Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014770 | sp|Q9LHE3|ASPG2_ARATH | 60.626 | 447 | 171 | 4 | 29 | 473 | 27 | 470 | 0.0 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0014770 | 0.821360 | 4.209539e-53 | -8.615850e-47 |
| Msa0014770 | Msa0025160 | 0.855240 | 7.203562e-62 | -8.615850e-47 |
| Msa0014770 | Msa0025580 | 0.802654 | 5.064034e-49 | -8.615850e-47 |
| Msa0014770 | Msa0032460 | 0.844525 | 7.162077e-59 | -8.615850e-47 |
| Msa0014770 | Msa0032980 | 0.801365 | 9.318664e-49 | -8.615850e-47 |
| Msa0014770 | Msa0035270 | 0.829470 | 5.056939e-55 | -8.615850e-47 |
| Msa0014770 | Msa0035340 | 0.803323 | 3.682402e-49 | -8.615850e-47 |
| Msa0014770 | Msa0035380 | 0.803361 | 3.616398e-49 | -8.615850e-47 |
| Msa0014770 | Msa0037740 | 0.842695 | 2.210130e-58 | -8.615850e-47 |
| Msa0014770 | Msa0042640 | 0.804330 | 2.274674e-49 | -8.615850e-47 |
| Msa0014770 | Msa0050150 | 0.801971 | 6.999299e-49 | -8.615850e-47 |
| Msa0014770 | Msa0072520 | 0.842572 | 2.382991e-58 | -8.615850e-47 |
| Msa0014770 | Msa0080610 | 0.819667 | 1.029895e-52 | -8.615850e-47 |
| Msa0014770 | Msa0091350 | 0.812973 | 3.237028e-51 | -8.615850e-47 |
| Msa0014770 | Msa0108630 | 0.844549 | 7.057888e-59 | -8.615850e-47 |
| Msa0014770 | Msa0115550 | 0.841229 | 5.392779e-58 | -8.615850e-47 |
| Msa0014770 | Msa0121330 | 0.815729 | 7.965130e-52 | -8.615850e-47 |
| Msa0014770 | Msa0126210 | 0.807356 | 5.261036e-50 | -8.615850e-47 |
| Msa0014770 | Msa0129380 | 0.803562 | 3.285002e-49 | -8.615850e-47 |
| Msa0014770 | Msa0146650 | 0.834384 | 3.091758e-56 | -8.615850e-47 |
| Msa0014770 | Msa0154620 | 0.873074 | 1.949152e-67 | -8.615850e-47 |
| Msa0014770 | Msa0161930 | 0.831664 | 1.468166e-55 | -8.615850e-47 |
| Msa0014770 | Msa0166170 | 0.814001 | 1.924021e-51 | -8.615850e-47 |
| Msa0014770 | Msa0173290 | 0.822186 | 2.710596e-53 | -8.615850e-47 |
| Msa0014770 | Msa0176060 | 0.833799 | 4.333585e-56 | -8.615850e-47 |
| Msa0014770 | Msa0185960 | 0.840570 | 8.031270e-58 | -8.615850e-47 |
| Msa0014770 | Msa0203080 | 0.806474 | 8.083081e-50 | -8.615850e-47 |
| Msa0014770 | Msa0213610 | 0.866893 | 2.043055e-65 | -8.615850e-47 |
| Msa0014770 | Msa0284800 | 0.811878 | 5.617694e-51 | -8.615850e-47 |
| Msa0014770 | Msa0293040 | 0.861011 | 1.383766e-63 | -8.615850e-47 |
| Msa0014770 | Msa0330520 | 0.829908 | 3.956645e-55 | -8.615850e-47 |
| Msa0014770 | Msa0331110 | 0.808467 | 3.052862e-50 | -8.615850e-47 |
| Msa0014770 | Msa0380670 | 0.801485 | 8.806142e-49 | -8.615850e-47 |
| Msa0014770 | Msa0381730 | 0.838958 | 2.110717e-57 | -8.615850e-47 |
| Msa0014770 | Msa0401060 | 0.815425 | 9.307090e-52 | -8.615850e-47 |
| Msa0014770 | Msa0421130 | 0.800470 | 1.419589e-48 | -8.615850e-47 |
| Msa0014770 | Msa0426530 | 0.806546 | 7.805276e-50 | -8.615850e-47 |
| Msa0014770 | Msa0430300 | 0.801238 | 9.892942e-49 | -8.615850e-47 |
| Msa0014770 | Msa0430480 | 0.800884 | 1.169085e-48 | -8.615850e-47 |
| Msa0014770 | Msa0431200 | 0.856735 | 2.631948e-62 | -8.615850e-47 |
| Msa0014770 | Msa0432010 | 0.812391 | 4.340334e-51 | -8.615850e-47 |
| Msa0014770 | Msa0443570 | 0.800301 | 1.536664e-48 | -8.615850e-47 |
| Msa0014770 | Msa0457570 | 0.810879 | 9.254347e-51 | -8.615850e-47 |
| Msa0014770 | Msa0468700 | 0.817285 | 3.569488e-52 | -8.615850e-47 |
| Msa0014770 | Msa0476280 | 0.825504 | 4.521343e-54 | -8.615850e-47 |
| Msa0014770 | Msa0481890 | 0.802509 | 5.424311e-49 | -8.615850e-47 |
| Msa0014770 | Msa0484570 | 0.860440 | 2.062772e-63 | -8.615850e-47 |
| Msa0014770 | Msa0500920 | 0.800320 | 1.523475e-48 | -8.615850e-47 |
| Msa0014770 | Msa0514580 | 0.810597 | 1.065252e-50 | -8.615850e-47 |
| Msa0014770 | Msa0517250 | 0.833367 | 5.554005e-56 | -8.615850e-47 |
| Msa0014770 | Msa0520260 | 0.869120 | 3.926683e-66 | -8.615850e-47 |
| Msa0014770 | Msa0520870 | 0.813330 | 2.703585e-51 | -8.615850e-47 |
| Msa0014770 | Msa0521510 | 0.811877 | 5.619076e-51 | -8.615850e-47 |
| Msa0014770 | Msa0553750 | 0.807382 | 5.193688e-50 | -8.615850e-47 |
| Msa0014770 | Msa0567170 | 0.807729 | 4.385369e-50 | -8.615850e-47 |
| Msa0014770 | Msa0570010 | 0.820393 | 7.022853e-53 | -8.615850e-47 |
| Msa0014770 | Msa0590200 | 0.832721 | 8.042784e-56 | -8.615850e-47 |
| Msa0014770 | Msa0607800 | 0.838566 | 2.664608e-57 | -8.615850e-47 |
| Msa0014770 | Msa0619710 | 0.835087 | 2.057962e-56 | -8.615850e-47 |
| Msa0014770 | Msa0620500 | 0.809563 | 1.778824e-50 | -8.615850e-47 |
| Msa0014770 | Msa0647050 | 0.800976 | 1.119075e-48 | -8.615850e-47 |
| Msa0014770 | Msa0648040 | 0.838573 | 2.653366e-57 | -8.615850e-47 |
| Msa0014770 | Msa0668900 | 0.800175 | 1.630570e-48 | -8.615850e-47 |
| Msa0014770 | Msa0687090 | 0.848776 | 4.939888e-60 | -8.615850e-47 |
| Msa0014770 | Msa0688380 | 0.805845 | 1.096573e-49 | -8.615850e-47 |
| Msa0014770 | Msa0690740 | 0.843304 | 1.521167e-58 | -8.615850e-47 |
| Msa0014770 | Msa0698730 | 0.826807 | 2.214894e-54 | -8.615850e-47 |
| Msa0014770 | Msa0703600 | 0.802201 | 6.278643e-49 | -8.615850e-47 |
| Msa0014770 | Msa0703950 | 0.812079 | 5.078241e-51 | -8.615850e-47 |
| Msa0014770 | Msa0706150 | 0.827489 | 1.520964e-54 | -8.615850e-47 |
| Msa0014770 | Msa0709200 | 0.803915 | 2.775019e-49 | -8.615850e-47 |
| Msa0014770 | Msa0709440 | 0.804467 | 2.129989e-49 | -8.615850e-47 |
| Msa0014770 | Msa0714520 | 0.809283 | 2.042389e-50 | -8.615850e-47 |
| Msa0014770 | Msa0716480 | 0.851128 | 1.085859e-60 | -8.615850e-47 |
| Msa0014770 | Msa0730930 | 0.800790 | 1.221368e-48 | -8.615850e-47 |
| Msa0014770 | Msa0733080 | 0.802773 | 4.785802e-49 | -8.615850e-47 |
| Msa0014770 | Msa0740710 | 0.803986 | 2.682630e-49 | -8.615850e-47 |
| Msa0014770 | Msa0747000 | 0.804525 | 2.071558e-49 | -8.615850e-47 |
| Msa0014770 | Msa0752780 | 0.817973 | 2.497218e-52 | -8.615850e-47 |
| Msa0014770 | Msa0757100 | 0.808230 | 3.429300e-50 | -8.615850e-47 |
| Msa0014770 | Msa0758650 | 0.824160 | 9.383060e-54 | -8.615850e-47 |
| Msa0014770 | Msa0780910 | 0.817812 | 2.715810e-52 | -8.615850e-47 |
| Msa0014770 | Msa0798080 | 0.807891 | 4.050105e-50 | -8.615850e-47 |
| Msa0014770 | Msa0811690 | 0.837101 | 6.337991e-57 | -8.615850e-47 |
| Msa0014770 | Msa0821160 | 0.805822 | 1.108575e-49 | -8.615850e-47 |
| Msa0014770 | Msa0836330 | 0.800760 | 1.238724e-48 | -8.615850e-47 |
| Msa0014770 | Msa0837460 | 0.856152 | 3.902897e-62 | -8.615850e-47 |
| Msa0014770 | Msa0851850 | 0.805149 | 1.534591e-49 | -8.615850e-47 |
| Msa0014770 | Msa0894790 | 0.804728 | 1.879423e-49 | -8.615850e-47 |
| Msa0014770 | Msa0909760 | 0.813720 | 2.218756e-51 | -8.615850e-47 |
| Msa0014770 | Msa0994720 | 0.803345 | 3.644591e-49 | -8.615850e-47 |
| Msa0014770 | Msa1002640 | 0.834935 | 2.248077e-56 | -8.615850e-47 |
| Msa0014770 | Msa1033920 | 0.802545 | 5.331137e-49 | -8.615850e-47 |
| Msa0014770 | Msa1034600 | 0.814131 | 1.801086e-51 | -8.615850e-47 |
| Msa0014770 | Msa1042160 | 0.840850 | 6.782941e-58 | -8.615850e-47 |
| Msa0014770 | Msa1042190 | 0.840407 | 8.859134e-58 | -8.615850e-47 |
| Msa0014770 | Msa1072960 | 0.801497 | 8.757514e-49 | -8.615850e-47 |
| Msa0014770 | Msa1076020 | 0.817373 | 3.410790e-52 | -8.615850e-47 |
| Msa0014770 | Msa1078880 | 0.816159 | 6.382975e-52 | -8.615850e-47 |
| Msa0014770 | Msa1078970 | 0.808696 | 2.728496e-50 | -8.615850e-47 |
| Msa0014770 | Msa1080000 | 0.832514 | 9.050289e-56 | -8.615850e-47 |
| Msa0014770 | Msa1084530 | 0.808708 | 2.712462e-50 | -8.615850e-47 |
| Msa0014770 | Msa1104110 | 0.847903 | 8.612965e-60 | -8.615850e-47 |
| Msa0014770 | Msa1109390 | 0.830458 | 2.903860e-55 | -8.615850e-47 |
| Msa0014770 | Msa1123210 | 0.804648 | 1.953298e-49 | -8.615850e-47 |
| Msa0014770 | Msa1125820 | 0.810702 | 1.010669e-50 | -8.615850e-47 |
| Msa0014770 | Msa1125990 | 0.806228 | 9.109404e-50 | -8.615850e-47 |
| Msa0014770 | Msa1132530 | 0.829410 | 5.230231e-55 | -8.615850e-47 |
| Msa0014770 | Msa1147700 | 0.844942 | 5.529221e-59 | -8.615850e-47 |
| Msa0014770 | Msa1161970 | 0.819723 | 1.000035e-52 | -8.615850e-47 |
| Msa0014770 | Msa1163180 | 0.807138 | 5.852461e-50 | -8.615850e-47 |
| Msa0014770 | Msa1166190 | 0.820496 | 6.650901e-53 | -8.615850e-47 |
| Msa0014770 | Msa1166290 | 0.817625 | 2.993082e-52 | -8.615850e-47 |
| Msa0014770 | Msa1167470 | 0.853756 | 1.936122e-61 | -8.615850e-47 |
| Msa0014770 | Msa1169190 | 0.817868 | 2.637151e-52 | -8.615850e-47 |
| Msa0014770 | Msa1171290 | 0.803586 | 3.247640e-49 | -8.615850e-47 |
| Msa0014770 | Msa1194240 | 0.802782 | 4.765558e-49 | -8.615850e-47 |
| Msa0014770 | Msa1201780 | 0.820873 | 5.447933e-53 | -8.615850e-47 |
| Msa0014770 | Msa1213830 | 0.828498 | 8.695102e-55 | -8.615850e-47 |
| Msa0014770 | Msa1214350 | 0.810000 | 1.432386e-50 | -8.615850e-47 |
| Msa0014770 | Msa1215980 | 0.810906 | 9.131393e-51 | -8.615850e-47 |
| Msa0014770 | Msa1216090 | 0.832055 | 1.176022e-55 | -8.615850e-47 |
| Msa0014770 | Msa1216110 | 0.808294 | 3.324343e-50 | -8.615850e-47 |
| Msa0014770 | Msa1216340 | 0.836379 | 9.686001e-57 | -8.615850e-47 |
| Msa0014770 | Msa1219930 | 0.827465 | 1.541440e-54 | -8.615850e-47 |
| Msa0014770 | Msa1240770 | 0.808644 | 2.798731e-50 | -8.615850e-47 |
| Msa0014770 | Msa1254540 | 0.817675 | 2.915774e-52 | -8.615850e-47 |
| Msa0014770 | Msa1262570 | 0.806325 | 8.688218e-50 | -8.615850e-47 |
| Msa0014770 | Msa1262590 | 0.852524 | 4.363264e-61 | -8.615850e-47 |
| Msa0014770 | Msa1277110 | 0.804217 | 2.401813e-49 | -8.615850e-47 |
| Msa0014770 | Msa1294790 | 0.807469 | 4.979560e-50 | -8.615850e-47 |
| Msa0014770 | Msa1300460 | 0.801077 | 1.067222e-48 | -8.615850e-47 |
| Msa0014770 | Msa1301980 | 0.809149 | 2.182146e-50 | -8.615850e-47 |
| Msa0014770 | Msa1302000 | 0.826495 | 2.628656e-54 | -8.615850e-47 |
| Msa0014770 | Msa1306570 | 0.813590 | 2.369505e-51 | -8.615850e-47 |
| Msa0014770 | Msa1314940 | 0.810292 | 1.239143e-50 | -8.615850e-47 |
| Msa0014770 | Msa1332950 | 0.805176 | 1.514678e-49 | -8.615850e-47 |
| Msa0014770 | Msa1342810 | 0.807660 | 4.535517e-50 | -8.615850e-47 |
| Msa0014770 | Msa1349690 | 0.852765 | 3.724901e-61 | -8.615850e-47 |
| Msa0014770 | Msa1358290 | 0.842375 | 2.687132e-58 | -8.615850e-47 |
| Msa0014770 | Msa1363010 | 0.810361 | 1.197858e-50 | -8.615850e-47 |
| Msa0014770 | Msa1368750 | 0.811896 | 5.566596e-51 | -8.615850e-47 |
| Msa0014770 | Msa1374790 | 0.817701 | 2.877299e-52 | -8.615850e-47 |
| Msa0014770 | Msa1375350 | 0.814332 | 1.626060e-51 | -8.615850e-47 |
| Msa0014770 | Msa1383310 | 0.841545 | 4.453788e-58 | -8.615850e-47 |
| Msa0014770 | Msa1392740 | 0.847513 | 1.103023e-59 | -8.615850e-47 |
| Msa0014770 | Msa1393780 | 0.834095 | 3.652836e-56 | -8.615850e-47 |
| Msa0014770 | Msa1407840 | 0.837719 | 4.402405e-57 | -8.615850e-47 |
| Msa0014770 | Msa1408160 | 0.811523 | 6.710668e-51 | -8.615850e-47 |
| Msa0014770 | Msa1409410 | 0.832223 | 1.068533e-55 | -8.615850e-47 |
| Msa0014770 | Msa1410160 | 0.831434 | 1.673423e-55 | -8.615850e-47 |
| Msa0014770 | Msa1411790 | 0.813216 | 2.863063e-51 | -8.615850e-47 |
| Msa0014770 | Msa1426320 | 0.815149 | 1.071677e-51 | -8.615850e-47 |
| Msa0014770 | Msa1431480 | 0.800687 | 1.282127e-48 | -8.615850e-47 |
| Msa0014770 | Msa1437810 | 0.835269 | 1.851479e-56 | -8.615850e-47 |
| Msa0014770 | Msa1451820 | 0.819659 | 1.033895e-52 | -8.615850e-47 |
| Msa0014770 | Msa1454500 | 0.821073 | 4.901522e-53 | -8.615850e-47 |
| Msa0014770 | Msa1462490 | 0.819964 | 8.809791e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014770 | MtrunA17_Chr1g0165201 | 96.195 | 473 | 14 | 2 | 1 | 473 | 1 | 469 | 0.0 | 927 |
| Msa0014770 | MtrunA17_Chr1g0212321 | 64.516 | 465 | 140 | 7 | 26 | 473 | 30 | 486 | 0.0 | 577 |
| Msa0014770 | MtrunA17_Chr1g0210201 | 48.861 | 395 | 189 | 4 | 79 | 473 | 86 | 467 | 1.23e-124 | 371 |
| Msa0014770 | MtrunA17_Chr7g0275731 | 43.319 | 464 | 237 | 8 | 13 | 473 | 44 | 484 | 1.90e-117 | 353 |
| Msa0014770 | MtrunA17_Chr6g0484901 | 41.449 | 497 | 254 | 13 | 2 | 473 | 7 | 491 | 1.23e-106 | 325 |
| Msa0014770 | MtrunA17_Chr3g0130931 | 37.788 | 434 | 239 | 13 | 50 | 473 | 36 | 448 | 4.98e-84 | 266 |
| Msa0014770 | MtrunA17_Chr8g0390761 | 37.209 | 344 | 210 | 4 | 125 | 466 | 109 | 448 | 1.22e-78 | 252 |
| Msa0014770 | MtrunA17_Chr4g0001991 | 33.252 | 412 | 252 | 7 | 75 | 473 | 116 | 517 | 7.00e-69 | 228 |
| Msa0014770 | MtrunA17_Chr5g0435871 | 33.179 | 431 | 245 | 14 | 59 | 473 | 31 | 434 | 4.81e-67 | 221 |
| Msa0014770 | MtrunA17_Chr8g0386441 | 33.566 | 429 | 244 | 16 | 59 | 473 | 28 | 429 | 5.34e-67 | 221 |
| Msa0014770 | MtrunA17_Chr5g0435971 | 33.411 | 431 | 244 | 14 | 59 | 473 | 28 | 431 | 8.68e-67 | 220 |
| Msa0014770 | MtrunA17_Chr3g0095891 | 32.333 | 433 | 250 | 8 | 76 | 473 | 34 | 458 | 1.05e-66 | 221 |
| Msa0014770 | MtrunA17_Chr3g0099891 | 36.508 | 378 | 217 | 9 | 107 | 473 | 89 | 454 | 2.52e-66 | 220 |
| Msa0014770 | MtrunA17_Chr2g0291201 | 31.670 | 461 | 276 | 16 | 31 | 473 | 12 | 451 | 5.57e-66 | 219 |
| Msa0014770 | MtrunA17_Chr5g0419291 | 35.040 | 371 | 211 | 12 | 121 | 473 | 70 | 428 | 2.00e-64 | 214 |
| Msa0014770 | MtrunA17_Chr5g0442921 | 31.489 | 470 | 270 | 12 | 53 | 473 | 87 | 553 | 1.48e-61 | 210 |
| Msa0014770 | MtrunA17_Chr3g0099901 | 39.722 | 360 | 199 | 9 | 124 | 473 | 134 | 485 | 2.90e-61 | 207 |
| Msa0014770 | MtrunA17_Chr6g0486981 | 30.115 | 435 | 258 | 16 | 59 | 473 | 28 | 436 | 2.83e-59 | 201 |
| Msa0014770 | MtrunA17_Chr8g0352671 | 32.045 | 440 | 248 | 16 | 55 | 473 | 27 | 436 | 9.47e-59 | 199 |
| Msa0014770 | MtrunA17_Chr8g0352661 | 33.967 | 368 | 202 | 16 | 131 | 473 | 85 | 436 | 2.28e-58 | 198 |
| Msa0014770 | MtrunA17_Chr6g0487471 | 33.180 | 434 | 244 | 15 | 59 | 473 | 28 | 434 | 5.05e-58 | 197 |
| Msa0014770 | MtrunA17_Chr2g0333991 | 29.882 | 425 | 259 | 16 | 62 | 470 | 31 | 432 | 1.09e-57 | 196 |
| Msa0014770 | MtrunA17_Chr2g0311451 | 29.837 | 429 | 260 | 17 | 62 | 473 | 31 | 435 | 1.10e-55 | 191 |
| Msa0014770 | MtrunA17_Chr2g0307991 | 33.795 | 361 | 205 | 13 | 132 | 473 | 59 | 404 | 4.62e-53 | 184 |
| Msa0014770 | MtrunA17_Chr2g0308001 | 32.493 | 357 | 220 | 13 | 132 | 473 | 58 | 408 | 1.50e-50 | 178 |
| Msa0014770 | MtrunA17_Chr3g0087851 | 31.844 | 358 | 223 | 11 | 130 | 473 | 86 | 436 | 2.60e-49 | 174 |
| Msa0014770 | MtrunA17_Chr2g0310831 | 30.328 | 366 | 216 | 13 | 130 | 473 | 92 | 440 | 1.00e-48 | 173 |
| Msa0014770 | MtrunA17_Chr2g0310821 | 31.638 | 354 | 213 | 12 | 131 | 473 | 107 | 442 | 3.92e-48 | 171 |
| Msa0014770 | MtrunA17_Chr4g0061641 | 35.072 | 345 | 187 | 13 | 148 | 473 | 70 | 396 | 8.52e-48 | 169 |
| Msa0014770 | MtrunA17_Chr5g0395931 | 31.956 | 363 | 213 | 12 | 131 | 473 | 87 | 435 | 9.71e-48 | 170 |
| Msa0014770 | MtrunA17_Chr5g0395911 | 32.493 | 357 | 218 | 11 | 131 | 473 | 66 | 413 | 1.26e-47 | 169 |
| Msa0014770 | MtrunA17_Chr5g0395871 | 33.240 | 358 | 213 | 12 | 130 | 473 | 79 | 424 | 2.22e-45 | 163 |
| Msa0014770 | MtrunA17_Chr5g0415951 | 30.899 | 356 | 221 | 14 | 133 | 473 | 89 | 434 | 3.39e-45 | 163 |
| Msa0014770 | MtrunA17_Chr2g0310801 | 30.959 | 365 | 210 | 13 | 131 | 473 | 89 | 433 | 5.96e-45 | 162 |
| Msa0014770 | MtrunA17_Chr2g0307461 | 31.522 | 368 | 217 | 12 | 133 | 473 | 71 | 430 | 2.53e-43 | 158 |
| Msa0014770 | MtrunA17_Chr6g0457401 | 28.606 | 409 | 252 | 14 | 82 | 473 | 51 | 436 | 1.56e-41 | 153 |
| Msa0014770 | MtrunA17_Chr3g0133071 | 30.900 | 411 | 248 | 13 | 75 | 473 | 51 | 437 | 1.99e-41 | 153 |
| Msa0014770 | MtrunA17_Chr1g0164401 | 33.333 | 354 | 211 | 9 | 130 | 473 | 90 | 428 | 3.72e-41 | 152 |
| Msa0014770 | MtrunA17_Chr4g0023351 | 37.963 | 216 | 120 | 7 | 132 | 334 | 58 | 272 | 1.80e-40 | 147 |
| Msa0014770 | MtrunA17_Chr8g0353261 | 33.048 | 351 | 217 | 9 | 130 | 473 | 94 | 433 | 1.50e-37 | 142 |
| Msa0014770 | MtrunA17_Chr2g0312941 | 29.551 | 379 | 218 | 12 | 130 | 471 | 85 | 451 | 2.22e-35 | 137 |
| Msa0014770 | MtrunA17_Chr7g0265331 | 27.457 | 346 | 217 | 12 | 131 | 450 | 80 | 417 | 2.19e-30 | 123 |
| Msa0014770 | MtrunA17_Chr2g0309561 | 25.397 | 441 | 272 | 14 | 87 | 473 | 71 | 508 | 6.76e-30 | 122 |
| Msa0014770 | MtrunA17_Chr1g0179091 | 27.869 | 366 | 196 | 15 | 129 | 473 | 48 | 366 | 5.31e-29 | 117 |
| Msa0014770 | MtrunA17_Chr7g0267171 | 28.205 | 390 | 220 | 15 | 131 | 473 | 89 | 465 | 3.21e-28 | 116 |
| Msa0014770 | MtrunA17_Chr2g0320621 | 28.612 | 353 | 205 | 17 | 131 | 450 | 76 | 414 | 4.29e-28 | 116 |
| Msa0014770 | MtrunA17_Chr3g0112051 | 28.689 | 366 | 202 | 14 | 135 | 473 | 76 | 409 | 7.15e-28 | 115 |
| Msa0014770 | MtrunA17_Chr8g0352691 | 32.463 | 268 | 162 | 10 | 215 | 473 | 2 | 259 | 1.19e-27 | 111 |
| Msa0014770 | MtrunA17_Chr5g0395891 | 29.836 | 305 | 184 | 12 | 187 | 473 | 20 | 312 | 4.09e-27 | 110 |
| Msa0014770 | MtrunA17_Chr3g0082281 | 33.688 | 282 | 166 | 7 | 202 | 473 | 49 | 319 | 8.07e-27 | 110 |
| Msa0014770 | MtrunA17_Chr4g0027681 | 29.050 | 358 | 198 | 19 | 130 | 450 | 75 | 413 | 1.57e-26 | 112 |
| Msa0014770 | MtrunA17_Chr4g0056211 | 28.180 | 401 | 213 | 19 | 137 | 473 | 81 | 470 | 4.27e-26 | 110 |
| Msa0014770 | MtrunA17_Chr5g0401601 | 24.798 | 371 | 234 | 14 | 130 | 473 | 86 | 438 | 1.28e-25 | 110 |
| Msa0014770 | MtrunA17_Chr4g0053721 | 24.259 | 371 | 236 | 14 | 130 | 473 | 78 | 430 | 4.99e-25 | 108 |
| Msa0014770 | MtrunA17_Chr3g0110191 | 26.630 | 368 | 223 | 15 | 135 | 473 | 89 | 438 | 1.54e-24 | 105 |
| Msa0014770 | MtrunA17_Chr8g0384731 | 26.075 | 372 | 227 | 15 | 131 | 473 | 72 | 424 | 1.60e-24 | 105 |
| Msa0014770 | MtrunA17_Chr7g0239001 | 28.342 | 374 | 223 | 17 | 135 | 473 | 62 | 425 | 1.94e-24 | 105 |
| Msa0014770 | MtrunA17_Chr5g0399171 | 25.424 | 413 | 220 | 17 | 132 | 473 | 74 | 469 | 4.02e-24 | 105 |
| Msa0014770 | MtrunA17_Chr1g0189381 | 25.926 | 378 | 231 | 16 | 130 | 473 | 67 | 429 | 1.28e-23 | 103 |
| Msa0014770 | MtrunA17_Chr7g0221681 | 24.416 | 385 | 241 | 14 | 124 | 473 | 64 | 433 | 1.33e-23 | 103 |
| Msa0014770 | MtrunA17_Chr1g0179751 | 26.420 | 352 | 219 | 12 | 129 | 450 | 105 | 446 | 1.57e-23 | 103 |
| Msa0014770 | MtrunA17_Chr5g0419151 | 28.467 | 274 | 176 | 9 | 208 | 473 | 106 | 367 | 3.25e-22 | 97.8 |
| Msa0014770 | MtrunA17_Chr5g0434411 | 25.693 | 397 | 260 | 13 | 102 | 473 | 51 | 437 | 6.78e-22 | 97.8 |
| Msa0014770 | MtrunA17_Chr7g0249451 | 25.333 | 375 | 238 | 15 | 124 | 468 | 63 | 425 | 1.10e-21 | 97.4 |
| Msa0014770 | MtrunA17_Chr8g0352681 | 33.108 | 148 | 84 | 4 | 62 | 209 | 32 | 164 | 3.95e-20 | 87.4 |
| Msa0014770 | MtrunA17_Chr5g0406001 | 25.135 | 370 | 227 | 12 | 133 | 473 | 113 | 461 | 1.81e-19 | 91.3 |
| Msa0014770 | MtrunA17_Chr3g0124421 | 23.438 | 448 | 292 | 15 | 56 | 473 | 24 | 450 | 3.82e-19 | 90.1 |
| Msa0014770 | MtrunA17_Chr5g0425141 | 25.618 | 445 | 269 | 20 | 60 | 473 | 36 | 449 | 5.37e-19 | 89.7 |
| Msa0014770 | MtrunA17_Chr3g0130741 | 25.654 | 382 | 231 | 17 | 123 | 473 | 75 | 434 | 8.29e-19 | 88.6 |
| Msa0014770 | MtrunA17_Chr8g0371351 | 23.913 | 368 | 234 | 15 | 133 | 473 | 101 | 449 | 5.38e-18 | 86.7 |
| Msa0014770 | MtrunA17_Chr4g0010951 | 31.064 | 235 | 130 | 10 | 102 | 312 | 31 | 257 | 2.27e-17 | 84.3 |
| Msa0014770 | MtrunA17_Chr5g0434441 | 25.466 | 322 | 212 | 11 | 135 | 435 | 71 | 385 | 2.78e-17 | 84.0 |
| Msa0014770 | MtrunA17_Chr6g0484731 | 24.000 | 425 | 263 | 20 | 89 | 473 | 146 | 550 | 5.60e-17 | 83.6 |
| Msa0014770 | MtrunA17_Chr3g0078321 | 24.555 | 281 | 176 | 10 | 118 | 379 | 44 | 307 | 6.60e-15 | 76.6 |
| Msa0014770 | MtrunA17_Chr2g0287821 | 23.858 | 394 | 238 | 18 | 127 | 472 | 63 | 442 | 1.60e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014770 | AT3G20015.1 | 60.626 | 447 | 171 | 4 | 29 | 473 | 27 | 470 | 0.0 | 525 |
| Msa0014770 | AT1G25510.1 | 43.392 | 454 | 239 | 7 | 32 | 473 | 36 | 483 | 2.72e-124 | 371 |
| Msa0014770 | AT3G18490.1 | 42.800 | 500 | 250 | 10 | 2 | 473 | 9 | 500 | 2.77e-122 | 366 |
| Msa0014770 | AT1G01300.1 | 48.175 | 411 | 206 | 6 | 67 | 473 | 77 | 484 | 2.64e-117 | 353 |
| Msa0014770 | AT3G61820.1 | 47.512 | 402 | 199 | 5 | 83 | 473 | 83 | 483 | 9.40e-115 | 346 |
| Msa0014770 | AT5G10770.1 | 35.849 | 424 | 241 | 9 | 72 | 473 | 59 | 473 | 5.37e-77 | 249 |
| Msa0014770 | AT2G03200.1 | 35.802 | 405 | 234 | 13 | 86 | 473 | 63 | 458 | 9.14e-70 | 229 |
| Msa0014770 | AT5G10760.1 | 37.436 | 390 | 227 | 9 | 87 | 473 | 89 | 464 | 3.34e-66 | 220 |
| Msa0014770 | AT5G33340.1 | 31.735 | 438 | 260 | 12 | 50 | 473 | 22 | 434 | 4.44e-63 | 211 |
| Msa0014770 | AT1G79720.1 | 33.902 | 410 | 238 | 10 | 87 | 473 | 83 | 482 | 2.44e-60 | 205 |
| Msa0014770 | AT2G42980.1 | 32.054 | 443 | 256 | 14 | 72 | 473 | 86 | 524 | 3.07e-57 | 198 |
| Msa0014770 | AT3G59080.1 | 31.808 | 437 | 236 | 13 | 89 | 473 | 106 | 532 | 3.28e-57 | 198 |
| Msa0014770 | AT3G25700.1 | 33.158 | 380 | 227 | 11 | 120 | 473 | 71 | 449 | 9.37e-55 | 189 |
| Msa0014770 | AT1G64830.1 | 31.891 | 439 | 257 | 15 | 50 | 473 | 17 | 428 | 3.66e-54 | 187 |
| Msa0014770 | AT2G28040.2 | 33.333 | 351 | 201 | 10 | 132 | 473 | 55 | 381 | 1.56e-51 | 179 |
| Msa0014770 | AT2G28040.1 | 33.333 | 351 | 201 | 10 | 132 | 473 | 64 | 390 | 2.87e-51 | 179 |
| Msa0014770 | AT1G09750.1 | 31.956 | 363 | 229 | 10 | 122 | 473 | 93 | 448 | 8.54e-50 | 176 |
| Msa0014770 | AT3G54400.1 | 34.091 | 352 | 212 | 10 | 130 | 473 | 85 | 424 | 9.55e-50 | 176 |
| Msa0014770 | AT2G28010.1 | 29.457 | 387 | 239 | 9 | 96 | 473 | 30 | 391 | 3.52e-48 | 171 |
| Msa0014770 | AT3G59080.2 | 30.787 | 432 | 211 | 13 | 89 | 473 | 106 | 496 | 5.34e-48 | 172 |
| Msa0014770 | AT2G28030.1 | 31.445 | 353 | 204 | 10 | 133 | 473 | 61 | 387 | 6.61e-47 | 167 |
| Msa0014770 | AT2G28220.1 | 30.447 | 358 | 205 | 11 | 133 | 473 | 67 | 397 | 1.64e-43 | 158 |
| Msa0014770 | AT2G35615.1 | 27.765 | 443 | 267 | 17 | 59 | 473 | 26 | 443 | 2.08e-42 | 156 |
| Msa0014770 | AT1G31450.1 | 29.047 | 451 | 264 | 18 | 50 | 473 | 20 | 441 | 2.96e-42 | 155 |
| Msa0014770 | AT4G30040.1 | 30.636 | 346 | 211 | 9 | 133 | 460 | 85 | 419 | 1.02e-38 | 145 |
| Msa0014770 | AT2G28225.1 | 29.722 | 360 | 205 | 13 | 133 | 473 | 67 | 397 | 1.39e-38 | 145 |
| Msa0014770 | AT5G07030.1 | 33.426 | 359 | 208 | 11 | 130 | 473 | 112 | 454 | 7.55e-38 | 144 |
| Msa0014770 | AT2G23945.1 | 29.426 | 401 | 238 | 18 | 62 | 440 | 32 | 409 | 2.65e-36 | 140 |
| Msa0014770 | AT3G12700.1 | 26.531 | 441 | 283 | 16 | 52 | 473 | 42 | 460 | 3.81e-33 | 131 |
| Msa0014770 | AT4G30030.1 | 31.014 | 345 | 199 | 15 | 133 | 457 | 78 | 403 | 2.36e-32 | 128 |
| Msa0014770 | AT5G43100.1 | 27.273 | 363 | 227 | 13 | 130 | 473 | 73 | 417 | 6.40e-32 | 129 |
| Msa0014770 | AT5G43100.2 | 27.273 | 363 | 227 | 13 | 130 | 473 | 73 | 417 | 9.61e-32 | 127 |
| Msa0014770 | AT2G36670.2 | 27.874 | 348 | 212 | 13 | 131 | 450 | 98 | 434 | 2.21e-31 | 126 |
| Msa0014770 | AT2G36670.4 | 27.746 | 346 | 211 | 13 | 133 | 450 | 34 | 368 | 5.00e-31 | 124 |
| Msa0014770 | AT2G36670.3 | 27.746 | 346 | 211 | 13 | 133 | 450 | 34 | 368 | 5.00e-31 | 124 |
| Msa0014770 | AT2G36670.1 | 27.746 | 346 | 211 | 13 | 133 | 450 | 105 | 439 | 5.90e-31 | 125 |
| Msa0014770 | AT3G02740.1 | 27.733 | 375 | 227 | 15 | 128 | 473 | 80 | 439 | 8.28e-31 | 124 |
| Msa0014770 | AT3G02740.2 | 27.568 | 370 | 224 | 15 | 133 | 473 | 10 | 364 | 3.86e-30 | 122 |
| Msa0014770 | AT2G39710.1 | 28.571 | 378 | 215 | 16 | 135 | 472 | 67 | 429 | 1.19e-29 | 120 |
| Msa0014770 | AT3G50050.1 | 28.056 | 360 | 230 | 13 | 130 | 473 | 90 | 436 | 3.70e-29 | 121 |
| Msa0014770 | AT5G36260.1 | 24.932 | 369 | 240 | 12 | 131 | 473 | 76 | 433 | 1.54e-27 | 115 |
| Msa0014770 | AT1G05840.1 | 26.963 | 382 | 233 | 15 | 124 | 473 | 71 | 438 | 3.65e-27 | 114 |
| Msa0014770 | AT1G66180.1 | 28.022 | 364 | 226 | 13 | 135 | 473 | 74 | 426 | 3.69e-26 | 110 |
| Msa0014770 | AT5G37540.1 | 27.671 | 365 | 230 | 12 | 135 | 473 | 82 | 438 | 3.91e-26 | 110 |
| Msa0014770 | AT5G22850.1 | 28.286 | 350 | 210 | 14 | 131 | 450 | 79 | 417 | 3.93e-26 | 111 |
| Msa0014770 | AT1G65240.1 | 24.866 | 374 | 231 | 15 | 131 | 473 | 72 | 426 | 4.21e-25 | 108 |
| Msa0014770 | AT3G52500.1 | 27.561 | 410 | 239 | 15 | 110 | 473 | 70 | 467 | 1.80e-24 | 106 |
| Msa0014770 | AT5G02190.1 | 27.913 | 369 | 209 | 18 | 148 | 473 | 88 | 442 | 5.66e-24 | 104 |
| Msa0014770 | AT4G12920.1 | 28.000 | 350 | 197 | 11 | 133 | 460 | 58 | 374 | 1.90e-22 | 99.4 |
| Msa0014770 | AT1G08210.4 | 27.493 | 371 | 229 | 16 | 131 | 473 | 116 | 474 | 2.12e-22 | 100 |
| Msa0014770 | AT1G08210.3 | 27.493 | 371 | 229 | 16 | 131 | 473 | 130 | 488 | 2.51e-22 | 100 |
| Msa0014770 | AT1G08210.1 | 27.493 | 371 | 229 | 16 | 131 | 473 | 82 | 440 | 3.42e-22 | 99.8 |
| Msa0014770 | AT1G08210.2 | 28.840 | 319 | 190 | 14 | 131 | 424 | 82 | 388 | 7.76e-22 | 98.6 |
| Msa0014770 | AT5G45120.1 | 23.326 | 463 | 279 | 18 | 80 | 473 | 23 | 478 | 9.43e-22 | 98.2 |
| Msa0014770 | AT4G16563.1 | 27.387 | 398 | 209 | 16 | 150 | 473 | 100 | 491 | 4.37e-19 | 90.1 |
| Msa0014770 | AT1G77480.2 | 26.562 | 384 | 228 | 19 | 123 | 473 | 57 | 419 | 1.16e-18 | 88.6 |
| Msa0014770 | AT3G25700.2 | 33.537 | 164 | 95 | 5 | 120 | 269 | 71 | 234 | 1.22e-18 | 87.4 |
| Msa0014770 | AT4G33490.1 | 28.261 | 276 | 160 | 12 | 123 | 381 | 47 | 301 | 1.47e-18 | 87.8 |
| Msa0014770 | AT4G33490.2 | 28.261 | 276 | 160 | 12 | 123 | 381 | 50 | 304 | 1.54e-18 | 88.2 |
| Msa0014770 | AT1G77480.1 | 26.562 | 384 | 228 | 19 | 123 | 473 | 57 | 419 | 1.99e-18 | 88.2 |
| Msa0014770 | AT1G49050.2 | 27.132 | 258 | 154 | 13 | 133 | 369 | 30 | 274 | 4.59e-18 | 86.7 |
| Msa0014770 | AT3G51340.2 | 25.886 | 367 | 224 | 18 | 133 | 473 | 103 | 447 | 4.46e-17 | 84.3 |
| Msa0014770 | AT4G35880.1 | 24.217 | 351 | 224 | 14 | 133 | 460 | 107 | 438 | 1.40e-16 | 82.8 |
| Msa0014770 | AT3G51350.1 | 24.518 | 363 | 217 | 16 | 133 | 468 | 102 | 434 | 7.42e-16 | 80.5 |
| Msa0014770 | AT3G42550.1 | 25.210 | 357 | 212 | 15 | 130 | 473 | 75 | 389 | 1.88e-15 | 78.6 |
| Msa0014770 | AT4G35880.2 | 24.189 | 339 | 215 | 14 | 133 | 448 | 107 | 426 | 3.09e-15 | 78.2 |
| Msa0014770 | AT3G51340.3 | 25.566 | 309 | 188 | 14 | 133 | 418 | 103 | 392 | 3.40e-15 | 77.8 |
| Msa0014770 | AT1G44130.1 | 30.882 | 204 | 118 | 9 | 123 | 310 | 39 | 235 | 1.26e-14 | 75.9 |
| Msa0014770 | AT3G51360.1 | 25.641 | 351 | 211 | 16 | 83 | 413 | 52 | 372 | 2.92e-14 | 75.5 |
| Msa0014770 | AT3G51360.9 | 25.641 | 351 | 211 | 16 | 83 | 413 | 62 | 382 | 3.13e-14 | 75.1 |
| Msa0014770 | AT3G51360.10 | 25.641 | 351 | 211 | 16 | 83 | 413 | 52 | 372 | 3.49e-14 | 74.7 |
| Msa0014770 | AT3G51360.4 | 24.798 | 371 | 229 | 16 | 83 | 433 | 52 | 392 | 3.51e-14 | 74.7 |
| Msa0014770 | AT3G51360.6 | 25.641 | 351 | 211 | 16 | 83 | 413 | 62 | 382 | 3.76e-14 | 74.7 |
| Msa0014770 | AT3G51360.5 | 24.798 | 371 | 229 | 16 | 83 | 433 | 62 | 402 | 4.49e-14 | 74.3 |
| Msa0014770 | AT3G51340.4 | 25.175 | 286 | 175 | 13 | 133 | 395 | 103 | 372 | 2.34e-13 | 72.0 |
| Msa0014770 | AT3G51340.1 | 25.175 | 286 | 175 | 13 | 133 | 395 | 103 | 372 | 2.36e-13 | 72.8 |
| Msa0014770 | AT3G51360.7 | 26.246 | 301 | 185 | 14 | 133 | 413 | 5 | 288 | 1.06e-12 | 70.1 |
| Msa0014770 | AT3G51360.2 | 25.574 | 305 | 179 | 14 | 83 | 369 | 62 | 336 | 1.23e-11 | 66.2 |
Find 135 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAATATTTGTTCGGATA+TGG | 0.122611 | 1_1:+23691576 | None:intergenic |
| GCTACTTCTGCTTCGTTTAT+TGG | 0.138095 | 1_1:-23692999 | Msa0014770:CDS |
| TTCTACTACGTCTCACTTTC+GGG | 0.179528 | 1_1:-23691625 | Msa0014770:CDS |
| CTACTTCTGCTTCGTTTATT+GGG | 0.181833 | 1_1:-23692998 | Msa0014770:CDS |
| ACTAAAACAATCTCGAATTT+TGG | 0.197402 | 1_1:-23691131 | Msa0014770:three_prime_UTR |
| GCATTTGCTCCTTCACCTTC+TGG | 0.202156 | 1_1:-23691271 | Msa0014770:CDS |
| CCTTCTGGTCTTTCCATCAT+AGG | 0.241850 | 1_1:-23691256 | Msa0014770:CDS |
| TTTGGATCTGATGTAGTTTC+AGG | 0.263715 | 1_1:-23693179 | Msa0014770:CDS |
| ATCCAAAGGCTCCGCCGGTT+TGG | 0.265743 | 1_1:+23691761 | None:intergenic |
| GATATCCGCACCTCCCTTTC+CGG | 0.267613 | 1_1:+23692925 | None:intergenic |
| CTTCTACTACGTCTCACTTT+CGG | 0.273039 | 1_1:-23691626 | Msa0014770:CDS |
| TTGATCCCGGCCGATGATAT+TGG | 0.281436 | 1_1:-23691307 | Msa0014770:CDS |
| TCCAAAGGCTCCGCCGGTTT+GGG | 0.283928 | 1_1:+23691762 | None:intergenic |
| AAGTGGTTAGTGTTGTTATT+AGG | 0.304872 | 1_1:+23693498 | None:intergenic |
| ATTCAGGAAGTGATATTGTT+TGG | 0.328169 | 1_1:-23693079 | Msa0014770:CDS |
| GCCCAAACCGGCGGAGCCTT+TGG | 0.328588 | 1_1:-23691763 | Msa0014770:CDS |
| GAGGTTGTTGTTGGGTATTA+TGG | 0.333275 | 1_1:+23693381 | None:intergenic |
| GTTTCTATCGATGGAACTAA+TGG | 0.337355 | 1_1:-23691208 | Msa0014770:CDS |
| AACGGTCCGCCCGATGGTTA+TGG | 0.339939 | 1_1:+23691897 | None:intergenic |
| TATGTCTTTCGTGGGCCAAT+TGG | 0.346916 | 1_1:-23691788 | Msa0014770:CDS |
| GTTGGAGCAGCTGGGTTGTT+AGG | 0.347858 | 1_1:-23691826 | Msa0014770:CDS |
| GGAATGTTTGTTGGAGCAGC+TGG | 0.350251 | 1_1:-23691835 | Msa0014770:CDS |
| ACAGCAACAGAAGCTAGTTT+TGG | 0.352053 | 1_1:-23693197 | Msa0014770:CDS |
| CGCCGGTTTGGGCTCCCAAT+TGG | 0.356798 | 1_1:+23691773 | None:intergenic |
| TGAAATATTTGTTCGGATAT+GGG | 0.367001 | 1_1:+23691577 | None:intergenic |
| TCCTGCTATTTATCAGTATA+TGG | 0.379135 | 1_1:-23693108 | Msa0014770:CDS |
| ATGTCTTTCGTGGGCCAATT+GGG | 0.379833 | 1_1:-23691787 | Msa0014770:CDS |
| CAGTATATGGTGATAGATTC+AGG | 0.394103 | 1_1:-23693095 | Msa0014770:CDS |
| TTAGTGTTGTTATTAGGATT+AGG | 0.396155 | 1_1:+23693504 | None:intergenic |
| TGGAACAAGGGAATGTTTGT+TGG | 0.417853 | 1_1:-23691844 | Msa0014770:CDS |
| ATATTTCAGTTAACTGATAT+AGG | 0.421183 | 1_1:-23691562 | Msa0014770:CDS |
| TCACTTTCGGGTCTTGCAGT+TGG | 0.424557 | 1_1:-23691613 | Msa0014770:CDS |
| CTTTCGGGTCTTGCAGTTGG+AGG | 0.428746 | 1_1:-23691610 | Msa0014770:CDS |
| TCATCCGGTTCACTCGAATT+CGG | 0.429351 | 1_1:-23691712 | Msa0014770:CDS |
| CAGTTAACTGATATAGGAAC+GGG | 0.432458 | 1_1:-23691556 | Msa0014770:CDS |
| TTGCTGAATATTCCCTATGA+TGG | 0.435218 | 1_1:+23691243 | None:intergenic |
| TTGATGATGATGTTGCTTGC+CGG | 0.437671 | 1_1:-23692944 | Msa0014770:CDS |
| GCAGCTGGGTTGTTAGGCCT+CGG | 0.440728 | 1_1:-23691820 | Msa0014770:CDS |
| TTGCACCTACGGGCATTGCT+TGG | 0.450316 | 1_1:+23691686 | None:intergenic |
| TGCATCGCGAAAAGCATTGT+AGG | 0.452930 | 1_1:+23691483 | None:intergenic |
| CTGCAATCGGGTGCGGACAT+TGG | 0.452938 | 1_1:-23691864 | Msa0014770:CDS |
| TGTCTTATCTCTCGAGGCAC+TGG | 0.460971 | 1_1:-23691736 | Msa0014770:CDS |
| ATGTGGTGTTGGAAAGGAAA+TGG | 0.462776 | 1_1:+23693475 | None:intergenic |
| GGCCAATTGGGAGCCCAAAC+CGG | 0.466739 | 1_1:-23691775 | Msa0014770:CDS |
| AGTTAACTGAAATATTTGTT+CGG | 0.472372 | 1_1:+23691570 | None:intergenic |
| TTCTGCTTCGTTTATTGGGG+TGG | 0.480733 | 1_1:-23692994 | Msa0014770:CDS |
| TTACTGAGTGTGTTGGTGGT+TGG | 0.481231 | 1_1:+23693566 | None:intergenic |
| GGAATTCAAGTTTCTATCGA+TGG | 0.482938 | 1_1:-23691217 | Msa0014770:CDS |
| CTTCTGGTCTTTCCATCATA+GGG | 0.484726 | 1_1:-23691255 | Msa0014770:CDS |
| AAATCTTAACCTTTCCCGCC+AGG | 0.484884 | 1_1:-23691336 | Msa0014770:CDS |
| GAGTGAGGACTGAGGAATGA+TGG | 0.485034 | 1_1:+23693600 | None:intergenic |
| TGTTTGCTTCAACACACATT+GGG | 0.485439 | 1_1:+23691169 | None:intergenic |
| AGTGTGTTGGTGGTTGGTGA+AGG | 0.486160 | 1_1:+23693572 | None:intergenic |
| GATTGCAGTGTCCTTGATAA+CGG | 0.491062 | 1_1:+23691879 | None:intergenic |
| ATACCCAACAACAACCTCAA+TGG | 0.495019 | 1_1:-23693376 | Msa0014770:CDS |
| TCTCTTACTGAGTGTGTTGG+TGG | 0.501582 | 1_1:+23693562 | None:intergenic |
| AGTGAGACGTAGTAGAAGCT+AGG | 0.502354 | 1_1:+23691631 | None:intergenic |
| GTTATCAAGGACACTGCAAT+CGG | 0.503421 | 1_1:-23691877 | Msa0014770:CDS |
| ATTAGGATTAGGAGTAGAAG+AGG | 0.503521 | 1_1:+23693515 | None:intergenic |
| AGTAGAAGCTAGGGTAGAAC+GGG | 0.505044 | 1_1:+23691641 | None:intergenic |
| GGGTTGTTAGGCCTCGGAGG+TGG | 0.505394 | 1_1:-23691814 | Msa0014770:CDS |
| GCGTCCGAATTCGAGTGAAC+CGG | 0.505443 | 1_1:+23691708 | None:intergenic |
| GTGAGACGTAGTAGAAGCTA+GGG | 0.505740 | 1_1:+23691632 | None:intergenic |
| AGGTGGACCTATGTCTTTCG+TGG | 0.506441 | 1_1:-23691797 | Msa0014770:CDS |
| ATAAACGAAGCAGAAGTAGC+AGG | 0.508250 | 1_1:+23693002 | None:intergenic |
| TGCGGATATCAAGTTGCATA+TGG | 0.508505 | 1_1:-23692912 | Msa0014770:CDS |
| TTTCCATTGAGGTTGTTGTT+GGG | 0.509707 | 1_1:+23693373 | None:intergenic |
| TCTCGAGGCACTGGATCATC+CGG | 0.510100 | 1_1:-23691727 | Msa0014770:CDS |
| CTCTTGAAACCATAACCATC+GGG | 0.512781 | 1_1:-23691906 | Msa0014770:CDS |
| CATCGGGCGGACCGTTATCA+AGG | 0.514418 | 1_1:-23691890 | Msa0014770:CDS |
| AGGAACCCACATTGCACCTA+CGG | 0.516231 | 1_1:+23691675 | None:intergenic |
| CTTGATAACGGTCCGCCCGA+TGG | 0.523145 | 1_1:+23691891 | None:intergenic |
| ATGATGTTGCTTGCCGGAAA+GGG | 0.527421 | 1_1:-23692938 | Msa0014770:CDS |
| AAAGTTCCAATATCATCGGC+CGG | 0.527527 | 1_1:+23691301 | None:intergenic |
| GTGTGTTGGTGGTTGGTGAA+GGG | 0.527741 | 1_1:+23693573 | None:intergenic |
| TGCTCTCTTACTGAGTGTGT+TGG | 0.531988 | 1_1:+23693559 | None:intergenic |
| AACAGTAGGTAACCTGGTAA+TGG | 0.534799 | 1_1:+23691507 | None:intergenic |
| ACAGTATCCAAAGGCTCCGC+CGG | 0.535096 | 1_1:+23691756 | None:intergenic |
| TATCAAGTTGCATATGGTGA+TGG | 0.536075 | 1_1:-23692906 | Msa0014770:CDS |
| TACTTCTGCTTCGTTTATTG+GGG | 0.538816 | 1_1:-23692997 | Msa0014770:CDS |
| GGAACCCACATTGCACCTAC+GGG | 0.543677 | 1_1:+23691676 | None:intergenic |
| GTAGTTTCAGGTACTGAAGA+AGG | 0.546142 | 1_1:-23693167 | Msa0014770:CDS |
| ACCATATACTGATAAATAGC+AGG | 0.551497 | 1_1:+23693107 | None:intergenic |
| TGGAAGTGAGAATGTGGTGT+TGG | 0.553165 | 1_1:+23693464 | None:intergenic |
| GCTCTTGAAACCATAACCAT+CGG | 0.557569 | 1_1:-23691907 | Msa0014770:CDS |
| GACACGTGTTATGACTTGAA+CGG | 0.559620 | 1_1:-23691409 | Msa0014770:CDS |
| GAAATATTTGTTCGGATATG+GGG | 0.560097 | 1_1:+23691578 | None:intergenic |
| AATTGGCCCACGAAAGACAT+AGG | 0.560178 | 1_1:+23691790 | None:intergenic |
| CGGGTGCGGACATTGGAACA+AGG | 0.561496 | 1_1:-23691857 | Msa0014770:CDS |
| ACACCGGCACAGCCATTACC+AGG | 0.562171 | 1_1:-23691519 | Msa0014770:CDS |
| GATGATGTTGCTTGCCGGAA+AGG | 0.565770 | 1_1:-23692939 | Msa0014770:CDS |
| TAGTAGAAGCTAGGGTAGAA+CGG | 0.569534 | 1_1:+23691640 | None:intergenic |
| ATGTTTGCTTCAACACACAT+TGG | 0.570489 | 1_1:+23691168 | None:intergenic |
| ATCAAGTTGCATATGGTGAT+GGG | 0.575723 | 1_1:-23692905 | Msa0014770:CDS |
| AAGTTCCAATATCATCGGCC+GGG | 0.576206 | 1_1:+23691302 | None:intergenic |
| TTAGGATTAGGAGTAGAAGA+GGG | 0.579457 | 1_1:+23693516 | None:intergenic |
| AGGTGTTGGAAGTGAGAATG+TGG | 0.580888 | 1_1:+23693458 | None:intergenic |
| AAGGACACTGCAATCGGGTG+CGG | 0.585643 | 1_1:-23691871 | Msa0014770:CDS |
| TCAGTTAACTGATATAGGAA+CGG | 0.586143 | 1_1:-23691557 | Msa0014770:CDS |
| TCAGGTACTGAAGAAGGAAG+TGG | 0.588469 | 1_1:-23693161 | Msa0014770:CDS |
| ACAGAAAGTTCCAATATCAT+CGG | 0.590346 | 1_1:+23691297 | None:intergenic |
| GGATACTGTCTTATCTCTCG+AGG | 0.592311 | 1_1:-23691742 | Msa0014770:CDS |
| TAAACGAAGCAGAAGTAGCA+GGG | 0.592676 | 1_1:+23693003 | None:intergenic |
| GGTGGACCTATGTCTTTCGT+GGG | 0.595416 | 1_1:-23691796 | Msa0014770:CDS |
| TGATTATAACATTGATCACA+AGG | 0.597383 | 1_1:+23693044 | None:intergenic |
| ATAGGGAATATTCAGCAAGA+AGG | 0.599831 | 1_1:-23691238 | Msa0014770:CDS |
| GTGAGAATGTGGTGTTGGAA+AGG | 0.600359 | 1_1:+23693469 | None:intergenic |
| TAACCTGGTAATGGCTGTGC+CGG | 0.602170 | 1_1:+23691516 | None:intergenic |
| AAAGCATTGTAGGCAACAGT+AGG | 0.603981 | 1_1:+23691493 | None:intergenic |
| GTAGGCAACAGTAGGTAACC+TGG | 0.609612 | 1_1:+23691501 | None:intergenic |
| GAATGTTTGTTGGAGCAGCT+GGG | 0.609714 | 1_1:-23691834 | Msa0014770:CDS |
| TTATCAAGGACACTGCAATC+GGG | 0.611505 | 1_1:-23691876 | Msa0014770:CDS |
| AGGAACGGGAGGAGTTGTCA+TGG | 0.613607 | 1_1:-23691542 | Msa0014770:CDS |
| CAATGCCCGTAGGTGCAATG+TGG | 0.615447 | 1_1:-23691681 | Msa0014770:CDS |
| GGAGGAGTTGTCATGGACAC+CGG | 0.620713 | 1_1:-23691535 | Msa0014770:CDS |
| TTGGTGAAGGGATTTGAGTG+AGG | 0.624084 | 1_1:+23693585 | None:intergenic |
| AATGCCCGTAGGTGCAATGT+GGG | 0.625127 | 1_1:-23691680 | Msa0014770:CDS |
| ATGGAAAGACCAGAAGGTGA+AGG | 0.625165 | 1_1:+23691262 | None:intergenic |
| GGTGATGGGTCGTCTACCAA+AGG | 0.626771 | 1_1:-23692891 | Msa0014770:intron |
| ATAGAAACTCTGGGAGCACG+TGG | 0.629230 | 1_1:+23691436 | None:intergenic |
| AGGGATTTGAGTGAGGACTG+AGG | 0.629426 | 1_1:+23693592 | None:intergenic |
| TGTTGGAAAGGAAATGGAAG+TGG | 0.637079 | 1_1:+23693481 | None:intergenic |
| GGACGCCAAGCAATGCCCGT+AGG | 0.637191 | 1_1:-23691691 | Msa0014770:CDS |
| CGACACTGTTGGAACTCGAA+CGG | 0.646861 | 1_1:+23691378 | None:intergenic |
| GCTGGGTTGTTAGGCCTCGG+AGG | 0.647032 | 1_1:-23691817 | Msa0014770:CDS |
| GGGTGCGGACATTGGAACAA+GGG | 0.650156 | 1_1:-23691856 | Msa0014770:CDS |
| ATGTTGCTTGCCGGAAAGGG+AGG | 0.650168 | 1_1:-23692935 | Msa0014770:CDS |
| CCTATGATGGAAAGACCAGA+AGG | 0.651297 | 1_1:+23691256 | None:intergenic |
| CAATTGGGAGCCCAAACCGG+CGG | 0.653313 | 1_1:-23691772 | Msa0014770:CDS |
| TTAACTGATATAGGAACGGG+AGG | 0.659844 | 1_1:-23691553 | Msa0014770:CDS |
| TAGAACGGGTTATGAATGAG+AGG | 0.671064 | 1_1:+23691655 | None:intergenic |
| AGAGATAAGACAGTATCCAA+AGG | 0.673865 | 1_1:+23691747 | None:intergenic |
| GCTTGCCGGAAAGGGAGGTG+CGG | 0.676231 | 1_1:-23692930 | Msa0014770:CDS |
| AAGACATAGGTCCACCTCCG+AGG | 0.695349 | 1_1:+23691803 | None:intergenic |
| TTGAAACCATAACCATCGGG+CGG | 0.703144 | 1_1:-23691903 | Msa0014770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAGATGATGTTTATATT+AGG | - | chr1_1:23691953-23691972 | Msa0014770:intron | 15.0% |
| !!! | AGAATTTAATTTAACATGTT+TGG | - | chr1_1:23692017-23692036 | Msa0014770:intron | 15.0% |
| !!! | TGATAAGGAATTAATTTTAA+AGG | - | chr1_1:23692364-23692383 | Msa0014770:intron | 15.0% |
| !!! | TATTTTGTTAGAATAGGAAT+TGG | - | chr1_1:23691574-23691593 | Msa0014770:CDS | 20.0% |
| !!! | AGACAAAATTGATTCTAAAA+GGG | - | chr1_1:23691990-23692009 | Msa0014770:intron | 20.0% |
| !!! | AAGCTAGAATTTTTAGATTT+TGG | - | chr1_1:23692456-23692475 | Msa0014770:intron | 20.0% |
| !!! | TGTTTTAAACACATTGTTTA+AGG | + | chr1_1:23692539-23692558 | None:intergenic | 20.0% |
| !! | AAAACAAAGTGATTTATGTT+TGG | + | chr1_1:23692585-23692604 | None:intergenic | 20.0% |
| !!! | ACTTTGTTTTCAACTTTTAT+TGG | - | chr1_1:23692595-23692614 | Msa0014770:intron | 20.0% |
| !! | AAAGAGTAGAATAAAATTCA+TGG | - | chr1_1:23692727-23692746 | Msa0014770:intron | 20.0% |
| !! | AGTTAACTGAAATATTTGTT+CGG | + | chr1_1:23693141-23693160 | None:intergenic | 20.0% |
| !! | ATATTTCAGTTAACTGATAT+AGG | - | chr1_1:23693146-23693165 | Msa0014770:CDS | 20.0% |
| !!! | TTTATAGTTAGCTTTTTCTA+TGG | - | chr1_1:23693667-23693686 | Msa0014770:five_prime_UTR | 20.0% |
| !! | TTAGTGTTGTTATTAGGATT+AGG | + | chr1_1:23691207-23691226 | None:intergenic | 25.0% |
| !!! | TGGTTTTTTTGGTGTTTTTA+AGG | + | chr1_1:23691390-23691409 | None:intergenic | 25.0% |
| !! | GGTGAATATTTTGTTAGAAT+AGG | - | chr1_1:23691568-23691587 | Msa0014770:CDS | 25.0% |
| ! | TGATTATAACATTGATCACA+AGG | + | chr1_1:23691667-23691686 | None:intergenic | 25.0% |
| !! | TATATTAGGTTCCATTTTAG+AGG | - | chr1_1:23691967-23691986 | Msa0014770:intron | 25.0% |
| !! | GAGACAAAATTGATTCTAAA+AGG | - | chr1_1:23691989-23692008 | Msa0014770:intron | 25.0% |
| !!! | AATTATCATTTGCCCTTTTT+TGG | + | chr1_1:23692253-23692272 | None:intergenic | 25.0% |
| ! | AAGCTTAATTAATATTCCAC+TGG | + | chr1_1:23692690-23692709 | None:intergenic | 25.0% |
| !! | TTTGTTTCCAATGTTGATAA+AGG | - | chr1_1:23692771-23692790 | Msa0014770:intron | 25.0% |
| !! | TTGTTTCCAATGTTGATAAA+GGG | - | chr1_1:23692772-23692791 | Msa0014770:intron | 25.0% |
| ! | TGAAATATTTGTTCGGATAT+GGG | + | chr1_1:23693134-23693153 | None:intergenic | 25.0% |
| !!! | AAATTCGAGATTGTTTTAGT+GGG | + | chr1_1:23693577-23693596 | None:intergenic | 25.0% |
| !!! | AAAATTCGAGATTGTTTTAG+TGG | + | chr1_1:23693578-23693597 | None:intergenic | 25.0% |
| !! | ACTAAAACAATCTCGAATTT+TGG | - | chr1_1:23693577-23693596 | Msa0014770:five_prime_UTR | 25.0% |
| ! | AAGTGGTTAGTGTTGTTATT+AGG | + | chr1_1:23691213-23691232 | None:intergenic | 30.0% |
| ! | AGATTGCGTTTTCTACATTT+AGG | + | chr1_1:23691273-23691292 | None:intergenic | 30.0% |
| !!! | TTATGGTTTTGTTGTTTGAG+TGG | + | chr1_1:23691313-23691332 | None:intergenic | 30.0% |
| !!! | AACAGTTTTGTTTTCCATTG+AGG | + | chr1_1:23691349-23691368 | None:intergenic | 30.0% |
| ! | TCCTGCTATTTATCAGTATA+TGG | - | chr1_1:23691600-23691619 | Msa0014770:CDS | 30.0% |
| ACCATATACTGATAAATAGC+AGG | + | chr1_1:23691604-23691623 | None:intergenic | 30.0% | |
| ATTCAGGAAGTGATATTGTT+TGG | - | chr1_1:23691629-23691648 | Msa0014770:CDS | 30.0% | |
| AACAAAGCAAGAAAAATGTG+TGG | + | chr1_1:23691878-23691897 | None:intergenic | 30.0% | |
| !! | CAATTTTGTCTCCTCTAAAA+TGG | + | chr1_1:23691981-23692000 | None:intergenic | 30.0% |
| !!! | GTGTATGTTGGTTTTGTTTT+TGG | - | chr1_1:23692340-23692359 | Msa0014770:intron | 30.0% |
| !!! | GGTTTTGTTTTTGGATGATA+AGG | - | chr1_1:23692349-23692368 | Msa0014770:intron | 30.0% |
| ! | GTTTAAAACACTTGTTAGCA+TGG | - | chr1_1:23692549-23692568 | Msa0014770:intron | 30.0% |
| ! | AGTTTTACTCATATTACCAG+TGG | - | chr1_1:23692671-23692690 | Msa0014770:intron | 30.0% |
| GAAATATTTGTTCGGATATG+GGG | + | chr1_1:23693133-23693152 | None:intergenic | 30.0% | |
| CTGAAATATTTGTTCGGATA+TGG | + | chr1_1:23693135-23693154 | None:intergenic | 30.0% | |
| TCAGTTAACTGATATAGGAA+CGG | - | chr1_1:23693151-23693170 | Msa0014770:CDS | 30.0% | |
| GTGTCAAAAATAGAAACTCT+GGG | + | chr1_1:23693284-23693303 | None:intergenic | 30.0% | |
| GAAAAATAAAACGACACTGT+TGG | + | chr1_1:23693344-23693363 | None:intergenic | 30.0% | |
| !!! | ACAGTGTCGTTTTATTTTTC+TGG | - | chr1_1:23693344-23693363 | Msa0014770:CDS | 30.0% |
| ACAGAAAGTTCCAATATCAT+CGG | + | chr1_1:23693414-23693433 | None:intergenic | 30.0% | |
| !!! | ACTAATGGTTTTGTAGGATT+TGG | - | chr1_1:23693515-23693534 | Msa0014770:CDS | 30.0% |
| TTAGGATTAGGAGTAGAAGA+GGG | + | chr1_1:23691195-23691214 | None:intergenic | 35.0% | |
| ATTAGGATTAGGAGTAGAAG+AGG | + | chr1_1:23691196-23691215 | None:intergenic | 35.0% | |
| ! | CGTTTTCTACATTTAGGTGT+TGG | + | chr1_1:23691267-23691286 | None:intergenic | 35.0% |
| ! | TTTCCATTGAGGTTGTTGTT+GGG | + | chr1_1:23691338-23691357 | None:intergenic | 35.0% |
| ! | TTTTCCATTGAGGTTGTTGT+TGG | + | chr1_1:23691339-23691358 | None:intergenic | 35.0% |
| ! | TGTTTTGTGGGTGGTTTTTT+TGG | + | chr1_1:23691401-23691420 | None:intergenic | 35.0% |
| !! | TGAGTTGAAACGTGTTTTGT+GGG | + | chr1_1:23691413-23691432 | None:intergenic | 35.0% |
| !! | TGTTTTTGTTGAGACGGTTA+AGG | + | chr1_1:23691471-23691490 | None:intergenic | 35.0% |
| !! | GTTGTGTGTTTTTGTTGAGA+CGG | + | chr1_1:23691477-23691496 | None:intergenic | 35.0% |
| TTTGGATCTGATGTAGTTTC+AGG | - | chr1_1:23691529-23691548 | Msa0014770:CDS | 35.0% | |
| CAGTATATGGTGATAGATTC+AGG | - | chr1_1:23691613-23691632 | Msa0014770:CDS | 35.0% | |
| GAAGTAGCAGGGTTAAAAAT+AGG | + | chr1_1:23691697-23691716 | None:intergenic | 35.0% | |
| CTACTTCTGCTTCGTTTATT+GGG | - | chr1_1:23691710-23691729 | Msa0014770:CDS | 35.0% | |
| TACTTCTGCTTCGTTTATTG+GGG | - | chr1_1:23691711-23691730 | Msa0014770:CDS | 35.0% | |
| ! | TATCAAGTTGCATATGGTGA+TGG | - | chr1_1:23691802-23691821 | Msa0014770:CDS | 35.0% |
| ! | ATCAAGTTGCATATGGTGAT+GGG | - | chr1_1:23691803-23691822 | Msa0014770:CDS | 35.0% |
| TATGAGCACCAAACCAAAAA+AGG | - | chr1_1:23692237-23692256 | Msa0014770:intron | 35.0% | |
| ATGAGCACCAAACCAAAAAA+GGG | - | chr1_1:23692238-23692257 | Msa0014770:intron | 35.0% | |
| !!! | TCATTTGCCCTTTTTTGGTT+TGG | + | chr1_1:23692248-23692267 | None:intergenic | 35.0% |
| GATTCACATTGAGTGTATGT+TGG | - | chr1_1:23692328-23692347 | Msa0014770:intron | 35.0% | |
| AGAGATAAGACAGTATCCAA+AGG | + | chr1_1:23692964-23692983 | None:intergenic | 35.0% | |
| CAGTTAACTGATATAGGAAC+GGG | - | chr1_1:23693152-23693171 | Msa0014770:CDS | 35.0% | |
| CGTGTCAAAAATAGAAACTC+TGG | + | chr1_1:23693285-23693304 | None:intergenic | 35.0% | |
| !!! | GTGTCGTTTTATTTTTCTGG+TGG | - | chr1_1:23693347-23693366 | Msa0014770:CDS | 35.0% |
| TTGCTGAATATTCCCTATGA+TGG | + | chr1_1:23693468-23693487 | None:intergenic | 35.0% | |
| ATAGGGAATATTCAGCAAGA+AGG | - | chr1_1:23693470-23693489 | Msa0014770:CDS | 35.0% | |
| ! | GGAATTCAAGTTTCTATCGA+TGG | - | chr1_1:23693491-23693510 | Msa0014770:CDS | 35.0% |
| GTTTCTATCGATGGAACTAA+TGG | - | chr1_1:23693500-23693519 | Msa0014770:CDS | 35.0% | |
| !!! | GATGGAACTAATGGTTTTGT+AGG | - | chr1_1:23693509-23693528 | Msa0014770:CDS | 35.0% |
| TGTTTGCTTCAACACACATT+GGG | + | chr1_1:23693542-23693561 | None:intergenic | 35.0% | |
| ATGTTTGCTTCAACACACAT+TGG | + | chr1_1:23693543-23693562 | None:intergenic | 35.0% | |
| TGTTGGAAAGGAAATGGAAG+TGG | + | chr1_1:23691230-23691249 | None:intergenic | 40.0% | |
| ! | ATGTGGTGTTGGAAAGGAAA+TGG | + | chr1_1:23691236-23691255 | None:intergenic | 40.0% |
| ! | GAGGTTGTTGTTGGGTATTA+TGG | + | chr1_1:23691330-23691349 | None:intergenic | 40.0% |
| ATACCCAACAACAACCTCAA+TGG | - | chr1_1:23691332-23691351 | Msa0014770:CDS | 40.0% | |
| !! | GTGAGTTGAAACGTGTTTTG+TGG | + | chr1_1:23691414-23691433 | None:intergenic | 40.0% |
| ! | TTTTGTTGAGACGGTTAAGG+AGG | + | chr1_1:23691468-23691487 | None:intergenic | 40.0% |
| !! | ACAGCAACAGAAGCTAGTTT+TGG | - | chr1_1:23691511-23691530 | Msa0014770:CDS | 40.0% |
| !! | GTAGTTTCAGGTACTGAAGA+AGG | - | chr1_1:23691541-23691560 | Msa0014770:CDS | 40.0% |
| TAAACGAAGCAGAAGTAGCA+GGG | + | chr1_1:23691708-23691727 | None:intergenic | 40.0% | |
| ATAAACGAAGCAGAAGTAGC+AGG | + | chr1_1:23691709-23691728 | None:intergenic | 40.0% | |
| GCTACTTCTGCTTCGTTTAT+TGG | - | chr1_1:23691709-23691728 | Msa0014770:CDS | 40.0% | |
| !! | TTGATGATGATGTTGCTTGC+CGG | - | chr1_1:23691764-23691783 | Msa0014770:CDS | 40.0% |
| ! | TGCGGATATCAAGTTGCATA+TGG | - | chr1_1:23691796-23691815 | Msa0014770:CDS | 40.0% |
| CTTCACACAGTACATACCTT+TGG | + | chr1_1:23691836-23691855 | None:intergenic | 40.0% | |
| AAGCGTCCCTTTATCAACAT+TGG | + | chr1_1:23692781-23692800 | None:intergenic | 40.0% | |
| GCTCTTGAAACCATAACCAT+CGG | - | chr1_1:23692801-23692820 | Msa0014770:intron | 40.0% | |
| CTCTTGAAACCATAACCATC+GGG | - | chr1_1:23692802-23692821 | Msa0014770:intron | 40.0% | |
| GATTGCAGTGTCCTTGATAA+CGG | + | chr1_1:23692832-23692851 | None:intergenic | 40.0% | |
| GTTATCAAGGACACTGCAAT+CGG | - | chr1_1:23692831-23692850 | Msa0014770:intron | 40.0% | |
| TTATCAAGGACACTGCAATC+GGG | - | chr1_1:23692832-23692851 | Msa0014770:intron | 40.0% | |
| TGGAACAAGGGAATGTTTGT+TGG | - | chr1_1:23692864-23692883 | Msa0014770:intron | 40.0% | |
| !! | TAGAACGGGTTATGAATGAG+AGG | + | chr1_1:23693056-23693075 | None:intergenic | 40.0% |
| TAGTAGAAGCTAGGGTAGAA+CGG | + | chr1_1:23693071-23693090 | None:intergenic | 40.0% | |
| CTTCTACTACGTCTCACTTT+CGG | - | chr1_1:23693082-23693101 | Msa0014770:CDS | 40.0% | |
| TTCTACTACGTCTCACTTTC+GGG | - | chr1_1:23693083-23693102 | Msa0014770:CDS | 40.0% | |
| TTAACTGATATAGGAACGGG+AGG | - | chr1_1:23693155-23693174 | Msa0014770:CDS | 40.0% | |
| AACAGTAGGTAACCTGGTAA+TGG | + | chr1_1:23693204-23693223 | None:intergenic | 40.0% | |
| !! | AAAGCATTGTAGGCAACAGT+AGG | + | chr1_1:23693218-23693237 | None:intergenic | 40.0% |
| GACACGTGTTATGACTTGAA+CGG | - | chr1_1:23693299-23693318 | Msa0014770:CDS | 40.0% | |
| AAAGTTCCAATATCATCGGC+CGG | + | chr1_1:23693410-23693429 | None:intergenic | 40.0% | |
| ! | CTTCTGGTCTTTCCATCATA+GGG | - | chr1_1:23693453-23693472 | Msa0014770:CDS | 40.0% |
| TTGGTGAAGGGATTTGAGTG+AGG | + | chr1_1:23691126-23691145 | None:intergenic | 45.0% | |
| !! | TTACTGAGTGTGTTGGTGGT+TGG | + | chr1_1:23691145-23691164 | None:intergenic | 45.0% |
| TCTCTTACTGAGTGTGTTGG+TGG | + | chr1_1:23691149-23691168 | None:intergenic | 45.0% | |
| TGCTCTCTTACTGAGTGTGT+TGG | + | chr1_1:23691152-23691171 | None:intergenic | 45.0% | |
| ! | GTGAGAATGTGGTGTTGGAA+AGG | + | chr1_1:23691242-23691261 | None:intergenic | 45.0% |
| TGGAAGTGAGAATGTGGTGT+TGG | + | chr1_1:23691247-23691266 | None:intergenic | 45.0% | |
| !! | AGGTGTTGGAAGTGAGAATG+TGG | + | chr1_1:23691253-23691272 | None:intergenic | 45.0% |
| ! | GTTGAAACGTGTTTTGTGGG+TGG | + | chr1_1:23691410-23691429 | None:intergenic | 45.0% |
| !! | TCAGGTACTGAAGAAGGAAG+TGG | - | chr1_1:23691547-23691566 | Msa0014770:CDS | 45.0% |
| TTCTGCTTCGTTTATTGGGG+TGG | - | chr1_1:23691714-23691733 | Msa0014770:CDS | 45.0% | |
| ! | ATGATGTTGCTTGCCGGAAA+GGG | - | chr1_1:23691770-23691789 | Msa0014770:CDS | 45.0% |
| TTGAAACCATAACCATCGGG+CGG | - | chr1_1:23692805-23692824 | Msa0014770:intron | 45.0% | |
| ! | GAATGTTTGTTGGAGCAGCT+GGG | - | chr1_1:23692874-23692893 | Msa0014770:intron | 45.0% |
| AATTGGCCCACGAAAGACAT+AGG | + | chr1_1:23692921-23692940 | None:intergenic | 45.0% | |
| TATGTCTTTCGTGGGCCAAT+TGG | - | chr1_1:23692920-23692939 | Msa0014770:CDS | 45.0% | |
| ATGTCTTTCGTGGGCCAATT+GGG | - | chr1_1:23692921-23692940 | Msa0014770:CDS | 45.0% | |
| GGATACTGTCTTATCTCTCG+AGG | - | chr1_1:23692966-23692985 | Msa0014770:CDS | 45.0% | |
| TCATCCGGTTCACTCGAATT+CGG | - | chr1_1:23692996-23693015 | Msa0014770:CDS | 45.0% | |
| AGTAGAAGCTAGGGTAGAAC+GGG | + | chr1_1:23693070-23693089 | None:intergenic | 45.0% | |
| GTGAGACGTAGTAGAAGCTA+GGG | + | chr1_1:23693079-23693098 | None:intergenic | 45.0% | |
| AGTGAGACGTAGTAGAAGCT+AGG | + | chr1_1:23693080-23693099 | None:intergenic | 45.0% | |
| !! | TGCATCGCGAAAAGCATTGT+AGG | + | chr1_1:23693228-23693247 | None:intergenic | 45.0% |
| AAATCTTAACCTTTCCCGCC+AGG | - | chr1_1:23693372-23693391 | Msa0014770:CDS | 45.0% | |
| CAAAAAATTCCTGGCGGGAA+AGG | + | chr1_1:23693384-23693403 | None:intergenic | 45.0% | |
| GGGATCAAAAAATTCCTGGC+GGG | + | chr1_1:23693389-23693408 | None:intergenic | 45.0% | |
| CGGGATCAAAAAATTCCTGG+CGG | + | chr1_1:23693390-23693409 | None:intergenic | 45.0% | |
| !!! | CGCCAGGAATTTTTTGATCC+CGG | - | chr1_1:23693388-23693407 | Msa0014770:CDS | 45.0% |
| AAGTTCCAATATCATCGGCC+GGG | + | chr1_1:23693409-23693428 | None:intergenic | 45.0% | |
| ATGGAAAGACCAGAAGGTGA+AGG | + | chr1_1:23693449-23693468 | None:intergenic | 45.0% | |
| ! | CCTATGATGGAAAGACCAGA+AGG | + | chr1_1:23693455-23693474 | None:intergenic | 45.0% |
| ! | CCTTCTGGTCTTTCCATCAT+AGG | - | chr1_1:23693452-23693471 | Msa0014770:CDS | 45.0% |
| GAGTGAGGACTGAGGAATGA+TGG | + | chr1_1:23691111-23691130 | None:intergenic | 50.0% | |
| AGGGATTTGAGTGAGGACTG+AGG | + | chr1_1:23691119-23691138 | None:intergenic | 50.0% | |
| !! | GTGTGTTGGTGGTTGGTGAA+GGG | + | chr1_1:23691138-23691157 | None:intergenic | 50.0% |
| !! | AGTGTGTTGGTGGTTGGTGA+AGG | + | chr1_1:23691139-23691158 | None:intergenic | 50.0% |
| ! | GATGATGTTGCTTGCCGGAA+AGG | - | chr1_1:23691769-23691788 | Msa0014770:CDS | 50.0% |
| ! | GGAATGTTTGTTGGAGCAGC+TGG | - | chr1_1:23692873-23692892 | Msa0014770:intron | 50.0% |
| AGGTGGACCTATGTCTTTCG+TGG | - | chr1_1:23692911-23692930 | Msa0014770:CDS | 50.0% | |
| GGTGGACCTATGTCTTTCGT+GGG | - | chr1_1:23692912-23692931 | Msa0014770:CDS | 50.0% | |
| TGTCTTATCTCTCGAGGCAC+TGG | - | chr1_1:23692972-23692991 | Msa0014770:CDS | 50.0% | |
| AATGCCCGTAGGTGCAATGT+GGG | - | chr1_1:23693028-23693047 | Msa0014770:CDS | 50.0% | |
| AGGAACCCACATTGCACCTA+CGG | + | chr1_1:23693036-23693055 | None:intergenic | 50.0% | |
| ! | TCACTTTCGGGTCTTGCAGT+TGG | - | chr1_1:23693095-23693114 | Msa0014770:CDS | 50.0% |
| !! | TAACCTGGTAATGGCTGTGC+CGG | + | chr1_1:23693195-23693214 | None:intergenic | 50.0% |
| GTAGGCAACAGTAGGTAACC+TGG | + | chr1_1:23693210-23693229 | None:intergenic | 50.0% | |
| ! | ATAGAAACTCTGGGAGCACG+TGG | + | chr1_1:23693275-23693294 | None:intergenic | 50.0% |
| CGACACTGTTGGAACTCGAA+CGG | + | chr1_1:23693333-23693352 | None:intergenic | 50.0% | |
| GGCCGGGATCAAAAAATTCC+TGG | + | chr1_1:23693393-23693412 | None:intergenic | 50.0% | |
| TTGATCCCGGCCGATGATAT+TGG | - | chr1_1:23693401-23693420 | Msa0014770:CDS | 50.0% | |
| GCATTTGCTCCTTCACCTTC+TGG | - | chr1_1:23693437-23693456 | Msa0014770:CDS | 50.0% | |
| ! | ATGTTGCTTGCCGGAAAGGG+AGG | - | chr1_1:23691773-23691792 | Msa0014770:CDS | 55.0% |
| GATATCCGCACCTCCCTTTC+CGG | + | chr1_1:23691786-23691805 | None:intergenic | 55.0% | |
| !! | GGTGATGGGTCGTCTACCAA+AGG | - | chr1_1:23691817-23691836 | Msa0014770:CDS | 55.0% |
| AAGGACACTGCAATCGGGTG+CGG | - | chr1_1:23692837-23692856 | Msa0014770:intron | 55.0% | |
| GGGTGCGGACATTGGAACAA+GGG | - | chr1_1:23692852-23692871 | Msa0014770:intron | 55.0% | |
| GTTGGAGCAGCTGGGTTGTT+AGG | - | chr1_1:23692882-23692901 | Msa0014770:intron | 55.0% | |
| AAGACATAGGTCCACCTCCG+AGG | + | chr1_1:23692908-23692927 | None:intergenic | 55.0% | |
| ACAGTATCCAAAGGCTCCGC+CGG | + | chr1_1:23692955-23692974 | None:intergenic | 55.0% | |
| !! | TCTCGAGGCACTGGATCATC+CGG | - | chr1_1:23692981-23693000 | Msa0014770:CDS | 55.0% |
| GCGTCCGAATTCGAGTGAAC+CGG | + | chr1_1:23693003-23693022 | None:intergenic | 55.0% | |
| ! | TTGCACCTACGGGCATTGCT+TGG | + | chr1_1:23693025-23693044 | None:intergenic | 55.0% |
| CAATGCCCGTAGGTGCAATG+TGG | - | chr1_1:23693027-23693046 | Msa0014770:CDS | 55.0% | |
| GGAACCCACATTGCACCTAC+GGG | + | chr1_1:23693035-23693054 | None:intergenic | 55.0% | |
| ! | CTTTCGGGTCTTGCAGTTGG+AGG | - | chr1_1:23693098-23693117 | Msa0014770:CDS | 55.0% |
| AGGAACGGGAGGAGTTGTCA+TGG | - | chr1_1:23693166-23693185 | Msa0014770:CDS | 55.0% | |
| GGAGGAGTTGTCATGGACAC+CGG | - | chr1_1:23693173-23693192 | Msa0014770:CDS | 55.0% | |
| AACGGTCCGCCCGATGGTTA+TGG | + | chr1_1:23692814-23692833 | None:intergenic | 60.0% | |
| !! | CTTGATAACGGTCCGCCCGA+TGG | + | chr1_1:23692820-23692839 | None:intergenic | 60.0% |
| CATCGGGCGGACCGTTATCA+AGG | - | chr1_1:23692818-23692837 | Msa0014770:intron | 60.0% | |
| CTGCAATCGGGTGCGGACAT+TGG | - | chr1_1:23692844-23692863 | Msa0014770:intron | 60.0% | |
| CGGGTGCGGACATTGGAACA+AGG | - | chr1_1:23692851-23692870 | Msa0014770:intron | 60.0% | |
| GCAGCTGGGTTGTTAGGCCT+CGG | - | chr1_1:23692888-23692907 | Msa0014770:intron | 60.0% | |
| GGCCAATTGGGAGCCCAAAC+CGG | - | chr1_1:23692933-23692952 | Msa0014770:CDS | 60.0% | |
| CAATTGGGAGCCCAAACCGG+CGG | - | chr1_1:23692936-23692955 | Msa0014770:CDS | 60.0% | |
| !! | TCCAAAGGCTCCGCCGGTTT+GGG | + | chr1_1:23692949-23692968 | None:intergenic | 60.0% |
| ! | ATCCAAAGGCTCCGCCGGTT+TGG | + | chr1_1:23692950-23692969 | None:intergenic | 60.0% |
| ACACCGGCACAGCCATTACC+AGG | - | chr1_1:23693189-23693208 | Msa0014770:CDS | 60.0% | |
| GCTTGCCGGAAAGGGAGGTG+CGG | - | chr1_1:23691778-23691797 | Msa0014770:CDS | 65.0% | |
| GCTGGGTTGTTAGGCCTCGG+AGG | - | chr1_1:23692891-23692910 | Msa0014770:intron | 65.0% | |
| GGGTTGTTAGGCCTCGGAGG+TGG | - | chr1_1:23692894-23692913 | Msa0014770:CDS | 65.0% | |
| !! | CGCCGGTTTGGGCTCCCAAT+TGG | + | chr1_1:23692938-23692957 | None:intergenic | 65.0% |
| GGACGCCAAGCAATGCCCGT+AGG | - | chr1_1:23693017-23693036 | Msa0014770:CDS | 65.0% | |
| GCCCAAACCGGCGGAGCCTT+TGG | - | chr1_1:23692945-23692964 | Msa0014770:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 23691038 | 23693692 | 23691038 | ID=Msa0014770;Name=Msa0014770 |
| chr1_1 | mRNA | 23691038 | 23693692 | 23691038 | ID=Msa0014770-mRNA-1;Parent=Msa0014770;Name=Msa0014770-mRNA-1;_AED=0.01;_eAED=0.01;_QI=140|1|1|1|1|1|2|139|473 |
| chr1_1 | exon | 23691038 | 23691937 | 23691038 | ID=Msa0014770-mRNA-1:exon:8209;Parent=Msa0014770-mRNA-1 |
| chr1_1 | exon | 23692892 | 23693692 | 23692892 | ID=Msa0014770-mRNA-1:exon:8208;Parent=Msa0014770-mRNA-1 |
| chr1_1 | five_prime_UTR | 23693553 | 23693692 | 23693553 | ID=Msa0014770-mRNA-1:five_prime_utr;Parent=Msa0014770-mRNA-1 |
| chr1_1 | CDS | 23692892 | 23693552 | 23692892 | ID=Msa0014770-mRNA-1:cds;Parent=Msa0014770-mRNA-1 |
| chr1_1 | CDS | 23691177 | 23691937 | 23691177 | ID=Msa0014770-mRNA-1:cds;Parent=Msa0014770-mRNA-1 |
| chr1_1 | three_prime_UTR | 23691038 | 23691176 | 23691038 | ID=Msa0014770-mRNA-1:three_prime_utr;Parent=Msa0014770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
