None:intergenic
CGATGGGGAAAGCGGTTTAT+GGG 0.500311 2_4:-3249561 Msa0308830:CDS
CTTCACTGGATTCAGTTTCG+TGG 0.503028 2_4:+3250065 None:intergenic
ATCCTTCACAAAGCTGGCTA+TGG 0.503133 2_4:+3247243 None:intergenic
GTTGAGACAGGTTCTGTTGG+AGG 0.504011 2_4:+3245370 None:intergenic
CGTGGCAGACTTCTACATAT+CGG 0.505443 2_4:-3246251 Msa0308830:CDS
TTGACAAATATTAATTGTCA+AGG 0.505906 2_4:-3244888 Msa0308830:three_prime_UTR
GAACTTAGAGGTGCCATTGA+TGG 0.506450 2_4:-3249289 Msa0308830:CDS
TTTCCTTGATTTCTACTCCT+CGG 0.507506 2_4:-3245243 Msa0308830:three_prime_UTR
CACTGACAACCTGTTGAGAC+AGG 0.509024 2_4:+3245358 None:intergenic
GGAAATGACGTGTATGTCCT+TGG 0.513255 2_4:+3250087 None:intergenic
AAGTTCCGGACTCTATGTCT+CGG 0.515584 2_4:-3249941 Msa0308830:CDS
TTGATAACTTCCGGACCGGT+GGG 0.522530 2_4:-3249637 Msa0308830:CDS
CCTGTTGAGACAGGTTCTGT+TGG 0.525519 2_4:+3245367 None:intergenic
TGCCATAGCCAGCTTTGTGA+AGG 0.526503 2_4:-3247245 Msa0308830:CDS
CGGACCGGTGGGATCCGGTC+CGG 0.529410 2_4:-3249626 Msa0308830:CDS
ATTGTGTTTGGGGAAGAAAA+GGG 0.534053 2_4:-3249345 Msa0308830:CDS
TTTGATAACTTCCGGACCGG+TGG 0.537051 2_4:-3249638 Msa0308830:CDS
TTTCCGAGGAGTAGAAATCA+AGG 0.538083 2_4:+3245240 None:intergenic
CCGACCGGTTTGATAACTTC+CGG 0.539558 2_4:-3249646 Msa0308830:CDS
TGTGAAGGATGGCAGCGCCA+CGG 0.543217 2_4:-3247230 Msa0308830:CDS
AGTTCCGGACTCTATGTCTC+GGG 0.547264 2_4:-3249940 Msa0308830:CDS
CGGTTTGATAACTTCCGGAC+CGG 0.548785 2_4:-3249641 Msa0308830:CDS
TCTACTCGCCCCAACCGGAC+CGG 0.548905 2_4:+3249612 None:intergenic
CAGATATGGCGGAGACATGT+TGG 0.549325 2_4:-3247198 Msa0308830:CDS
CCGGAACTTAACTGATGTGA+AGG 0.549560 2_4:+3249955 None:intergenic
CAGGGCAGCTGGAGCAAAGT+GGG 0.553266 2_4:-3249585 Msa0308830:CDS
TTATATGAATATAAAGGTTG+GGG 0.557662 2_4:-3247505 Msa0308830:CDS
CGGACCGGATCCCACCGGTC+CGG 0.559303 2_4:+3249627 None:intergenic
CGGCCATGGCAGCGCCACAA+CGG 0.560012 2_4:-3247281 Msa0308830:intron
CGGTCCGGAAGTTATCAAAC+CGG 0.560881 2_4:+3249642 None:intergenic
TTAAGAGCATTAGTGAAAGC+AGG 0.561624 2_4:-3246214 Msa0308830:CDS
TGGTACAGGCACATCAAAGA+AGG 0.562725 2_4:-3245451 Msa0308830:intron
GGATTTCTTCGGGTCACCAC+CGG 0.564859 2_4:+3249855 None:intergenic
GCATTAGTGAAAGCAGGCTA+TGG 0.565585 2_4:-3246208 Msa0308830:CDS
GGGGAAGAATCTTACTGGGT+CGG 0.568700 2_4:-3249716 Msa0308830:CDS
ACAGAACGGGATGCCATTGT+CGG 0.569613 2_4:+3249886 None:intergenic
TGCGATCTGCAAGCCAGCCT+AGG 0.569811 2_4:+3246107 None:intergenic
AAGCATCGTTGCCTCACTTG+GGG 0.570704 2_4:-3247463 Msa0308830:CDS
TTCCAGAAACGTGTGTGGAA+AGG 0.571325 2_4:+3245149 None:intergenic
TATGAATATAAAGGTTGGGG+TGG 0.574472 2_4:-3247502 Msa0308830:CDS
TCAGGGCAGCTGGAGCAAAG+TGG 0.574842 2_4:-3249586 Msa0308830:CDS
GACCGAATTCGGGTCAGGTG+GGG 0.577015 2_4:-3249735 Msa0308830:CDS
TGTTACATCAACGACAGTAG+TGG 0.577304 2_4:+3246159 None:intergenic
CCGATAGCGTTACAGCCGAC+CGG 0.581477 2_4:-3249661 Msa0308830:CDS
TGAGCACATTCTCGTGTCGA+CGG 0.581956 2_4:+3245401 None:intergenic
TGACCGGATAATGCGCCTCA+AGG 0.583733 2_4:-3246071 Msa0308830:CDS
AGAACGGCAACCACCGACAA+TGG 0.585785 2_4:-3249899 Msa0308830:CDS
GACCAGAACAACCCAAAGAA+CGG 0.586420 2_4:-3249915 Msa0308830:CDS
CTGGGTCGGGTACGTTGTCG+AGG 0.586522 2_4:-3249702 Msa0308830:CDS
GCAAACTCTCAACTGATGAC+CGG 0.587210 2_4:-3246087 Msa0308830:CDS
GTTACATCAACGACAGTAGT+GGG 0.589878 2_4:+3246160 None:intergenic
CTCACATCATATCAATCAAG+TGG 0.590804 2_4:+3245084 None:intergenic
CTGTCTCAACAGGTTGTCAG+TGG 0.591484 2_4:-3245357 Msa0308830:CDS
ATACTAAACGGCAATGACAT+CGG 0.600201 2_4:+3245270 None:intergenic
CGTTGTCGAGGAAATCAACT+GGG 0.600957 2_4:-3249690 Msa0308830:CDS
ACTGAAATGGCACAAACCGA+TGG 0.601637 2_4:-3245204 Msa0308830:three_prime_UTR
CAGACCGAATTCGGGTCAGG+TGG 0.603031 2_4:-3249737 Msa0308830:CDS
AGACCGAATTCGGGTCAGGT+GGG 0.603260 2_4:-3249736 Msa0308830:CDS
CCGGTCGGCTGTAACGCTAT+CGG 0.604077 2_4:+3249661 None:intergenic
ATAGCCAGCTTTGTGAAGGA+TGG 0.605305 2_4:-3247241 Msa0308830:CDS
GAATTCGGTCTGGATCTCGC+TGG 0.606006 2_4:+3249748 None:intergenic
CTTTGGTAAGAAGACTCCAA+AGG 0.610655 2_4:+3247559 None:intergenic
GTTTAGGGTTTCTAGGTCGG+TGG 0.612553 2_4:-3249500 Msa0308830:CDS
GTAGCATACGAGTTCTCCAT+CGG 0.615258 2_4:+3245188 None:intergenic
ACATATCGGACTTCCAGACC+GGG 0.615927 2_4:-3246237 Msa0308830:CDS
CACCGGTGTATGGTACAGAA+CGG 0.616534 2_4:+3249872 None:intergenic
TTGGGGCGAGTAGACGGTCA+GGG 0.617172 2_4:-3249603 Msa0308830:CDS
TCGACCCGAGACATAGAGTC+CGG 0.620250 2_4:+3249936 None:intergenic
AAGTGGGTCGATGGGGAAAG+CGG 0.624665 2_4:-3249569 Msa0308830:CDS
TACTGTCGTTGATGTAACAA+AGG 0.624847 2_4:-3246155 Msa0308830:CDS
GGATAATGCGCCTCAAGGAA+GGG 0.627304 2_4:-3246066 Msa0308830:intron
TTTCACTAATGCTCTTAACC+CGG 0.627646 2_4:+3246219 None:intergenic
GAATGCTCCTTAACTGCACG+TGG 0.628407 2_4:+3244728 None:intergenic
GGGGAAAGCGGTTTATGGGT+CGG 0.632461 2_4:-3249557 Msa0308830:CDS
CGGAACTTAACTGATGTGAA+GGG 0.633874 2_4:+3249956 None:intergenic
CACTTGATTGATATGATGTG+AGG 0.639515 2_4:-3245083 Msa0308830:three_prime_UTR
TGTTGTGACATCTATTTCCG+AGG 0.639919 2_4:+3245226 None:intergenic
AGTATCTAGAACCCCAAGTG+AGG 0.641651 2_4:+3247452 None:intergenic
CCAACCGGACCGGATCCCAC+CGG 0.642340 2_4:+3249622 None:intergenic
ACATAGGTAGAGGTGCCCAA+AGG 0.642461 2_4:-3244969 Msa0308830:three_prime_UTR
TGTCTTAGAAACATGTTCCA+AGG 0.643610 2_4:-3250104 Msa0308830:five_prime_UTR
GATGGAGAACTCGTATGCTA+CGG 0.645299 2_4:-3245186 Msa0308830:three_prime_UTR
GCATCTTCCAGAAACGTGTG+TGG 0.645932 2_4:+3245144 None:intergenic
TCCCGTTCTGTACCATACAC+CGG 0.647898 2_4:-3249874 Msa0308830:CDS
ATAAGACCTTCGACACCAGT+CGG 0.649135 2_4:+3245319 None:intergenic
GAACGGGATGCCATTGTCGG+TGG 0.650114 2_4:+3249889 None:intergenic
ATTATTTGGAATTGTGTTTG+GGG 0.656892 2_4:-3249355 Msa0308830:CDS
CCGGAAGTTATCAAACCGGT+CGG 0.658156 2_4:+3249646 None:intergenic
TGGAGCAAAGTGGGTCGATG+GGG 0.662164 2_4:-3249576 Msa0308830:CDS
AGGTCTTATCATAACATGTG+AGG 0.669438 2_4:-3245305 Msa0308830:CDS
TATGATGTGAGGATTCATCA+AGG 0.670099 2_4:-3245072 Msa0308830:three_prime_UTR
AGGTGGGGAAGAATCTTACT+GGG 0.671194 2_4:-3249720 Msa0308830:CDS
TTGGGGTTCTAGATACTCTG+AGG 0.671260 2_4:-3247446 Msa0308830:intron
CATATCTGAGTATGGCGCCG+TGG 0.673150 2_4:+3247213 None:intergenic
AAGCTTTCAAAGTTTCAATG+GGG 0.680147 2_4:-3249987 Msa0308830:exon
GCAAACCATACCCTTCCTTG+AGG 0.702193 2_4:+3246056 None:intergenic
GGCGCCATACTCAGATATGG+CGG 0.706465 2_4:-3247209 Msa0308830:CDS
TCAGTATGTTAAGGTTACTG+GGG 0.715173 2_4:-3249266 Msa0308830:intron
TTTCTATAAACAGAAATACG+TGG 0.719012 2_4:-3246269 Msa0308830:intron
CGTTCTGTACCATACACCGG+TGG 0.726224 2_4:-3249871 Msa0308830:CDS
ATAGGTAGAGGTGCCCAAAG+GGG 0.751681 2_4:-3244967 Msa0308830:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATTTTTTAATGAG+AGG - chr2_4:3245953-3245972 Msa0308830:intron 10.0%
!!! TTTCTTTTTATTTTTTTTGA+GGG + chr2_4:3246640-3246659 None:intergenic 10.0%
!!! ATTTCTTTTTATTTTTTTTG+AGG + chr2_4:3246641-3246660 None:intergenic 10.0%
!!! AGGAATAATAAATAAATTTT+AGG - chr2_4:3247744-3247763 Msa0308830:intron 10.0%
!! GAAATGATAATTAAAATATT+AGG + chr2_4:3249039-3249058 None:intergenic 10.0%
!! ATGGAAAAAAAATGAATTAA+TGG + chr2_4:3245738-3245757 None:intergenic 15.0%
!! TTATTTATGAAACACTTAAA+CGG + chr2_4:3245794-3245813 None:intergenic 15.0%
!! ATTATTAATATGCTTATTGA+TGG - chr2_4:3245841-3245860 Msa0308830:intron 15.0%
!! TATTAATTTATTGTTAGGTA+TGG - chr2_4:3246016-3246035 Msa0308830:intron 15.0%
!! ATTAATTTATTGTTAGGTAT+GGG - chr2_4:3246017-3246036 Msa0308830:intron 15.0%
!! GATATATCTATATCTATTAT+TGG - chr2_4:3246227-3246246 Msa0308830:CDS 15.0%
!! TAATCATTTATTTACAAAAG+TGG - chr2_4:3246519-3246538 Msa0308830:intron 15.0%
!!! AAATATTTTGCTAAACATTA+TGG - chr2_4:3246726-3246745 Msa0308830:intron 15.0%
!! TCAGAATTATATGAATATAA+AGG - chr2_4:3247342-3247361 Msa0308830:intron 15.0%
!! AATTATATGAATATAAAGGT+TGG - chr2_4:3247346-3247365 Msa0308830:intron 15.0%
!! ATTATATGAATATAAAGGTT+GGG - chr2_4:3247347-3247366 Msa0308830:intron 15.0%
!!! TTAAAAAGCATATCTTTAAA+TGG - chr2_4:3248263-3248282 Msa0308830:intron 15.0%
!!! TTTCCTTTATATTTGTTATT+TGG - chr2_4:3249382-3249401 Msa0308830:CDS 15.0%
!! ACATAAGAAAATAATTACTT+TGG + chr2_4:3249913-3249932 None:intergenic 15.0%
!! ATTATTACATTTGTCATGTT+CGG + chr2_4:3246818-3246837 None:intergenic 20.0%
!! TAAAATAAGATTGTTCTGTT+TGG - chr2_4:3246997-3247016 Msa0308830:intron 20.0%
!! AAAATAAGATTGTTCTGTTT+GGG - chr2_4:3246998-3247017 Msa0308830:intron 20.0%
!! TTATATGAATATAAAGGTTG+GGG - chr2_4:3247348-3247367 Msa0308830:intron 20.0%
!! CTAAATATAGTCTATTGATA+AGG - chr2_4:3247940-3247959 Msa0308830:intron 20.0%
!!! TAACTATAATCTAGTGTTTT+AGG + chr2_4:3248310-3248329 None:intergenic 20.0%
!!! AATCTCTAATTGATAATCAT+GGG - chr2_4:3248362-3248381 Msa0308830:intron 20.0%
!!! AAATTTATTTTTTTTAGCGG+CGG - chr2_4:3249106-3249125 Msa0308830:intron 20.0%
!! CATTAAAATGATACAATATG+TGG - chr2_4:3249294-3249313 Msa0308830:CDS 20.0%
!! GTACCAAATAACAAATATAA+AGG + chr2_4:3249388-3249407 None:intergenic 20.0%
!!! TTATATTTGTTATTTGGTAC+AGG - chr2_4:3249388-3249407 Msa0308830:CDS 20.0%
!! TTGACAAATATTAATTGTCA+AGG - chr2_4:3249965-3249984 Msa0308830:CDS 20.0%
!!! ATTTTTACAACTACTAATAC+TGG + chr2_4:3250033-3250052 None:intergenic 20.0%
! TAAGCTTTCAAAGTTTCAAT+GGG - chr2_4:3244865-3244884 Msa0308830:three_prime_UTR 25.0%
! CAAATAATCAAAACCAAAAC+AGG + chr2_4:3245486-3245505 None:intergenic 25.0%
!!! CTGTTTTGGTTTTGATTATT+TGG - chr2_4:3245484-3245503 Msa0308830:intron 25.0%
!! TGATTATTTGGAATTGTGTT+TGG - chr2_4:3245496-3245515 Msa0308830:intron 25.0%
!! GATTATTTGGAATTGTGTTT+GGG - chr2_4:3245497-3245516 Msa0308830:intron 25.0%
!! ATTATTTGGAATTGTGTTTG+GGG - chr2_4:3245498-3245517 Msa0308830:intron 25.0%
! ACATTAACACGGATAAAAAA+TGG + chr2_4:3245757-3245776 None:intergenic 25.0%
! TTGTTTAATGTGTTTATCTG+TGG - chr2_4:3245909-3245928 Msa0308830:intron 25.0%
! TGATACTTATATATGACGAA+TGG - chr2_4:3246042-3246061 Msa0308830:intron 25.0%
! ACAGAAAACCATCAATATAT+AGG + chr2_4:3246111-3246130 None:intergenic 25.0%
!!! ATATATTGATGGTTTTCTGT+AGG - chr2_4:3246111-3246130 Msa0308830:CDS 25.0%
!!! TATATTGATGGTTTTCTGTA+GGG - chr2_4:3246112-3246131 Msa0308830:CDS 25.0%
! CTAAGCTTAAATACTGATAT+TGG + chr2_4:3246151-3246170 None:intergenic 25.0%
! AAAAGAATGATTTGAAAGGT+TGG - chr2_4:3246274-3246293 Msa0308830:intron 25.0%
!!! ACCATAATCAACACTTTTTT+TGG + chr2_4:3246335-3246354 None:intergenic 25.0%
! ATGTTTGATGTGTATTTATG+AGG - chr2_4:3246403-3246422 Msa0308830:intron 25.0%
!!! CAAGCATTTTTAGTAACAAA+AGG + chr2_4:3246494-3246513 None:intergenic 25.0%
!! TTTTACCACTTTGTGATATT+TGG - chr2_4:3246564-3246583 Msa0308830:intron 25.0%
! TTTACCACTTTGTGATATTT+GGG - chr2_4:3246565-3246584 Msa0308830:intron 25.0%
! ATGGATATATCATACTAGTA+AGG - chr2_4:3246745-3246764 Msa0308830:intron 25.0%
! AAGGTTGTTACATTCTTAAT+TGG - chr2_4:3246764-3246783 Msa0308830:intron 25.0%
! TTCTATCATACTTCCTAAAT+AGG - chr2_4:3246917-3246936 Msa0308830:intron 25.0%
! TTAGTGAAGAACAAAATGTA+AGG + chr2_4:3247087-3247106 None:intergenic 25.0%
!! TTTTTCTTATATCATGAGAC+CGG - chr2_4:3247134-3247153 Msa0308830:intron 25.0%
! TGTTAAGCACCTTAAAATTA+AGG - chr2_4:3247774-3247793 Msa0308830:intron 25.0%
!! CTAAGATGTCCTTAATTTTA+AGG + chr2_4:3247786-3247805 None:intergenic 25.0%
! TAGTAGAAACACAATTATCA+GGG + chr2_4:3247830-3247849 None:intergenic 25.0%
! ATTACAGTTTCATTCAACTT+TGG + chr2_4:3248047-3248066 None:intergenic 25.0%
! AAAGTTGAATGAAACTGTAA+TGG - chr2_4:3248046-3248065 Msa0308830:intron 25.0%
!!! ATTTTTTGCTTTCACTTCTT+AGG + chr2_4:3248223-3248242 None:intergenic 25.0%
! TTTAAATGGATCATATTGTC+AGG - chr2_4:3248277-3248296 Msa0308830:intron 25.0%
! CTAGATTATAGTTATACTTG+TGG - chr2_4:3248316-3248335 Msa0308830:intron 25.0%
!! GAATCTCTAATTGATAATCA+TGG - chr2_4:3248361-3248380 Msa0308830:intron 25.0%
! ATGCACAGTTCAAAAATATT+TGG + chr2_4:3248417-3248436 None:intergenic 25.0%
! ATAAAATTGTGATCACTATG+CGG + chr2_4:3248561-3248580 None:intergenic 25.0%
! TTTCTATAAACAGAAATACG+TGG - chr2_4:3248584-3248603 Msa0308830:intron 25.0%
!! GATTTCTGTGTTAATTTGAT+AGG - chr2_4:3248831-3248850 Msa0308830:intron 25.0%
!!! ACAGAATATTCTGAGATTTA+TGG + chr2_4:3248859-3248878 None:intergenic 25.0%
! ATAAATCTCAGAATATTCTG+TGG - chr2_4:3248858-3248877 Msa0308830:intron 25.0%
!! GTTTGAGTTAATTTGATACT+AGG - chr2_4:3248904-3248923 Msa0308830:intron 25.0%
! CTTAAGAGAGAAATAAAATG+TGG - chr2_4:3249063-3249082 Msa0308830:intron 25.0%
!! CTGTATTGACATAAAATTGA+GGG - chr2_4:3249242-3249261 Msa0308830:intron 25.0%
! CAAGGAAAGATTATACTAAA+CGG + chr2_4:3249598-3249617 None:intergenic 25.0%
!!! TCTGCTTATTTTATGTACAT+AGG - chr2_4:3249868-3249887 Msa0308830:CDS 25.0%
!! TATTTTATGTACATAGGTAG+AGG - chr2_4:3249874-3249893 Msa0308830:CDS 25.0%
! AAATATTAATTGTCAAGGCT+TGG - chr2_4:3249970-3249989 Msa0308830:CDS 25.0%
GAAGATGATGAAAGTTTGTA+TGG + chr2_4:3244845-3244864 None:intergenic 30.0%
CTAAGCTTTCAAAGTTTCAA+TGG - chr2_4:3244864-3244883 Msa0308830:three_prime_UTR 30.0%
AAGCTTTCAAAGTTTCAATG+GGG - chr2_4:3244866-3244885 Msa0308830:three_prime_UTR 30.0%
!! AATGTGATTTTGTTTGCACT+TGG - chr2_4:3245447-3245466 Msa0308830:intron 30.0%
CCATATAAGACACATTAACA+CGG + chr2_4:3245768-3245787 None:intergenic 30.0%
!! ATATTGATGGTTTTCTGTAG+GGG - chr2_4:3246113-3246132 Msa0308830:CDS 30.0%
GTGTTACAAAATGAACAACA+GGG - chr2_4:3246249-3246268 Msa0308830:CDS 30.0%
TGTTACAAAATGAACAACAG+GGG - chr2_4:3246250-3246269 Msa0308830:CDS 30.0%
GGGTAAAAGAATGATTTGAA+AGG - chr2_4:3246270-3246289 Msa0308830:intron 30.0%
! TTGGAGTTTACTTGCATTTT+GGG - chr2_4:3246293-3246312 Msa0308830:intron 30.0%
!! GCCAAAAAAAGTGTTGATTA+TGG - chr2_4:3246331-3246350 Msa0308830:intron 30.0%
! TCTCTAAGAATGTCAGAATT+TGG - chr2_4:3246458-3246477 Msa0308830:intron 30.0%
TTACCACTTTGTGATATTTG+GGG - chr2_4:3246566-3246585 Msa0308830:intron 30.0%
!!! TCACATGTTTGTTGTTTTCT+TGG - chr2_4:3246861-3246880 Msa0308830:intron 30.0%
ATCATACTTCCTAAATAGGA+TGG - chr2_4:3246921-3246940 Msa0308830:intron 30.0%
ACACGCATAAAATTCAGTAT+AGG + chr2_4:3247037-3247056 None:intergenic 30.0%
! TTTTTGTAACCTTTGCTAGT+TGG - chr2_4:3247196-3247215 Msa0308830:CDS 30.0%
! TTTTGTAACCTTTGCTAGTT+GGG - chr2_4:3247197-3247216 Msa0308830:CDS 30.0%
!!! TTTATCCTGTTTTTTCCTGT+AGG - chr2_4:3247251-3247270 Msa0308830:CDS 30.0%
ATACACATCTAGGTATTCTT+TGG + chr2_4:3247314-3247333 None:intergenic 30.0%
!! TAGTTGTTTGTTGACTCAAA+TGG - chr2_4:3247519-3247538 Msa0308830:CDS 30.0%
! TATTTCAGTGTTGTTGATTG+CGG + chr2_4:3247705-3247724 None:intergenic 30.0%
ATAGAATGACTAGATGCTTA+AGG - chr2_4:3247724-3247743 Msa0308830:intron 30.0%
ATTAAGGACATCTTAGATCT+CGG - chr2_4:3247790-3247809 Msa0308830:intron 30.0%
CTAGTAGAAACACAATTATC+AGG + chr2_4:3247831-3247850 None:intergenic 30.0%
! TGTTTTTCCATTCTTTAGCT+TGG - chr2_4:3247869-3247888 Msa0308830:intron 30.0%
!! GTTTTTCCATTCTTTAGCTT+GGG - chr2_4:3247870-3247889 Msa0308830:intron 30.0%
!!! TTTTTCCATTCTTTAGCTTG+GGG - chr2_4:3247871-3247890 Msa0308830:intron 30.0%
!!! AGTTGTGTCAATTGGTTTTA+AGG - chr2_4:3247894-3247913 Msa0308830:intron 30.0%
TATCTATAGTGAACATACAG+TGG + chr2_4:3247981-3248000 None:intergenic 30.0%
! AATGGTTGATTCCATGAAAT+AGG - chr2_4:3248064-3248083 Msa0308830:intron 30.0%
! ATGGTTGATTCCATGAAATA+GGG - chr2_4:3248065-3248084 Msa0308830:intron 30.0%
TTAGAGATTCAAATCATGTG+TGG + chr2_4:3248351-3248370 None:intergenic 30.0%
! TAAAGACGTGTACATTTTCA+TGG - chr2_4:3248438-3248457 Msa0308830:intron 30.0%
!!! GTTGCTTTTATATAGCTTCT+TGG - chr2_4:3248503-3248522 Msa0308830:intron 30.0%
AAGGCATAGTAGTTATATGA+GGG + chr2_4:3248966-3248985 None:intergenic 30.0%
! CCTCAATTTTATGTCAATAC+AGG + chr2_4:3249244-3249263 None:intergenic 30.0%
! CCTGTATTGACATAAAATTG+AGG - chr2_4:3249241-3249260 Msa0308830:intron 30.0%
CAAGTGGTATTCTGATTATT+AGG + chr2_4:3249756-3249775 None:intergenic 30.0%
AATAAAAATGCTCAACTTCG+TGG + chr2_4:3249846-3249865 None:intergenic 30.0%
TATTATCGTGCTAACATTGA+TGG + chr2_4:3250062-3250081 None:intergenic 30.0%
TGTCTTAGAAACATGTTCCA+AGG - chr2_4:3244749-3244768 Msa0308830:three_prime_UTR 35.0%
AATGCTAGATATTCCTGTTC+TGG - chr2_4:3245035-3245054 Msa0308830:three_prime_UTR 35.0%
AGTTGAGAAGAAGAAGAAGA+TGG + chr2_4:3245075-3245094 None:intergenic 35.0%
AAGAAGTGAAAGTTGGGTTT+AGG - chr2_4:3245337-3245356 Msa0308830:CDS 35.0%
AGAAGTGAAAGTTGGGTTTA+GGG - chr2_4:3245338-3245357 Msa0308830:CDS 35.0%
!!! TGGTGTTATTGTTCCTGTTT+TGG - chr2_4:3245470-3245489 Msa0308830:intron 35.0%
AATTGTGTTTGGGGAAGAAA+AGG - chr2_4:3245507-3245526 Msa0308830:intron 35.0%
ATTGTGTTTGGGGAAGAAAA+GGG - chr2_4:3245508-3245527 Msa0308830:intron 35.0%
CTTAACATACTGACCATCAA+TGG + chr2_4:3245580-3245599 None:intergenic 35.0%
! CATTGATGGTCAGTATGTTA+AGG - chr2_4:3245578-3245597 Msa0308830:intron 35.0%
GTCAGTATGTTAAGGTTACT+GGG - chr2_4:3245586-3245605 Msa0308830:intron 35.0%
TCAGTATGTTAAGGTTACTG+GGG - chr2_4:3245587-3245606 Msa0308830:intron 35.0%
CAATCTTCCATCATAAGTGT+CGG + chr2_4:3245661-3245680 None:intergenic 35.0%
! ACTTATGATGGAAGATTGGA+AGG - chr2_4:3245663-3245682 Msa0308830:intron 35.0%
TAATGGAATGTAATCACTCG+TGG + chr2_4:3245721-3245740 None:intergenic 35.0%
CCGTGTTAATGTGTCTTATA+TGG - chr2_4:3245765-3245784 Msa0308830:intron 35.0%
! GATTGCAACTACTTCTTTTG+TGG - chr2_4:3246081-3246100 Msa0308830:CDS 35.0%
GTGGTTGACCTATATATTGA+TGG - chr2_4:3246100-3246119 Msa0308830:CDS 35.0%
CATCTACAAACATCATTTGC+TGG + chr2_4:3246203-3246222 None:intergenic 35.0%
! GGTGTTACAAAATGAACAAC+AGG - chr2_4:3246248-3246267 Msa0308830:CDS 35.0%
! GTTGGAGTTTACTTGCATTT+TGG - chr2_4:3246292-3246311 Msa0308830:intron 35.0%
GATATTCACATTGCCTTCTT+GGG - chr2_4:3246541-3246560 Msa0308830:intron 35.0%
TTTCCCCAAATATCACAAAG+TGG + chr2_4:3246572-3246591 None:intergenic 35.0%
ATCAGCGACAGGAAAATATT+AGG + chr2_4:3246686-3246705 None:intergenic 35.0%
!!! TTTGTTGTTTTCTTGGACAC+TGG - chr2_4:3246868-3246887 Msa0308830:intron 35.0%
TATGTCAGACCATCCTATTT+AGG + chr2_4:3246933-3246952 None:intergenic 35.0%
TACAACCTACAGGAAAAAAC+AGG + chr2_4:3247259-3247278 None:intergenic 35.0%
GATGAGACATATACACATCT+AGG + chr2_4:3247324-3247343 None:intergenic 35.0%
TATGAATATAAAGGTTGGGG+TGG - chr2_4:3247351-3247370 Msa0308830:intron 35.0%
!! TACTCTGAGGTTAGTTTGTT+TGG - chr2_4:3247420-3247439 Msa0308830:intron 35.0%
ATAGCAGTGTTGCCAAATAT+CGG - chr2_4:3247552-3247571 Msa0308830:CDS 35.0%
TTAAGGACATCTTAGATCTC+GGG - chr2_4:3247791-3247810 Msa0308830:intron 35.0%
! TTTTTGCTGACCCTATTTCA+TGG + chr2_4:3248078-3248097 None:intergenic 35.0%
TCCTTAGGATTTGTCGAAAT+AGG + chr2_4:3248135-3248154 None:intergenic 35.0%
! TTTTGCTTTCACTTCTTAGG+TGG + chr2_4:3248220-3248239 None:intergenic 35.0%
AGATTCAAATCATGTGTGGT+AGG + chr2_4:3248347-3248366 None:intergenic 35.0%
! CAAGAATTTTCTTGTGTGGT+AGG + chr2_4:3248392-3248411 None:intergenic 35.0%
TTTAATACAAGAACCTGCTG+TGG - chr2_4:3248481-3248500 Msa0308830:intron 35.0%
TATATAAAAGCAACCACAGC+AGG + chr2_4:3248497-3248516 None:intergenic 35.0%
TTTCACTAATGCTCTTAACC+CGG + chr2_4:3248637-3248656 None:intergenic 35.0%
!! TTAAGAGCATTAGTGAAAGC+AGG - chr2_4:3248639-3248658 Msa0308830:intron 35.0%
TACTGTCGTTGATGTAACAA+AGG - chr2_4:3248698-3248717 Msa0308830:intron 35.0%
! GTATGGTTTGCATTATTCTG+TGG - chr2_4:3248809-3248828 Msa0308830:intron 35.0%
CAAGGCATAGTAGTTATATG+AGG + chr2_4:3248967-3248986 None:intergenic 35.0%
! AGGTCTTATCATAACATGTG+AGG - chr2_4:3249548-3249567 Msa0308830:CDS 35.0%
ATACTAAACGGCAATGACAT+CGG + chr2_4:3249586-3249605 None:intergenic 35.0%
TTTCCTTGATTTCTACTCCT+CGG - chr2_4:3249610-3249629 Msa0308830:CDS 35.0%
TAGATGTCACAACACTGAAA+TGG - chr2_4:3249636-3249655 Msa0308830:CDS 35.0%
CTCACATCATATCAATCAAG+TGG + chr2_4:3249772-3249791 None:intergenic 35.0%
CACTTGATTGATATGATGTG+AGG - chr2_4:3249770-3249789 Msa0308830:CDS 35.0%
TATGATGTGAGGATTCATCA+AGG - chr2_4:3249781-3249800 Msa0308830:CDS 35.0%
TTCTCAAACTGCTTTCAGTT+TGG + chr2_4:3249807-3249826 None:intergenic 35.0%
TAATTACTTTGGACCCCTTT+GGG + chr2_4:3249902-3249921 None:intergenic 35.0%
ATAATTACTTTGGACCCCTT+TGG + chr2_4:3249903-3249922 None:intergenic 35.0%
TTCACTGGATTCAGTTTCGT+GGG + chr2_4:3244790-3244809 None:intergenic 40.0%
AGAAGAAGAAGAAGCTTCAC+TGG + chr2_4:3244805-3244824 None:intergenic 40.0%
CGGAACTTAACTGATGTGAA+GGG + chr2_4:3244900-3244919 None:intergenic 40.0%
CCTTCACATCAGTTAAGTTC+CGG - chr2_4:3244898-3244917 Msa0308830:three_prime_UTR 40.0%
! TAGCATTTTACCAAGCTCAC+CGG + chr2_4:3245022-3245041 None:intergenic 40.0%
GAAGAAGATGGATGCGATTT+CGG + chr2_4:3245063-3245082 None:intergenic 40.0%
TCTTCTTCTCAACTTAGCAC+TGG - chr2_4:3245081-3245100 Msa0308830:three_prime_UTR 40.0%
CTTCTTCTCAACTTAGCACT+GGG - chr2_4:3245082-3245101 Msa0308830:three_prime_UTR 40.0%
TTGGGTGAAGAAGTGAAAGT+TGG - chr2_4:3245330-3245349 Msa0308830:CDS 40.0%
TGGGTGAAGAAGTGAAAGTT+GGG - chr2_4:3245331-3245350 Msa0308830:CDS 40.0%
! AAGTTGGGTTTAGGGTTTCT+AGG - chr2_4:3245346-3245365 Msa0308830:CDS 40.0%
GTTGCAATGTGTTTGCTTGT+TGG - chr2_4:3245396-3245415 Msa0308830:CDS 40.0%
!! GCTTGTTGGTGTGTTTTTGA+TGG - chr2_4:3245410-3245429 Msa0308830:CDS 40.0%
!! TGTTGGTGTGTTTTTGATGG+TGG - chr2_4:3245413-3245432 Msa0308830:CDS 40.0%
!! GTGATTTTGTTTGCACTTGG+TGG - chr2_4:3245450-3245469 Msa0308830:intron 40.0%
!!! GGCTTTTAGGGTTTGTGAAA+AGG - chr2_4:3245529-3245548 Msa0308830:intron 40.0%
TATCCTGATGCTGAACTTAG+AGG - chr2_4:3245552-3245571 Msa0308830:intron 40.0%
GGTCAGTATGTTAAGGTTAC+TGG - chr2_4:3245585-3245604 Msa0308830:intron 40.0%
CTTAACACCGACACTTATGA+TGG - chr2_4:3245651-3245670 Msa0308830:intron 40.0%
! CGACACTTATGATGGAAGAT+TGG - chr2_4:3245659-3245678 Msa0308830:intron 40.0%
!! GAAGATTGGAAGGCATGTTT+TGG - chr2_4:3245673-3245692 Msa0308830:intron 40.0%
! TTAATGAGAGGAGTGTGAAG+AGG - chr2_4:3245965-3245984 Msa0308830:intron 40.0%
TATGACGAATGGATCTGTCA+TGG - chr2_4:3246053-3246072 Msa0308830:intron 40.0%
TTATGGTGACCACTTGAGTT+AGG - chr2_4:3246348-3246367 Msa0308830:intron 40.0%
!! TAGGCGTGTAGATGGTTTTA+AGG - chr2_4:3246367-3246386 Msa0308830:intron 40.0%
!!! AGGCGTGTAGATGGTTTTAA+GGG - chr2_4:3246368-3246387 Msa0308830:intron 40.0%
GGATATTCACATTGCCTTCT+TGG - chr2_4:3246540-3246559 Msa0308830:intron 40.0%
CAAAGTGGTAAAACCCAAGA+AGG + chr2_4:3246557-3246576 None:intergenic 40.0%
!! TCTGTTTGGGTTGACGATAA+TGG - chr2_4:3247011-3247030 Msa0308830:intron 40.0%
GTGTTTGTCCTACGAAACAT+AGG - chr2_4:3247053-3247072 Msa0308830:intron 40.0%
AAAACGAGCCTATGTTTCGT+AGG + chr2_4:3247064-3247083 None:intergenic 40.0%
TTCTTATATCATGAGACCGG+AGG - chr2_4:3247137-3247156 Msa0308830:intron 40.0%
TCTTATATCATGAGACCGGA+GGG - chr2_4:3247138-3247157 Msa0308830:intron 40.0%
AAGATCTTCCCAACTAGCAA+AGG + chr2_4:3247208-3247227 None:intergenic 40.0%
TTTGCTAGTTGGGAAGATCT+TGG - chr2_4:3247207-3247226 Msa0308830:CDS 40.0%
TTCCTGTAGGTTGTAACTTG+TGG - chr2_4:3247264-3247283 Msa0308830:CDS 40.0%
AACTTGTGGCAGTATTCCTT+TGG - chr2_4:3247278-3247297 Msa0308830:intron 40.0%
CTTTGGTAAGAAGACTCCAA+AGG + chr2_4:3247297-3247316 None:intergenic 40.0%
! TGTGTTTCTACTAGTACTGC+AGG - chr2_4:3247837-3247856 Msa0308830:intron 40.0%
GCCTATTTCGACAAATCCTA+AGG - chr2_4:3248131-3248150 Msa0308830:intron 40.0%
TCCCATTCGTCAATGTCTTT+CGG - chr2_4:3248155-3248174 Msa0308830:intron 40.0%
ACCGAAAGACATTGACGAAT+GGG + chr2_4:3248159-3248178 None:intergenic 40.0%
ATTCGTCAATGTCTTTCGGT+GGG - chr2_4:3248159-3248178 Msa0308830:intron 40.0%
! GGCACAAGAATTTTCTTGTG+TGG + chr2_4:3248396-3248415 None:intergenic 40.0%
!! ACAGTAGTGGGTTTCACAAA+AGG + chr2_4:3248684-3248703 None:intergenic 40.0%
GTTACATCAACGACAGTAGT+GGG + chr2_4:3248696-3248715 None:intergenic 40.0%
TGTTACATCAACGACAGTAG+TGG + chr2_4:3248697-3248716 None:intergenic 40.0%
CTGTGGTCTGCATTATTCTT+TGG - chr2_4:3248875-3248894 Msa0308830:intron 40.0%
GCATAGTAGTTATATGAGGG+AGG + chr2_4:3248963-3248982 None:intergenic 40.0%
ACTATGCCTTGTAGTTCTCA+TGG - chr2_4:3248976-3248995 Msa0308830:intron 40.0%
TCTATGCCATGAGAACTACA+AGG + chr2_4:3248985-3249004 None:intergenic 40.0%
TACAATATGTGGCACACACA+TGG - chr2_4:3249305-3249324 Msa0308830:CDS 40.0%
TTTCCGAGGAGTAGAAATCA+AGG + chr2_4:3249616-3249635 None:intergenic 40.0%
TGTTGTGACATCTATTTCCG+AGG + chr2_4:3249630-3249649 None:intergenic 40.0%
GGAAATGACGTGTATGTCCT+TGG + chr2_4:3244769-3244788 None:intergenic 45.0%
CTTCACTGGATTCAGTTTCG+TGG + chr2_4:3244791-3244810 None:intergenic 45.0%
CCGGAACTTAACTGATGTGA+AGG + chr2_4:3244901-3244920 None:intergenic 45.0%
AAGTTCCGGACTCTATGTCT+CGG - chr2_4:3244912-3244931 Msa0308830:three_prime_UTR 45.0%
GACCAGAACAACCCAAAGAA+CGG - chr2_4:3244938-3244957 Msa0308830:three_prime_UTR 45.0%
AGGTGGGGAAGAATCTTACT+GGG - chr2_4:3245133-3245152 Msa0308830:three_prime_UTR 45.0%
ACGTTGTCGAGGAAATCAAC+TGG - chr2_4:3245162-3245181 Msa0308830:three_prime_UTR 45.0%
CGTTGTCGAGGAAATCAACT+GGG - chr2_4:3245163-3245182 Msa0308830:three_prime_UTR 45.0%
! TGGGTTTAGGGTTTCTAGGT+CGG - chr2_4:3245350-3245369 Msa0308830:CDS 45.0%
!! GTCGGTGGTTTGGGTTTTTA+TGG - chr2_4:3245368-3245387 Msa0308830:CDS 45.0%
!! GGTGGTTTGGGTTTTTATGG+CGG - chr2_4:3245371-3245390 Msa0308830:CDS 45.0%
! TGGGGAAGAAAAGGGCTTTT+AGG - chr2_4:3245516-3245535 Msa0308830:intron 45.0%
! GGGGAAGAAAAGGGCTTTTA+GGG - chr2_4:3245517-3245536 Msa0308830:intron 45.0%
!! GAACTTAGAGGTGCCATTGA+TGG - chr2_4:3245564-3245583 Msa0308830:intron 45.0%
ATCTACACGCCTAACTCAAG+TGG + chr2_4:3246360-3246379 None:intergenic 45.0%
ACTTGAGTTAGGCGTGTAGA+TGG - chr2_4:3246359-3246378 Msa0308830:intron 45.0%
TGCCACAAGTTACAACCTAC+AGG + chr2_4:3247269-3247288 None:intergenic 45.0%
! TAAGCATCGTTGCCTCACTT+GGG - chr2_4:3247389-3247408 Msa0308830:intron 45.0%
! AGTATCTAGAACCCCAAGTG+AGG + chr2_4:3247404-3247423 None:intergenic 45.0%
!! TTGGGGTTCTAGATACTCTG+AGG - chr2_4:3247407-3247426 Msa0308830:intron 45.0%
AGAAAGCCAAAAACCCGTTG+TGG + chr2_4:3247589-3247608 None:intergenic 45.0%
ATCCTTCACAAAGCTGGCTA+TGG + chr2_4:3247613-3247632 None:intergenic 45.0%
! ATAGCCAGCTTTGTGAAGGA+TGG - chr2_4:3247612-3247631 Msa0308830:intron 45.0%
CAACTCCCCAAGCTAAAGAA+TGG + chr2_4:3247879-3247898 None:intergenic 45.0%
CATTGACGAATGGGATCCTT+AGG + chr2_4:3248150-3248169 None:intergenic 45.0%
CACCGAAAGACATTGACGAA+TGG + chr2_4:3248160-3248179 None:intergenic 45.0%
CATTCGTCAATGTCTTTCGG+TGG - chr2_4:3248158-3248177 Msa0308830:intron 45.0%
CTTTCACTTCTTAGGTGGCT+TGG + chr2_4:3248215-3248234 None:intergenic 45.0%
CGTGGCAGACTTCTACATAT+CGG - chr2_4:3248602-3248621 Msa0308830:intron 45.0%
TACATATCGGACTTCCAGAC+CGG - chr2_4:3248615-3248634 Msa0308830:intron 45.0%
GCATTAGTGAAAGCAGGCTA+TGG - chr2_4:3248645-3248664 Msa0308830:intron 45.0%
GCAAACTCTCAACTGATGAC+CGG - chr2_4:3248766-3248785 Msa0308830:intron 45.0%
GCAACTTCTAATGTCACCTG+CGG - chr2_4:3249161-3249180 Msa0308830:intron 45.0%
TAGTGCTAATTATCAGCCGC+AGG + chr2_4:3249180-3249199 None:intergenic 45.0%
TGGTACAGGCACATCAAAGA+AGG - chr2_4:3249402-3249421 Msa0308830:CDS 45.0%
AGGCAGCACAGTAAGTGTTA+TGG - chr2_4:3249422-3249441 Msa0308830:CDS 45.0%
GGCAGCACAGTAAGTGTTAT+GGG - chr2_4:3249423-3249442 Msa0308830:CDS 45.0%
ATAAGACCTTCGACACCAGT+CGG + chr2_4:3249537-3249556 None:intergenic 45.0%
ACTGAAATGGCACAAACCGA+TGG - chr2_4:3249649-3249668 Msa0308830:CDS 45.0%
GTAGCATACGAGTTCTCCAT+CGG + chr2_4:3249668-3249687 None:intergenic 45.0%
GATGGAGAACTCGTATGCTA+CGG - chr2_4:3249667-3249686 Msa0308830:CDS 45.0%
TTCCTTTCCACACACGTTTC+TGG - chr2_4:3249702-3249721 Msa0308830:CDS 45.0%
TTCCAGAAACGTGTGTGGAA+AGG + chr2_4:3249707-3249726 None:intergenic 45.0%
!! AATAATATTAATTTATTGTT+AGG - chr2_4:3246011-3246030 Msa0308830:intron 5.0%
!! AAATGATAATTAAAATATTA+GGG + chr2_4:3249038-3249057 None:intergenic 5.0%
!!! AATAAATTTATTTTTTTTAG+CGG - chr2_4:3249103-3249122 Msa0308830:intron 5.0%
AGTTCCGGACTCTATGTCTC+GGG - chr2_4:3244913-3244932 Msa0308830:three_prime_UTR 50.0%
!! TGCCGTTCTTTGGGTTGTTC+TGG + chr2_4:3244943-3244962 None:intergenic 50.0%
ACAGAACGGGATGCCATTGT+CGG + chr2_4:3244970-3244989 None:intergenic 50.0%
TCCCGTTCTGTACCATACAC+CGG - chr2_4:3244979-3244998 Msa0308830:three_prime_UTR 50.0%
ACCGGTGTATGGTACAGAAC+GGG + chr2_4:3244983-3245002 None:intergenic 50.0%
CACCGGTGTATGGTACAGAA+CGG + chr2_4:3244984-3245003 None:intergenic 50.0%
CAAGCTCACCGGATTTCTTC+GGG + chr2_4:3245011-3245030 None:intergenic 50.0%
CCAAGCTCACCGGATTTCTT+CGG + chr2_4:3245012-3245031 None:intergenic 50.0%
TGCGATTTCGGATCCAGAAC+AGG + chr2_4:3245051-3245070 None:intergenic 50.0%
AGCGAGATCCAGACCGAATT+CGG - chr2_4:3245107-3245126 Msa0308830:three_prime_UTR 50.0%
CAGGTGGGGAAGAATCTTAC+TGG - chr2_4:3245132-3245151 Msa0308830:three_prime_UTR 50.0%
GGGGAAGAATCTTACTGGGT+CGG - chr2_4:3245137-3245156 Msa0308830:three_prime_UTR 50.0%
GGGAAGAATCTTACTGGGTC+GGG - chr2_4:3245138-3245157 Msa0308830:three_prime_UTR 50.0%
TCGAGGAAATCAACTGGGTC+TGG - chr2_4:3245168-3245187 Msa0308830:three_prime_UTR 50.0%
CCGGAAGTTATCAAACCGGT+CGG + chr2_4:3245210-3245229 None:intergenic 50.0%
!! CCGACCGGTTTGATAACTTC+CGG - chr2_4:3245207-3245226 Msa0308830:three_prime_UTR 50.0%
CGGTCCGGAAGTTATCAAAC+CGG + chr2_4:3245214-3245233 None:intergenic 50.0%
! CGGTTTGATAACTTCCGGAC+CGG - chr2_4:3245212-3245231 Msa0308830:three_prime_UTR 50.0%
! TTTGATAACTTCCGGACCGG+TGG - chr2_4:3245215-3245234 Msa0308830:three_prime_UTR 50.0%
! TTGATAACTTCCGGACCGGT+GGG - chr2_4:3245216-3245235 Msa0308830:three_prime_UTR 50.0%
TCGATGGGGAAAGCGGTTTA+TGG - chr2_4:3245291-3245310 Msa0308830:CDS 50.0%
CGATGGGGAAAGCGGTTTAT+GGG - chr2_4:3245292-3245311 Msa0308830:CDS 50.0%
! GTTTAGGGTTTCTAGGTCGG+TGG - chr2_4:3245353-3245372 Msa0308830:CDS 50.0%
! GGTTTCTAGGTCGGTGGTTT+GGG - chr2_4:3245359-3245378 Msa0308830:CDS 50.0%
!! GGTTTGGGTTTTTATGGCGG+TGG - chr2_4:3245374-3245393 Msa0308830:CDS 50.0%
GCACCTCTAAGTTCAGCATC+AGG + chr2_4:3245558-3245577 None:intergenic 50.0%
! TGAGAGGAGTGTGAAGAGGT+TGG - chr2_4:3245969-3245988 Msa0308830:intron 50.0%
TCCTGTCGCTGATAAGTAGC+AGG - chr2_4:3246693-3246712 Msa0308830:intron 50.0%
CTGATAAGTAGCAGGCTGCA+GGG - chr2_4:3246701-3246720 Msa0308830:intron 50.0%
! AGACCGGAGGGAGTAGTTTT+GGG - chr2_4:3247150-3247169 Msa0308830:intron 50.0%
CAAGTGAGGCAACGATGCTT+AGG + chr2_4:3247390-3247409 None:intergenic 50.0%
! CTAAGCATCGTTGCCTCACT+TGG - chr2_4:3247388-3247407 Msa0308830:intron 50.0%
! AAGCATCGTTGCCTCACTTG+GGG - chr2_4:3247390-3247409 Msa0308830:intron 50.0%
GTGTTGCCAAATATCGGCCA+TGG - chr2_4:3247558-3247577 Msa0308830:CDS 50.0%
! TGCCATAGCCAGCTTTGTGA+AGG - chr2_4:3247608-3247627 Msa0308830:intron 50.0%
GTCTCCGCCATATCTGAGTA+TGG + chr2_4:3247651-3247670 None:intergenic 50.0%
! CAGATATGGCGGAGACATGT+TGG - chr2_4:3247655-3247674 Msa0308830:intron 50.0%
! TGGCCAGTTTGGCGAGTTTT+TGG - chr2_4:3247675-3247694 Msa0308830:intron 50.0%
GAGCCAAAAACTCGCCAAAC+TGG + chr2_4:3247681-3247700 None:intergenic 50.0%
CTACTAGTACTGCAGGCTTG+CGG - chr2_4:3247844-3247863 Msa0308830:intron 50.0%
TACTAGTACTGCAGGCTTGC+GGG - chr2_4:3247845-3247864 Msa0308830:intron 50.0%
GCTTGGGGAGTTGTGTCAAT+TGG - chr2_4:3247886-3247905 Msa0308830:intron 50.0%
GACTCACTAGTGCAACTCAG+TGG - chr2_4:3248181-3248200 Msa0308830:intron 50.0%
!! ACTTCTTAGGTGGCTTGGTG+TGG + chr2_4:3248210-3248229 None:intergenic 50.0%
ACATATCGGACTTCCAGACC+GGG - chr2_4:3248616-3248635 Msa0308830:intron 50.0%
CTAATGCTCTTAACCCGGTC+TGG + chr2_4:3248632-3248651 None:intergenic 50.0%
CTTCCTTGAGGCGCATTATC+CGG + chr2_4:3248788-3248807 None:intergenic 50.0%
GGATAATGCGCCTCAAGGAA+GGG - chr2_4:3248787-3248806 Msa0308830:intron 50.0%
GCAAACCATACCCTTCCTTG+AGG + chr2_4:3248800-3248819 None:intergenic 50.0%
TGAGCACATTCTCGTGTCGA+CGG + chr2_4:3249455-3249474 None:intergenic 50.0%
GTTGAGACAGGTTCTGTTGG+AGG + chr2_4:3249486-3249505 None:intergenic 50.0%
CCTGTTGAGACAGGTTCTGT+TGG + chr2_4:3249489-3249508 None:intergenic 50.0%
CCAACAGAACCTGTCTCAAC+AGG - chr2_4:3249486-3249505 Msa0308830:CDS 50.0%
CACTGACAACCTGTTGAGAC+AGG + chr2_4:3249498-3249517 None:intergenic 50.0%
CTGTCTCAACAGGTTGTCAG+TGG - chr2_4:3249496-3249515 Msa0308830:CDS 50.0%
! CGGCAATGACATCGGCATTT+TGG + chr2_4:3249578-3249597 None:intergenic 50.0%
GCATCTTCCAGAAACGTGTG+TGG + chr2_4:3249712-3249731 None:intergenic 50.0%
!! ACATAGGTAGAGGTGCCCAA+AGG - chr2_4:3249884-3249903 Msa0308830:CDS 50.0%
!! CATAGGTAGAGGTGCCCAAA+GGG - chr2_4:3249885-3249904 Msa0308830:CDS 50.0%
!! ATAGGTAGAGGTGCCCAAAG+GGG - chr2_4:3249886-3249905 Msa0308830:CDS 50.0%
TCGACCCGAGACATAGAGTC+CGG + chr2_4:3244920-3244939 None:intergenic 55.0%
GTCGGTGGTTGCCGTTCTTT+GGG + chr2_4:3244952-3244971 None:intergenic 55.0%
TGTCGGTGGTTGCCGTTCTT+TGG + chr2_4:3244953-3244972 None:intergenic 55.0%
AGAACGGCAACCACCGACAA+TGG - chr2_4:3244954-3244973 Msa0308830:three_prime_UTR 55.0%
CGTTCTGTACCATACACCGG+TGG - chr2_4:3244982-3245001 Msa0308830:three_prime_UTR 55.0%
GGATTTCTTCGGGTCACCAC+CGG + chr2_4:3245001-3245020 None:intergenic 55.0%
GGTGGTGACCCGAAGAAATC+CGG - chr2_4:3245000-3245019 Msa0308830:three_prime_UTR 55.0%
CCGAAGAAATCCGGTGAGCT+TGG - chr2_4:3245009-3245028 Msa0308830:three_prime_UTR 55.0%
GAATTCGGTCTGGATCTCGC+TGG + chr2_4:3245108-3245127 None:intergenic 55.0%
GCGAGATCCAGACCGAATTC+GGG - chr2_4:3245108-3245127 Msa0308830:three_prime_UTR 55.0%
ATCCAGACCGAATTCGGGTC+AGG - chr2_4:3245113-3245132 Msa0308830:three_prime_UTR 55.0%
AGACCGAATTCGGGTCAGGT+GGG - chr2_4:3245117-3245136 Msa0308830:three_prime_UTR 55.0%
TTCCCCACCTGACCCGAATT+CGG + chr2_4:3245123-3245142 None:intergenic 55.0%
CTGGAGCAAAGTGGGTCGAT+GGG - chr2_4:3245276-3245295 Msa0308830:CDS 55.0%
TGGAGCAAAGTGGGTCGATG+GGG - chr2_4:3245277-3245296 Msa0308830:CDS 55.0%
AAGTGGGTCGATGGGGAAAG+CGG - chr2_4:3245284-3245303 Msa0308830:CDS 55.0%
GGGGAAAGCGGTTTATGGGT+CGG - chr2_4:3245296-3245315 Msa0308830:CDS 55.0%
! GGGTTTCTAGGTCGGTGGTT+TGG - chr2_4:3245358-3245377 Msa0308830:CDS 55.0%
TCACTCGTGGCAGTGTTGTG+CGG + chr2_4:3245708-3245727 None:intergenic 55.0%
! TGGTTTTCTGTAGGGGTCGC+TGG - chr2_4:3246120-3246139 Msa0308830:CDS 55.0%
! GGTTTTCTGTAGGGGTCGCT+GGG - chr2_4:3246121-3246140 Msa0308830:CDS 55.0%
! GTTTTCTGTAGGGGTCGCTG+GGG - chr2_4:3246122-3246141 Msa0308830:CDS 55.0%
! GCCTGCTACTTATCAGCGAC+AGG + chr2_4:3246697-3246716 None:intergenic 55.0%
GCTGATAAGTAGCAGGCTGC+AGG - chr2_4:3246700-3246719 Msa0308830:intron 55.0%
GGACACTGGACATGTCGTGT+CGG - chr2_4:3246882-3246901 Msa0308830:intron 55.0%
! ATGTCGTGTCGGTGCTTCAG+AGG - chr2_4:3246893-3246912 Msa0308830:intron 55.0%
! GAGACCGGAGGGAGTAGTTT+TGG - chr2_4:3247149-3247168 Msa0308830:intron 55.0%
!! GACCGGAGGGAGTAGTTTTG+GGG - chr2_4:3247151-3247170 Msa0308830:intron 55.0%
CACCCCAAAACTACTCCCTC+CGG + chr2_4:3247156-3247175 None:intergenic 55.0%
GCTGCCATCCTTCACAAAGC+TGG + chr2_4:3247619-3247638 None:intergenic 55.0%
CATATCTGAGTATGGCGCCG+TGG + chr2_4:3247643-3247662 None:intergenic 55.0%
CACGGCGCCATACTCAGATA+TGG - chr2_4:3247641-3247660 Msa0308830:intron 55.0%
GGCGCCATACTCAGATATGG+CGG - chr2_4:3247644-3247663 Msa0308830:intron 55.0%
CGGAGACATGTTGGCCAGTT+TGG - chr2_4:3247664-3247683 Msa0308830:intron 55.0%
TGACCGGATAATGCGCCTCA+AGG - chr2_4:3248782-3248801 Msa0308830:intron 55.0%
CGGATAATGCGCCTCAAGGA+AGG - chr2_4:3248786-3248805 Msa0308830:intron 55.0%
ATGCGCCTCAAGGAAGGGTA+TGG - chr2_4:3248792-3248811 Msa0308830:intron 55.0%
CTTCGACACCAGTCGGCAAA+AGG + chr2_4:3249530-3249549 None:intergenic 55.0%
!! CTTTTGCCGACTGGTGTCGA+AGG - chr2_4:3249528-3249547 Msa0308830:CDS 55.0%
GAACGGGATGCCATTGTCGG+TGG + chr2_4:3244967-3244986 None:intergenic 60.0%
TTCGGGTCACCACCGGTGTA+TGG + chr2_4:3244994-3245013 None:intergenic 60.0%
CACCTGACCCGAATTCGGTC+TGG + chr2_4:3245118-3245137 None:intergenic 60.0%
CAGACCGAATTCGGGTCAGG+TGG - chr2_4:3245116-3245135 Msa0308830:three_prime_UTR 60.0%
GACCGAATTCGGGTCAGGTG+GGG - chr2_4:3245118-3245137 Msa0308830:three_prime_UTR 60.0%
CCGGTCGGCTGTAACGCTAT+CGG + chr2_4:3245195-3245214 None:intergenic 60.0%
CCGATAGCGTTACAGCCGAC+CGG - chr2_4:3245192-3245211 Msa0308830:three_prime_UTR 60.0%
TTGGGGCGAGTAGACGGTCA+GGG - chr2_4:3245250-3245269 Msa0308830:three_prime_UTR 60.0%
TCAGGGCAGCTGGAGCAAAG+TGG - chr2_4:3245267-3245286 Msa0308830:exon 60.0%
CAGGGCAGCTGGAGCAAAGT+GGG - chr2_4:3245268-3245287 Msa0308830:exon 60.0%
GCTGGAGCAAAGTGGGTCGA+TGG - chr2_4:3245275-3245294 Msa0308830:CDS 60.0%
TGGGTCGGCAGTGACGAGTT+TGG - chr2_4:3245311-3245330 Msa0308830:CDS 60.0%
GGGTCGGCAGTGACGAGTTT+GGG - chr2_4:3245312-3245331 Msa0308830:CDS 60.0%
GTGGCAGTGTTGTGCGGTGT+CGG + chr2_4:3245702-3245721 None:intergenic 60.0%
GCGCTGCCATGGCCGATATT+TGG + chr2_4:3247567-3247586 None:intergenic 60.0%
!! GCAGCGCCACAACGGGTTTT+TGG - chr2_4:3247580-3247599 Msa0308830:CDS 60.0%
TGTGAAGGATGGCAGCGCCA+CGG - chr2_4:3247623-3247642 Msa0308830:intron 60.0%
TGCGATCTGCAAGCCAGCCT+AGG + chr2_4:3248749-3248768 None:intergenic 60.0%
! ATGCGCTGCCTTTTGCCGAC+TGG - chr2_4:3249519-3249538 Msa0308830:CDS 60.0%
CTGGGTCGGGTACGTTGTCG+AGG - chr2_4:3245151-3245170 Msa0308830:three_prime_UTR 65.0%
ACTTCCGGACCGGTGGGATC+CGG - chr2_4:3245222-3245241 Msa0308830:three_prime_UTR 65.0%
TCTACTCGCCCCAACCGGAC+CGG + chr2_4:3245244-3245263 None:intergenic 65.0%
GTCCGGTTGGGGCGAGTAGA+CGG - chr2_4:3245244-3245263 Msa0308830:three_prime_UTR 65.0%
GACCGTCTACTCGCCCCAAC+CGG + chr2_4:3245249-3245268 None:intergenic 65.0%
GTTGGGGCGAGTAGACGGTC+AGG - chr2_4:3245249-3245268 Msa0308830:three_prime_UTR 65.0%
GAGTAGACGGTCAGGGCAGC+TGG - chr2_4:3245257-3245276 Msa0308830:exon 65.0%
AACCCGTTGTGGCGCTGCCA+TGG + chr2_4:3247578-3247597 None:intergenic 65.0%
CCAACCGGACCGGATCCCAC+CGG + chr2_4:3245234-3245253 None:intergenic 70.0%
CGGTGGGATCCGGTCCGGTT+GGG - chr2_4:3245232-3245251 Msa0308830:three_prime_UTR 70.0%
GGTGGGATCCGGTCCGGTTG+GGG - chr2_4:3245233-3245252 Msa0308830:three_prime_UTR 70.0%
CGGCCATGGCAGCGCCACAA+CGG - chr2_4:3247572-3247591 Msa0308830:CDS 70.0%
GGCCATGGCAGCGCCACAAC+GGG - chr2_4:3247573-3247592 Msa0308830:CDS 70.0%
CGGACCGGATCCCACCGGTC+CGG + chr2_4:3245229-3245248 None:intergenic 75.0%
CGGACCGGTGGGATCCGGTC+CGG - chr2_4:3245227-3245246 Msa0308830:three_prime_UTR 75.0%
CCGGTGGGATCCGGTCCGGT+TGG - chr2_4:3245231-3245250 Msa0308830:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 3244743 3250132 3244743 ID=Msa0308830;Name=Msa0308830
chr2_4 mRNA 3244743 3250132 3244743 ID=Msa0308830-mRNA-1;Parent=Msa0308830;Name=Msa0308830-mRNA-1;_AED=0.06;_eAED=0.06;_QI=140|0.5|0.8|0.8|1|1|5|530|462
chr2_4 exon 3244743 3245465 3244743 ID=Msa0308830-mRNA-1:exon:961;Parent=Msa0308830-mRNA-1
chr2_4 exon 3246067 3246278 3246067 ID=Msa0308830-mRNA-1:exon:960;Parent=Msa0308830-mRNA-1
chr2_4 exon 3247190 3247291 3247190 ID=Msa0308830-mRNA-1:exon:959;Parent=Msa0308830-mRNA-1
chr2_4 exon 3247447 3247602 3247447 ID=Msa0308830-mRNA-1:exon:958;Parent=Msa0308830-mRNA-1
chr2_4 exon 3249267 3250132 3249267 ID=Msa0308830-mRNA-1:exon:957;Parent=Msa0308830-mRNA-1
chr2_4 five_prime_UTR 3249993 3250132 3249993 ID=Msa0308830-mRNA-1:five_prime_utr;Parent=Msa0308830-mRNA-1
chr2_4 CDS 3249267 3249992 3249267 ID=Msa0308830-mRNA-1:cds;Parent=Msa0308830-mRNA-1
chr2_4 CDS 3247447 3247602 3247447 ID=Msa0308830-mRNA-1:cds;Parent=Msa0308830-mRNA-1
chr2_4 CDS 3247190 3247291 3247190 ID=Msa0308830-mRNA-1:cds;Parent=Msa0308830-mRNA-1
chr2_4 CDS 3246067 3246278 3246067 ID=Msa0308830-mRNA-1:cds;Parent=Msa0308830-mRNA-1
chr2_4 CDS 3245273 3245465 3245273 ID=Msa0308830-mRNA-1:cds;Parent=Msa0308830-mRNA-1
chr2_4 three_prime_UTR 3244743 3245272 3244743 ID=Msa0308830-mRNA-1:three_prime_utr;Parent=Msa0308830-mRNA-1
Gene Sequence

>Msa0308830

ATGGGGACTCGAATCCCTTCACATCAGTTAAGTTCCGGACTCTATGTCTCGGGTCGACCAGAACAACCCAAAGAACGGCAACCACCGACAATGGCATCCCGTTCTGTACCATACACCGGTGGTGACCCGAAGAAATCCGGTGAGCTTGGTAAAATGCTAGATATTCCTGTTCTGGATCCGAAATCGCATCCATCTTCTTCTTCTTCTCAACTTAGCACTGGGCCAGCGAGATCCAGACCGAATTCGGGTCAGGTGGGGAAGAATCTTACTGGGTCGGGTACGTTGTCGAGGAAATCAACTGGGTCTGGACCGATAGCGTTACAGCCGACCGGTTTGATAACTTCCGGACCGGTGGGATCCGGTCCGGTTGGGGCGAGTAGACGGTCAGGGCAGCTGGAGCAAAGTGGGTCGATGGGGAAAGCGGTTTATGGGTCGGCAGTGACGAGTTTGGGTGAAGAAGTGAAAGTTGGGTTTAGGGTTTCTAGGTCGGTGGTTTGGGTTTTTATGGCGGTGGTTGCAATGTGTTTGCTTGTTGGTGTGTTTTTGATGGTGGCTGTTAAGAAAAATGTGATTTTGTTTGCACTTGGTGGTGTTATTGTTCCTGTTTTGGTTTTGATTATTTGGAATTGTGTTTGGGGAAGAAAAGGGCTTTTAGGGTTTGTGAAAAGGTATCCTGATGCTGAACTTAGAGGTGCCATTGATGGTCAGTATGTTAAGGTTACTGGGGTTGTAACTTGTGGCAGTATTCCTTTGGAGTCTTCTTACCAAAGAATACCTAGATGTGTATATGTCTCATCAGAATTATATGAATATAAAGGTTGGGGTGGAAAGTCAGCACATCCTAAGCATCGTTGCCTCACTTGGGGTTCTAGATACTCTGAGCGCCACAACGGGTTTTTGGCTTTCTGCCATAGCCAGCTTTGTGAAGGATGGCAGCGCCACGGCGCCATACTCAGATATGGCGGAGACATGTTGGCCAGTTTGAAATACGTGGCAGACTTCTACATATCGGACTTCCAGACCGGGTTAAGAGCATTAGTGAAAGCAGGCTATGGTAACAAAGTTGCTCCTTTTGTGAAACCCACTACTGTCGTTGATGTAACAAAGGAGAACAGAGAGTTATCTCCAAACTTCCTAGGCTGGCTTGCAGATCGCAAACTCTCAACTGATGACCGGATAATGCGCCTCAAGGAAGGGCACATCAAAGAAGGCAGCACAGTAAGTGTTATGGGAGTAGTCCGTCGACACGAGAATGTGCTCATGATTGTTCCTCCAACAGAACCTGTCTCAACAGGTTGTCAGTGGATGCGCTGCCTTTTGCCGACTGGTGTCGAAGGTCTTATCATAACATGTGAGGACAACCAAAATGCCGATGTCATTGCCGTTTAG

Protein sequence

>Msa0308830

MGTRIPSHQLSSGLYVSGRPEQPKERQPPTMASRSVPYTGGDPKKSGELGKMLDIPVLDPKSHPSSSSSQLSTGPARSRPNSGQVGKNLTGSGTLSRKSTGSGPIALQPTGLITSGPVGSGPVGASRRSGQLEQSGSMGKAVYGSAVTSLGEEVKVGFRVSRSVVWVFMAVVAMCLLVGVFLMVAVKKNVILFALGGVIVPVLVLIIWNCVWGRKGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSYQRIPRCVYVSSELYEYKGWGGKSAHPKHRCLTWGSRYSERHNGFLAFCHSQLCEGWQRHGAILRYGGDMLASLKYVADFYISDFQTGLRALVKAGYGNKVAPFVKPTTVVDVTKENRELSPNFLGWLADRKLSTDDRIMRLKEGHIKEGSTVSVMGVVRRHENVLMIVPPTEPVSTGCQWMRCLLPTGVEGLIITCEDNQNADVIAV*