AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1314940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1314940 MtrunA17_Chr8g0344491 98.829 427 5 0 1 427 1 427 0.0 879
Msa1314940 MtrunA17_Chr4g0070231 71.533 411 100 6 22 427 6 404 0.0 593
Msa1314940 MtrunA17_Chr3g0139111 66.506 415 115 10 34 427 29 440 0.0 550
Msa1314940 MtrunA17_Chr4g0045221 31.023 303 186 10 58 344 112 407 9.41e-34 131
Msa1314940 MtrunA17_Chr3g0133651 30.952 294 171 10 62 344 93 365 1.04e-33 130
Msa1314940 MtrunA17_Chr1g0153871 30.137 292 175 9 62 344 97 368 2.66e-33 129
Msa1314940 MtrunA17_Chr1g0153871 27.128 188 111 4 55 222 183 364 8.57e-15 75.9
Msa1314940 MtrunA17_Chr2g0288251 30.592 304 181 9 61 353 59 343 3.60e-33 129
Msa1314940 MtrunA17_Chr2g0328791 31.715 309 189 12 61 355 14 314 5.56e-33 129
Msa1314940 MtrunA17_Chr4g0074711 29.178 353 219 10 14 353 22 356 3.33e-32 126
Msa1314940 MtrunA17_Chr3g0110211 32.500 200 119 5 63 253 26 218 3.63e-28 114
Msa1314940 MtrunA17_Chr6g0466501 26.207 290 172 6 63 345 26 280 4.22e-24 105
Msa1314940 MtrunA17_Chr6g0466501 25.275 182 116 4 63 225 201 381 2.33e-12 68.9
Msa1314940 MtrunA17_Chr6g0465751 26.335 281 165 6 63 336 26 271 6.27e-24 104
Msa1314940 MtrunA17_Chr6g0465751 25.275 182 116 4 63 225 201 381 7.27e-13 70.5
Msa1314940 MtrunA17_Chr3g0134141 27.481 262 148 7 60 312 22 250 8.87e-22 97.8
Msa1314940 MtrunA17_Chr3g0134141 26.490 302 186 10 57 343 103 383 2.48e-16 81.3
Msa1314940 MtrunA17_Chr4g0044541 26.481 287 164 8 63 340 35 283 6.77e-21 95.5
Msa1314940 MtrunA17_Chr4g0044541 28.114 281 167 9 57 322 113 373 1.20e-19 91.7
Msa1314940 MtrunA17_Chr4g0044541 25.134 187 121 3 57 225 208 393 5.55e-13 70.9
Msa1314940 MtrunA17_Chr1g0153181 25.763 295 180 8 42 328 11 274 1.39e-20 94.4
Msa1314940 MtrunA17_Chr1g0153181 26.335 281 173 9 57 322 111 372 1.05e-17 85.5
Msa1314940 MtrunA17_Chr1g0153181 25.824 182 115 4 63 225 212 392 8.58e-13 70.1
Msa1314940 MtrunA17_Chr7g0265341 25.086 291 167 9 48 326 59 310 3.37e-20 93.2
Msa1314940 MtrunA17_Chr7g0265341 26.502 283 169 10 57 322 149 409 1.76e-15 78.6
Msa1314940 MtrunA17_Chr7g0265341 25.414 181 116 3 63 225 250 429 3.07e-12 68.6
Msa1314940 MtrunA17_Chr6g0465631 27.419 310 166 11 57 344 6 278 1.69e-18 87.8
Msa1314940 MtrunA17_Chr6g0466451 27.419 310 166 11 57 344 6 278 1.73e-18 87.8
Msa1314940 MtrunA17_Chr1g0201151 25.773 291 168 10 58 336 26 280 2.17e-18 87.8
Msa1314940 MtrunA17_Chr1g0201151 26.846 298 172 9 57 334 109 380 2.90e-18 87.4
Msa1314940 MtrunA17_Chr1g0179701 24.265 272 160 7 63 323 63 299 6.35e-17 82.8
Msa1314940 MtrunA17_Chr1g0179701 25.857 321 200 11 63 371 151 445 7.95e-17 82.8
Msa1314940 MtrunA17_Chr3g0087481 28.729 181 115 2 57 223 55 235 7.64e-16 76.6
Msa1314940 MtrunA17_Chr3g0087481 28.218 202 118 5 142 339 55 233 9.39e-13 67.8
Msa1314940 MtrunA17_Chr0c09g0493511 25.172 290 181 10 63 345 32 292 1.57e-15 78.6
Msa1314940 MtrunA17_Chr3g0116631 29.609 179 114 2 57 223 104 282 4.29e-15 75.5
Msa1314940 MtrunA17_Chr4g0058151 29.944 177 113 3 57 223 117 292 1.39e-14 73.9
Msa1314940 MtrunA17_Chr4g0061451 42.857 77 44 0 149 225 44 120 6.52e-14 71.6
Msa1314940 MtrunA17_Chr6g0465691 24.913 289 181 10 63 344 32 291 1.25e-13 72.8
Msa1314940 MtrunA17_Chr6g0465691 25.275 182 116 4 63 225 119 299 2.13e-12 68.9
Msa1314940 MtrunA17_Chr1g0190211 35.484 93 57 1 147 236 132 224 1.30e-13 70.1
Msa1314940 MtrunA17_Chr7g0267571 28.095 210 127 4 149 352 111 302 1.32e-13 71.2
Msa1314940 MtrunA17_Chr7g0267571 25.281 178 115 3 64 223 111 288 7.10e-11 63.2
Msa1314940 MtrunA17_Chr3g0121631 45.333 75 40 1 149 223 38 111 1.66e-13 67.8
Msa1314940 MtrunA17_Chr7g0219021 39.241 79 48 0 149 227 42 120 1.72e-13 70.1
Msa1314940 MtrunA17_Chr1g0181111 27.363 201 117 3 50 223 74 272 7.47e-13 68.6
Msa1314940 MtrunA17_Chr3g0119311 39.024 82 50 0 149 230 38 119 1.79e-12 64.3
Msa1314940 MtrunA17_Chr1g0177101 25.521 192 117 3 139 326 100 269 1.54e-11 65.1
Msa1314940 MtrunA17_Chr1g0177101 24.719 178 120 3 61 224 107 284 1.78e-11 65.1
Msa1314940 MtrunA17_Chr3g0086861 38.961 77 47 0 149 225 46 122 2.47e-11 65.5
Msa1314940 MtrunA17_Chr1g0168601 30.631 111 75 1 115 223 119 229 2.79e-11 63.2
Msa1314940 MtrunA17_Chr8g0383661 28.230 209 125 8 51 240 190 392 3.57e-11 65.1
Msa1314940 MtrunA17_Chr7g0266751 29.915 117 73 1 147 263 32 139 3.80e-11 60.8
Msa1314940 MtrunA17_Chr8g0393061 42.857 77 44 0 148 224 212 288 5.41e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1314940 AT1G17370.1 81.955 399 66 2 32 427 24 419 0.0 672
Msa1314940 AT1G17370.2 81.454 399 65 3 32 427 24 416 0.0 665
Msa1314940 AT3G14100.1 80.250 400 74 2 32 427 29 427 0.0 659
Msa1314940 AT1G54080.1 74.194 434 97 4 1 427 1 426 0.0 630
Msa1314940 AT1G54080.2 73.516 438 97 5 1 427 1 430 0.0 624
Msa1314940 AT5G19350.1 31.058 293 188 8 61 344 23 310 3.80e-36 137
Msa1314940 AT5G19350.2 30.375 293 186 8 61 344 23 306 3.11e-35 135
Msa1314940 AT1G49600.3 30.847 295 181 11 61 344 118 400 2.26e-34 133
Msa1314940 AT1G49600.2 30.847 295 181 11 61 344 118 400 2.26e-34 133
Msa1314940 AT1G49600.1 30.743 296 182 11 61 345 118 401 2.35e-34 133
Msa1314940 AT1G11650.2 28.882 322 192 9 33 345 42 335 5.88e-34 131
Msa1314940 AT4G27000.1 30.952 294 174 9 61 345 79 352 2.02e-33 130
Msa1314940 AT5G54900.1 29.966 297 179 9 59 345 57 334 3.53e-33 129
Msa1314940 AT3G19130.1 28.814 295 194 8 61 345 107 395 1.84e-32 127
Msa1314940 AT1G47490.1 29.630 297 175 10 62 344 101 377 1.31e-30 122
Msa1314940 AT1G11650.1 28.767 292 168 8 33 313 42 304 1.04e-29 117
Msa1314940 AT2G18510.1 34.000 200 116 5 63 253 26 218 1.55e-28 115
Msa1314940 AT1G47500.1 28.956 297 177 10 62 344 103 379 2.57e-27 113
Msa1314940 AT4G34110.1 27.636 275 161 6 63 330 37 280 1.08e-23 104
Msa1314940 AT4G34110.1 28.383 303 172 10 57 344 115 387 1.16e-20 95.1
Msa1314940 AT4G34110.1 25.414 181 116 3 63 225 216 395 1.22e-12 70.1
Msa1314940 AT3G16380.1 28.014 282 170 7 63 336 113 369 2.36e-23 102
Msa1314940 AT3G16380.1 26.027 292 165 9 63 337 22 279 4.59e-16 80.5
Msa1314940 AT2G23350.1 29.964 277 163 8 63 328 135 391 1.06e-22 101
Msa1314940 AT2G23350.1 27.076 277 160 7 63 330 47 290 4.64e-19 90.1
Msa1314940 AT2G23350.1 25.668 187 120 4 57 225 220 405 1.08e-12 70.5
Msa1314940 AT1G49760.1 29.054 296 167 11 57 336 124 392 1.22e-22 101
Msa1314940 AT1G49760.1 26.715 277 161 8 63 330 46 289 1.21e-19 92.0
Msa1314940 AT1G49760.1 27.072 181 113 3 63 225 225 404 4.85e-14 74.7
Msa1314940 AT1G49760.2 29.054 296 167 11 57 336 124 392 1.22e-22 101
Msa1314940 AT1G49760.2 26.715 277 161 8 63 330 46 289 1.21e-19 92.0
Msa1314940 AT1G49760.2 27.072 181 113 3 63 225 225 404 4.85e-14 74.7
Msa1314940 AT1G22760.1 27.273 275 161 6 63 329 50 293 1.86e-22 100
Msa1314940 AT1G22760.1 26.733 303 179 8 57 344 127 401 2.40e-16 81.6
Msa1314940 AT1G22760.1 25.414 181 116 3 63 225 230 409 9.36e-13 70.5
Msa1314940 AT1G71770.1 25.275 273 169 6 63 329 60 303 6.28e-22 99.0
Msa1314940 AT1G71770.1 29.085 306 168 10 57 344 137 411 1.18e-18 89.0
Msa1314940 AT1G71770.1 25.263 190 119 4 63 234 240 424 7.92e-14 73.9
Msa1314940 AT1G71770.2 25.275 273 169 6 63 329 60 303 6.28e-22 99.0
Msa1314940 AT1G71770.2 29.085 306 168 10 57 344 137 411 1.18e-18 89.0
Msa1314940 AT1G71770.2 25.263 190 119 4 63 234 240 424 7.92e-14 73.9
Msa1314940 AT1G47490.2 32.571 175 106 6 62 224 101 275 1.05e-20 92.4
Msa1314940 AT2G36660.1 26.335 281 155 8 63 330 25 266 1.49e-18 88.6
Msa1314940 AT2G36660.1 25.632 277 177 8 63 330 113 369 4.41e-16 80.9
Msa1314940 AT1G34140.1 26.708 322 201 8 57 362 22 324 1.53e-18 87.4
Msa1314940 AT1G47500.2 31.429 175 108 6 62 224 103 277 1.56e-18 86.3
Msa1314940 AT4G24770.1 30.337 178 115 2 57 225 145 322 3.87e-17 82.4
Msa1314940 AT4G24770.2 30.337 178 115 2 57 225 145 322 3.87e-17 82.4
Msa1314940 AT3G52150.2 32.275 189 110 5 53 223 65 253 1.16e-16 79.7
Msa1314940 AT3G52150.2 30.256 195 111 7 149 339 78 251 5.10e-14 72.0
Msa1314940 AT3G52150.1 32.275 189 110 5 53 223 65 253 1.16e-16 79.7
Msa1314940 AT3G52150.1 30.256 195 111 7 149 339 78 251 5.10e-14 72.0
Msa1314940 AT2G37220.1 29.787 188 104 2 64 223 93 280 1.41e-16 80.1
Msa1314940 AT3G52380.1 26.068 234 137 6 149 372 118 325 6.71e-15 75.9
Msa1314940 AT3G52380.1 27.523 218 131 7 64 263 118 326 1.67e-13 71.6
Msa1314940 AT5G50250.1 30.726 179 114 3 55 223 105 283 7.38e-15 75.1
Msa1314940 AT3G23830.2 46.753 77 41 0 149 225 37 113 1.02e-14 71.2
Msa1314940 AT3G23830.1 46.753 77 41 0 149 225 37 113 1.02e-14 71.2
Msa1314940 AT4G13860.1 45.714 70 38 0 149 218 5 74 1.88e-14 68.9
Msa1314940 AT1G60000.1 30.000 180 104 5 50 223 90 253 3.97e-14 72.4
Msa1314940 AT4G13850.4 45.333 75 41 0 149 223 37 111 1.07e-13 68.2
Msa1314940 AT4G13850.3 45.205 73 40 0 149 221 37 109 1.56e-13 68.2
Msa1314940 AT4G13850.2 45.205 73 40 0 149 221 37 109 1.92e-13 68.2
Msa1314940 AT4G13850.1 45.205 73 40 0 149 221 37 109 2.14e-13 68.2
Msa1314940 AT4G39260.3 39.286 84 50 1 147 229 6 89 4.81e-13 65.1
Msa1314940 AT3G04500.1 33.684 95 60 1 147 238 137 231 5.39e-13 68.9
Msa1314940 AT5G04280.1 43.421 76 43 0 148 223 8 83 3.40e-12 67.4
Msa1314940 AT5G61030.2 41.333 75 44 0 149 223 42 116 3.66e-12 67.4
Msa1314940 AT5G61030.1 41.333 75 44 0 149 223 42 116 3.66e-12 67.4
Msa1314940 AT1G74230.1 44.156 77 42 1 149 225 36 111 8.59e-12 65.9
Msa1314940 AT3G53460.1 45.333 75 41 0 149 223 259 333 1.18e-11 66.2
Msa1314940 AT3G53460.3 45.333 75 41 0 149 223 259 333 1.18e-11 66.2
Msa1314940 AT3G53460.2 45.333 75 41 0 149 223 259 333 1.18e-11 66.2
Msa1314940 AT2G33410.1 28.902 173 96 5 64 211 8 178 1.51e-11 66.2
Msa1314940 AT3G53460.4 45.333 75 41 0 149 223 280 354 1.56e-11 65.9
Msa1314940 AT4G39260.2 38.961 77 47 0 147 223 6 82 2.11e-11 61.6
Msa1314940 AT1G58470.2 29.032 186 111 6 147 323 6 179 2.63e-11 65.1
Msa1314940 AT1G58470.1 29.032 186 111 6 147 323 6 179 2.63e-11 65.1
Msa1314940 AT3G08000.1 37.805 82 51 0 148 229 42 123 3.20e-11 61.6
Msa1314940 AT4G14300.1 28.977 176 92 6 64 211 8 178 3.64e-11 65.1
Msa1314940 AT4G14300.2 28.977 176 92 6 64 211 8 178 3.64e-11 65.1
Msa1314940 AT5G47320.1 41.333 75 44 0 149 223 33 107 9.42e-11 61.6

Find 147 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACCACCATTTAATTTAAA+AGG 0.167469 8_4:+14043711 None:intergenic
TACAAATGTTTAATCTAATT+TGG 0.181298 8_4:+14043674 None:intergenic
CCTATCCGCAACAGATATTT+TGG 0.201236 8_4:-14044006 Msa1314940:CDS
CATCGTCATTTCCATGCTCT+TGG 0.280996 8_4:-14044474 Msa1314940:CDS
TCTCTGTGGCAAAATAATTA+AGG 0.291025 8_4:-14044337 Msa1314940:intron
CCAATTGCAGCTTGCTTAAG+AGG 0.300686 8_4:+14043909 None:intergenic
GGCAACCTATCAAAGTTAAC+TGG 0.303964 8_4:-14046262 Msa1314940:CDS
CCTTCCATTGAGAGTTAATA+TGG 0.304042 8_4:+14046367 None:intergenic
GTCCAGCGTGATAAAGGATT+TGG 0.304987 8_4:-14044426 Msa1314940:CDS
ATCGTCATTTCCATGCTCTT+GGG 0.313391 8_4:-14044473 Msa1314940:CDS
ACTGGGCGATCAAGGGGATT+TGG 0.334423 8_4:-14045801 Msa1314940:CDS
AAAAGCTTACACCCTTCAAC+TGG 0.359205 8_4:+14046554 None:intergenic
AGCTGCAATTGGAGCAAGCC+AGG 0.365517 8_4:-14043898 Msa1314940:CDS
CCTCTTAAGCAAGCTGCAAT+TGG 0.368129 8_4:-14043909 Msa1314940:CDS
TATGCCCAGTTAACTTTGAT+AGG 0.370081 8_4:+14046257 None:intergenic
GTTCGTGTCCAGCGTGATAA+AGG 0.374267 8_4:-14044432 Msa1314940:CDS
GTAGGCAAATACGCTGCAAC+TGG 0.374470 8_4:-14045302 Msa1314940:CDS
CACACACTGCGGCAAGTACT+TGG 0.374575 8_4:+14046979 None:intergenic
AGAGGATTTGAAGCAGTTCC+AGG 0.379667 8_4:+14044059 None:intergenic
TACTCATGCTGAGGCAGCTC+TGG 0.384996 8_4:-14044388 Msa1314940:CDS
CCTGCTGCTGCGCCTCTACC+AGG 0.385593 8_4:-14044029 Msa1314940:CDS
CATTTCCATGCTCTTGGGGC+TGG 0.386711 8_4:-14044468 Msa1314940:CDS
GCTGTGCAGCAGCAACATTT+TGG 0.387873 8_4:+14043856 None:intergenic
GTCTGTGCCTTTCAGGTAAG+TGG 0.392351 8_4:-14045332 Msa1314940:intron
GCGGGTACTGGCCCAGTTGA+AGG 0.395293 8_4:-14046566 Msa1314940:CDS
CCTGGTAGAGGCGCAGCAGC+AGG 0.402401 8_4:+14044029 None:intergenic
GGCCATTACAACATATTTGT+TGG 0.405771 8_4:-14046117 Msa1314940:CDS
TGTTCAAATATAGTGCTCTT+GGG 0.408510 8_4:-14044099 Msa1314940:intron
ATAACAACAATAAGATATAT+AGG 0.409012 8_4:+14043509 None:intergenic
GTGTTCAAATATAGTGCTCT+TGG 0.414047 8_4:-14044100 Msa1314940:intron
GGCAAATTTCCACTTGGGAT+TGG 0.418426 8_4:+14047015 None:intergenic
GAGGAGTCTCTTTCTGTAAG+AGG 0.424281 8_4:-14049144 Msa1314940:five_prime_UTR
TGCCTTTCAGGTAAGTGGCT+TGG 0.427719 8_4:-14045327 Msa1314940:intron
CGATCGCAGATCTGCTGCTC+TGG 0.428701 8_4:-14046390 Msa1314940:CDS
AGAGGCGCAGCAGCAGGTGG+GGG 0.429003 8_4:+14044035 None:intergenic
GAACTAACAAATGGTTCATC+TGG 0.429816 8_4:-14045219 Msa1314940:intron
TCCAGCGTGATAAAGGATTT+GGG 0.430462 8_4:-14044425 Msa1314940:CDS
TAGTAACAATAAAACCCAAA+TGG 0.431858 8_4:+14043566 None:intergenic
GGTAGAGGCGCAGCAGCAGG+TGG 0.433312 8_4:+14044032 None:intergenic
ATCAGAAGACTGGGCGATCA+AGG 0.435048 8_4:-14045809 Msa1314940:CDS
CCAAGTGGAAATTTGCCTCC+TGG 0.436571 8_4:-14047009 Msa1314940:CDS
CGCTGCAACTGGGCAACAAA+AGG 0.437840 8_4:-14045291 Msa1314940:CDS
CTATTATTCTGCACATTGGT+TGG 0.444186 8_4:-14043772 Msa1314940:three_prime_UTR
CAGGTAAGTGGCTTGGAAGT+AGG 0.445527 8_4:-14045320 Msa1314940:CDS
GGAAATTACTAGGGTTCAAA+GGG 0.445848 8_4:+14049105 None:intergenic
TCAATACACAACTGTTTATG+TGG 0.446274 8_4:-14044894 Msa1314940:CDS
GTGTATTGAGGATTGTTCTC+AGG 0.448950 8_4:+14044908 None:intergenic
ACTGTTTATGTGGGTAACCT+TGG 0.450682 8_4:-14044884 Msa1314940:CDS
GGGAGCAAGCCCACTCCACC+TGG 0.463873 8_4:-14044077 Msa1314940:CDS
CTGTTTATGTGGGTAACCTT+GGG 0.467747 8_4:-14044883 Msa1314940:CDS
AGCTGAAAATGCAGAATCAT+AGG 0.471928 8_4:-14049045 Msa1314940:exon
GGTGTTAAAAGTAAAACTCT+AGG 0.478246 8_4:-14043751 Msa1314940:three_prime_UTR
CTGGCCATATTAACTCTCAA+TGG 0.478563 8_4:-14046371 Msa1314940:CDS
TGTTTAATCTAATTTGGTAG+TGG 0.485287 8_4:+14043680 None:intergenic
GTTATGTGGGATCAGAAGAC+TGG 0.486448 8_4:-14045819 Msa1314940:CDS
AGTAACAATAAAACCCAAAT+GGG 0.490147 8_4:+14043567 None:intergenic
GTGGCTCGGTTACTTGTGTA+TGG 0.493557 8_4:+14046606 None:intergenic
ATGAAGCTTACGAACAACTT+TGG 0.494255 8_4:+14046040 None:intergenic
AACTTCTTGCAGAAGTGGCT+CGG 0.499016 8_4:+14046592 None:intergenic
GGTCAGAGAGAGGATACATC+AGG 0.501078 8_4:-14046227 Msa1314940:intron
AACTGGGCAACAAAAGGTGC+TGG 0.502538 8_4:-14045285 Msa1314940:CDS
GGCAGCTCTGGCAATTCAGA+TGG 0.502691 8_4:-14044376 Msa1314940:CDS
CCAGGAGGCAAATTTCCACT+TGG 0.505891 8_4:+14047009 None:intergenic
TCTTGGGGCTGGTGTGATAG+AGG 0.507053 8_4:-14044457 Msa1314940:CDS
CACCAACAAATATGTTGTAA+TGG 0.507913 8_4:+14046115 None:intergenic
CGGGTACTGGCCCAGTTGAA+GGG 0.510220 8_4:-14046565 Msa1314940:CDS
TGGAAATTACTAGGGTTCAA+AGG 0.511255 8_4:+14049104 None:intergenic
TGCCGACTATTCATAAGAAA+AGG 0.512058 8_4:+14049202 None:intergenic
CCAAAATATCTGTTGCGGAT+AGG 0.514090 8_4:+14044006 None:intergenic
CAAGCCAGGCGATATACGAC+GGG 0.515042 8_4:-14043884 Msa1314940:CDS
TGTTTCATTCCGTAGCCAGC+AGG 0.516705 8_4:-14045775 Msa1314940:intron
ACATAAACAGTTGTGTATTG+AGG 0.517017 8_4:+14044896 None:intergenic
ATATCTGTTGCGGATAGGCC+TGG 0.519370 8_4:+14044011 None:intergenic
TAGAGATGCAAGAGTTATGT+GGG 0.520268 8_4:-14045832 Msa1314940:CDS
TTAGAGATGCAAGAGTTATG+TGG 0.526961 8_4:-14045833 Msa1314940:intron
TCAGAAGACTGGGCGATCAA+GGG 0.527570 8_4:-14045808 Msa1314940:CDS
TAGAGGCGCAGCAGCAGGTG+GGG 0.531472 8_4:+14044034 None:intergenic
TGTAAGAGGGTCACTGCGTA+GGG 0.532228 8_4:-14049130 Msa1314940:five_prime_UTR
CAGCTAGCAATGAGCAAGAT+GGG 0.532413 8_4:-14043972 Msa1314940:CDS
TTCTTATGAATAGTCGGCAA+GGG 0.532789 8_4:-14049198 Msa1314940:five_prime_UTR
GAAGCAGTTCCAGGTGGAGT+GGG 0.535669 8_4:+14044068 None:intergenic
CAGGAGGCAAATTTCCACTT+GGG 0.537949 8_4:+14047010 None:intergenic
TGGTCTCTTAGCTCCACCTC+AGG 0.539491 8_4:-14048930 Msa1314940:intron
GCAGCTAGCAATGAGCAAGA+TGG 0.547662 8_4:-14043973 Msa1314940:CDS
CTGTAAGAGGGTCACTGCGT+AGG 0.547670 8_4:-14049131 Msa1314940:five_prime_UTR
TCGTCATTTCCATGCTCTTG+GGG 0.548558 8_4:-14044472 Msa1314940:CDS
TGAAGCAGTTCCAGGTGGAG+TGG 0.549578 8_4:+14044067 None:intergenic
GTTCAAATATAGTGCTCTTG+GGG 0.552630 8_4:-14044098 Msa1314940:intron
AGTGTGGTGGAACTAACAAA+TGG 0.554047 8_4:-14045228 Msa1314940:CDS
GTAGAGGCGCAGCAGCAGGT+GGG 0.554923 8_4:+14044033 None:intergenic
GTTGCGGATAGGCCTGGTAG+AGG 0.555251 8_4:+14044017 None:intergenic
TTTCTTATGAATAGTCGGCA+AGG 0.563795 8_4:-14049199 Msa1314940:five_prime_UTR
TGTATCCTCTCTCTGACCAC+TGG 0.563870 8_4:+14046232 None:intergenic
TTAAGAGGATGCTGTGCTTG+AGG 0.565759 8_4:+14043924 None:intergenic
AGACTCCTCTGAGAAAATAC+CGG 0.565936 8_4:+14049158 None:intergenic
TCACACCAGCCCCAAGAGCA+TGG 0.567987 8_4:+14044463 None:intergenic
ATATCTATTATTCTGCACAT+TGG 0.568864 8_4:-14043776 Msa1314940:three_prime_UTR
TGTTGGTGACCTCAGTCCTG+AGG 0.574357 8_4:-14046100 Msa1314940:CDS
TGTGAGAAAATGCAGGTATG+TGG 0.574705 8_4:-14046636 Msa1314940:intron
CAGAAGACTGGGCGATCAAG+GGG 0.575925 8_4:-14045807 Msa1314940:CDS
GAATATGGACCAACCTGAGG+TGG 0.581351 8_4:+14048917 None:intergenic
TGTGGGTAACCTTGGGTCGG+AGG 0.581624 8_4:-14044876 Msa1314940:intron
CCATATTAACTCTCAATGGA+AGG 0.584606 8_4:-14046367 Msa1314940:CDS
TGAGGTGGAGCTAAGAGACC+AGG 0.584784 8_4:+14048932 None:intergenic
AGTGCTATAAATGATTTGAC+CGG 0.585401 8_4:-14045657 Msa1314940:intron
GCATGCGAAAAGTGTAGCAT+CGG 0.586459 8_4:+14046074 None:intergenic
AGTGTAGCATCGGTAACCTC+AGG 0.587772 8_4:+14046084 None:intergenic
AGGAGTCTCTTTCTGTAAGA+GGG 0.588380 8_4:-14049143 Msa1314940:five_prime_UTR
TTATGTGGGTAACCTTGGGT+CGG 0.588868 8_4:-14044879 Msa1314940:CDS
CAAGTACTTGGATCAAAACC+AGG 0.592915 8_4:+14046991 None:intergenic
ACCCAAATCCTTTATCACGC+TGG 0.596264 8_4:+14044424 None:intergenic
GTGTTAAAAGTAAAACTCTA+GGG 0.603841 8_4:-14043750 Msa1314940:three_prime_UTR
GCAAGCCAGGCGATATACGA+CGG 0.611397 8_4:-14043885 Msa1314940:CDS
GCAGCTCTGGCAATTCAGAT+GGG 0.613986 8_4:-14044375 Msa1314940:CDS
CAGATTGAACCAATCCCAAG+TGG 0.614650 8_4:-14047024 Msa1314940:CDS
TTTGCCACAGAGATAAGACT+GGG 0.619779 8_4:+14044347 None:intergenic
GGATTTGAAGCAGTTCCAGG+TGG 0.620256 8_4:+14044062 None:intergenic
GTATGCCAAAATATCTGTTG+CGG 0.625088 8_4:+14044001 None:intergenic
GCAACCTATCAAAGTTAACT+GGG 0.627335 8_4:-14046261 Msa1314940:CDS
CAATACACAACTGTTTATGT+GGG 0.627906 8_4:-14044893 Msa1314940:CDS
TAGGCAAATACGCTGCAACT+GGG 0.629811 8_4:-14045301 Msa1314940:CDS
TTTCCAGTGAAAATTTCACT+AGG 0.629878 8_4:-14049087 Msa1314940:five_prime_UTR
CAAGAGCATGGAAATGACGA+TGG 0.630427 8_4:+14044475 None:intergenic
TTATGTGGGATCAGAAGACT+GGG 0.632262 8_4:-14045818 Msa1314940:CDS
CTCGGACAGTAAAAGTGTGG+TGG 0.632747 8_4:-14045241 Msa1314940:CDS
AGTTTCTTACCTCCGACCCA+AGG 0.634040 8_4:+14044867 None:intergenic
TATTGAAGAGAAGCAAAACT+CGG 0.637066 8_4:-14045259 Msa1314940:CDS
AAAGCTTACACCCTTCAACT+GGG 0.638369 8_4:+14046555 None:intergenic
GTGAGAAAATGCAGGTATGT+GGG 0.639135 8_4:-14046635 Msa1314940:intron
ATATGCCAGTGGTCAGAGAG+AGG 0.645760 8_4:-14046237 Msa1314940:CDS
ATGAGTTTGTATCATGTATG+CGG 0.659413 8_4:-14043652 Msa1314940:three_prime_UTR
GAGATATAGTACTCATGCTG+AGG 0.660148 8_4:-14044397 Msa1314940:CDS
CTAGCAATGAGCAAGATGGG+TGG 0.664649 8_4:-14043969 Msa1314940:CDS
TGGGCAACAAAAGGTGCTGG+CGG 0.665006 8_4:-14045282 Msa1314940:CDS
TTCAAATATAGTGCTCTTGG+GGG 0.666129 8_4:-14044097 Msa1314940:intron
CAACAGTCTCTCTATCACCC+TGG 0.675382 8_4:-14048950 Msa1314940:CDS
AAACTCGGACAGTAAAAGTG+TGG 0.685436 8_4:-14045244 Msa1314940:CDS
CATCGGTAACCTCAGGACTG+AGG 0.688396 8_4:+14046091 None:intergenic
AGCCAGGCGATATACGACGG+GGG 0.690976 8_4:-14043882 Msa1314940:CDS
GAGGTGGAGCTAAGAGACCA+GGG 0.691045 8_4:+14048933 None:intergenic
CTCCTCTGAGAAAATACCGG+AGG 0.697220 8_4:+14049161 None:intergenic
GTTAACTGGGCATATGCCAG+TGG 0.699312 8_4:-14046248 Msa1314940:CDS
AATGCCCAGTCTTATCTCTG+TGG 0.700945 8_4:-14044351 Msa1314940:CDS
AAGCCAGGCGATATACGACG+GGG 0.734249 8_4:-14043883 Msa1314940:CDS
TAGACAAAACTCACACACTG+CGG 0.742849 8_4:+14046968 None:intergenic
GTACTTGGATCAAAACCAGG+AGG 0.749205 8_4:+14046994 None:intergenic
GAAATTACTAGGGTTCAAAG+GGG 0.751292 8_4:+14049106 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAATTTAATAAGAAAATT+GGG - chr8_4:14043959-14043978 Msa1314940:CDS 10.0%
!!! AAAAAATTGAATTTTTTTAG+TGG - chr8_4:14044021-14044040 Msa1314940:CDS 10.0%
!!! AAAAATTGAATTTTTTTAGT+GGG - chr8_4:14044022-14044041 Msa1314940:CDS 10.0%
!!! AAAATTGATTTTTTATTTAG+TGG - chr8_4:14044063-14044082 Msa1314940:CDS 10.0%
!!! AAATTGATTTTTTATTTAGT+GGG - chr8_4:14044064-14044083 Msa1314940:CDS 10.0%
!!! AAAAAAATTGAATTTTATAG+TGG - chr8_4:14044146-14044165 Msa1314940:intron 10.0%
!!! AAAAAATTGAATTTTATAGT+GGG - chr8_4:14044147-14044166 Msa1314940:intron 10.0%
!! TTAATTCATACAAAAAATAA+TGG + chr8_4:14044224-14044243 None:intergenic 10.0%
!!! ATTATTTTTTGTATGAATTA+AGG - chr8_4:14044223-14044242 Msa1314940:intron 10.0%
!!! CTTTTAAAATAATTAAACAT+AGG + chr8_4:14047250-14047269 None:intergenic 10.0%
!! CTTCAATTTAATAAGAAAAT+TGG - chr8_4:14043958-14043977 Msa1314940:CDS 15.0%
!! TCAATTTAATAAGAAAATTG+GGG - chr8_4:14043960-14043979 Msa1314940:CDS 15.0%
!!! TGATGAAAAAAATTGAATTT+TGG - chr8_4:14044180-14044199 Msa1314940:intron 15.0%
!! ATAACATTTAGATTCATAAA+GGG + chr8_4:14045014-14045033 None:intergenic 15.0%
!! AATAACATTTAGATTCATAA+AGG + chr8_4:14045015-14045034 None:intergenic 15.0%
!! AATCATAAAACAAAAGAAAA+GGG + chr8_4:14045816-14045835 None:intergenic 15.0%
!!! TATTTTTACTAAGAAATCAT+AGG + chr8_4:14046709-14046728 None:intergenic 15.0%
!! AATCTTCATTTATTCAAAAT+GGG - chr8_4:14046759-14046778 Msa1314940:intron 15.0%
!!! TAAAATCTTAATTTGTGTTT+TGG - chr8_4:14046981-14047000 Msa1314940:intron 15.0%
!!! AAAATCTTAATTTGTGTTTT+GGG - chr8_4:14046982-14047001 Msa1314940:CDS 15.0%
!!! TATATTTTTTGTCATTTTGT+AGG - chr8_4:14047032-14047051 Msa1314940:intron 15.0%
!! TAATTGGCTAAAATAAAATA+AGG + chr8_4:14047115-14047134 None:intergenic 15.0%
!!! TATTTTAGCCAATTATAATT+TGG - chr8_4:14047120-14047139 Msa1314940:intron 15.0%
!! TATGCTGAAAAAAAATATAT+AGG + chr8_4:14047290-14047309 None:intergenic 15.0%
!!! TATATCTATTTTTCAATCTA+TGG - chr8_4:14047881-14047900 Msa1314940:intron 15.0%
!! ATAAAACAAAAAGCTAAAAT+AGG + chr8_4:14048030-14048049 None:intergenic 15.0%
!! ACATATATTGTAAAATCAAA+AGG + chr8_4:14048116-14048135 None:intergenic 15.0%
!!! CTTTTTCCTTTTAAATTAAA+TGG - chr8_4:14049003-14049022 Msa1314940:CDS 15.0%
!! TACAAATGTTTAATCTAATT+TGG + chr8_4:14049049-14049068 None:intergenic 15.0%
!! ATAACAACAATAAGATATAT+AGG + chr8_4:14049214-14049233 None:intergenic 15.0%
!!! TTGCACATTTTTTGTTTATT+AGG - chr8_4:14043879-14043898 Msa1314940:CDS 20.0%
!!! TGCACATTTTTTGTTTATTA+GGG - chr8_4:14043880-14043899 Msa1314940:CDS 20.0%
!!! TAATGGGTTTTATTTTTAGT+GGG - chr8_4:14043983-14044002 Msa1314940:CDS 20.0%
!!! ATTTTTTTTTAGTGGGTATT+TGG - chr8_4:14044112-14044131 Msa1314940:intron 20.0%
!!! TCATACAAAAAATAATGGAA+TGG + chr8_4:14044219-14044238 None:intergenic 20.0%
!!! ATTAAGGTTGTTAATTTTTC+TGG - chr8_4:14044239-14044258 Msa1314940:intron 20.0%
!!! TTAAGGTTGTTAATTTTTCT+GGG - chr8_4:14044240-14044259 Msa1314940:intron 20.0%
!! TATATATATGAAAGCTTACT+TGG - chr8_4:14044366-14044385 Msa1314940:CDS 20.0%
!!! AATTTTTTACCTTTTTGTGT+TGG - chr8_4:14044493-14044512 Msa1314940:CDS 20.0%
!! TCACAAATGAAACTAAAATT+GGG + chr8_4:14044727-14044746 None:intergenic 20.0%
!! ATCACAAATGAAACTAAAAT+TGG + chr8_4:14044728-14044747 None:intergenic 20.0%
!! AAAATAGTTCAGTACTTTAA+AGG + chr8_4:14044924-14044943 None:intergenic 20.0%
!! ATGAATCTAAATGTTATTAG+AGG - chr8_4:14045017-14045036 Msa1314940:intron 20.0%
!!! CATTTTCATTTTCTTCTATT+AGG - chr8_4:14045473-14045492 Msa1314940:intron 20.0%
!!! TTTTTTGTCTGTTATTGTTT+TGG - chr8_4:14045521-14045540 Msa1314940:intron 20.0%
!! ACAAATATTCAATCTTGATT+TGG - chr8_4:14045615-14045634 Msa1314940:intron 20.0%
!! AGAAAAGATGAAAAGAAAAA+GGG + chr8_4:14045642-14045661 None:intergenic 20.0%
!! AAGAAAAGATGAAAAGAAAA+AGG + chr8_4:14045643-14045662 None:intergenic 20.0%
!! AAGGTAAAAAAGAAGAAAAA+AGG + chr8_4:14045667-14045686 None:intergenic 20.0%
!! GATCAATAAGATTGAATAAA+AGG + chr8_4:14045789-14045808 None:intergenic 20.0%
!! CAATCATAAAACAAAAGAAA+AGG + chr8_4:14045817-14045836 None:intergenic 20.0%
!! TTGCAAGATATAATAAACTT+AGG + chr8_4:14045930-14045949 None:intergenic 20.0%
!!! ATGTTTTGAACAAATCATTT+TGG - chr8_4:14046544-14046563 Msa1314940:CDS 20.0%
!!! ATATGTTTCTTTGAATTTTC+AGG - chr8_4:14046582-14046601 Msa1314940:CDS 20.0%
!!! TAGCATCCATTTTATATATT+TGG - chr8_4:14046727-14046746 Msa1314940:intron 20.0%
!! CCAATTCCAAATATATAAAA+TGG + chr8_4:14046736-14046755 None:intergenic 20.0%
!!! CCATTTTATATATTTGGAAT+TGG - chr8_4:14046733-14046752 Msa1314940:intron 20.0%
!! CAATCTTCATTTATTCAAAA+TGG - chr8_4:14046758-14046777 Msa1314940:intron 20.0%
!! TTATTCCATATATGTGATAA+TGG - chr8_4:14046796-14046815 Msa1314940:intron 20.0%
!!! AAATCTTAATTTGTGTTTTG+GGG - chr8_4:14046983-14047002 Msa1314940:CDS 20.0%
!!! AGACTTTTCCAAATTATAAT+TGG + chr8_4:14047131-14047150 None:intergenic 20.0%
!! ATTTACTAACGAAAAATCAA+TGG + chr8_4:14047154-14047173 None:intergenic 20.0%
!! TTTCGATTTAAAAATAGATC+TGG - chr8_4:14047599-14047618 Msa1314940:intron 20.0%
!! TTCGATTTAAAAATAGATCT+GGG - chr8_4:14047600-14047619 Msa1314940:intron 20.0%
!! TTAATCACCTAAAAATCATT+AGG + chr8_4:14047664-14047683 None:intergenic 20.0%
!! TTAATACATCTCTAACATAA+TGG + chr8_4:14048071-14048090 None:intergenic 20.0%
!! CTTTATTCATGAATTTGATT+TGG - chr8_4:14048569-14048588 Msa1314940:intron 20.0%
!!! TTTCCTTTTAAATTAAATGG+TGG - chr8_4:14049006-14049025 Msa1314940:CDS 20.0%
!! TACCTTTTCTTATGAATAGT+CGG - chr8_4:14043516-14043535 Msa1314940:three_prime_UTR 25.0%
!! ATTTTCACTGGAAATTACTA+GGG + chr8_4:14043627-14043646 None:intergenic 25.0%
!! AATTTTCACTGGAAATTACT+AGG + chr8_4:14043628-14043647 None:intergenic 25.0%
! TAATAAGAAAATTGGGGTAA+TGG - chr8_4:14043966-14043985 Msa1314940:CDS 25.0%
! AATAAGAAAATTGGGGTAAT+GGG - chr8_4:14043967-14043986 Msa1314940:CDS 25.0%
!!! GTAATGGGTTTTATTTTTAG+TGG - chr8_4:14043982-14044001 Msa1314940:CDS 25.0%
!!! TTTTATTTTTAGTGGGTGTT+TGG - chr8_4:14043990-14044009 Msa1314940:CDS 25.0%
!!! ATTTTTTATTTAGTGGGTGT+TGG - chr8_4:14044070-14044089 Msa1314940:CDS 25.0%
!!! TTTTTTATTTAGTGGGTGTT+GGG - chr8_4:14044071-14044090 Msa1314940:CDS 25.0%
! CATCATATTACTAAATAGAC+TGG + chr8_4:14044431-14044450 None:intergenic 25.0%
! GTCTATTTAGTAATATGATG+TGG - chr8_4:14044431-14044450 Msa1314940:CDS 25.0%
! ATTTAGTAATATGATGTGGT+TGG - chr8_4:14044435-14044454 Msa1314940:CDS 25.0%
!! ATAAGTTTGCAGTTGATATA+TGG - chr8_4:14044525-14044544 Msa1314940:intron 25.0%
!!! TTTAGTTTGTATTCAAACTG+TGG - chr8_4:14044674-14044693 Msa1314940:intron 25.0%
! TTTCATTTGTGATTAACATG+CGG - chr8_4:14044735-14044754 Msa1314940:intron 25.0%
!!! TTTTTGAGTGGAAAGTAAAA+GGG - chr8_4:14045230-14045249 Msa1314940:CDS 25.0%
!!! TATTTTAGATAACTTGTCCT+TGG - chr8_4:14045261-14045280 Msa1314940:CDS 25.0%
!!! ATTTTAGATAACTTGTCCTT+GGG - chr8_4:14045262-14045281 Msa1314940:CDS 25.0%
! AGGAAAAACAAAAATCCTAT+GGG + chr8_4:14045395-14045414 None:intergenic 25.0%
! TAGGAAAAACAAAAATCCTA+TGG + chr8_4:14045396-14045415 None:intergenic 25.0%
! GAAAAGATGAAAAGAAAAAG+GGG + chr8_4:14045641-14045660 None:intergenic 25.0%
! AAGAGAAGAAACAAACAATT+AGG + chr8_4:14046037-14046056 None:intergenic 25.0%
! AGTTCTTCTATAATTGTGTT+AGG - chr8_4:14046389-14046408 Msa1314940:CDS 25.0%
!! ATAATTGTGTTAGGTTAGTT+TGG - chr8_4:14046398-14046417 Msa1314940:CDS 25.0%
!! AATTCAATGGTTTGTAGATT+CGG - chr8_4:14046436-14046455 Msa1314940:intron 25.0%
!! CACTAACTTTATCTTTTTGA+TGG - chr8_4:14046862-14046881 Msa1314940:intron 25.0%
!! ATTATTTTCACTTATGATCG+AGG - chr8_4:14047351-14047370 Msa1314940:intron 25.0%
! TATTATTGTTTCAGGAACTA+CGG + chr8_4:14047540-14047559 None:intergenic 25.0%
! TTCCTGAAACAATAATAGAA+TGG - chr8_4:14047543-14047562 Msa1314940:intron 25.0%
! AACCATTCTATTATTGTTTC+AGG + chr8_4:14047548-14047567 None:intergenic 25.0%
! TCGATTTAAAAATAGATCTG+GGG - chr8_4:14047601-14047620 Msa1314940:intron 25.0%
!!! AATAATGTTTTGAAACCCAT+TGG - chr8_4:14047977-14047996 Msa1314940:intron 25.0%
!! AGGAATACAAATATTGGTTA+TGG + chr8_4:14048004-14048023 None:intergenic 25.0%
! TTTATTCTCCATTTCTACTT+TGG - chr8_4:14048045-14048064 Msa1314940:intron 25.0%
! AAAGGTCGTAATGATTAAAA+TGG + chr8_4:14048195-14048214 None:intergenic 25.0%
!!! ATTTTAATCATTACGACCTT+TGG - chr8_4:14048194-14048213 Msa1314940:intron 25.0%
! ATATCTATTATTCTGCACAT+TGG - chr8_4:14048944-14048963 Msa1314940:CDS 25.0%
! GTGTTAAAAGTAAAACTCTA+GGG - chr8_4:14048970-14048989 Msa1314940:CDS 25.0%
!! TCACCACCATTTAATTTAAA+AGG + chr8_4:14049012-14049031 None:intergenic 25.0%
!!! TTTTAAATTAAATGGTGGTG+AGG - chr8_4:14049011-14049030 Msa1314940:CDS 25.0%
! TGTTTAATCTAATTTGGTAG+TGG + chr8_4:14049043-14049062 None:intergenic 25.0%
! AGTAACAATAAAACCCAAAT+GGG + chr8_4:14049156-14049175 None:intergenic 25.0%
! TAGTAACAATAAAACCCAAA+TGG + chr8_4:14049157-14049176 None:intergenic 25.0%
TTTCCAGTGAAAATTTCACT+AGG - chr8_4:14043633-14043652 Msa1314940:three_prime_UTR 30.0%
!!! GAATTTTTTTAGTGGGTGTT+TGG - chr8_4:14044029-14044048 Msa1314940:CDS 30.0%
!!! TGAATTTTATAGTGGGTAGT+TGG - chr8_4:14044154-14044173 Msa1314940:intron 30.0%
!!! GGTAAAGAAGCATTTTTTGT+AGG - chr8_4:14044387-14044406 Msa1314940:CDS 30.0%
ATATGGTATTGTTTCCTTTG+AGG - chr8_4:14044542-14044561 Msa1314940:intron 30.0%
AAGAAAACAAAACTCCTATC+TGG + chr8_4:14044644-14044663 None:intergenic 30.0%
AACCCGATTAAGTCATATTA+GGG - chr8_4:14044838-14044857 Msa1314940:intron 30.0%
! TTTCCCTTTTGCAAATCAAA+CGG + chr8_4:14044865-14044884 None:intergenic 30.0%
!!! GTTTTTGAGTGGAAAGTAAA+AGG - chr8_4:14045229-14045248 Msa1314940:CDS 30.0%
!! GTTTGATTTGCAGAAAGTAA+GGG + chr8_4:14045369-14045388 None:intergenic 30.0%
!! TGTTTGATTTGCAGAAAGTA+AGG + chr8_4:14045370-14045389 None:intergenic 30.0%
ACAAACTAAACTACAACAGT+AGG + chr8_4:14045415-14045434 None:intergenic 30.0%
!! TTTAGTTTGTATTCGAACTG+TGG - chr8_4:14045425-14045444 Msa1314940:intron 30.0%
AGAAAATGAAAATGAGTCCA+GGG + chr8_4:14045467-14045486 None:intergenic 30.0%
AAGAAAATGAAAATGAGTCC+AGG + chr8_4:14045468-14045487 None:intergenic 30.0%
AACATTAACTAGAGTGAATG+GGG + chr8_4:14045564-14045583 None:intergenic 30.0%
GAACATTAACTAGAGTGAAT+GGG + chr8_4:14045565-14045584 None:intergenic 30.0%
TATCAATACAGTATAGCATG+AGG + chr8_4:14045587-14045606 None:intergenic 30.0%
CAAGAAGTAACATACAGTAA+TGG + chr8_4:14045981-14046000 None:intergenic 30.0%
!! TAAGCTTTTTAGGAAAGAGA+AGG - chr8_4:14046180-14046199 Msa1314940:intron 30.0%
TTACACTCAGTTCAATTCAA+TGG - chr8_4:14046423-14046442 Msa1314940:intron 30.0%
! ATTCAATGGTTTGTAGATTC+GGG - chr8_4:14046437-14046456 Msa1314940:intron 30.0%
CACCAACAAATATGTTGTAA+TGG + chr8_4:14046608-14046627 None:intergenic 30.0%
ATGCACCATTATCACATATA+TGG + chr8_4:14046804-14046823 None:intergenic 30.0%
TGCATACTAAACAACTTTGT+TGG - chr8_4:14046824-14046843 Msa1314940:intron 30.0%
AGTGCTATAAATGATTTGAC+CGG - chr8_4:14047063-14047082 Msa1314940:intron 30.0%
!!! CTGAGAATATGGTTTTGTTT+CGG + chr8_4:14047178-14047197 None:intergenic 30.0%
AAACCATATTCTCAGTTCAA+AGG - chr8_4:14047183-14047202 Msa1314940:intron 30.0%
!!! TTTTTCAGCATATTGACTTC+TGG - chr8_4:14047298-14047317 Msa1314940:intron 30.0%
TATTGAAGAGAAGCAAAACT+CGG - chr8_4:14047461-14047480 Msa1314940:intron 30.0%
CGATTTAAAAATAGATCTGG+GGG - chr8_4:14047602-14047621 Msa1314940:intron 30.0%
CCTAAAAATCATTAGGTCAA+GGG + chr8_4:14047657-14047676 None:intergenic 30.0%
ACCTAAAAATCATTAGGTCA+AGG + chr8_4:14047658-14047677 None:intergenic 30.0%
!! AAACACTTTTTATCCTACAG+AGG - chr8_4:14047760-14047779 Msa1314940:intron 30.0%
ACATAAACAGTTGTGTATTG+AGG + chr8_4:14047827-14047846 None:intergenic 30.0%
TCAATACACAACTGTTTATG+TGG - chr8_4:14047826-14047845 Msa1314940:intron 30.0%
CAATACACAACTGTTTATGT+GGG - chr8_4:14047827-14047846 Msa1314940:intron 30.0%
TTTGAACAAAACAGTTCATC+TGG - chr8_4:14047904-14047923 Msa1314940:intron 30.0%
TAAGCTTGGAAAATCATCAA+TGG + chr8_4:14047937-14047956 None:intergenic 30.0%
GCATCATAGAATAATAAGCT+TGG + chr8_4:14047951-14047970 None:intergenic 30.0%
! AATATTGGTTATGGACCAAT+GGG + chr8_4:14047995-14048014 None:intergenic 30.0%
! AAATATTGGTTATGGACCAA+TGG + chr8_4:14047996-14048015 None:intergenic 30.0%
AGGTGAAGGAATACAAATAT+TGG + chr8_4:14048010-14048029 None:intergenic 30.0%
CAAAAAGCTAAAATAGGTGA+AGG + chr8_4:14048024-14048043 None:intergenic 30.0%
TCTCTGTGGCAAAATAATTA+AGG - chr8_4:14048383-14048402 Msa1314940:intron 30.0%
TTTATGCTGAATATTGTGTG+AGG - chr8_4:14048473-14048492 Msa1314940:intron 30.0%
TTGAACACAATAATAGTCAG+AGG + chr8_4:14048608-14048627 None:intergenic 30.0%
TGTTCAAATATAGTGCTCTT+GGG - chr8_4:14048621-14048640 Msa1314940:intron 30.0%
GGTGTTAAAAGTAAAACTCT+AGG - chr8_4:14048969-14048988 Msa1314940:CDS 30.0%
ATGAGTTTGTATCATGTATG+CGG - chr8_4:14049068-14049087 Msa1314940:five_prime_UTR 30.0%
! TGCCGACTATTCATAAGAAA+AGG + chr8_4:14043521-14043540 None:intergenic 35.0%
TTTCTTATGAATAGTCGGCA+AGG - chr8_4:14043521-14043540 Msa1314940:three_prime_UTR 35.0%
TTCTTATGAATAGTCGGCAA+GGG - chr8_4:14043522-14043541 Msa1314940:three_prime_UTR 35.0%
GAAATTACTAGGGTTCAAAG+GGG + chr8_4:14043617-14043636 None:intergenic 35.0%
GGAAATTACTAGGGTTCAAA+GGG + chr8_4:14043618-14043637 None:intergenic 35.0%
TGGAAATTACTAGGGTTCAA+AGG + chr8_4:14043619-14043638 None:intergenic 35.0%
! CTTCCTAGTGAAATTTTCAC+TGG + chr8_4:14043639-14043658 None:intergenic 35.0%
AGCTGAAAATGCAGAATCAT+AGG - chr8_4:14043675-14043694 Msa1314940:three_prime_UTR 35.0%
CGAAGAAATGGAGATGAATA+TGG + chr8_4:14043821-14043840 None:intergenic 35.0%
! TGGGTTTTCATCAATTGAGT+AGG - chr8_4:14044259-14044278 Msa1314940:intron 35.0%
! GGGTTTTCATCAATTGAGTA+GGG - chr8_4:14044260-14044279 Msa1314940:intron 35.0%
! GGTTTTCATCAATTGAGTAG+GGG - chr8_4:14044261-14044280 Msa1314940:intron 35.0%
! TGTGTGTTTGAAGTGAGAAA+TGG - chr8_4:14044313-14044332 Msa1314940:intron 35.0%
!! GGTTGGTGTTAATGTAACTA+TGG - chr8_4:14044452-14044471 Msa1314940:CDS 35.0%
ACACTAATGCCAACACAAAA+AGG + chr8_4:14044505-14044524 None:intergenic 35.0%
!! TGTTTCCTTTGAGGTTTAGT+TGG - chr8_4:14044551-14044570 Msa1314940:intron 35.0%
!! GTTTCCTTTGAGGTTTAGTT+GGG - chr8_4:14044552-14044571 Msa1314940:intron 35.0%
! TGAATTTGACTTAGCCAGAT+AGG - chr8_4:14044627-14044646 Msa1314940:intron 35.0%
TGTTTCCTTGGAGGTTTAAT+TGG - chr8_4:14044761-14044780 Msa1314940:intron 35.0%
GTTTCCTTGGAGGTTTAATT+GGG - chr8_4:14044762-14044781 Msa1314940:intron 35.0%
ATTTCCCAATTAAACCTCCA+AGG + chr8_4:14044769-14044788 None:intergenic 35.0%
AATTGGGAAATGAATCTGCA+TGG - chr8_4:14044778-14044797 Msa1314940:intron 35.0%
GAAATGAATCTGCATGGTTT+AGG - chr8_4:14044784-14044803 Msa1314940:intron 35.0%
GAACCCGATTAAGTCATATT+AGG - chr8_4:14044837-14044856 Msa1314940:intron 35.0%
GACCCTAATATGACTTAATC+GGG + chr8_4:14044843-14044862 None:intergenic 35.0%
GGACCCTAATATGACTTAAT+CGG + chr8_4:14044844-14044863 None:intergenic 35.0%
! ATTTGCAAAAGGGAAAGTAC+CGG - chr8_4:14044869-14044888 Msa1314940:intron 35.0%
! TTGTCCTGTTCGATTTTTGA+TGG - chr8_4:14044944-14044963 Msa1314940:intron 35.0%
TTGTCCATCAAAAATCGAAC+AGG + chr8_4:14044951-14044970 None:intergenic 35.0%
!! GTTCGATTTTTGATGGACAA+TGG - chr8_4:14044951-14044970 Msa1314940:intron 35.0%
AGAAAGAGATTGTAGAGAGT+CGG - chr8_4:14045040-14045059 Msa1314940:intron 35.0%
TATGAGAGAGTGAAAATACG+AGG - chr8_4:14045198-14045217 Msa1314940:intron 35.0%
ATGAGAGAGTGAAAATACGA+GGG - chr8_4:14045199-14045218 Msa1314940:intron 35.0%
GGAACATTAACTAGAGTGAA+TGG + chr8_4:14045566-14045585 None:intergenic 35.0%
GTTCAATCTGCAAAACGAAA+AGG + chr8_4:14045686-14045705 None:intergenic 35.0%
TATGATTGTGAGACAAGCTT+AGG - chr8_4:14045829-14045848 Msa1314940:CDS 35.0%
ATGGTTTAATGCAACAGAAC+TGG + chr8_4:14045962-14045981 None:intergenic 35.0%
CTTTATCTGTGAGAAAATGC+AGG - chr8_4:14046077-14046096 Msa1314940:CDS 35.0%
! ACTTCTGCAAGAAGTTTTTG+CGG - chr8_4:14046135-14046154 Msa1314940:intron 35.0%
!! TTGAAGGGTGTAAGCTTTTT+AGG - chr8_4:14046170-14046189 Msa1314940:intron 35.0%
! TCTCTTTTGCAGTCATCTTA+TGG - chr8_4:14046292-14046311 Msa1314940:intron 35.0%
CCTTCCATTGAGAGTTAATA+TGG + chr8_4:14046356-14046375 None:intergenic 35.0%
CCATATTAACTCTCAATGGA+AGG - chr8_4:14046353-14046372 Msa1314940:intron 35.0%
GCAACCTATCAAAGTTAACT+GGG - chr8_4:14046459-14046478 Msa1314940:intron 35.0%
TATGCCCAGTTAACTTTGAT+AGG + chr8_4:14046466-14046485 None:intergenic 35.0%
GGCCATTACAACATATTTGT+TGG - chr8_4:14046603-14046622 Msa1314940:CDS 35.0%
ATGAAGCTTACGAACAACTT+TGG + chr8_4:14046683-14046702 None:intergenic 35.0%
!! AAACAACTTTGTTGGTGACT+TGG - chr8_4:14046832-14046851 Msa1314940:intron 35.0%
TTAGAGATGCAAGAGTTATG+TGG - chr8_4:14046887-14046906 Msa1314940:intron 35.0%
TAGAGATGCAAGAGTTATGT+GGG - chr8_4:14046888-14046907 Msa1314940:intron 35.0%
TAAGACAAAAATAGACCTGC+TGG + chr8_4:14046963-14046982 None:intergenic 35.0%
GTCAATGACAAGTTTCTTAC+CGG + chr8_4:14047085-14047104 None:intergenic 35.0%
ACTCCTTTGAACTGAGAATA+TGG + chr8_4:14047189-14047208 None:intergenic 35.0%
GAACTAACAAATGGTTCATC+TGG - chr8_4:14047501-14047520 Msa1314940:intron 35.0%
ATTAGGTCAAGGGTAAAAAG+AGG + chr8_4:14047647-14047666 None:intergenic 35.0%
! CCCTTGACCTAATGATTTTT+AGG - chr8_4:14047654-14047673 Msa1314940:intron 35.0%
CTGTTGTCTTAGTTAACAGA+TGG - chr8_4:14047716-14047735 Msa1314940:intron 35.0%
! ACTTTTTATCCTACAGAGGA+CGG - chr8_4:14047764-14047783 Msa1314940:intron 35.0%
CATAATGGCCAAAGTAGAAA+TGG + chr8_4:14048056-14048075 None:intergenic 35.0%
!! CTGTATCTTTGAAATCTGTG+CGG - chr8_4:14048157-14048176 Msa1314940:intron 35.0%
AAGCATGTCAATTGTCAATG+TGG + chr8_4:14048512-14048531 None:intergenic 35.0%
ATAGTCAGAGGCAATAAGAT+CGG + chr8_4:14048596-14048615 None:intergenic 35.0%
GTGTTCAAATATAGTGCTCT+TGG - chr8_4:14048620-14048639 Msa1314940:intron 35.0%
GTTCAAATATAGTGCTCTTG+GGG - chr8_4:14048622-14048641 Msa1314940:intron 35.0%
TTCAAATATAGTGCTCTTGG+GGG - chr8_4:14048623-14048642 Msa1314940:intron 35.0%
GTATGCCAAAATATCTGTTG+CGG + chr8_4:14048722-14048741 None:intergenic 35.0%
CTATTATTCTGCACATTGGT+TGG - chr8_4:14048948-14048967 Msa1314940:CDS 35.0%
! ATGTTTTCATCTCACCCATT+TGG - chr8_4:14049139-14049158 Msa1314940:five_prime_UTR 35.0%
! TGTTTTCATCTCACCCATTT+GGG - chr8_4:14049140-14049159 Msa1314940:five_prime_UTR 35.0%
! AGACTCCTCTGAGAAAATAC+CGG + chr8_4:14043565-14043584 None:intergenic 40.0%
AGGAGTCTCTTTCTGTAAGA+GGG - chr8_4:14043577-14043596 Msa1314940:three_prime_UTR 40.0%
CGAGAAGATGATCGAAGAAA+TGG + chr8_4:14043833-14043852 None:intergenic 40.0%
GCTACATAGTACAAAACCCT+AGG + chr8_4:14043919-14043938 None:intergenic 40.0%
!!! AGTGGGTATTTGGCTTTTGA+TGG - chr8_4:14044122-14044141 Msa1314940:intron 40.0%
CTTTCCCAACTAAACCTCAA+AGG + chr8_4:14044559-14044578 None:intergenic 40.0%
!! CTTTGAGGTTTAGTTGGGAA+AGG - chr8_4:14044557-14044576 Msa1314940:intron 40.0%
ACATTAACTCGTAAGCCATG+CGG + chr8_4:14044586-14044605 None:intergenic 40.0%
ATGGCTTACGAGTTAATGTC+TGG - chr8_4:14044587-14044606 Msa1314940:intron 40.0%
AACATGCGGTATTGTTTCCT+TGG - chr8_4:14044749-14044768 Msa1314940:intron 40.0%
!! GGTCCGTTTGATTTGCAAAA+GGG - chr8_4:14044859-14044878 Msa1314940:intron 40.0%
! ACTGTTTGTACCGTTTTGTC+CGG + chr8_4:14044891-14044910 None:intergenic 40.0%
GAAAGAGATTGTAGAGAGTC+GGG - chr8_4:14045041-14045060 Msa1314940:intron 40.0%
AAAGAGATTGTAGAGAGTCG+GGG - chr8_4:14045042-14045061 Msa1314940:intron 40.0%
AGAGAGAGAGAGAGAGATAA+AGG - chr8_4:14045135-14045154 Msa1314940:intron 40.0%
GAGAGAGAGAGAGAGATAAA+GGG - chr8_4:14045136-14045155 Msa1314940:intron 40.0%
AGAGAGAGAGAGAGATAAAG+GGG - chr8_4:14045137-14045156 Msa1314940:intron 40.0%
!! AGGGAGAGAATGTTTTTGAG+TGG - chr8_4:14045218-14045237 Msa1314940:intron 40.0%
ATTTGCAGAAAGTAAGGGAC+TGG + chr8_4:14045364-14045383 None:intergenic 40.0%
TGCAAATCAAACACACCCAT+AGG - chr8_4:14045377-14045396 Msa1314940:intron 40.0%
GTTTGTATTCGAACTGTGGA+TGG - chr8_4:14045429-14045448 Msa1314940:intron 40.0%
CAAGTACTTGGATCAAAACC+AGG + chr8_4:14045732-14045751 None:intergenic 40.0%
TAGACAAAACTCACACACTG+CGG + chr8_4:14045755-14045774 None:intergenic 40.0%
TGTGAGAAAATGCAGGTATG+TGG - chr8_4:14046084-14046103 Msa1314940:CDS 40.0%
GTGAGAAAATGCAGGTATGT+GGG - chr8_4:14046085-14046104 Msa1314940:CDS 40.0%
GCAAAAACTTCTTGCAGAAG+TGG + chr8_4:14046136-14046155 None:intergenic 40.0%
! CTTCTGCAAGAAGTTTTTGC+GGG - chr8_4:14046136-14046155 Msa1314940:intron 40.0%
AAAGCTTACACCCTTCAACT+GGG + chr8_4:14046168-14046187 None:intergenic 40.0%
AAAAGCTTACACCCTTCAAC+TGG + chr8_4:14046169-14046188 None:intergenic 40.0%
CTGGCCATATTAACTCTCAA+TGG - chr8_4:14046349-14046368 Msa1314940:intron 40.0%
GGCAACCTATCAAAGTTAAC+TGG - chr8_4:14046458-14046477 Msa1314940:intron 40.0%
TTATGTGGGATCAGAAGACT+GGG - chr8_4:14046902-14046921 Msa1314940:intron 40.0%
! AAAAATAGACCTGCTGGCTA+CGG + chr8_4:14046957-14046976 None:intergenic 40.0%
GTTCAAAGGAGTTGCACATT+AGG - chr8_4:14047197-14047216 Msa1314940:intron 40.0%
AAACTCGGACAGTAAAAGTG+TGG - chr8_4:14047476-14047495 Msa1314940:intron 40.0%
! AGTGTGGTGGAACTAACAAA+TGG - chr8_4:14047492-14047511 Msa1314940:intron 40.0%
GTGTATTGAGGATTGTTCTC+AGG + chr8_4:14047815-14047834 None:intergenic 40.0%
ACTGTTTATGTGGGTAACCT+TGG - chr8_4:14047836-14047855 Msa1314940:intron 40.0%
CTGTTTATGTGGGTAACCTT+GGG - chr8_4:14047837-14047856 Msa1314940:intron 40.0%
ATCGTCATTTCCATGCTCTT+GGG - chr8_4:14048247-14048266 Msa1314940:intron 40.0%
TCCAGCGTGATAAAGGATTT+GGG - chr8_4:14048295-14048314 Msa1314940:intron 40.0%
GAGATATAGTACTCATGCTG+AGG - chr8_4:14048323-14048342 Msa1314940:intron 40.0%
TTTGCCACAGAGATAAGACT+GGG + chr8_4:14048376-14048395 None:intergenic 40.0%
! TTTTGCCACAGAGATAAGAC+TGG + chr8_4:14048377-14048396 None:intergenic 40.0%
! TTTTCACCTTTTGATGTCGC+TGG - chr8_4:14048411-14048430 Msa1314940:intron 40.0%
TGAATATTGTGTGAGGAGTG+TGG - chr8_4:14048480-14048499 Msa1314940:intron 40.0%
TCGTGTATATTTCACAGCAC+GGG + chr8_4:14048541-14048560 None:intergenic 40.0%
GTCGTGTATATTTCACAGCA+CGG + chr8_4:14048542-14048561 None:intergenic 40.0%
CCAAAATATCTGTTGCGGAT+AGG + chr8_4:14048717-14048736 None:intergenic 40.0%
! CCTATCCGCAACAGATATTT+TGG - chr8_4:14048714-14048733 Msa1314940:intron 40.0%
!!! CAGATATTTTGGCATACGAG+CGG - chr8_4:14048725-14048744 Msa1314940:intron 40.0%
GAGGAGTCTCTTTCTGTAAG+AGG - chr8_4:14043576-14043595 Msa1314940:three_prime_UTR 45.0%
GATGAATATGGACCAACCTG+AGG + chr8_4:14043809-14043828 None:intergenic 45.0%
AGGGATTGCACTAAACACCT+AGG - chr8_4:14043899-14043918 Msa1314940:CDS 45.0%
GGGATTGCACTAAACACCTA+GGG - chr8_4:14043900-14043919 Msa1314940:CDS 45.0%
!! TGGCTCTGAAATTGCGTTTG+AGG - chr8_4:14044333-14044352 Msa1314940:intron 45.0%
TGTGGATGTGTTCTGCTGTT+GGG - chr8_4:14044692-14044711 Msa1314940:intron 45.0%
ATGCGGTATTGTTTCCTTGG+AGG - chr8_4:14044752-14044771 Msa1314940:intron 45.0%
!! GGGTCCGTTTGATTTGCAAA+AGG - chr8_4:14044858-14044877 Msa1314940:intron 45.0%
!! AGGGAAAGTACCGGACAAAA+CGG - chr8_4:14044878-14044897 Msa1314940:CDS 45.0%
AAGAGATTGTAGAGAGTCGG+GGG - chr8_4:14045043-14045062 Msa1314940:intron 45.0%
GAGATAAAGGGGAGAGAGAT+AGG - chr8_4:14045148-14045167 Msa1314940:intron 45.0%
ATAAAGGGGAGAGAGATAGG+AGG - chr8_4:14045151-14045170 Msa1314940:intron 45.0%
TAAAGGGGAGAGAGATAGGA+GGG - chr8_4:14045152-14045171 Msa1314940:intron 45.0%
TCATGTCCTTCGCTAAACCA+CGG + chr8_4:14045301-14045320 None:intergenic 45.0%
CAGCACAACTTCAGTTGTAC+TGG + chr8_4:14045340-14045359 None:intergenic 45.0%
GAACTGTGGATGGATGTGTT+GGG - chr8_4:14045439-14045458 Msa1314940:intron 45.0%
CAGATTGAACCAATCCCAAG+TGG - chr8_4:14045696-14045715 Msa1314940:intron 45.0%
GGCAAATTTCCACTTGGGAT+TGG + chr8_4:14045708-14045727 None:intergenic 45.0%
CAGGAGGCAAATTTCCACTT+GGG + chr8_4:14045713-14045732 None:intergenic 45.0%
GTACTTGGATCAAAACCAGG+AGG + chr8_4:14045729-14045748 None:intergenic 45.0%
AACTTCTTGCAGAAGTGGCT+CGG + chr8_4:14046131-14046150 None:intergenic 45.0%
! CAAGAAGTTTTTGCGGGTAC+TGG - chr8_4:14046142-14046161 Msa1314940:intron 45.0%
! GCATGCGAAAAGTGTAGCAT+CGG + chr8_4:14046649-14046668 None:intergenic 45.0%
!! ACTTTGTTGGTGACTTGGCA+TGG - chr8_4:14046837-14046856 Msa1314940:intron 45.0%
GTTATGTGGGATCAGAAGAC+TGG - chr8_4:14046901-14046920 Msa1314940:intron 45.0%
TTCCAAGCCACTTACCTGAA+AGG + chr8_4:14047398-14047417 None:intergenic 45.0%
TAGGCAAATACGCTGCAACT+GGG - chr8_4:14047419-14047438 Msa1314940:intron 45.0%
CTGGGGGCTTACTAAAACTT+TGG - chr8_4:14047618-14047637 Msa1314940:intron 45.0%
ATCTCTTTACCGTCCTCTGT+AGG + chr8_4:14047776-14047795 None:intergenic 45.0%
TTATGTGGGTAACCTTGGGT+CGG - chr8_4:14047841-14047860 Msa1314940:intron 45.0%
! ACGACCTTTGGTGATTCTAC+AGG - chr8_4:14048206-14048225 Msa1314940:intron 45.0%
GTTGCCTGTAGAATCACCAA+AGG + chr8_4:14048213-14048232 None:intergenic 45.0%
! CAAGAGCATGGAAATGACGA+TGG + chr8_4:14048248-14048267 None:intergenic 45.0%
CATCGTCATTTCCATGCTCT+TGG - chr8_4:14048246-14048265 Msa1314940:intron 45.0%
TCGTCATTTCCATGCTCTTG+GGG - chr8_4:14048248-14048267 Msa1314940:intron 45.0%
GTCCAGCGTGATAAAGGATT+TGG - chr8_4:14048294-14048313 Msa1314940:intron 45.0%
ACCCAAATCCTTTATCACGC+TGG + chr8_4:14048299-14048318 None:intergenic 45.0%
! AATGCCCAGTCTTATCTCTG+TGG - chr8_4:14048369-14048388 Msa1314940:intron 45.0%
! AGAGGATTTGAAGCAGTTCC+AGG + chr8_4:14048664-14048683 None:intergenic 45.0%
CAGCTAGCAATGAGCAAGAT+GGG - chr8_4:14048748-14048767 Msa1314940:intron 45.0%
TTAAGAGGATGCTGTGCTTG+AGG + chr8_4:14048799-14048818 None:intergenic 45.0%
! CCAATTGCAGCTTGCTTAAG+AGG + chr8_4:14048814-14048833 None:intergenic 45.0%
CCTCTTAAGCAAGCTGCAAT+TGG - chr8_4:14048811-14048830 Msa1314940:intron 45.0%
!!! AAAATTTAATTTTTTTTTAG+TGG - chr8_4:14044104-14044123 Msa1314940:intron 5.0%
!!! AAATTTAATTTTTTTTTAGT+GGG - chr8_4:14044105-14044124 Msa1314940:intron 5.0%
! GTCCTCCGGTATTTTCTCAG+AGG - chr8_4:14043557-14043576 Msa1314940:three_prime_UTR 50.0%
! CTCCTCTGAGAAAATACCGG+AGG + chr8_4:14043562-14043581 None:intergenic 50.0%
TGTAAGAGGGTCACTGCGTA+GGG - chr8_4:14043590-14043609 Msa1314940:three_prime_UTR 50.0%
CAACAGTCTCTCTATCACCC+TGG - chr8_4:14043770-14043789 Msa1314940:three_prime_UTR 50.0%
GAATATGGACCAACCTGAGG+TGG + chr8_4:14043806-14043825 None:intergenic 50.0%
AGTTGGGAAAGGAATCCGCA+TGG - chr8_4:14044568-14044587 Msa1314940:intron 50.0%
CTGTGGATGTGTTCTGCTGT+TGG - chr8_4:14044691-14044710 Msa1314940:intron 50.0%
GAGAACGAGAGACGTGAGAT+AGG - chr8_4:14045090-14045109 Msa1314940:intron 50.0%
! CGGGACAACTTTTTGTCCCA+AGG + chr8_4:14045281-14045300 None:intergenic 50.0%
TGGGACAAAAAGTTGTCCCG+TGG - chr8_4:14045281-14045300 Msa1314940:CDS 50.0%
CATGTCCTTCGCTAAACCAC+GGG + chr8_4:14045300-14045319 None:intergenic 50.0%
CGAACTGTGGATGGATGTGT+TGG - chr8_4:14045438-14045457 Msa1314940:intron 50.0%
CCAGGAGGCAAATTTCCACT+TGG + chr8_4:14045714-14045733 None:intergenic 50.0%
CCAAGTGGAAATTTGCCTCC+TGG - chr8_4:14045711-14045730 Msa1314940:intron 50.0%
!! GTGGCTCGGTTACTTGTGTA+TGG + chr8_4:14046117-14046136 None:intergenic 50.0%
GTTAACTGGGCATATGCCAG+TGG - chr8_4:14046472-14046491 Msa1314940:intron 50.0%
ATATGCCAGTGGTCAGAGAG+AGG - chr8_4:14046483-14046502 Msa1314940:intron 50.0%
TGTATCCTCTCTCTGACCAC+TGG + chr8_4:14046491-14046510 None:intergenic 50.0%
GGTCAGAGAGAGGATACATC+AGG - chr8_4:14046493-14046512 Msa1314940:intron 50.0%
!! AGTGTAGCATCGGTAACCTC+AGG + chr8_4:14046639-14046658 None:intergenic 50.0%
ATCAGAAGACTGGGCGATCA+AGG - chr8_4:14046911-14046930 Msa1314940:intron 50.0%
TCAGAAGACTGGGCGATCAA+GGG - chr8_4:14046912-14046931 Msa1314940:intron 50.0%
TGTTTCATTCCGTAGCCAGC+AGG - chr8_4:14046945-14046964 Msa1314940:intron 50.0%
ATGTCCTGTCTGTGCCTTTC+AGG - chr8_4:14047381-14047400 Msa1314940:intron 50.0%
! CTTACCTGAAAGGCACAGAC+AGG + chr8_4:14047388-14047407 None:intergenic 50.0%
! GTCTGTGCCTTTCAGGTAAG+TGG - chr8_4:14047388-14047407 Msa1314940:intron 50.0%
! TGCCTTTCAGGTAAGTGGCT+TGG - chr8_4:14047393-14047412 Msa1314940:intron 50.0%
! CAGGTAAGTGGCTTGGAAGT+AGG - chr8_4:14047400-14047419 Msa1314940:intron 50.0%
GTAGGCAAATACGCTGCAAC+TGG - chr8_4:14047418-14047437 Msa1314940:intron 50.0%
! AACTGGGCAACAAAAGGTGC+TGG - chr8_4:14047435-14047454 Msa1314940:intron 50.0%
! CTCGGACAGTAAAAGTGTGG+TGG - chr8_4:14047479-14047498 Msa1314940:intron 50.0%
AGTTTCTTACCTCCGACCCA+AGG + chr8_4:14047856-14047875 None:intergenic 50.0%
GTTCGTGTCCAGCGTGATAA+AGG - chr8_4:14048288-14048307 Msa1314940:intron 50.0%
! GCAGCTCTGGCAATTCAGAT+GGG - chr8_4:14048345-14048364 Msa1314940:intron 50.0%
AGTGAGCCAGCGACATCAAA+AGG + chr8_4:14048420-14048439 None:intergenic 50.0%
! GGATTTGAAGCAGTTCCAGG+TGG + chr8_4:14048661-14048680 None:intergenic 50.0%
ATATCTGTTGCGGATAGGCC+TGG + chr8_4:14048712-14048731 None:intergenic 50.0%
GCAGCTAGCAATGAGCAAGA+TGG - chr8_4:14048747-14048766 Msa1314940:intron 50.0%
CTAGCAATGAGCAAGATGGG+TGG - chr8_4:14048751-14048770 Msa1314940:intron 50.0%
! GCTGTGCAGCAGCAACATTT+TGG + chr8_4:14048867-14048886 None:intergenic 50.0%
!! AGTCGGCAAGGGTTTTAGCG+TGG - chr8_4:14043533-14043552 Msa1314940:three_prime_UTR 55.0%
!! GGTTTTAGCGTGGAGTCCTC+CGG - chr8_4:14043543-14043562 Msa1314940:three_prime_UTR 55.0%
CTGTAAGAGGGTCACTGCGT+AGG - chr8_4:14043589-14043608 Msa1314940:three_prime_UTR 55.0%
GAGGTGGAGCTAAGAGACCA+GGG + chr8_4:14043790-14043809 None:intergenic 55.0%
TGAGGTGGAGCTAAGAGACC+AGG + chr8_4:14043791-14043810 None:intergenic 55.0%
TGGTCTCTTAGCTCCACCTC+AGG - chr8_4:14043790-14043809 Msa1314940:three_prime_UTR 55.0%
CTCTTAGCTCCACCTCAGGT+TGG - chr8_4:14043794-14043813 Msa1314940:three_prime_UTR 55.0%
GGGGAGAGAGAGAGAGATAG+AGG - chr8_4:14045062-14045081 Msa1314940:intron 55.0%
GAGAGATAGGAGGGAGAGAG+AGG - chr8_4:14045161-14045180 Msa1314940:intron 55.0%
GATAGGAGGGAGAGAGAGGA+AGG - chr8_4:14045165-14045184 Msa1314940:intron 55.0%
GTTGTCCCGTGGTTTAGCGA+AGG - chr8_4:14045292-14045311 Msa1314940:CDS 55.0%
CACACACTGCGGCAAGTACT+TGG + chr8_4:14045744-14045763 None:intergenic 55.0%
!! TGTTGGTGACCTCAGTCCTG+AGG - chr8_4:14046620-14046639 Msa1314940:CDS 55.0%
CATCGGTAACCTCAGGACTG+AGG + chr8_4:14046632-14046651 None:intergenic 55.0%
CAGAAGACTGGGCGATCAAG+GGG - chr8_4:14046913-14046932 Msa1314940:intron 55.0%
ACTGGGCGATCAAGGGGATT+TGG - chr8_4:14046919-14046938 Msa1314940:intron 55.0%
CGCTGCAACTGGGCAACAAA+AGG - chr8_4:14047429-14047448 Msa1314940:intron 55.0%
!! TGGGCAACAAAAGGTGCTGG+CGG - chr8_4:14047438-14047457 Msa1314940:intron 55.0%
CATTTCCATGCTCTTGGGGC+TGG - chr8_4:14048252-14048271 Msa1314940:intron 55.0%
! TCTTGGGGCTGGTGTGATAG+AGG - chr8_4:14048263-14048282 Msa1314940:intron 55.0%
TACTCATGCTGAGGCAGCTC+TGG - chr8_4:14048332-14048351 Msa1314940:intron 55.0%
! GGCAGCTCTGGCAATTCAGA+TGG - chr8_4:14048344-14048363 Msa1314940:intron 55.0%
GAAGCAGTTCCAGGTGGAGT+GGG + chr8_4:14048655-14048674 None:intergenic 55.0%
TGAAGCAGTTCCAGGTGGAG+TGG + chr8_4:14048656-14048675 None:intergenic 55.0%
AGCTGCAATTGGAGCAAGCC+AGG - chr8_4:14048822-14048841 Msa1314940:intron 55.0%
GCAAGCCAGGCGATATACGA+CGG - chr8_4:14048835-14048854 Msa1314940:intron 55.0%
CAAGCCAGGCGATATACGAC+GGG - chr8_4:14048836-14048855 Msa1314940:intron 55.0%
AAGCCAGGCGATATACGACG+GGG - chr8_4:14048837-14048856 Msa1314940:intron 55.0%
GATGGATGTGTTGGGTGCCC+TGG - chr8_4:14045447-14045466 Msa1314940:intron 60.0%
!! CGGGTACTGGCCCAGTTGAA+GGG - chr8_4:14046155-14046174 Msa1314940:intron 60.0%
CGATCGCAGATCTGCTGCTC+TGG - chr8_4:14046330-14046349 Msa1314940:intron 60.0%
TGTGGGTAACCTTGGGTCGG+AGG - chr8_4:14047844-14047863 Msa1314940:intron 60.0%
TCACACCAGCCCCAAGAGCA+TGG + chr8_4:14048260-14048279 None:intergenic 60.0%
GTTGCGGATAGGCCTGGTAG+AGG + chr8_4:14048706-14048725 None:intergenic 60.0%
AGCCAGGCGATATACGACGG+GGG - chr8_4:14048838-14048857 Msa1314940:intron 60.0%
!! GCGGGTACTGGCCCAGTTGA+AGG - chr8_4:14046154-14046173 Msa1314940:intron 65.0%
! TAGAGGCGCAGCAGCAGGTG+GGG + chr8_4:14048689-14048708 None:intergenic 65.0%
! GTAGAGGCGCAGCAGCAGGT+GGG + chr8_4:14048690-14048709 None:intergenic 65.0%
GCCAGGCGATATACGACGGG+GGG - chr8_4:14048839-14048858 Msa1314940:intron 65.0%
ACCCCCCGTCGTATATCGCC+TGG + chr8_4:14048843-14048862 None:intergenic 65.0%
GGGAGCAAGCCCACTCCACC+TGG - chr8_4:14048643-14048662 Msa1314940:intron 70.0%
GCAGCAGCAGGTGGGGGAAG+AGG + chr8_4:14048682-14048701 None:intergenic 70.0%
! AGAGGCGCAGCAGCAGGTGG+GGG + chr8_4:14048688-14048707 None:intergenic 70.0%
! GGTAGAGGCGCAGCAGCAGG+TGG + chr8_4:14048691-14048710 None:intergenic 70.0%
! CCTGGTAGAGGCGCAGCAGC+AGG + chr8_4:14048694-14048713 None:intergenic 70.0%
CCTGCTGCTGCGCCTCTACC+AGG - chr8_4:14048691-14048710 Msa1314940:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 14043508 14049234 14043508 ID=Msa1314940;Name=Msa1314940
chr8_4 mRNA 14043508 14049234 14043508 ID=Msa1314940-mRNA-1;Parent=Msa1314940;Name=Msa1314940-mRNA-1;_AED=0.11;_eAED=0.11;_QI=175|1|1|1|1|1|12|328|427
chr8_4 exon 14043508 14044108 14043508 ID=Msa1314940-mRNA-1:exon:5283;Parent=Msa1314940-mRNA-1
chr8_4 exon 14044338 14044514 14044338 ID=Msa1314940-mRNA-1:exon:5282;Parent=Msa1314940-mRNA-1
chr8_4 exon 14044877 14044962 14044877 ID=Msa1314940-mRNA-1:exon:5281;Parent=Msa1314940-mRNA-1
chr8_4 exon 14045220 14045339 14045220 ID=Msa1314940-mRNA-1:exon:5280;Parent=Msa1314940-mRNA-1
chr8_4 exon 14045658 14045688 14045658 ID=Msa1314940-mRNA-1:exon:5279;Parent=Msa1314940-mRNA-1
chr8_4 exon 14045776 14045851 14045776 ID=Msa1314940-mRNA-1:exon:5278;Parent=Msa1314940-mRNA-1
chr8_4 exon 14046051 14046138 14046051 ID=Msa1314940-mRNA-1:exon:5277;Parent=Msa1314940-mRNA-1
chr8_4 exon 14046228 14046289 14046228 ID=Msa1314940-mRNA-1:exon:5276;Parent=Msa1314940-mRNA-1
chr8_4 exon 14046362 14046438 14046362 ID=Msa1314940-mRNA-1:exon:5275;Parent=Msa1314940-mRNA-1
chr8_4 exon 14046541 14046643 14046541 ID=Msa1314940-mRNA-1:exon:5274;Parent=Msa1314940-mRNA-1
chr8_4 exon 14046982 14047043 14046982 ID=Msa1314940-mRNA-1:exon:5273;Parent=Msa1314940-mRNA-1
chr8_4 exon 14048931 14049234 14048931 ID=Msa1314940-mRNA-1:exon:5272;Parent=Msa1314940-mRNA-1
chr8_4 five_prime_UTR 14049060 14049234 14049060 ID=Msa1314940-mRNA-1:five_prime_utr;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14048931 14049059 14048931 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14046982 14047043 14046982 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14046541 14046643 14046541 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14046362 14046438 14046362 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14046228 14046289 14046228 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14046051 14046138 14046051 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14045776 14045851 14045776 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14045658 14045688 14045658 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14045220 14045339 14045220 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14044877 14044962 14044877 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14044338 14044514 14044338 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 CDS 14043836 14044108 14043836 ID=Msa1314940-mRNA-1:cds;Parent=Msa1314940-mRNA-1
chr8_4 three_prime_UTR 14043508 14043835 14043508 ID=Msa1314940-mRNA-1:three_prime_utr;Parent=Msa1314940-mRNA-1
Gene Sequence

>Msa1314940

ATGCAGAATCATAGGTTGAAGCAACAGCAACATCAGCAGCAGCAACAACAACAACAAGCTATGATGCAACAAGCTGCTCTTCTTCAACAACAGTCTCTCTATCACCCTGGTCTCTTAGCTCCACCTCAGATTGAACCAATCCCAAGTGGAAATTTGCCTCCTGGTTTTGATCCAAGTACTTGCCGCAGTGTGTATGTGGGCAATGTCCATACACAAGTAACCGAGCCACTTCTGCAAGAAGTTTTTGCGGGTACTGGCCCAGTTGAAGGGTGTAAGCTTTTTAGGAAAGAGAAGTCATCTTATGGATTCATTCATTACTTCGATCGCAGATCTGCTGCTCTGGCCATATTAACTCTCAATGGAAGGCATCTATTCGGGCAACCTATCAAAGTTAACTGGGCATATGCCAGTGGTCAGAGAGAGGATACATCAGGCCATTACAACATATTTGTTGGTGACCTCAGTCCTGAGGTTACCGATGCTACACTTTTCGCATGCTTTTCTGTCTACCAAAGTTGTTCAGATGCAAGAGTTATGTGGGATCAGAAGACTGGGCGATCAAGGGGATTTGGATTTGTTTCATTCCGTAGCCAGCAGGATGCTCAAAGTGCTATAAATGATTTGACCGGTAAGTGGCTTGGAAGTAGGCAAATACGCTGCAACTGGGCAACAAAAGGTGCTGGCGGTATTGAAGAGAAGCAAAACTCGGACAGTAAAAGTGTGGTGGAACTAACAAATGGTTCATCTGAGGACGGTAAAGAGATATCTAGCAATGATGTTCCTGAGAACAATCCTCAATACACAACTGTTTATGTGGGTAACCTTGGGTCGGAGGCAACACAGCTTGATCTCCATCGTCATTTCCATGCTCTTGGGGCTGGTGTGATAGAGGAAGTTCGTGTCCAGCGTGATAAAGGATTTGGGTTTGTGAGATATAGTACTCATGCTGAGGCAGCTCTGGCAATTCAGATGGGAAATGCCCAGTCTTATCTCTGTGGCAAAATAATTAAGTGCTCTTGGGGGAGCAAGCCCACTCCACCTGGAACTGCTTCAAATCCTCTTCCCCCACCTGCTGCTGCGCCTCTACCAGGCCTATCCGCAACAGATATTTTGGCATACGAGCGGCAGCTAGCAATGAGCAAGATGGGTGGAGTTCATGCTGCGTTGATGCATCCTCAAGCACAGCATCCTCTTAAGCAAGCTGCAATTGGAGCAAGCCAGGCGATATACGACGGGGGGTTCCAAAATGTTGCTGCTGCACAGCAAATGATGTATTATCAGTAA
Protein sequence

>Msa1314940

MQNHRLKQQQHQQQQQQQQAMMQQAALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSSYGFIHYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGAGGIEEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKCSWGSKPTPPGTASNPLPPPAAAPLPGLSATDILAYERQLAMSKMGGVHAALMHPQAQHPLKQAAIGASQAIYDGGFQNVAAAQQMMYYQ*