Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0005020 | 0.808951 | 2.406684e-50 | -8.615850e-47 |
| Msa0005020 | Msa0015570 | 0.820943 | 5.251078e-53 | -8.615850e-47 |
| Msa0005020 | Msa0016040 | 0.851991 | 6.184947e-61 | -8.615850e-47 |
| Msa0005020 | Msa0019930 | 0.852192 | 5.424276e-61 | -8.615850e-47 |
| Msa0005020 | Msa0020540 | 0.818699 | 1.710108e-52 | -8.615850e-47 |
| Msa0005020 | Msa0025160 | 0.808717 | 2.700451e-50 | -8.615850e-47 |
| Msa0005020 | Msa0025580 | 0.800709 | 1.269253e-48 | -8.615850e-47 |
| Msa0005020 | Msa0032980 | 0.834150 | 3.539424e-56 | -8.615850e-47 |
| Msa0005020 | Msa0035140 | 0.803668 | 3.123607e-49 | -8.615850e-47 |
| Msa0005020 | Msa0035380 | 0.811431 | 7.025927e-51 | -8.615850e-47 |
| Msa0005020 | Msa0037740 | 0.833245 | 5.959078e-56 | -8.615850e-47 |
| Msa0005020 | Msa0053070 | 0.953379 | 3.125273e-111 | -8.615850e-47 |
| Msa0005020 | Msa0056180 | 0.848987 | 4.317058e-60 | -8.615850e-47 |
| Msa0005020 | Msa0062340 | 0.831245 | 1.861887e-55 | -8.615850e-47 |
| Msa0005020 | Msa0065020 | 0.806042 | 9.969602e-50 | -8.615850e-47 |
| Msa0005020 | Msa0067060 | 0.822755 | 1.998857e-53 | -8.615850e-47 |
| Msa0005020 | Msa0067380 | 0.841441 | 4.743418e-58 | -8.615850e-47 |
| Msa0005020 | Msa0068150 | 0.816508 | 5.332831e-52 | -8.615850e-47 |
| Msa0005020 | Msa0072520 | 0.813075 | 3.075495e-51 | -8.615850e-47 |
| Msa0005020 | Msa0073120 | 0.808783 | 2.614359e-50 | -8.615850e-47 |
| Msa0005020 | Msa0074360 | 0.806851 | 6.730613e-50 | -8.615850e-47 |
| Msa0005020 | Msa0075530 | 0.807677 | 4.496939e-50 | -8.615850e-47 |
| Msa0005020 | Msa0077560 | 0.813760 | 2.174270e-51 | -8.615850e-47 |
| Msa0005020 | Msa0091350 | 0.819738 | 9.920009e-53 | -8.615850e-47 |
| Msa0005020 | Msa0093860 | 0.815979 | 7.004167e-52 | -8.615850e-47 |
| Msa0005020 | Msa0098410 | 0.945994 | 1.072356e-104 | -8.615850e-47 |
| Msa0005020 | Msa0103200 | 0.802829 | 4.659215e-49 | -8.615850e-47 |
| Msa0005020 | Msa0106630 | 0.806573 | 7.702414e-50 | -8.615850e-47 |
| Msa0005020 | Msa0110200 | 0.827651 | 1.390402e-54 | -8.615850e-47 |
| Msa0005020 | Msa0112670 | 0.806686 | 7.293452e-50 | -8.615850e-47 |
| Msa0005020 | Msa0115550 | 0.825418 | 4.739711e-54 | -8.615850e-47 |
| Msa0005020 | Msa0121330 | 0.801498 | 8.754649e-49 | -8.615850e-47 |
| Msa0005020 | Msa0123070 | 0.809156 | 2.174778e-50 | -8.615850e-47 |
| Msa0005020 | Msa0123320 | 0.805927 | 1.053869e-49 | -8.615850e-47 |
| Msa0005020 | Msa0125590 | 0.815588 | 8.560146e-52 | -8.615850e-47 |
| Msa0005020 | Msa0127680 | 0.817545 | 3.120283e-52 | -8.615850e-47 |
| Msa0005020 | Msa0140380 | 0.837825 | 4.136102e-57 | -8.615850e-47 |
| Msa0005020 | Msa0141640 | 0.821543 | 3.817298e-53 | -8.615850e-47 |
| Msa0005020 | Msa0143670 | 0.818823 | 1.603104e-52 | -8.615850e-47 |
| Msa0005020 | Msa0146650 | 0.803086 | 4.123159e-49 | -8.615850e-47 |
| Msa0005020 | Msa0153210 | 0.809722 | 1.643972e-50 | -8.615850e-47 |
| Msa0005020 | Msa0156050 | 0.807707 | 4.431828e-50 | -8.615850e-47 |
| Msa0005020 | Msa0156090 | 0.803327 | 3.674893e-49 | -8.615850e-47 |
| Msa0005020 | Msa0156460 | 0.829317 | 5.507764e-55 | -8.615850e-47 |
| Msa0005020 | Msa0156510 | 0.849702 | 2.728999e-60 | -8.615850e-47 |
| Msa0005020 | Msa0158900 | 0.811691 | 6.166828e-51 | -8.615850e-47 |
| Msa0005020 | Msa0159590 | 0.850697 | 1.435814e-60 | -8.615850e-47 |
| Msa0005020 | Msa0159620 | 0.837279 | 5.709690e-57 | -8.615850e-47 |
| Msa0005020 | Msa0160160 | 0.830751 | 2.462204e-55 | -8.615850e-47 |
| Msa0005020 | Msa0160170 | 0.833327 | 5.685327e-56 | -8.615850e-47 |
| Msa0005020 | Msa0165830 | 0.825826 | 3.793051e-54 | -8.615850e-47 |
| Msa0005020 | Msa0166170 | 0.812743 | 3.635153e-51 | -8.615850e-47 |
| Msa0005020 | Msa0168050 | 0.821529 | 3.847341e-53 | -8.615850e-47 |
| Msa0005020 | Msa0174290 | 0.808018 | 3.806049e-50 | -8.615850e-47 |
| Msa0005020 | Msa0176060 | 0.804007 | 2.655486e-49 | -8.615850e-47 |
| Msa0005020 | Msa0185290 | 0.815720 | 7.998257e-52 | -8.615850e-47 |
| Msa0005020 | Msa0186360 | 0.837172 | 6.078592e-57 | -8.615850e-47 |
| Msa0005020 | Msa0190570 | 0.811859 | 5.668952e-51 | -8.615850e-47 |
| Msa0005020 | Msa0190730 | 0.819121 | 1.371646e-52 | -8.615850e-47 |
| Msa0005020 | Msa0200050 | 0.833471 | 5.233309e-56 | -8.615850e-47 |
| Msa0005020 | Msa0209980 | 0.803285 | 3.749019e-49 | -8.615850e-47 |
| Msa0005020 | Msa0225610 | 0.827382 | 1.613164e-54 | -8.615850e-47 |
| Msa0005020 | Msa0232760 | 0.824763 | 6.767744e-54 | -8.615850e-47 |
| Msa0005020 | Msa0269210 | 0.815016 | 1.147394e-51 | -8.615850e-47 |
| Msa0005020 | Msa0272260 | 0.819584 | 1.075566e-52 | -8.615850e-47 |
| Msa0005020 | Msa0343010 | 0.816575 | 5.151831e-52 | -8.615850e-47 |
| Msa0005020 | Msa0367150 | 0.840516 | 8.294117e-58 | -8.615850e-47 |
| Msa0005020 | Msa0367520 | 0.834786 | 2.450354e-56 | -8.615850e-47 |
| Msa0005020 | Msa0368860 | 0.840751 | 7.199775e-58 | -8.615850e-47 |
| Msa0005020 | Msa0373170 | 0.846284 | 2.392948e-59 | -8.615850e-47 |
| Msa0005020 | Msa0373500 | 0.854893 | 9.086205e-62 | -8.615850e-47 |
| Msa0005020 | Msa0373590 | 0.803859 | 2.850148e-49 | -8.615850e-47 |
| Msa0005020 | Msa0377710 | 0.807517 | 4.863844e-50 | -8.615850e-47 |
| Msa0005020 | Msa0380490 | 0.807085 | 6.005312e-50 | -8.615850e-47 |
| Msa0005020 | Msa0380670 | 0.801628 | 8.232622e-49 | -8.615850e-47 |
| Msa0005020 | Msa0382230 | 0.812212 | 4.749384e-51 | -8.615850e-47 |
| Msa0005020 | Msa0383000 | 0.832078 | 1.160231e-55 | -8.615850e-47 |
| Msa0005020 | Msa0405620 | 0.801383 | 9.239839e-49 | -8.615850e-47 |
| Msa0005020 | Msa0413170 | 0.800550 | 1.367141e-48 | -8.615850e-47 |
| Msa0005020 | Msa0414880 | 0.802784 | 4.760821e-49 | -8.615850e-47 |
| Msa0005020 | Msa0420670 | 0.811427 | 7.040282e-51 | -8.615850e-47 |
| Msa0005020 | Msa0421130 | 0.821088 | 4.861551e-53 | -8.615850e-47 |
| Msa0005020 | Msa0421150 | 0.807103 | 5.951193e-50 | -8.615850e-47 |
| Msa0005020 | Msa0421750 | 0.854123 | 1.517399e-61 | -8.615850e-47 |
| Msa0005020 | Msa0430480 | 0.815110 | 1.093562e-51 | -8.615850e-47 |
| Msa0005020 | Msa0431200 | 0.806769 | 7.002764e-50 | -8.615850e-47 |
| Msa0005020 | Msa0432010 | 0.836303 | 1.012478e-56 | -8.615850e-47 |
| Msa0005020 | Msa0433150 | 0.821873 | 3.202662e-53 | -8.615850e-47 |
| Msa0005020 | Msa0433760 | 0.833017 | 6.787442e-56 | -8.615850e-47 |
| Msa0005020 | Msa0443410 | 0.800559 | 1.361722e-48 | -8.615850e-47 |
| Msa0005020 | Msa0447750 | 0.822523 | 2.262946e-53 | -8.615850e-47 |
| Msa0005020 | Msa0454560 | 0.827413 | 1.586540e-54 | -8.615850e-47 |
| Msa0005020 | Msa0456670 | 0.835786 | 1.370129e-56 | -8.615850e-47 |
| Msa0005020 | Msa0459740 | 0.824488 | 7.855467e-54 | -8.615850e-47 |
| Msa0005020 | Msa0462780 | 0.845944 | 2.961320e-59 | -8.615850e-47 |
| Msa0005020 | Msa0466520 | 0.826058 | 3.341538e-54 | -8.615850e-47 |
| Msa0005020 | Msa0466880 | 0.825113 | 5.595040e-54 | -8.615850e-47 |
| Msa0005020 | Msa0467690 | 0.851060 | 1.134675e-60 | -8.615850e-47 |
| Msa0005020 | Msa0468620 | 0.833683 | 4.633376e-56 | -8.615850e-47 |
| Msa0005020 | Msa0468700 | 0.806112 | 9.633797e-50 | -8.615850e-47 |
| Msa0005020 | Msa0477630 | 0.826915 | 2.087106e-54 | -8.615850e-47 |
| Msa0005020 | Msa0480730 | 0.818568 | 1.831968e-52 | -8.615850e-47 |
| Msa0005020 | Msa0481890 | 0.860583 | 1.867258e-63 | -8.615850e-47 |
| Msa0005020 | Msa0500570 | 0.804877 | 1.749506e-49 | -8.615850e-47 |
| Msa0005020 | Msa0502510 | 0.820835 | 5.559416e-53 | -8.615850e-47 |
| Msa0005020 | Msa0503990 | 0.801042 | 1.084913e-48 | -8.615850e-47 |
| Msa0005020 | Msa0504720 | 0.835820 | 1.343295e-56 | -8.615850e-47 |
| Msa0005020 | Msa0507020 | 0.818170 | 2.254436e-52 | -8.615850e-47 |
| Msa0005020 | Msa0512530 | 0.819452 | 1.152703e-52 | -8.615850e-47 |
| Msa0005020 | Msa0513080 | 0.800083 | 1.702029e-48 | -8.615850e-47 |
| Msa0005020 | Msa0513560 | 0.826327 | 2.882413e-54 | -8.615850e-47 |
| Msa0005020 | Msa0513620 | 0.807212 | 5.643786e-50 | -8.615850e-47 |
| Msa0005020 | Msa0514020 | 0.852399 | 4.735189e-61 | -8.615850e-47 |
| Msa0005020 | Msa0514500 | 0.832231 | 1.063462e-55 | -8.615850e-47 |
| Msa0005020 | Msa0514580 | 0.807934 | 3.966151e-50 | -8.615850e-47 |
| Msa0005020 | Msa0520260 | 0.806219 | 9.149418e-50 | -8.615850e-47 |
| Msa0005020 | Msa0520680 | 0.806878 | 6.641057e-50 | -8.615850e-47 |
| Msa0005020 | Msa0520870 | 0.851188 | 1.044041e-60 | -8.615850e-47 |
| Msa0005020 | Msa0521680 | 0.846721 | 1.818048e-59 | -8.615850e-47 |
| Msa0005020 | Msa0523380 | 0.809573 | 1.770077e-50 | -8.615850e-47 |
| Msa0005020 | Msa0527850 | 0.800342 | 1.507617e-48 | -8.615850e-47 |
| Msa0005020 | Msa0531960 | 0.834021 | 3.813249e-56 | -8.615850e-47 |
| Msa0005020 | Msa0532050 | 0.866525 | 2.675275e-65 | -8.615850e-47 |
| Msa0005020 | Msa0532160 | 0.829917 | 3.935285e-55 | -8.615850e-47 |
| Msa0005020 | Msa0534100 | 0.819894 | 9.136394e-53 | -8.615850e-47 |
| Msa0005020 | Msa0545920 | 0.820692 | 5.997168e-53 | -8.615850e-47 |
| Msa0005020 | Msa0548000 | 0.807558 | 4.766501e-50 | -8.615850e-47 |
| Msa0005020 | Msa0550590 | 0.849476 | 3.155417e-60 | -8.615850e-47 |
| Msa0005020 | Msa0553750 | 0.818846 | 1.584167e-52 | -8.615850e-47 |
| Msa0005020 | Msa0554300 | 0.817885 | 2.615131e-52 | -8.615850e-47 |
| Msa0005020 | Msa0559100 | 0.822544 | 2.238639e-53 | -8.615850e-47 |
| Msa0005020 | Msa0561560 | 0.825282 | 5.102690e-54 | -8.615850e-47 |
| Msa0005020 | Msa0563740 | 0.833534 | 5.046183e-56 | -8.615850e-47 |
| Msa0005020 | Msa0563900 | 0.830486 | 2.859096e-55 | -8.615850e-47 |
| Msa0005020 | Msa0567170 | 0.828777 | 7.443181e-55 | -8.615850e-47 |
| Msa0005020 | Msa0569530 | 0.816927 | 4.296299e-52 | -8.615850e-47 |
| Msa0005020 | Msa0571620 | 0.817105 | 3.918261e-52 | -8.615850e-47 |
| Msa0005020 | Msa0572830 | 0.815653 | 8.278241e-52 | -8.615850e-47 |
| Msa0005020 | Msa0577280 | 0.838632 | 2.562552e-57 | -8.615850e-47 |
| Msa0005020 | Msa0577330 | 0.841470 | 4.661628e-58 | -8.615850e-47 |
| Msa0005020 | Msa0577450 | 0.804040 | 2.614872e-49 | -8.615850e-47 |
| Msa0005020 | Msa0577820 | 0.813276 | 2.777821e-51 | -8.615850e-47 |
| Msa0005020 | Msa0580810 | 0.826305 | 2.918447e-54 | -8.615850e-47 |
| Msa0005020 | Msa0581840 | 0.834319 | 3.209952e-56 | -8.615850e-47 |
| Msa0005020 | Msa0586200 | 0.806793 | 6.920560e-50 | -8.615850e-47 |
| Msa0005020 | Msa0588920 | 0.840474 | 8.510676e-58 | -8.615850e-47 |
| Msa0005020 | Msa0590200 | 0.840840 | 6.822587e-58 | -8.615850e-47 |
| Msa0005020 | Msa0593400 | 0.851070 | 1.127170e-60 | -8.615850e-47 |
| Msa0005020 | Msa0601720 | 0.825465 | 4.619967e-54 | -8.615850e-47 |
| Msa0005020 | Msa0603410 | 0.801489 | 8.788394e-49 | -8.615850e-47 |
| Msa0005020 | Msa0606100 | 0.861445 | 1.021168e-63 | -8.615850e-47 |
| Msa0005020 | Msa0606580 | 0.840242 | 9.782218e-58 | -8.615850e-47 |
| Msa0005020 | Msa0607800 | 0.872999 | 2.064598e-67 | -8.615850e-47 |
| Msa0005020 | Msa0608350 | 0.800418 | 1.454684e-48 | -8.615850e-47 |
| Msa0005020 | Msa0613580 | 0.819683 | 1.021085e-52 | -8.615850e-47 |
| Msa0005020 | Msa0613630 | 0.831974 | 1.231129e-55 | -8.615850e-47 |
| Msa0005020 | Msa0615630 | 0.841586 | 4.344131e-58 | -8.615850e-47 |
| Msa0005020 | Msa0620500 | 0.838420 | 2.906127e-57 | -8.615850e-47 |
| Msa0005020 | Msa0621710 | 0.841299 | 5.169187e-58 | -8.615850e-47 |
| Msa0005020 | Msa0622920 | 0.838965 | 2.101054e-57 | -8.615850e-47 |
| Msa0005020 | Msa0625620 | 0.809420 | 1.909262e-50 | -8.615850e-47 |
| Msa0005020 | Msa0630660 | 0.820147 | 7.995671e-53 | -8.615850e-47 |
| Msa0005020 | Msa0641990 | 0.818737 | 1.676884e-52 | -8.615850e-47 |
| Msa0005020 | Msa0647050 | 0.855179 | 7.504819e-62 | -8.615850e-47 |
| Msa0005020 | Msa0647280 | 0.837499 | 5.014561e-57 | -8.615850e-47 |
| Msa0005020 | Msa0647440 | 0.820418 | 6.930647e-53 | -8.615850e-47 |
| Msa0005020 | Msa0648040 | 0.873381 | 1.537269e-67 | -8.615850e-47 |
| Msa0005020 | Msa0648760 | 0.824321 | 8.599280e-54 | -8.615850e-47 |
| Msa0005020 | Msa0657210 | 0.805575 | 1.249265e-49 | -8.615850e-47 |
| Msa0005020 | Msa0657700 | 0.815757 | 7.848228e-52 | -8.615850e-47 |
| Msa0005020 | Msa0658640 | 0.805309 | 1.420458e-49 | -8.615850e-47 |
| Msa0005020 | Msa0659370 | 0.800993 | 1.110249e-48 | -8.615850e-47 |
| Msa0005020 | Msa0666700 | 0.825736 | 3.984040e-54 | -8.615850e-47 |
| Msa0005020 | Msa0668900 | 0.847884 | 8.718102e-60 | -8.615850e-47 |
| Msa0005020 | Msa0681050 | 0.825714 | 4.032101e-54 | -8.615850e-47 |
| Msa0005020 | Msa0686800 | 0.834146 | 3.548293e-56 | -8.615850e-47 |
| Msa0005020 | Msa0687090 | 0.819814 | 9.529689e-53 | -8.615850e-47 |
| Msa0005020 | Msa0688380 | 0.810827 | 9.497992e-51 | -8.615850e-47 |
| Msa0005020 | Msa0690320 | 0.803837 | 2.880939e-49 | -8.615850e-47 |
| Msa0005020 | Msa0690740 | 0.878178 | 3.463738e-69 | -8.615850e-47 |
| Msa0005020 | Msa0691270 | 0.805756 | 1.144763e-49 | -8.615850e-47 |
| Msa0005020 | Msa0698730 | 0.824235 | 9.007100e-54 | -8.615850e-47 |
| Msa0005020 | Msa0701250 | 0.802431 | 5.627663e-49 | -8.615850e-47 |
| Msa0005020 | Msa0702810 | 0.814984 | 1.165909e-51 | -8.615850e-47 |
| Msa0005020 | Msa0703600 | 0.829910 | 3.950331e-55 | -8.615850e-47 |
| Msa0005020 | Msa0709200 | 0.831310 | 1.795000e-55 | -8.615850e-47 |
| Msa0005020 | Msa0709440 | 0.861497 | 9.844322e-64 | -8.615850e-47 |
| Msa0005020 | Msa0713920 | 0.831721 | 1.421856e-55 | -8.615850e-47 |
| Msa0005020 | Msa0714520 | 0.855739 | 5.153712e-62 | -8.615850e-47 |
| Msa0005020 | Msa0714790 | 0.826306 | 2.916759e-54 | -8.615850e-47 |
| Msa0005020 | Msa0716480 | 0.836706 | 7.995815e-57 | -8.615850e-47 |
| Msa0005020 | Msa0717830 | 0.821538 | 3.829375e-53 | -8.615850e-47 |
| Msa0005020 | Msa0717900 | 0.829335 | 5.452319e-55 | -8.615850e-47 |
| Msa0005020 | Msa0728770 | 0.803244 | 3.823936e-49 | -8.615850e-47 |
| Msa0005020 | Msa0728780 | 0.819382 | 1.196047e-52 | -8.615850e-47 |
| Msa0005020 | Msa0735780 | 0.819330 | 1.228891e-52 | -8.615850e-47 |
| Msa0005020 | Msa0740710 | 0.820354 | 7.169011e-53 | -8.615850e-47 |
| Msa0005020 | Msa0743440 | 0.853823 | 1.852288e-61 | -8.615850e-47 |
| Msa0005020 | Msa0745720 | 0.833349 | 5.613153e-56 | -8.615850e-47 |
| Msa0005020 | Msa0747740 | 0.940632 | 1.674997e-100 | -8.615850e-47 |
| Msa0005020 | Msa0754430 | 0.806556 | 7.767249e-50 | -8.615850e-47 |
| Msa0005020 | Msa0754450 | 0.805489 | 1.302115e-49 | -8.615850e-47 |
| Msa0005020 | Msa0755760 | 0.805395 | 1.363070e-49 | -8.615850e-47 |
| Msa0005020 | Msa0756180 | 0.825903 | 3.636233e-54 | -8.615850e-47 |
| Msa0005020 | Msa0756820 | 0.827567 | 1.457103e-54 | -8.615850e-47 |
| Msa0005020 | Msa0758590 | 0.827200 | 1.784288e-54 | -8.615850e-47 |
| Msa0005020 | Msa0758650 | 0.817361 | 3.431709e-52 | -8.615850e-47 |
| Msa0005020 | Msa0765810 | 0.833368 | 5.551598e-56 | -8.615850e-47 |
| Msa0005020 | Msa0769730 | 0.813250 | 2.814568e-51 | -8.615850e-47 |
| Msa0005020 | Msa0773630 | 0.861912 | 7.351336e-64 | -8.615850e-47 |
| Msa0005020 | Msa0777750 | 0.806060 | 9.880338e-50 | -8.615850e-47 |
| Msa0005020 | Msa0778550 | 0.822241 | 2.631525e-53 | -8.615850e-47 |
| Msa0005020 | Msa0778600 | 0.832760 | 7.863982e-56 | -8.615850e-47 |
| Msa0005020 | Msa0780910 | 0.851760 | 7.194791e-61 | -8.615850e-47 |
| Msa0005020 | Msa0800660 | 0.827845 | 1.249325e-54 | -8.615850e-47 |
| Msa0005020 | Msa0805680 | 0.823936 | 1.059049e-53 | -8.615850e-47 |
| Msa0005020 | Msa0811020 | 0.849183 | 3.807058e-60 | -8.615850e-47 |
| Msa0005020 | Msa0815970 | 0.802881 | 4.544917e-49 | -8.615850e-47 |
| Msa0005020 | Msa0816080 | 0.834127 | 3.586046e-56 | -8.615850e-47 |
| Msa0005020 | Msa0818130 | 0.809687 | 1.672780e-50 | -8.615850e-47 |
| Msa0005020 | Msa0818150 | 0.829510 | 4.945568e-55 | -8.615850e-47 |
| Msa0005020 | Msa0818880 | 0.831240 | 1.867686e-55 | -8.615850e-47 |
| Msa0005020 | Msa0821160 | 0.847358 | 1.216113e-59 | -8.615850e-47 |
| Msa0005020 | Msa0824450 | 0.813991 | 1.933326e-51 | -8.615850e-47 |
| Msa0005020 | Msa0828970 | 0.816366 | 5.738671e-52 | -8.615850e-47 |
| Msa0005020 | Msa0837460 | 0.839080 | 1.962716e-57 | -8.615850e-47 |
| Msa0005020 | Msa0838240 | 0.827634 | 1.404249e-54 | -8.615850e-47 |
| Msa0005020 | Msa0851300 | 0.817942 | 2.537869e-52 | -8.615850e-47 |
| Msa0005020 | Msa0855230 | 0.802842 | 4.630445e-49 | -8.615850e-47 |
| Msa0005020 | Msa0863620 | 0.852423 | 4.662155e-61 | -8.615850e-47 |
| Msa0005020 | Msa0866530 | 0.820112 | 8.145236e-53 | -8.615850e-47 |
| Msa0005020 | Msa0867110 | 0.831995 | 1.216841e-55 | -8.615850e-47 |
| Msa0005020 | Msa0879920 | 0.809016 | 2.330400e-50 | -8.615850e-47 |
| Msa0005020 | Msa0888790 | 0.834864 | 2.342248e-56 | -8.615850e-47 |
| Msa0005020 | Msa0900760 | 0.829543 | 4.853873e-55 | -8.615850e-47 |
| Msa0005020 | Msa0909760 | 0.842398 | 2.649185e-58 | -8.615850e-47 |
| Msa0005020 | Msa0915520 | 0.810272 | 1.251541e-50 | -8.615850e-47 |
| Msa0005020 | Msa0924430 | 0.802791 | 4.743279e-49 | -8.615850e-47 |
| Msa0005020 | Msa0926310 | 0.836708 | 7.988076e-57 | -8.615850e-47 |
| Msa0005020 | Msa0931590 | 0.853361 | 2.514234e-61 | -8.615850e-47 |
| Msa0005020 | Msa0944010 | 0.813773 | 2.160397e-51 | -8.615850e-47 |
| Msa0005020 | Msa0966320 | 0.837612 | 4.691188e-57 | -8.615850e-47 |
| Msa0005020 | Msa0966480 | 0.838654 | 2.528792e-57 | -8.615850e-47 |
| Msa0005020 | Msa0980290 | 0.807365 | 5.237895e-50 | -8.615850e-47 |
| Msa0005020 | Msa0989370 | 0.839860 | 1.230713e-57 | -8.615850e-47 |
| Msa0005020 | Msa0997920 | 0.809728 | 1.639010e-50 | -8.615850e-47 |
| Msa0005020 | Msa1000780 | 0.828134 | 1.064434e-54 | -8.615850e-47 |
| Msa0005020 | Msa1002640 | 0.859471 | 4.041876e-63 | -8.615850e-47 |
| Msa0005020 | Msa1008670 | 0.846462 | 2.138938e-59 | -8.615850e-47 |
| Msa0005020 | Msa1008680 | 0.802548 | 5.324605e-49 | -8.615850e-47 |
| Msa0005020 | Msa1015250 | 0.806590 | 7.640790e-50 | -8.615850e-47 |
| Msa0005020 | Msa1033920 | 0.840877 | 6.671675e-58 | -8.615850e-47 |
| Msa0005020 | Msa1035610 | 0.802735 | 4.872610e-49 | -8.615850e-47 |
| Msa0005020 | Msa1035650 | 0.823927 | 1.063963e-53 | -8.615850e-47 |
| Msa0005020 | Msa1042880 | 0.834963 | 2.210893e-56 | -8.615850e-47 |
| Msa0005020 | Msa1059020 | 0.823283 | 1.505667e-53 | -8.615850e-47 |
| Msa0005020 | Msa1060900 | 0.810847 | 9.401863e-51 | -8.615850e-47 |
| Msa0005020 | Msa1076020 | 0.849093 | 4.033046e-60 | -8.615850e-47 |
| Msa0005020 | Msa1078880 | 0.839045 | 2.004260e-57 | -8.615850e-47 |
| Msa0005020 | Msa1078970 | 0.828800 | 7.349623e-55 | -8.615850e-47 |
| Msa0005020 | Msa1082200 | 0.810155 | 1.326829e-50 | -8.615850e-47 |
| Msa0005020 | Msa1082380 | 0.830829 | 2.356106e-55 | -8.615850e-47 |
| Msa0005020 | Msa1084530 | 0.864899 | 8.724739e-65 | -8.615850e-47 |
| Msa0005020 | Msa1092420 | 0.812113 | 4.992361e-51 | -8.615850e-47 |
| Msa0005020 | Msa1104110 | 0.823622 | 1.254536e-53 | -8.615850e-47 |
| Msa0005020 | Msa1104220 | 0.804998 | 1.650330e-49 | -8.615850e-47 |
| Msa0005020 | Msa1114630 | 0.800783 | 1.225907e-48 | -8.615850e-47 |
| Msa0005020 | Msa1116190 | 0.841008 | 6.163107e-58 | -8.615850e-47 |
| Msa0005020 | Msa1116660 | 0.809743 | 1.626984e-50 | -8.615850e-47 |
| Msa0005020 | Msa1125820 | 0.866590 | 2.550879e-65 | -8.615850e-47 |
| Msa0005020 | Msa1125990 | 0.866882 | 2.060403e-65 | -8.615850e-47 |
| Msa0005020 | Msa1127280 | 0.844912 | 5.635709e-59 | -8.615850e-47 |
| Msa0005020 | Msa1127470 | 0.827309 | 1.680055e-54 | -8.615850e-47 |
| Msa0005020 | Msa1130420 | 0.815170 | 1.060362e-51 | -8.615850e-47 |
| Msa0005020 | Msa1132530 | 0.835723 | 1.420969e-56 | -8.615850e-47 |
| Msa0005020 | Msa1139050 | 0.838626 | 2.571025e-57 | -8.615850e-47 |
| Msa0005020 | Msa1147700 | 0.811483 | 6.844986e-51 | -8.615850e-47 |
| Msa0005020 | Msa1147910 | 0.826682 | 2.373080e-54 | -8.615850e-47 |
| Msa0005020 | Msa1148630 | 0.811011 | 8.663781e-51 | -8.615850e-47 |
| Msa0005020 | Msa1149450 | 0.813988 | 1.936696e-51 | -8.615850e-47 |
| Msa0005020 | Msa1159590 | 0.824778 | 6.712457e-54 | -8.615850e-47 |
| Msa0005020 | Msa1162180 | 0.802168 | 6.377548e-49 | -8.615850e-47 |
| Msa0005020 | Msa1162880 | 0.837715 | 4.412615e-57 | -8.615850e-47 |
| Msa0005020 | Msa1163180 | 0.855066 | 8.096874e-62 | -8.615850e-47 |
| Msa0005020 | Msa1165480 | 0.839161 | 1.869381e-57 | -8.615850e-47 |
| Msa0005020 | Msa1169190 | 0.836087 | 1.149029e-56 | -8.615850e-47 |
| Msa0005020 | Msa1171070 | 0.805755 | 1.145532e-49 | -8.615850e-47 |
| Msa0005020 | Msa1171290 | 0.856176 | 3.840225e-62 | -8.615850e-47 |
| Msa0005020 | Msa1188790 | 0.820063 | 8.359595e-53 | -8.615850e-47 |
| Msa0005020 | Msa1190390 | 0.870449 | 1.447043e-66 | -8.615850e-47 |
| Msa0005020 | Msa1192570 | 0.817916 | 2.572552e-52 | -8.615850e-47 |
| Msa0005020 | Msa1201780 | 0.845618 | 3.629973e-59 | -8.615850e-47 |
| Msa0005020 | Msa1211640 | 0.810004 | 1.429672e-50 | -8.615850e-47 |
| Msa0005020 | Msa1213830 | 0.847733 | 9.594758e-60 | -8.615850e-47 |
| Msa0005020 | Msa1214350 | 0.859463 | 4.066322e-63 | -8.615850e-47 |
| Msa0005020 | Msa1215980 | 0.839009 | 2.047651e-57 | -8.615850e-47 |
| Msa0005020 | Msa1218820 | 0.871914 | 4.753937e-67 | -8.615850e-47 |
| Msa0005020 | Msa1219770 | 0.804691 | 1.913205e-49 | -8.615850e-47 |
| Msa0005020 | Msa1220030 | 0.829563 | 4.801126e-55 | -8.615850e-47 |
| Msa0005020 | Msa1220170 | 0.818419 | 1.979860e-52 | -8.615850e-47 |
| Msa0005020 | Msa1223390 | 0.809340 | 1.985900e-50 | -8.615850e-47 |
| Msa0005020 | Msa1226520 | 0.804617 | 1.982104e-49 | -8.615850e-47 |
| Msa0005020 | Msa1244240 | 0.843879 | 1.068062e-58 | -8.615850e-47 |
| Msa0005020 | Msa1252790 | 0.800255 | 1.570351e-48 | -8.615850e-47 |
| Msa0005020 | Msa1254420 | 0.821042 | 4.982919e-53 | -8.615850e-47 |
| Msa0005020 | Msa1254540 | 0.861986 | 6.973314e-64 | -8.615850e-47 |
| Msa0005020 | Msa1260710 | 0.807958 | 3.918826e-50 | -8.615850e-47 |
| Msa0005020 | Msa1261050 | 0.843098 | 1.726293e-58 | -8.615850e-47 |
| Msa0005020 | Msa1262590 | 0.806521 | 7.902480e-50 | -8.615850e-47 |
| Msa0005020 | Msa1263740 | 0.835314 | 1.803484e-56 | -8.615850e-47 |
| Msa0005020 | Msa1263780 | 0.858240 | 9.438113e-63 | -8.615850e-47 |
| Msa0005020 | Msa1263900 | 0.839685 | 1.366526e-57 | -8.615850e-47 |
| Msa0005020 | Msa1267930 | 0.802365 | 5.808959e-49 | -8.615850e-47 |
| Msa0005020 | Msa1268540 | 0.832109 | 1.140248e-55 | -8.615850e-47 |
| Msa0005020 | Msa1279120 | 0.804965 | 1.677085e-49 | -8.615850e-47 |
| Msa0005020 | Msa1294460 | 0.828151 | 1.054500e-54 | -8.615850e-47 |
| Msa0005020 | Msa1294790 | 0.838408 | 2.928144e-57 | -8.615850e-47 |
| Msa0005020 | Msa1300460 | 0.869071 | 4.074281e-66 | -8.615850e-47 |
| Msa0005020 | Msa1301700 | 0.810011 | 1.425049e-50 | -8.615850e-47 |
| Msa0005020 | Msa1301820 | 0.800398 | 1.468557e-48 | -8.615850e-47 |
| Msa0005020 | Msa1305780 | 0.832202 | 1.081434e-55 | -8.615850e-47 |
| Msa0005020 | Msa1305920 | 0.816073 | 6.673343e-52 | -8.615850e-47 |
| Msa0005020 | Msa1306570 | 0.815434 | 9.265252e-52 | -8.615850e-47 |
| Msa0005020 | Msa1306790 | 0.827779 | 1.295673e-54 | -8.615850e-47 |
| Msa0005020 | Msa1308850 | 0.802949 | 4.401224e-49 | -8.615850e-47 |
| Msa0005020 | Msa1314940 | 0.802201 | 6.277177e-49 | -8.615850e-47 |
| Msa0005020 | Msa1321530 | 0.815395 | 9.450940e-52 | -8.615850e-47 |
| Msa0005020 | Msa1332950 | 0.856307 | 3.515940e-62 | -8.615850e-47 |
| Msa0005020 | Msa1338210 | 0.814739 | 1.321627e-51 | -8.615850e-47 |
| Msa0005020 | Msa1339170 | 0.857957 | 1.145251e-62 | -8.615850e-47 |
| Msa0005020 | Msa1343170 | 0.800151 | 1.648937e-48 | -8.615850e-47 |
| Msa0005020 | Msa1343180 | 0.822775 | 1.977440e-53 | -8.615850e-47 |
| Msa0005020 | Msa1356060 | 0.826516 | 2.598842e-54 | -8.615850e-47 |
| Msa0005020 | Msa1361930 | 0.812798 | 3.536148e-51 | -8.615850e-47 |
| Msa0005020 | Msa1362130 | 0.831329 | 1.775563e-55 | -8.615850e-47 |
| Msa0005020 | Msa1364410 | 0.833807 | 4.313037e-56 | -8.615850e-47 |
| Msa0005020 | Msa1364680 | 0.818149 | 2.278959e-52 | -8.615850e-47 |
| Msa0005020 | Msa1365500 | 0.807146 | 5.829730e-50 | -8.615850e-47 |
| Msa0005020 | Msa1366150 | 0.824800 | 6.632714e-54 | -8.615850e-47 |
| Msa0005020 | Msa1367180 | 0.841343 | 5.034636e-58 | -8.615850e-47 |
| Msa0005020 | Msa1368750 | 0.833622 | 4.798414e-56 | -8.615850e-47 |
| Msa0005020 | Msa1374790 | 0.833633 | 4.767210e-56 | -8.615850e-47 |
| Msa0005020 | Msa1375350 | 0.820484 | 6.693465e-53 | -8.615850e-47 |
| Msa0005020 | Msa1380120 | 0.825233 | 5.240331e-54 | -8.615850e-47 |
| Msa0005020 | Msa1381470 | 0.848239 | 6.956926e-60 | -8.615850e-47 |
| Msa0005020 | Msa1384150 | 0.817969 | 2.502789e-52 | -8.615850e-47 |
| Msa0005020 | Msa1387440 | 0.833428 | 5.364904e-56 | -8.615850e-47 |
| Msa0005020 | Msa1387500 | 0.812901 | 3.356881e-51 | -8.615850e-47 |
| Msa0005020 | Msa1393560 | 0.813754 | 2.180795e-51 | -8.615850e-47 |
| Msa0005020 | Msa1397270 | 0.824618 | 7.322888e-54 | -8.615850e-47 |
| Msa0005020 | Msa1399190 | 0.844558 | 7.018700e-59 | -8.615850e-47 |
| Msa0005020 | Msa1406720 | 0.831578 | 1.542012e-55 | -8.615850e-47 |
| Msa0005020 | Msa1409410 | 0.804453 | 2.144990e-49 | -8.615850e-47 |
| Msa0005020 | Msa1417060 | 0.836303 | 1.012493e-56 | -8.615850e-47 |
| Msa0005020 | Msa1426320 | 0.825949 | 3.546035e-54 | -8.615850e-47 |
| Msa0005020 | Msa1429070 | 0.816788 | 4.615787e-52 | -8.615850e-47 |
| Msa0005020 | Msa1434380 | 0.819643 | 1.042670e-52 | -8.615850e-47 |
| Msa0005020 | Msa1434640 | 0.825826 | 3.791826e-54 | -8.615850e-47 |
| Msa0005020 | Msa1435100 | 0.805671 | 1.192864e-49 | -8.615850e-47 |
| Msa0005020 | Msa1439730 | 0.815182 | 1.053973e-51 | -8.615850e-47 |
| Msa0005020 | Msa1442260 | 0.833761 | 4.427915e-56 | -8.615850e-47 |
| Msa0005020 | Msa1445120 | 0.814709 | 1.341882e-51 | -8.615850e-47 |
| Msa0005020 | Msa1446100 | 0.811931 | 5.469250e-51 | -8.615850e-47 |
| Msa0005020 | Msa1447170 | 0.839017 | 2.037505e-57 | -8.615850e-47 |
| Msa0005020 | Msa1450190 | 0.830257 | 3.251447e-55 | -8.615850e-47 |
| Msa0005020 | Msa1451820 | 0.834226 | 3.387473e-56 | -8.615850e-47 |
| Msa0005020 | Msa1454010 | 0.808617 | 2.835588e-50 | -8.615850e-47 |
| Msa0005020 | Msa1457840 | 0.805293 | 1.431607e-49 | -8.615850e-47 |
| Msa0005020 | Msa1459010 | 0.819089 | 1.394699e-52 | -8.615850e-47 |
| Msa0005020 | Msa1462490 | 0.818670 | 1.736218e-52 | -8.615850e-47 |
| Msa0005020 | Msa1465360 | 0.833688 | 4.618923e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0005020 | MtrunA17_Chr1g0151731 | 89.107 | 560 | 26 | 3 | 1 | 559 | 1 | 526 | 0.0 | 1011 |
| Msa0005020 | MtrunA17_Chr6g0488071 | 29.372 | 446 | 256 | 10 | 1 | 438 | 1 | 395 | 6.54e-43 | 160 |
| Msa0005020 | MtrunA17_Chr6g0488141 | 28.634 | 454 | 249 | 12 | 1 | 447 | 1 | 386 | 2.18e-40 | 152 |
| Msa0005020 | MtrunA17_Chr6g0488291 | 31.835 | 267 | 162 | 7 | 1 | 257 | 1 | 257 | 2.95e-21 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0005020 | AT5G11780.1 | 32.353 | 544 | 281 | 19 | 13 | 548 | 16 | 480 | 4.42e-68 | 229 |
Find 151 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACTTCCTGACTGCTTTAT+TGG | 0.164340 | 1_1:+7461802 | Msa0005020:CDS |
| ATTTATCGTTTGATGGGTTT+TGG | 0.172397 | 1_1:+7460392 | Msa0005020:CDS |
| TGTGACGGTGGTGGTGAATC+TGG | 0.185538 | 1_1:+7460575 | Msa0005020:CDS |
| TCCATGTATAGAACTTAAAA+AGG | 0.209498 | 1_1:-7463657 | None:intergenic |
| TCCATGTATAGAAGTTAAAA+AGG | 0.215610 | 1_1:-7463723 | None:intergenic |
| GAACACGGATTGGCAATATT+TGG | 0.248245 | 1_1:+7463554 | Msa0005020:CDS |
| AACTTCACTGGTTGCGGTTA+AGG | 0.257652 | 1_1:+7460286 | Msa0005020:CDS |
| TTTCTCAGTTCCAAACAAAA+TGG | 0.266281 | 1_1:+7460040 | Msa0005020:exon |
| CTCAAGTAACCTCTCTATAA+AGG | 0.292180 | 1_1:-7462085 | None:intergenic |
| TTCCCATTCAATTGATCAAC+TGG | 0.297157 | 1_1:+7463165 | Msa0005020:CDS |
| GGGTTGTGAGGTTGGTTATT+TGG | 0.299959 | 1_1:+7460667 | Msa0005020:CDS |
| AATTGATAGCGAAATCTTTC+AGG | 0.305089 | 1_1:-7462951 | None:intergenic |
| TGATGCTAGAGTTGGGGTTT+TGG | 0.312253 | 1_1:+7460511 | Msa0005020:CDS |
| TGAGGTGAAATCGGTGAAAT+TGG | 0.317673 | 1_1:-7460159 | None:intergenic |
| GGTAGCACCGTTGCGGTATT+CGG | 0.322536 | 1_1:-7460138 | None:intergenic |
| TGTGAGGTTGGTTATTTGGC+TGG | 0.324431 | 1_1:+7460671 | Msa0005020:CDS |
| TTCAGGTTATGACGGGGTTT+CGG | 0.342353 | 1_1:+7460792 | Msa0005020:CDS |
| GTTGCATGCTGCAGCAGTTC+AGG | 0.345498 | 1_1:+7460775 | Msa0005020:CDS |
| AAGAGTGAAGTTGAGGTTAA+TGG | 0.346324 | 1_1:+7460485 | Msa0005020:CDS |
| GTTTGAGATTTATCGTTTGA+TGG | 0.347535 | 1_1:+7460385 | Msa0005020:CDS |
| GCAATATTTGGTTGTGGAAC+TGG | 0.348987 | 1_1:+7463566 | Msa0005020:CDS |
| ACTTCACTGGTTGCGGTTAA+GGG | 0.353217 | 1_1:+7460287 | Msa0005020:CDS |
| GTGAGGTTGGTTATTTGGCT+GGG | 0.359801 | 1_1:+7460672 | Msa0005020:CDS |
| CCCTTGAATTTCATACTAAT+AGG | 0.362321 | 1_1:+7460246 | Msa0005020:CDS |
| GGTTCGGAAGGGGATTGAAA+TGG | 0.367232 | 1_1:+7460646 | Msa0005020:CDS |
| TTTGCCAGTGATCTCCTTGC+TGG | 0.370811 | 1_1:+7461866 | Msa0005020:CDS |
| TCAAGTAACCTCTCTATAAA+GGG | 0.371840 | 1_1:-7462084 | None:intergenic |
| GTTCGGAAGGGGATTGAAAT+GGG | 0.378899 | 1_1:+7460647 | Msa0005020:CDS |
| TGAAAGATTTCGCTATCAAT+TGG | 0.402702 | 1_1:+7462953 | Msa0005020:CDS |
| ATTGAAATGGGTTGTGAGGT+TGG | 0.406186 | 1_1:+7460659 | Msa0005020:CDS |
| ACCTATTAGTATGAAATTCA+AGG | 0.406338 | 1_1:-7460247 | None:intergenic |
| TGAGTGATGGGGTTCGGAAG+GGG | 0.411569 | 1_1:+7460636 | Msa0005020:CDS |
| GTGACGGTGGTGGTGAATCT+GGG | 0.413825 | 1_1:+7460576 | Msa0005020:CDS |
| AAGGAGATCACTGGCAAAGC+TGG | 0.420916 | 1_1:-7461861 | None:intergenic |
| TTCTAGAACTTCACTGGTTG+CGG | 0.421114 | 1_1:+7460280 | Msa0005020:CDS |
| TACAGGGAAAAGGGTGATCA+TGG | 0.421383 | 1_1:+7463101 | Msa0005020:intron |
| AATGGTGGTGATGCTAGAGT+TGG | 0.423330 | 1_1:+7460503 | Msa0005020:CDS |
| TAGAACCACAGAAGTGGAAT+TGG | 0.423743 | 1_1:-7460218 | None:intergenic |
| ATGGTGGTGATGCTAGAGTT+GGG | 0.425809 | 1_1:+7460504 | Msa0005020:CDS |
| GGGGATCGCGAGAGGGGAGA+AGG | 0.432937 | 1_1:+7460745 | Msa0005020:CDS |
| AGGAACTGTGCCTATGCTTC+CGG | 0.434210 | 1_1:+7463688 | Msa0005020:CDS |
| AAATTGAGGGTTTGGTGGAA+GGG | 0.439420 | 1_1:+7460432 | Msa0005020:CDS |
| GAGAAATTGTTGAAGGAAGT+TGG | 0.441841 | 1_1:-7460023 | None:intergenic |
| GTTGGTGGTGATTGTTTGAA+AGG | 0.443415 | 1_1:+7460599 | Msa0005020:CDS |
| CGAACCCCATCACTCACAAA+AGG | 0.448596 | 1_1:-7460629 | None:intergenic |
| TCTGCTTGGTTACAGGGAAA+AGG | 0.448658 | 1_1:+7463091 | Msa0005020:intron |
| AATTGAGGGTTTGGTGGAAG+GGG | 0.450119 | 1_1:+7460433 | Msa0005020:CDS |
| GTGAGTGATGGGGTTCGGAA+GGG | 0.455588 | 1_1:+7460635 | Msa0005020:CDS |
| CTGCTTGGTTACAGGGAAAA+GGG | 0.455759 | 1_1:+7463092 | Msa0005020:intron |
| TTTGAGATTTATCGTTTGAT+GGG | 0.457024 | 1_1:+7460386 | Msa0005020:CDS |
| AACCCAGTTGATCAATTGAA+TGG | 0.459406 | 1_1:-7463168 | None:intergenic |
| TTGGTGGTGATTGTTTGAAA+GGG | 0.460482 | 1_1:+7460600 | Msa0005020:CDS |
| GAAGAGTGAAATTGAGGGTT+TGG | 0.461305 | 1_1:+7460424 | Msa0005020:CDS |
| TCATTCATTAATTGTCAAGC+TGG | 0.461966 | 1_1:+7462907 | Msa0005020:CDS |
| GAAATTGAGGGTTTGGTGGA+AGG | 0.462960 | 1_1:+7460431 | Msa0005020:CDS |
| AAGAACTGTGCCTATGCTTC+CGG | 0.464773 | 1_1:+7463622 | Msa0005020:CDS |
| TGTGAGTGATGGGGTTCGGA+AGG | 0.467210 | 1_1:+7460634 | Msa0005020:CDS |
| GCAGCAGTTCAGGTTATGAC+GGG | 0.467718 | 1_1:+7460785 | Msa0005020:CDS |
| TGAGGTTGGTTATTTGGCTG+GGG | 0.467778 | 1_1:+7460673 | Msa0005020:CDS |
| AACTCACTTATAAGATCAAT+AGG | 0.470267 | 1_1:-7463242 | None:intergenic |
| AGAAGTGAAGAGTGAAATTG+AGG | 0.470560 | 1_1:+7460418 | Msa0005020:CDS |
| CTGCTTGTTTCGTGTTGCGA+TGG | 0.470961 | 1_1:+7460320 | Msa0005020:CDS |
| GGAGAAGATTGAGGTGAAAT+CGG | 0.471563 | 1_1:-7460168 | None:intergenic |
| TGCGGTATTCGGTTAGGAAA+CGG | 0.474041 | 1_1:-7460127 | None:intergenic |
| AGCATTGGTTGGTAGTAAAG+TGG | 0.474818 | 1_1:-7460089 | None:intergenic |
| TTCTATACATGGAGGGTTCG+TGG | 0.487374 | 1_1:+7463733 | Msa0005020:CDS |
| ACAACCACTCCCTAAAACCT+AGG | 0.490065 | 1_1:+7459986 | Msa0005020:five_prime_UTR |
| AGCTGCTGAGGAACACGGAT+TGG | 0.491886 | 1_1:+7463544 | Msa0005020:CDS |
| CACCGTTGCGGTATTCGGTT+AGG | 0.495050 | 1_1:-7460133 | None:intergenic |
| GTACTATTCTGTGATGATGA+TGG | 0.496979 | 1_1:+7462879 | Msa0005020:CDS |
| TCATCATCACAGAATAGTAC+AGG | 0.498391 | 1_1:-7462876 | None:intergenic |
| CAGTGGCATCATAATATGAT+TGG | 0.500929 | 1_1:-7462060 | None:intergenic |
| ACCCAGTTGATCAATTGAAT+GGG | 0.505767 | 1_1:-7463167 | None:intergenic |
| TTGATTGATTCTTTGAGCAT+TGG | 0.507350 | 1_1:-7460104 | None:intergenic |
| GTGGACGCCGTAAGTTTGTC+TGG | 0.507922 | 1_1:+7463797 | Msa0005020:CDS |
| AGAAGCTTCTAGAACTTCAC+TGG | 0.511669 | 1_1:+7460274 | Msa0005020:CDS |
| CTTATGTAAATTCCTTCTGT+AGG | 0.514311 | 1_1:+7463135 | Msa0005020:CDS |
| TGGATGGTTGATTGTGACGG+TGG | 0.519274 | 1_1:+7460563 | Msa0005020:CDS |
| GCATTGGTTGGTAGTAAAGT+GGG | 0.519982 | 1_1:-7460088 | None:intergenic |
| GCAACTAGAAAACGCAAAGA+AGG | 0.525322 | 1_1:+7463851 | Msa0005020:CDS |
| GAAGTGAAGAGTGAAATTGA+GGG | 0.532302 | 1_1:+7460419 | Msa0005020:CDS |
| GAGTGAAATTGAGGGTTTGG+TGG | 0.538067 | 1_1:+7460427 | Msa0005020:CDS |
| TGGTGGTGATGCTAGAGTTG+GGG | 0.538164 | 1_1:+7460505 | Msa0005020:CDS |
| GGATTGGCAATATTTGGTTG+TGG | 0.538609 | 1_1:+7463560 | Msa0005020:CDS |
| TCACAATCAACCATCCAAAC+CGG | 0.540267 | 1_1:-7460557 | None:intergenic |
| ATGGTTGATTGTGACGGTGG+TGG | 0.541207 | 1_1:+7460566 | Msa0005020:CDS |
| TAAGCACCAATAAAGCAGTC+AGG | 0.543520 | 1_1:-7461808 | None:intergenic |
| AGCGAAATCTTTCAGGCTGT+CGG | 0.543878 | 1_1:-7462944 | None:intergenic |
| TGAGGCGGGGATCGCGAGAG+GGG | 0.544183 | 1_1:+7460739 | Msa0005020:CDS |
| TTGTATGAAGAGTGAAGTTG+AGG | 0.545439 | 1_1:+7460478 | Msa0005020:CDS |
| GATCAATTGAATGGGAATGC+AGG | 0.547063 | 1_1:-7463159 | None:intergenic |
| TTGTTGATTTGATACCGGTT+TGG | 0.550293 | 1_1:+7460543 | Msa0005020:CDS |
| GAACCCCATCACTCACAAAA+GGG | 0.551030 | 1_1:-7460628 | None:intergenic |
| CCTATTAGTATGAAATTCAA+GGG | 0.552310 | 1_1:-7460246 | None:intergenic |
| ACCTCTCTATAAAGGGGCAG+TGG | 0.553165 | 1_1:-7462077 | None:intergenic |
| GGTGGTGGTGAATCTGGGGT+TGG | 0.555180 | 1_1:+7460581 | Msa0005020:CDS |
| TTTGAGGCGGGGATCGCGAG+AGG | 0.561298 | 1_1:+7460737 | Msa0005020:CDS |
| AACCACAGAAGTGGAATTGG+TGG | 0.561727 | 1_1:-7460215 | None:intergenic |
| GGTGGTGAATCTGGGGTTGG+TGG | 0.563041 | 1_1:+7460584 | Msa0005020:CDS |
| ATCATCACCAGACAAACTTA+CGG | 0.564664 | 1_1:-7463804 | None:intergenic |
| TGCAGCAGTTCAGGTTATGA+CGG | 0.565355 | 1_1:+7460784 | Msa0005020:CDS |
| TGGAACTGAGAAATTGTTGA+AGG | 0.565877 | 1_1:-7460030 | None:intergenic |
| TGATTTGATACCGGTTTGGA+TGG | 0.570864 | 1_1:+7460547 | Msa0005020:CDS |
| CAACCACTCCCTAAAACCTA+GGG | 0.570898 | 1_1:+7459987 | Msa0005020:five_prime_UTR |
| AGAGATGATGAGTAAGTACA+TGG | 0.571721 | 1_1:-7459957 | None:intergenic |
| TGTTCAACCACCGGAAGCAT+AGG | 0.572107 | 1_1:-7463698 | None:intergenic |
| ACCCACCAATTCCACTTCTG+TGG | 0.572448 | 1_1:+7460213 | Msa0005020:CDS |
| TTGATTCTTTGAGCATTGGT+TGG | 0.573059 | 1_1:-7460100 | None:intergenic |
| CTTCTAGCTGCTGAGGAACA+CGG | 0.574329 | 1_1:+7463539 | Msa0005020:CDS |
| AAAACGCAAAGAAGGAATTG+AGG | 0.576892 | 1_1:+7463859 | Msa0005020:CDS |
| ATGGATGTGTCGCGATGAAG+AGG | 0.578592 | 1_1:+7460339 | Msa0005020:CDS |
| AGCGGCATAGACAGAAAGAT+CGG | 0.579831 | 1_1:+7463200 | Msa0005020:CDS |
| GCCACTGCCCCTTTATAGAG+AGG | 0.580203 | 1_1:+7462076 | Msa0005020:CDS |
| TGTTTGACCACCGGAAGCAT+AGG | 0.585831 | 1_1:-7463632 | None:intergenic |
| TGAAGTGGTGTGAATTGCGC+GGG | 0.586090 | 1_1:-7460189 | None:intergenic |
| TCCCATTCAATTGATCAACT+GGG | 0.586710 | 1_1:+7463166 | Msa0005020:CDS |
| GGGGATTGAAATGGGTTGTG+AGG | 0.589661 | 1_1:+7460655 | Msa0005020:CDS |
| ACAGGGAAAAGGGTGATCAT+GGG | 0.591860 | 1_1:+7463102 | Msa0005020:intron |
| GTTTGGATGGTTGATTGTGA+CGG | 0.592189 | 1_1:+7460560 | Msa0005020:CDS |
| TCACTGTTGCTTGAATGTAC+AGG | 0.592735 | 1_1:-7463948 | None:intergenic |
| CATTGGTTGGTAGTAAAGTG+GGG | 0.592808 | 1_1:-7460087 | None:intergenic |
| GCTGAATAGAACCACAGAAG+TGG | 0.594045 | 1_1:-7460224 | None:intergenic |
| TTGAGGCGGGGATCGCGAGA+GGG | 0.594625 | 1_1:+7460738 | Msa0005020:CDS |
| AGTCAGCTATACAGTCTGCT+AGG | 0.596408 | 1_1:+7462989 | Msa0005020:CDS |
| TGGAATTGGTGGGTCTGAAG+TGG | 0.597501 | 1_1:-7460204 | None:intergenic |
| TGAAATTGGTAGCACCGTTG+CGG | 0.601583 | 1_1:-7460145 | None:intergenic |
| AACTGGCAAGCATCGTGCAA+AGG | 0.604651 | 1_1:+7463583 | Msa0005020:CDS |
| ATTGGTTGGTAGTAAAGTGG+GGG | 0.609441 | 1_1:-7460086 | None:intergenic |
| AGAATGGCTTCTAGCTGCTG+AGG | 0.613476 | 1_1:+7463532 | Msa0005020:intron |
| CTGAAGTGGTGTGAATTGCG+CGG | 0.614652 | 1_1:-7460190 | None:intergenic |
| TCAATAGGAGTGGAAACACT+TGG | 0.615988 | 1_1:-7463227 | None:intergenic |
| CTTACCAGCAAGGAGATCAC+TGG | 0.624906 | 1_1:-7461870 | None:intergenic |
| AACTGTGCCTATGCTTCCGG+TGG | 0.625094 | 1_1:+7463625 | Msa0005020:CDS |
| TGACGGTGGTGGTGAATCTG+GGG | 0.625322 | 1_1:+7460577 | Msa0005020:CDS |
| GTACATTCAAGCAACAGTGA+TGG | 0.626221 | 1_1:+7463951 | Msa0005020:CDS |
| AACTGTGCCTATGCTTCCGG+TGG | 0.628824 | 1_1:+7463691 | Msa0005020:CDS |
| CATCATCACAGAATAGTACA+GGG | 0.630428 | 1_1:-7462875 | None:intergenic |
| CAAGTAACCTCTCTATAAAG+GGG | 0.638397 | 1_1:-7462083 | None:intergenic |
| ACTTATAAGATCAATAGGAG+TGG | 0.641994 | 1_1:-7463237 | None:intergenic |
| GGGAATGCAGGACCTACAGA+AGG | 0.642543 | 1_1:-7463147 | None:intergenic |
| CAGCAGTTCAGGTTATGACG+GGG | 0.647188 | 1_1:+7460786 | Msa0005020:CDS |
| AATTGCGCGGGAGAAGATTG+AGG | 0.647307 | 1_1:-7460177 | None:intergenic |
| ACCACAGAAGTGGAATTGGT+GGG | 0.661008 | 1_1:-7460214 | None:intergenic |
| TATGATGGTACTTACCAGCA+AGG | 0.661766 | 1_1:-7461880 | None:intergenic |
| TTCCTAACCGAATACCGCAA+CGG | 0.665195 | 1_1:+7460131 | Msa0005020:CDS |
| AACTGGGTTACTCGTCAAAG+CGG | 0.670412 | 1_1:+7463182 | Msa0005020:CDS |
| CGATAAATCTCAAACACCAA+CGG | 0.671461 | 1_1:-7460377 | None:intergenic |
| TTGGTTGGTAGTAAAGTGGG+GGG | 0.687195 | 1_1:-7460085 | None:intergenic |
| AGTGAAGTTGAGGTTAATGG+TGG | 0.690712 | 1_1:+7460488 | Msa0005020:CDS |
| TGTGTCGCGATGAAGAGGAT+CGG | 0.711856 | 1_1:+7460344 | Msa0005020:CDS |
| TGTAGAGATGCATGATACTG+TGG | 0.718185 | 1_1:+7463778 | Msa0005020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACAAGTTATACAAATAA+AGG | - | chr1_1:7461716-7461735 | None:intergenic | 15.0% |
| !!! | TATAATCTTTTCTGTAAAAT+AGG | - | chr1_1:7462355-7462374 | None:intergenic | 15.0% |
| !!! | TATTTTACAGAAAAGATTAT+AGG | + | chr1_1:7462354-7462373 | Msa0005020:intron | 15.0% |
| !! | AAAATAAACTTATATGAGTA+GGG | - | chr1_1:7462400-7462419 | None:intergenic | 15.0% |
| !! | AAAAATAAACTTATATGAGT+AGG | - | chr1_1:7462401-7462420 | None:intergenic | 15.0% |
| !! | GAAAGAATAATAAAAGAAAA+TGG | - | chr1_1:7463283-7463302 | None:intergenic | 15.0% |
| !!! | TTTCGGAATTTTTACTTTTT+GGG | + | chr1_1:7460809-7460828 | Msa0005020:CDS | 20.0% |
| !! | TATAAAAAACAGAACAAAAC+AGG | - | chr1_1:7462222-7462241 | None:intergenic | 20.0% |
| !! | ATAATGTTTGATAAATGAAC+TGG | - | chr1_1:7462279-7462298 | None:intergenic | 20.0% |
| !!! | TATTTTTCATGCGATAATTT+AGG | + | chr1_1:7462414-7462433 | Msa0005020:intron | 20.0% |
| !!! | AATTGAAATTTTTGTGATGT+TGG | + | chr1_1:7462496-7462515 | Msa0005020:intron | 20.0% |
| !!! | GAAAACTATGATTTAGATTT+TGG | + | chr1_1:7462518-7462537 | Msa0005020:intron | 20.0% |
| !! | AATAATAAAAGAAAATGGAG+GGG | - | chr1_1:7463278-7463297 | None:intergenic | 20.0% |
| !! | GAATAATAAAAGAAAATGGA+GGG | - | chr1_1:7463279-7463298 | None:intergenic | 20.0% |
| !! | AGAATAATAAAAGAAAATGG+AGG | - | chr1_1:7463280-7463299 | None:intergenic | 20.0% |
| !!! | TTTTTTAAAAAAGTTCAGCA+AGG | + | chr1_1:7463335-7463354 | Msa0005020:intron | 20.0% |
| ! | CCTATTAGTATGAAATTCAA+GGG | - | chr1_1:7460249-7460268 | None:intergenic | 25.0% |
| ! | ACCTATTAGTATGAAATTCA+AGG | - | chr1_1:7460250-7460269 | None:intergenic | 25.0% |
| !! | TTTGAGATTTATCGTTTGAT+GGG | + | chr1_1:7460386-7460405 | Msa0005020:CDS | 25.0% |
| !!! | GAAAATGTGTTTGATTTTTG+AGG | + | chr1_1:7460721-7460740 | Msa0005020:CDS | 25.0% |
| !!! | GTTTCGGAATTTTTACTTTT+TGG | + | chr1_1:7460808-7460827 | Msa0005020:CDS | 25.0% |
| !! | ACTACAATTTAAAATCATGC+TGG | - | chr1_1:7460863-7460882 | None:intergenic | 25.0% |
| !!! | AGGTTTTATAAAATGGATTG+CGG | - | chr1_1:7461008-7461027 | None:intergenic | 25.0% |
| !!! | GTCATCAAGGTTTTATAAAA+TGG | - | chr1_1:7461015-7461034 | None:intergenic | 25.0% |
| ! | GATAATAAGCACTTATGTAT+AGG | - | chr1_1:7461289-7461308 | None:intergenic | 25.0% |
| ! | GAGTTTATATGTAAGTTGTT+TGG | - | chr1_1:7461365-7461384 | None:intergenic | 25.0% |
| ! | TCATTGCAACAAAATTGTTA+AGG | - | chr1_1:7461430-7461449 | None:intergenic | 25.0% |
| !! | CATAATTATATTGAGGCATT+TGG | - | chr1_1:7461472-7461491 | None:intergenic | 25.0% |
| ! | TGCCTCAATATAATTATGTT+CGG | + | chr1_1:7461474-7461493 | Msa0005020:intron | 25.0% |
| ! | AATTAAATTTCACCAAGATC+TGG | - | chr1_1:7461550-7461569 | None:intergenic | 25.0% |
| !!! | TTGTGTTTTAATACTCAAGT+TGG | + | chr1_1:7461588-7461607 | Msa0005020:intron | 25.0% |
| ! | AGCATTACTTAGTTGTAATT+CGG | + | chr1_1:7461909-7461928 | Msa0005020:intron | 25.0% |
| ! | TTAGTTGTAATTCGGAATTA+AGG | + | chr1_1:7461917-7461936 | Msa0005020:intron | 25.0% |
| ! | TAGTTGTAATTCGGAATTAA+GGG | + | chr1_1:7461918-7461937 | Msa0005020:intron | 25.0% |
| ! | TAATCTTACACATAGTTTCA+TGG | - | chr1_1:7461978-7461997 | None:intergenic | 25.0% |
| ! | AAACATTATCTTAGATTAGC+TGG | + | chr1_1:7462290-7462309 | Msa0005020:intron | 25.0% |
| !! | TCTTTTCTGTAAAATAGGTT+TGG | - | chr1_1:7462350-7462369 | None:intergenic | 25.0% |
| ! | TTGATTCTGTTTATTGATGT+TGG | + | chr1_1:7462457-7462476 | Msa0005020:intron | 25.0% |
| !! | CTTTTCAAAGACAATATACT+GGG | - | chr1_1:7462610-7462629 | None:intergenic | 25.0% |
| !! | CAGTATATTGTCTTTGAAAA+GGG | + | chr1_1:7462609-7462628 | Msa0005020:intron | 25.0% |
| ! | TGTCATATTCAACAATTTAC+TGG | + | chr1_1:7462807-7462826 | Msa0005020:intron | 25.0% |
| ! | AACTCACTTATAAGATCAAT+AGG | - | chr1_1:7463245-7463264 | None:intergenic | 25.0% |
| ! | CACTGATATAACTTGAAATT+GGG | - | chr1_1:7463383-7463402 | None:intergenic | 25.0% |
| ! | ACACTGATATAACTTGAAAT+TGG | - | chr1_1:7463384-7463403 | None:intergenic | 25.0% |
| ! | AAAAAAATCTGACAGACAAA+AGG | - | chr1_1:7463464-7463483 | None:intergenic | 25.0% |
| ! | TAGTGATTTCTTATTCAGAA+TGG | + | chr1_1:7463516-7463535 | Msa0005020:intron | 25.0% |
| ! | CCATGTATAGAACTTAAAAA+GGG | - | chr1_1:7463659-7463678 | None:intergenic | 25.0% |
| ! | TCCATGTATAGAACTTAAAA+AGG | - | chr1_1:7463660-7463679 | None:intergenic | 25.0% |
| !!! | TTTTTAAGTTCTATACATGG+AGG | + | chr1_1:7463659-7463678 | Msa0005020:CDS | 25.0% |
| !!! | TTTTAAGTTCTATACATGGA+GGG | + | chr1_1:7463660-7463679 | Msa0005020:CDS | 25.0% |
| ! | CCATGTATAGAAGTTAAAAA+GGG | - | chr1_1:7463725-7463744 | None:intergenic | 25.0% |
| ! | TCCATGTATAGAAGTTAAAA+AGG | - | chr1_1:7463726-7463745 | None:intergenic | 25.0% |
| !!! | TTTTTAACTTCTATACATGG+AGG | + | chr1_1:7463725-7463744 | Msa0005020:CDS | 25.0% |
| !!! | TTTTAACTTCTATACATGGA+GGG | + | chr1_1:7463726-7463745 | Msa0005020:CDS | 25.0% |
| TTTCTCAGTTCCAAACAAAA+TGG | + | chr1_1:7460040-7460059 | Msa0005020:exon | 30.0% | |
| ! | TTTTGTGTGTCCATTTTGTT+TGG | - | chr1_1:7460053-7460072 | None:intergenic | 30.0% |
| ! | TTGATTGATTCTTTGAGCAT+TGG | - | chr1_1:7460107-7460126 | None:intergenic | 30.0% |
| CCCTTGAATTTCATACTAAT+AGG | + | chr1_1:7460246-7460265 | Msa0005020:CDS | 30.0% | |
| ! | GTTTGAGATTTATCGTTTGA+TGG | + | chr1_1:7460385-7460404 | Msa0005020:CDS | 30.0% |
| !!! | ATTTATCGTTTGATGGGTTT+TGG | + | chr1_1:7460392-7460411 | Msa0005020:CDS | 30.0% |
| !!! | TTTATCGTTTGATGGGTTTT+GGG | + | chr1_1:7460393-7460412 | Msa0005020:CDS | 30.0% |
| !! | AATGTGTTTGATTTTTGAGG+CGG | + | chr1_1:7460724-7460743 | Msa0005020:CDS | 30.0% |
| AGTCTAAATAGTTGTCATCA+AGG | - | chr1_1:7461028-7461047 | None:intergenic | 30.0% | |
| GAAAATTAAGCTGTTAACGT+AGG | + | chr1_1:7461334-7461353 | Msa0005020:intron | 30.0% | |
| AAAGAATGCATGACAACAAA+TGG | - | chr1_1:7461391-7461410 | None:intergenic | 30.0% | |
| GACCGAACATAATTATATTG+AGG | - | chr1_1:7461479-7461498 | None:intergenic | 30.0% | |
| ATTATGTTCGGTCATTATGT+TGG | + | chr1_1:7461486-7461505 | Msa0005020:intron | 30.0% | |
| ! | TGTAGATTCTACAGCATTTT+AGG | + | chr1_1:7461521-7461540 | Msa0005020:intron | 30.0% |
| TATATTACTCAGTTTGACGT+AGG | + | chr1_1:7461732-7461751 | Msa0005020:intron | 30.0% | |
| AGTAATGCTAAAGCATATGA+TGG | - | chr1_1:7461898-7461917 | None:intergenic | 30.0% | |
| TCAAGTAACCTCTCTATAAA+GGG | - | chr1_1:7462087-7462106 | None:intergenic | 30.0% | |
| GAACAAAACAGGACTAAATA+AGG | - | chr1_1:7462211-7462230 | None:intergenic | 30.0% | |
| ! | ATAAGATCCGACAGTATTTT+TGG | + | chr1_1:7462315-7462334 | Msa0005020:intron | 30.0% |
| TTCATGCGATAATTTAGGTA+AGG | + | chr1_1:7462419-7462438 | Msa0005020:intron | 30.0% | |
| CAGAATCAATATTTCAACTC+TGG | - | chr1_1:7462446-7462465 | None:intergenic | 30.0% | |
| ! | CCTTTTCAAAGACAATATAC+TGG | - | chr1_1:7462611-7462630 | None:intergenic | 30.0% |
| ! | CCAGTATATTGTCTTTGAAA+AGG | + | chr1_1:7462608-7462627 | Msa0005020:intron | 30.0% |
| TGACATAATCTTCTCAACAT+TGG | + | chr1_1:7462664-7462683 | Msa0005020:intron | 30.0% | |
| ! | AATTCGAGTTCTTTGGTTTA+TGG | + | chr1_1:7462718-7462737 | Msa0005020:intron | 30.0% |
| ! | TGCATCATACTTTTCTTGAA+GGG | - | chr1_1:7462761-7462780 | None:intergenic | 30.0% |
| ! | ATGCATCATACTTTTCTTGA+AGG | - | chr1_1:7462762-7462781 | None:intergenic | 30.0% |
| TCATTCATTAATTGTCAAGC+TGG | + | chr1_1:7462907-7462926 | Msa0005020:CDS | 30.0% | |
| !! | AATTGATAGCGAAATCTTTC+AGG | - | chr1_1:7462954-7462973 | None:intergenic | 30.0% |
| TGAAAGATTTCGCTATCAAT+TGG | + | chr1_1:7462953-7462972 | Msa0005020:CDS | 30.0% | |
| TCATATTTCACAGCTACAAT+AGG | - | chr1_1:7463026-7463045 | None:intergenic | 30.0% | |
| GTAGCTGTGAAATATGAATT+AGG | + | chr1_1:7463029-7463048 | Msa0005020:intron | 30.0% | |
| GTGAAATATGAATTAGGAAG+TGG | + | chr1_1:7463035-7463054 | Msa0005020:intron | 30.0% | |
| AATAAGTCTGATAATCTGCT+TGG | + | chr1_1:7463077-7463096 | Msa0005020:intron | 30.0% | |
| CTTATGTAAATTCCTTCTGT+AGG | + | chr1_1:7463135-7463154 | Msa0005020:CDS | 30.0% | |
| ACTTATAAGATCAATAGGAG+TGG | - | chr1_1:7463240-7463259 | None:intergenic | 30.0% | |
| !!! | CCCTTTTTAAGTTCTATACA+TGG | + | chr1_1:7463656-7463675 | Msa0005020:CDS | 30.0% |
| !!! | CCCTTTTTAACTTCTATACA+TGG | + | chr1_1:7463722-7463741 | Msa0005020:CDS | 30.0% |
| AGAGATGATGAGTAAGTACA+TGG | - | chr1_1:7459960-7459979 | None:intergenic | 35.0% | |
| ! | GAGAAAAACCCTAGGTTTTA+GGG | - | chr1_1:7459998-7460017 | None:intergenic | 35.0% |
| ! | AGAGAAAAACCCTAGGTTTT+AGG | - | chr1_1:7459999-7460018 | None:intergenic | 35.0% |
| GAGAAATTGTTGAAGGAAGT+TGG | - | chr1_1:7460026-7460045 | None:intergenic | 35.0% | |
| TGGAACTGAGAAATTGTTGA+AGG | - | chr1_1:7460033-7460052 | None:intergenic | 35.0% | |
| !! | TTGATTCTTTGAGCATTGGT+TGG | - | chr1_1:7460103-7460122 | None:intergenic | 35.0% |
| CGATAAATCTCAAACACCAA+CGG | - | chr1_1:7460380-7460399 | None:intergenic | 35.0% | |
| !!! | TTATCGTTTGATGGGTTTTG+GGG | + | chr1_1:7460394-7460413 | Msa0005020:CDS | 35.0% |
| AGAAGTGAAGAGTGAAATTG+AGG | + | chr1_1:7460418-7460437 | Msa0005020:CDS | 35.0% | |
| GAAGTGAAGAGTGAAATTGA+GGG | + | chr1_1:7460419-7460438 | Msa0005020:CDS | 35.0% | |
| TTGTATGAAGAGTGAAGTTG+AGG | + | chr1_1:7460478-7460497 | Msa0005020:CDS | 35.0% | |
| AAGAGTGAAGTTGAGGTTAA+TGG | + | chr1_1:7460485-7460504 | Msa0005020:CDS | 35.0% | |
| !!! | GGGTTTTGTTGATTTGATAC+CGG | + | chr1_1:7460538-7460557 | Msa0005020:CDS | 35.0% |
| !! | TTGTTGATTTGATACCGGTT+TGG | + | chr1_1:7460543-7460562 | Msa0005020:CDS | 35.0% |
| !! | TTGGTGGTGATTGTTTGAAA+GGG | + | chr1_1:7460600-7460619 | Msa0005020:CDS | 35.0% |
| ! | TTTTTCCCTTTTGTGAGTGA+TGG | + | chr1_1:7460623-7460642 | Msa0005020:CDS | 35.0% |
| ! | TTTTCCCTTTTGTGAGTGAT+GGG | + | chr1_1:7460624-7460643 | Msa0005020:CDS | 35.0% |
| !!! | ATGTGTTTGATTTTTGAGGC+GGG | + | chr1_1:7460725-7460744 | Msa0005020:CDS | 35.0% |
| AGCTAATGTAATCTCAACTG+CGG | + | chr1_1:7460921-7460940 | Msa0005020:intron | 35.0% | |
| CTTGTACACTTAGTAATTGC+TGG | - | chr1_1:7461056-7461075 | None:intergenic | 35.0% | |
| GCAATTACTAAGTGTACAAG+CGG | + | chr1_1:7461056-7461075 | Msa0005020:intron | 35.0% | |
| CAATTACTAAGTGTACAAGC+GGG | + | chr1_1:7461057-7461076 | Msa0005020:intron | 35.0% | |
| CAGCTTATGAAAATAGACTG+TGG | + | chr1_1:7461214-7461233 | Msa0005020:intron | 35.0% | |
| ! | GCTTATCAGATATGCTTTTG+AGG | + | chr1_1:7461826-7461845 | Msa0005020:CDS | 35.0% |
| !! | TATGCTTTTGAGGATGATGT+TGG | + | chr1_1:7461836-7461855 | Msa0005020:CDS | 35.0% |
| CACATAGTTTCATGGAGAAA+AGG | - | chr1_1:7461970-7461989 | None:intergenic | 35.0% | |
| CAGTGGCATCATAATATGAT+TGG | - | chr1_1:7462063-7462082 | None:intergenic | 35.0% | |
| CAAGTAACCTCTCTATAAAG+GGG | - | chr1_1:7462086-7462105 | None:intergenic | 35.0% | |
| CTCAAGTAACCTCTCTATAA+AGG | - | chr1_1:7462088-7462107 | None:intergenic | 35.0% | |
| TAAGGAAAAGTGGTAAGTGT+GGG | - | chr1_1:7462193-7462212 | None:intergenic | 35.0% | |
| ATAAGGAAAAGTGGTAAGTG+TGG | - | chr1_1:7462194-7462213 | None:intergenic | 35.0% | |
| CAGGACTAAATAAGGAAAAG+TGG | - | chr1_1:7462203-7462222 | None:intergenic | 35.0% | |
| !!! | ATCCGACAGTATTTTTGGTT+CGG | + | chr1_1:7462320-7462339 | Msa0005020:intron | 35.0% |
| GAAAAGATTATAGGTCACTC+AGG | + | chr1_1:7462363-7462382 | Msa0005020:intron | 35.0% | |
| GGTGAACTAAACAATTTCTC+TGG | - | chr1_1:7462569-7462588 | None:intergenic | 35.0% | |
| GGGAACTATACTTGAAGAAT+CGG | - | chr1_1:7462590-7462609 | None:intergenic | 35.0% | |
| CAAAGAACTCGAATTACCAA+CGG | - | chr1_1:7462713-7462732 | None:intergenic | 35.0% | |
| !! | TTTACTGGTCGTTTTGCTAT+AGG | + | chr1_1:7462822-7462841 | Msa0005020:intron | 35.0% |
| !! | TTACTGGTCGTTTTGCTATA+GGG | + | chr1_1:7462823-7462842 | Msa0005020:intron | 35.0% |
| CATCATCACAGAATAGTACA+GGG | - | chr1_1:7462878-7462897 | None:intergenic | 35.0% | |
| TCATCATCACAGAATAGTAC+AGG | - | chr1_1:7462879-7462898 | None:intergenic | 35.0% | |
| ! | GTACTATTCTGTGATGATGA+TGG | + | chr1_1:7462879-7462898 | Msa0005020:CDS | 35.0% |
| ATGAATTAGGAAGTGGTTTC+TGG | + | chr1_1:7463042-7463061 | Msa0005020:intron | 35.0% | |
| TGATAATCTGCTTGGTTACA+GGG | + | chr1_1:7463085-7463104 | Msa0005020:intron | 35.0% | |
| TTCCCATTCAATTGATCAAC+TGG | + | chr1_1:7463165-7463184 | Msa0005020:CDS | 35.0% | |
| TCCCATTCAATTGATCAACT+GGG | + | chr1_1:7463166-7463185 | Msa0005020:CDS | 35.0% | |
| ACCCAGTTGATCAATTGAAT+GGG | - | chr1_1:7463170-7463189 | None:intergenic | 35.0% | |
| AACCCAGTTGATCAATTGAA+TGG | - | chr1_1:7463171-7463190 | None:intergenic | 35.0% | |
| AAAGAAAATGGAGGGGTAAT+TGG | - | chr1_1:7463271-7463290 | None:intergenic | 35.0% | |
| ACTTCTCTTTGACTGTTAAG+AGG | + | chr1_1:7463304-7463323 | Msa0005020:intron | 35.0% | |
| GCAAGGTGTATAATTGAATG+TGG | + | chr1_1:7463352-7463371 | Msa0005020:intron | 35.0% | |
| TCAAGTTATATCAGTGTCGT+TGG | + | chr1_1:7463387-7463406 | Msa0005020:intron | 35.0% | |
| ATCATCACCAGACAAACTTA+CGG | - | chr1_1:7463807-7463826 | None:intergenic | 35.0% | |
| AAAACGCAAAGAAGGAATTG+AGG | + | chr1_1:7463859-7463878 | Msa0005020:CDS | 35.0% | |
| !! | TTTTAGGGAGTGGTTGTAAG+TGG | - | chr1_1:7459983-7460002 | None:intergenic | 40.0% |
| !! | ATTGGTTGGTAGTAAAGTGG+GGG | - | chr1_1:7460089-7460108 | None:intergenic | 40.0% |
| !! | CATTGGTTGGTAGTAAAGTG+GGG | - | chr1_1:7460090-7460109 | None:intergenic | 40.0% |
| !! | GCATTGGTTGGTAGTAAAGT+GGG | - | chr1_1:7460091-7460110 | None:intergenic | 40.0% |
| !! | AGCATTGGTTGGTAGTAAAG+TGG | - | chr1_1:7460092-7460111 | None:intergenic | 40.0% |
| TGAGGTGAAATCGGTGAAAT+TGG | - | chr1_1:7460162-7460181 | None:intergenic | 40.0% | |
| GGAGAAGATTGAGGTGAAAT+CGG | - | chr1_1:7460171-7460190 | None:intergenic | 40.0% | |
| TAGAACCACAGAAGTGGAAT+TGG | - | chr1_1:7460221-7460240 | None:intergenic | 40.0% | |
| !! | AGAAGCTTCTAGAACTTCAC+TGG | + | chr1_1:7460274-7460293 | Msa0005020:CDS | 40.0% |
| !! | TTCTAGAACTTCACTGGTTG+CGG | + | chr1_1:7460280-7460299 | Msa0005020:CDS | 40.0% |
| GAAGAGTGAAATTGAGGGTT+TGG | + | chr1_1:7460424-7460443 | Msa0005020:CDS | 40.0% | |
| !! | AAATTGAGGGTTTGGTGGAA+GGG | + | chr1_1:7460432-7460451 | Msa0005020:CDS | 40.0% |
| AGTGAAGTTGAGGTTAATGG+TGG | + | chr1_1:7460488-7460507 | Msa0005020:CDS | 40.0% | |
| !! | TGATTTGATACCGGTTTGGA+TGG | + | chr1_1:7460547-7460566 | Msa0005020:CDS | 40.0% |
| TCACAATCAACCATCCAAAC+CGG | - | chr1_1:7460560-7460579 | None:intergenic | 40.0% | |
| GTTTGGATGGTTGATTGTGA+CGG | + | chr1_1:7460560-7460579 | Msa0005020:CDS | 40.0% | |
| !! | GTTGGTGGTGATTGTTTGAA+AGG | + | chr1_1:7460599-7460618 | Msa0005020:CDS | 40.0% |
| ! | TTTCCCTTTTGTGAGTGATG+GGG | + | chr1_1:7460625-7460644 | Msa0005020:CDS | 40.0% |
| !! | ATTGAAATGGGTTGTGAGGT+TGG | + | chr1_1:7460659-7460678 | Msa0005020:CDS | 40.0% |
| !!! | TGTGTTTGATTTTTGAGGCG+GGG | + | chr1_1:7460726-7460745 | Msa0005020:CDS | 40.0% |
| ! | TGGGGTATTTAGGATCTGTT+TGG | + | chr1_1:7461080-7461099 | Msa0005020:intron | 40.0% |
| TAAGCACTTGTCAGACTGTT+TGG | + | chr1_1:7461120-7461139 | Msa0005020:intron | 40.0% | |
| AAGCACTTGTCAGACTGTTT+GGG | + | chr1_1:7461121-7461140 | Msa0005020:intron | 40.0% | |
| TCGGTCATTATGTTGGAGTT+TGG | + | chr1_1:7461493-7461512 | Msa0005020:intron | 40.0% | |
| !! | CATTTTAGGAAGCCAGATCT+TGG | + | chr1_1:7461535-7461554 | Msa0005020:intron | 40.0% |
| AGTTGTCTCCTGTCTTTGTA+TGG | + | chr1_1:7461643-7461662 | Msa0005020:intron | 40.0% | |
| GTTGTCTCCTGTCTTTGTAT+GGG | + | chr1_1:7461644-7461663 | Msa0005020:intron | 40.0% | |
| AGATTGACCCATACAAAGAC+AGG | - | chr1_1:7461654-7461673 | None:intergenic | 40.0% | |
| GATATGTCCTTGTGCTTTCT+GGG | + | chr1_1:7461754-7461773 | Msa0005020:intron | 40.0% | |
| ATATGTCCTTGTGCTTTCTG+GGG | + | chr1_1:7461755-7461774 | Msa0005020:intron | 40.0% | |
| TGACTTCCTGACTGCTTTAT+TGG | + | chr1_1:7461802-7461821 | Msa0005020:CDS | 40.0% | |
| TAAGCACCAATAAAGCAGTC+AGG | - | chr1_1:7461811-7461830 | None:intergenic | 40.0% | |
| TATGATGGTACTTACCAGCA+AGG | - | chr1_1:7461883-7461902 | None:intergenic | 40.0% | |
| AGTTTCATGGAGAAAAGGAG+AGG | - | chr1_1:7461965-7461984 | None:intergenic | 40.0% | |
| TCAGTTAAACCTATGCCAAG+TGG | - | chr1_1:7462032-7462051 | None:intergenic | 40.0% | |
| GTGTGGGATCCTATCTAAAA+GGG | - | chr1_1:7462177-7462196 | None:intergenic | 40.0% | |
| AGTGTGGGATCCTATCTAAA+AGG | - | chr1_1:7462178-7462197 | None:intergenic | 40.0% | |
| !! | CATGAGTTTAGTTCTGTGCT+TGG | - | chr1_1:7462249-7462268 | None:intergenic | 40.0% |
| TGCCGAACCAAAAATACTGT+CGG | - | chr1_1:7462325-7462344 | None:intergenic | 40.0% | |
| ! | CTTTGAAAAGGGCTACTACT+TGG | + | chr1_1:7462620-7462639 | Msa0005020:intron | 40.0% |
| ! | TCAACATTGGCTACAATGCT+GGG | + | chr1_1:7462677-7462696 | Msa0005020:intron | 40.0% |
| !! | CGTTGGTAATTCGAGTTCTT+TGG | + | chr1_1:7462711-7462730 | Msa0005020:intron | 40.0% |
| CTGATAATCTGCTTGGTTAC+AGG | + | chr1_1:7463084-7463103 | Msa0005020:intron | 40.0% | |
| GATCAATTGAATGGGAATGC+AGG | - | chr1_1:7463162-7463181 | None:intergenic | 40.0% | |
| TCAATAGGAGTGGAAACACT+TGG | - | chr1_1:7463230-7463249 | None:intergenic | 40.0% | |
| !! | ATATCAGTGTCGTTGGTGAT+TGG | + | chr1_1:7463394-7463413 | Msa0005020:intron | 40.0% |
| TGGTGATTGGATTCTGACTA+TGG | + | chr1_1:7463407-7463426 | Msa0005020:intron | 40.0% | |
| GGAAAGAGACTACGCATAAT+TGG | - | chr1_1:7463443-7463462 | None:intergenic | 40.0% | |
| !! | GAACACGGATTGGCAATATT+TGG | + | chr1_1:7463554-7463573 | Msa0005020:CDS | 40.0% |
| ! | GGATTGGCAATATTTGGTTG+TGG | + | chr1_1:7463560-7463579 | Msa0005020:CDS | 40.0% |
| GCAATATTTGGTTGTGGAAC+TGG | + | chr1_1:7463566-7463585 | Msa0005020:CDS | 40.0% | |
| AAAAAGGGATGTTTGACCAC+CGG | - | chr1_1:7463644-7463663 | None:intergenic | 40.0% | |
| ! | TCTATACATGGAGGGTTTTC+AGG | + | chr1_1:7463668-7463687 | Msa0005020:CDS | 40.0% |
| AAAAAGGGATGTTCAACCAC+CGG | - | chr1_1:7463710-7463729 | None:intergenic | 40.0% | |
| TGTAGAGATGCATGATACTG+TGG | + | chr1_1:7463778-7463797 | Msa0005020:CDS | 40.0% | |
| GCAACTAGAAAACGCAAAGA+AGG | + | chr1_1:7463851-7463870 | Msa0005020:CDS | 40.0% | |
| ! | TCACTGTTGCTTGAATGTAC+AGG | - | chr1_1:7463951-7463970 | None:intergenic | 40.0% |
| ACAACCACTCCCTAAAACCT+AGG | + | chr1_1:7459986-7460005 | Msa0005020:five_prime_UTR | 45.0% | |
| CAACCACTCCCTAAAACCTA+GGG | + | chr1_1:7459987-7460006 | Msa0005020:five_prime_UTR | 45.0% | |
| !!! | AAACCCTAGGTTTTAGGGAG+TGG | - | chr1_1:7459993-7460012 | None:intergenic | 45.0% |
| TGGTGAGAGAGAAAAACCCT+AGG | - | chr1_1:7460006-7460025 | None:intergenic | 45.0% | |
| !!! | AAAGTGGGGGGTGTTTTGAA+GGG | - | chr1_1:7460076-7460095 | None:intergenic | 45.0% |
| !!! | TAAAGTGGGGGGTGTTTTGA+AGG | - | chr1_1:7460077-7460096 | None:intergenic | 45.0% |
| !! | TTGGTTGGTAGTAAAGTGGG+GGG | - | chr1_1:7460088-7460107 | None:intergenic | 45.0% |
| TGCGGTATTCGGTTAGGAAA+CGG | - | chr1_1:7460130-7460149 | None:intergenic | 45.0% | |
| TTCCTAACCGAATACCGCAA+CGG | + | chr1_1:7460131-7460150 | Msa0005020:CDS | 45.0% | |
| ! | TGAAATTGGTAGCACCGTTG+CGG | - | chr1_1:7460148-7460167 | None:intergenic | 45.0% |
| ACCACAGAAGTGGAATTGGT+GGG | - | chr1_1:7460217-7460236 | None:intergenic | 45.0% | |
| AACCACAGAAGTGGAATTGG+TGG | - | chr1_1:7460218-7460237 | None:intergenic | 45.0% | |
| GCTGAATAGAACCACAGAAG+TGG | - | chr1_1:7460227-7460246 | None:intergenic | 45.0% | |
| ! | AACTTCACTGGTTGCGGTTA+AGG | + | chr1_1:7460286-7460305 | Msa0005020:CDS | 45.0% |
| ! | ACTTCACTGGTTGCGGTTAA+GGG | + | chr1_1:7460287-7460306 | Msa0005020:CDS | 45.0% |
| GAGTGAAATTGAGGGTTTGG+TGG | + | chr1_1:7460427-7460446 | Msa0005020:CDS | 45.0% | |
| !! | GAAATTGAGGGTTTGGTGGA+AGG | + | chr1_1:7460431-7460450 | Msa0005020:CDS | 45.0% |
| !! | AATTGAGGGTTTGGTGGAAG+GGG | + | chr1_1:7460433-7460452 | Msa0005020:CDS | 45.0% |
| ! | AATGGTGGTGATGCTAGAGT+TGG | + | chr1_1:7460503-7460522 | Msa0005020:CDS | 45.0% |
| ! | ATGGTGGTGATGCTAGAGTT+GGG | + | chr1_1:7460504-7460523 | Msa0005020:CDS | 45.0% |
| ! | TGATGCTAGAGTTGGGGTTT+TGG | + | chr1_1:7460511-7460530 | Msa0005020:CDS | 45.0% |
| !!! | TAGAGTTGGGGTTTTGGAAG+AGG | + | chr1_1:7460517-7460536 | Msa0005020:CDS | 45.0% |
| !!! | AGAGTTGGGGTTTTGGAAGA+GGG | + | chr1_1:7460518-7460537 | Msa0005020:CDS | 45.0% |
| GAACCCCATCACTCACAAAA+GGG | - | chr1_1:7460631-7460650 | None:intergenic | 45.0% | |
| !! | CTTTTGTGAGTGATGGGGTT+CGG | + | chr1_1:7460630-7460649 | Msa0005020:CDS | 45.0% |
| GTTCGGAAGGGGATTGAAAT+GGG | + | chr1_1:7460647-7460666 | Msa0005020:CDS | 45.0% | |
| ! | GGGTTGTGAGGTTGGTTATT+TGG | + | chr1_1:7460667-7460686 | Msa0005020:CDS | 45.0% |
| ! | TGTGAGGTTGGTTATTTGGC+TGG | + | chr1_1:7460671-7460690 | Msa0005020:CDS | 45.0% |
| ! | GTGAGGTTGGTTATTTGGCT+GGG | + | chr1_1:7460672-7460691 | Msa0005020:CDS | 45.0% |
| ! | TGAGGTTGGTTATTTGGCTG+GGG | + | chr1_1:7460673-7460692 | Msa0005020:CDS | 45.0% |
| ! | TGCAGCAGTTCAGGTTATGA+CGG | + | chr1_1:7460784-7460803 | Msa0005020:CDS | 45.0% |
| ! | TTCAGGTTATGACGGGGTTT+CGG | + | chr1_1:7460792-7460811 | Msa0005020:CDS | 45.0% |
| ! | ATGGATTGCGGCTGCAATTT+AGG | - | chr1_1:7460996-7461015 | None:intergenic | 45.0% |
| TTACTAAGTGTACAAGCGGG+TGG | + | chr1_1:7461060-7461079 | Msa0005020:intron | 45.0% | |
| TACTAAGTGTACAAGCGGGT+GGG | + | chr1_1:7461061-7461080 | Msa0005020:intron | 45.0% | |
| GGATATGTCCTTGTGCTTTC+TGG | + | chr1_1:7461753-7461772 | Msa0005020:intron | 45.0% | |
| ! | AAATCACCCCAGAAAGCACA+AGG | - | chr1_1:7461764-7461783 | None:intergenic | 45.0% |
| GTGGAACAGGAGAACAAAAC+AGG | - | chr1_1:7462155-7462174 | None:intergenic | 45.0% | |
| CCTATCTAAAAGGGTGGAAC+AGG | - | chr1_1:7462168-7462187 | None:intergenic | 45.0% | |
| ! | CCTGTTCCACCCTTTTAGAT+AGG | + | chr1_1:7462165-7462184 | Msa0005020:intron | 45.0% |
| TGGGATCCTATCTAAAAGGG+TGG | - | chr1_1:7462174-7462193 | None:intergenic | 45.0% | |
| ! | CTCAACATTGGCTACAATGC+TGG | + | chr1_1:7462676-7462695 | Msa0005020:intron | 45.0% |
| CTCGAATTACCAACGGAAGA+AGG | - | chr1_1:7462706-7462725 | None:intergenic | 45.0% | |
| AGCGAAATCTTTCAGGCTGT+CGG | - | chr1_1:7462947-7462966 | None:intergenic | 45.0% | |
| AGTCAGCTATACAGTCTGCT+AGG | + | chr1_1:7462989-7463008 | Msa0005020:CDS | 45.0% | |
| TCTGCTTGGTTACAGGGAAA+AGG | + | chr1_1:7463091-7463110 | Msa0005020:intron | 45.0% | |
| CTGCTTGGTTACAGGGAAAA+GGG | + | chr1_1:7463092-7463111 | Msa0005020:intron | 45.0% | |
| TACAGGGAAAAGGGTGATCA+TGG | + | chr1_1:7463101-7463120 | Msa0005020:intron | 45.0% | |
| ACAGGGAAAAGGGTGATCAT+GGG | + | chr1_1:7463102-7463121 | Msa0005020:intron | 45.0% | |
| AACTGGGTTACTCGTCAAAG+CGG | + | chr1_1:7463182-7463201 | Msa0005020:CDS | 45.0% | |
| AGCGGCATAGACAGAAAGAT+CGG | + | chr1_1:7463200-7463219 | Msa0005020:CDS | 45.0% | |
| GAAAATGGAGGGGTAATTGG+TGG | - | chr1_1:7463268-7463287 | None:intergenic | 45.0% | |
| AAGAACTGTGCCTATGCTTC+CGG | + | chr1_1:7463622-7463641 | Msa0005020:CDS | 45.0% | |
| TTCTATACATGGAGGGTTCG+TGG | + | chr1_1:7463733-7463752 | Msa0005020:CDS | 45.0% | |
| !!! | GCGTTTTCTAGTTGCATCAG+TGG | - | chr1_1:7463846-7463865 | None:intergenic | 45.0% |
| AATTGCGCGGGAGAAGATTG+AGG | - | chr1_1:7460180-7460199 | None:intergenic | 50.0% | |
| TGAAGTGGTGTGAATTGCGC+GGG | - | chr1_1:7460192-7460211 | None:intergenic | 50.0% | |
| CTGAAGTGGTGTGAATTGCG+CGG | - | chr1_1:7460193-7460212 | None:intergenic | 50.0% | |
| ! | TGGAATTGGTGGGTCTGAAG+TGG | - | chr1_1:7460207-7460226 | None:intergenic | 50.0% |
| ACCCACCAATTCCACTTCTG+TGG | + | chr1_1:7460213-7460232 | Msa0005020:CDS | 50.0% | |
| CTGCTTGTTTCGTGTTGCGA+TGG | + | chr1_1:7460320-7460339 | Msa0005020:CDS | 50.0% | |
| ATGGATGTGTCGCGATGAAG+AGG | + | chr1_1:7460339-7460358 | Msa0005020:CDS | 50.0% | |
| TGTGTCGCGATGAAGAGGAT+CGG | + | chr1_1:7460344-7460363 | Msa0005020:CDS | 50.0% | |
| ! | TGGTGGTGATGCTAGAGTTG+GGG | + | chr1_1:7460505-7460524 | Msa0005020:CDS | 50.0% |
| TGGATGGTTGATTGTGACGG+TGG | + | chr1_1:7460563-7460582 | Msa0005020:CDS | 50.0% | |
| ATGGTTGATTGTGACGGTGG+TGG | + | chr1_1:7460566-7460585 | Msa0005020:CDS | 50.0% | |
| CGAACCCCATCACTCACAAA+AGG | - | chr1_1:7460632-7460651 | None:intergenic | 50.0% | |
| GGTTCGGAAGGGGATTGAAA+TGG | + | chr1_1:7460646-7460665 | Msa0005020:CDS | 50.0% | |
| !! | GGGGATTGAAATGGGTTGTG+AGG | + | chr1_1:7460655-7460674 | Msa0005020:CDS | 50.0% |
| ! | GCAGCAGTTCAGGTTATGAC+GGG | + | chr1_1:7460785-7460804 | Msa0005020:CDS | 50.0% |
| ! | CAGCAGTTCAGGTTATGACG+GGG | + | chr1_1:7460786-7460805 | Msa0005020:CDS | 50.0% |
| ACTAAGTGTACAAGCGGGTG+GGG | + | chr1_1:7461062-7461081 | Msa0005020:intron | 50.0% | |
| ! | TACAAGCGGGTGGGGTATTT+AGG | + | chr1_1:7461070-7461089 | Msa0005020:intron | 50.0% |
| AGGAGACAACTCTACGTGGA+TGG | - | chr1_1:7461634-7461653 | None:intergenic | 50.0% | |
| AGACAGGAGACAACTCTACG+TGG | - | chr1_1:7461638-7461657 | None:intergenic | 50.0% | |
| AAGGAGATCACTGGCAAAGC+TGG | - | chr1_1:7461864-7461883 | None:intergenic | 50.0% | |
| TTTGCCAGTGATCTCCTTGC+TGG | + | chr1_1:7461866-7461885 | Msa0005020:CDS | 50.0% | |
| CTTACCAGCAAGGAGATCAC+TGG | - | chr1_1:7461873-7461892 | None:intergenic | 50.0% | |
| AGCCATCTTACTCGTCCACT+TGG | + | chr1_1:7462014-7462033 | Msa0005020:intron | 50.0% | |
| TGCCAAGTGGACGAGTAAGA+TGG | - | chr1_1:7462019-7462038 | None:intergenic | 50.0% | |
| CTTACTCGTCCACTTGGCAT+AGG | + | chr1_1:7462020-7462039 | Msa0005020:intron | 50.0% | |
| ACCTCTCTATAAAGGGGCAG+TGG | - | chr1_1:7462080-7462099 | None:intergenic | 50.0% | |
| TAGGTCACTCAGGAGAGATG+AGG | + | chr1_1:7462373-7462392 | Msa0005020:intron | 50.0% | |
| AGGTCACTCAGGAGAGATGA+GGG | + | chr1_1:7462374-7462393 | Msa0005020:intron | 50.0% | |
| ! | AGAATGGCTTCTAGCTGCTG+AGG | + | chr1_1:7463532-7463551 | Msa0005020:intron | 50.0% |
| ! | CTTCTAGCTGCTGAGGAACA+CGG | + | chr1_1:7463539-7463558 | Msa0005020:CDS | 50.0% |
| ! | AACTGGCAAGCATCGTGCAA+AGG | + | chr1_1:7463583-7463602 | Msa0005020:CDS | 50.0% |
| ! | TGTTTGACCACCGGAAGCAT+AGG | - | chr1_1:7463635-7463654 | None:intergenic | 50.0% |
| AGGAACTGTGCCTATGCTTC+CGG | + | chr1_1:7463688-7463707 | Msa0005020:CDS | 50.0% | |
| ! | TGTTCAACCACCGGAAGCAT+AGG | - | chr1_1:7463701-7463720 | None:intergenic | 50.0% |
| CACCGTTGCGGTATTCGGTT+AGG | - | chr1_1:7460136-7460155 | None:intergenic | 55.0% | |
| GGTAGCACCGTTGCGGTATT+CGG | - | chr1_1:7460141-7460160 | None:intergenic | 55.0% | |
| !!! | GATCGGTGTTTTAGCGCCGT+TGG | + | chr1_1:7460361-7460380 | Msa0005020:CDS | 55.0% |
| ! | TGTGACGGTGGTGGTGAATC+TGG | + | chr1_1:7460575-7460594 | Msa0005020:CDS | 55.0% |
| ! | GTGACGGTGGTGGTGAATCT+GGG | + | chr1_1:7460576-7460595 | Msa0005020:CDS | 55.0% |
| ! | TGACGGTGGTGGTGAATCTG+GGG | + | chr1_1:7460577-7460596 | Msa0005020:CDS | 55.0% |
| ! | TGTGAGTGATGGGGTTCGGA+AGG | + | chr1_1:7460634-7460653 | Msa0005020:CDS | 55.0% |
| ! | GTGAGTGATGGGGTTCGGAA+GGG | + | chr1_1:7460635-7460654 | Msa0005020:CDS | 55.0% |
| ! | TGAGTGATGGGGTTCGGAAG+GGG | + | chr1_1:7460636-7460655 | Msa0005020:CDS | 55.0% |
| GTTGCATGCTGCAGCAGTTC+AGG | + | chr1_1:7460775-7460794 | Msa0005020:CDS | 55.0% | |
| GCCACTGCCCCTTTATAGAG+AGG | + | chr1_1:7462076-7462095 | Msa0005020:CDS | 55.0% | |
| GGGAATGCAGGACCTACAGA+AGG | - | chr1_1:7463150-7463169 | None:intergenic | 55.0% | |
| AGCTGCTGAGGAACACGGAT+TGG | + | chr1_1:7463544-7463563 | Msa0005020:CDS | 55.0% | |
| AACTGTGCCTATGCTTCCGG+TGG | + | chr1_1:7463625-7463644 | Msa0005020:CDS | 55.0% | |
| AACTGTGCCTATGCTTCCGG+TGG | + | chr1_1:7463625-7463644 | Msa0005020:CDS | 55.0% | |
| GTGGACGCCGTAAGTTTGTC+TGG | + | chr1_1:7463797-7463816 | Msa0005020:CDS | 55.0% | |
| ! | GGTGGTGGTGAATCTGGGGT+TGG | + | chr1_1:7460581-7460600 | Msa0005020:CDS | 60.0% |
| ! | GGTGGTGAATCTGGGGTTGG+TGG | + | chr1_1:7460584-7460603 | Msa0005020:CDS | 60.0% |
| ! | TTTGAGGCGGGGATCGCGAG+AGG | + | chr1_1:7460737-7460756 | Msa0005020:CDS | 65.0% |
| TTGAGGCGGGGATCGCGAGA+GGG | + | chr1_1:7460738-7460757 | Msa0005020:CDS | 65.0% | |
| GCTGGGCAGCCTTCTTCCGT+TGG | + | chr1_1:7462694-7462713 | Msa0005020:intron | 65.0% | |
| TGAGGCGGGGATCGCGAGAG+GGG | + | chr1_1:7460739-7460758 | Msa0005020:CDS | 70.0% | |
| GGGGATCGCGAGAGGGGAGA+AGG | + | chr1_1:7460745-7460764 | Msa0005020:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 7459950 | 7463970 | 7459950 | ID=Msa0005020;Name=Msa0005020 |
| chr1_1 | mRNA | 7459950 | 7463970 | 7459950 | ID=Msa0005020-mRNA-1;Parent=Msa0005020;Name=Msa0005020-mRNA-1;_AED=0.17;_eAED=0.19;_QI=109|0.4|0.5|1|1|1|6|0|559 |
| chr1_1 | exon | 7459950 | 7460830 | 7459950 | ID=Msa0005020-mRNA-1:exon:2602;Parent=Msa0005020-mRNA-1 |
| chr1_1 | exon | 7461792 | 7461887 | 7461792 | ID=Msa0005020-mRNA-1:exon:2603;Parent=Msa0005020-mRNA-1 |
| chr1_1 | exon | 7462042 | 7462097 | 7462042 | ID=Msa0005020-mRNA-1:exon:2604;Parent=Msa0005020-mRNA-1 |
| chr1_1 | exon | 7462844 | 7463010 | 7462844 | ID=Msa0005020-mRNA-1:exon:2605;Parent=Msa0005020-mRNA-1 |
| chr1_1 | exon | 7463106 | 7463257 | 7463106 | ID=Msa0005020-mRNA-1:exon:2606;Parent=Msa0005020-mRNA-1 |
| chr1_1 | exon | 7463534 | 7463970 | 7463534 | ID=Msa0005020-mRNA-1:exon:2607;Parent=Msa0005020-mRNA-1 |
| chr1_1 | five_prime_UTR | 7459950 | 7460058 | 7459950 | ID=Msa0005020-mRNA-1:five_prime_utr;Parent=Msa0005020-mRNA-1 |
| chr1_1 | CDS | 7460059 | 7460830 | 7460059 | ID=Msa0005020-mRNA-1:cds;Parent=Msa0005020-mRNA-1 |
| chr1_1 | CDS | 7461792 | 7461887 | 7461792 | ID=Msa0005020-mRNA-1:cds;Parent=Msa0005020-mRNA-1 |
| chr1_1 | CDS | 7462042 | 7462097 | 7462042 | ID=Msa0005020-mRNA-1:cds;Parent=Msa0005020-mRNA-1 |
| chr1_1 | CDS | 7462844 | 7463010 | 7462844 | ID=Msa0005020-mRNA-1:cds;Parent=Msa0005020-mRNA-1 |
| chr1_1 | CDS | 7463106 | 7463257 | 7463106 | ID=Msa0005020-mRNA-1:cds;Parent=Msa0005020-mRNA-1 |
| chr1_1 | CDS | 7463534 | 7463970 | 7463534 | ID=Msa0005020-mRNA-1:cds;Parent=Msa0005020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
