AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1329140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329140 MtrunA17_Chr4g0056541 95.935 369 9 2 1 368 1 364 0.0 740
Msa1329140 MtrunA17_Chr4g0018391 65.549 328 85 10 1 312 1 316 1.46e-145 416
Msa1329140 MtrunA17_Chr5g0398971 60.471 382 104 16 1 368 1 349 2.22e-144 412
Msa1329140 MtrunA17_Chr5g0405211 55.128 312 108 8 5 307 6 294 1.26e-105 314
Msa1329140 MtrunA17_Chr8g0372121 52.229 314 106 4 5 316 4 275 1.90e-103 307
Msa1329140 MtrunA17_Chr1g0200561 75.641 156 38 0 1 156 13 168 1.26e-87 268
Msa1329140 MtrunA17_Chr8g0346001 48.204 334 144 8 1 307 9 340 5.82e-87 269
Msa1329140 MtrunA17_Chr2g0309331 46.061 330 142 6 7 324 10 315 6.36e-84 258
Msa1329140 MtrunA17_Chr4g0017921 75.497 151 36 1 7 157 8 157 4.60e-81 251
Msa1329140 MtrunA17_Chr2g0309891 54.217 166 72 2 7 169 6 170 2.29e-62 203
Msa1329140 MtrunA17_Chr3g0091921 60.127 158 54 3 7 159 16 169 1.65e-61 199
Msa1329140 MtrunA17_Chr6g0484441 53.801 171 73 2 6 173 4 171 4.98e-61 199
Msa1329140 MtrunA17_Chr4g0060931 60.000 155 53 3 7 156 17 167 2.30e-59 196
Msa1329140 MtrunA17_Chr6g0481091 53.289 152 68 2 7 156 6 156 1.23e-58 190
Msa1329140 MtrunA17_Chr2g0316971 57.143 161 60 3 5 159 21 178 2.55e-58 194
Msa1329140 MtrunA17_Chr3g0109821 51.829 164 73 3 7 166 6 167 7.41e-57 196
Msa1329140 MtrunA17_Chr1g0147421 56.863 153 60 3 7 156 27 176 2.17e-56 188
Msa1329140 MtrunA17_Chr5g0433781 50.867 173 76 3 7 171 6 177 4.17e-56 194
Msa1329140 MtrunA17_Chr3g0139331 54.605 152 64 2 7 156 11 159 4.31e-56 187
Msa1329140 MtrunA17_Chr6g0453451 55.844 154 61 3 7 156 20 170 1.46e-55 184
Msa1329140 MtrunA17_Chr4g0042561 50.292 171 74 3 5 167 7 174 2.41e-55 182
Msa1329140 MtrunA17_Chr2g0312321 54.321 162 66 3 5 163 9 165 2.58e-55 183
Msa1329140 MtrunA17_Chr7g0217721 53.409 176 55 4 10 165 22 190 3.89e-55 184
Msa1329140 MtrunA17_Chr7g0253011 55.758 165 61 4 7 163 17 177 5.15e-55 185
Msa1329140 MtrunA17_Chr5g0417791 49.689 161 72 2 6 160 2 159 5.74e-54 179
Msa1329140 MtrunA17_Chr1g0183741 52.229 157 68 3 5 159 8 159 6.41e-54 179
Msa1329140 MtrunA17_Chr7g0252971 47.904 167 69 3 5 156 6 169 1.27e-53 180
Msa1329140 MtrunA17_Chr7g0261411 53.289 152 64 3 5 154 8 154 2.03e-53 178
Msa1329140 MtrunA17_Chr8g0361731 47.619 168 72 3 9 163 16 180 9.42e-53 179
Msa1329140 MtrunA17_Chr7g0214071 49.693 163 74 2 6 166 14 170 6.49e-52 173
Msa1329140 MtrunA17_Chr5g0400461 50.314 159 70 3 5 156 4 160 7.72e-52 175
Msa1329140 MtrunA17_Chr5g0417001 47.337 169 74 3 7 163 14 179 9.73e-52 177
Msa1329140 MtrunA17_Chr6g0453131 46.328 177 78 4 1 163 9 182 1.18e-51 176
Msa1329140 MtrunA17_Chr6g0461661 47.904 167 78 3 7 167 18 181 1.27e-51 176
Msa1329140 MtrunA17_Chr3g0124761 49.390 164 74 3 1 159 1 160 2.15e-51 173
Msa1329140 MtrunA17_Chr8g0384721 47.674 172 79 4 1 166 1 167 4.80e-51 172
Msa1329140 MtrunA17_Chr4g0054791 51.592 157 70 3 5 156 4 159 6.99e-51 172
Msa1329140 MtrunA17_Chr3g0130731 48.780 164 74 4 7 165 7 165 7.83e-51 171
Msa1329140 MtrunA17_Chr2g0318081 51.316 152 69 2 7 156 16 164 1.54e-50 172
Msa1329140 MtrunA17_Chr7g0217711 60.448 134 46 2 10 143 22 148 1.90e-50 167
Msa1329140 MtrunA17_Chr3g0128111 51.007 149 70 2 10 156 45 192 2.02e-50 169
Msa1329140 MtrunA17_Chr2g0318101 43.814 194 86 6 6 183 14 200 2.66e-50 172
Msa1329140 MtrunA17_Chr5g0428991 50.955 157 74 2 3 157 21 176 1.08e-49 176
Msa1329140 MtrunA17_Chr7g0263931 49.057 159 70 3 6 156 10 165 1.86e-49 169
Msa1329140 MtrunA17_Chr4g0047841 42.784 194 77 4 6 168 14 204 3.09e-49 169
Msa1329140 MtrunA17_Chr8g0359921 45.882 170 85 2 7 172 14 180 3.17e-49 168
Msa1329140 MtrunA17_Chr3g0144271 58.955 134 49 3 7 137 23 153 4.34e-49 171
Msa1329140 MtrunA17_Chr3g0130101 50.993 151 69 3 9 156 9 157 1.08e-48 167
Msa1329140 MtrunA17_Chr3g0128151 35.740 277 149 7 3 270 18 274 2.32e-48 172
Msa1329140 MtrunA17_Chr2g0311651 45.455 176 76 4 7 164 21 194 2.96e-48 165
Msa1329140 MtrunA17_Chr1g0197351 53.205 156 64 3 9 156 44 198 3.67e-48 169
Msa1329140 MtrunA17_Chr8g0364791 46.629 178 86 5 9 180 8 182 4.34e-48 168
Msa1329140 MtrunA17_Chr2g0311661 44.199 181 81 4 7 169 20 198 7.16e-48 164
Msa1329140 MtrunA17_Chr4g0076731 48.344 151 74 2 7 156 54 201 2.55e-47 166
Msa1329140 MtrunA17_Chr2g0326361 44.186 172 84 4 8 171 15 182 3.15e-46 160
Msa1329140 MtrunA17_Chr3g0092671 47.239 163 79 4 9 167 7 166 6.68e-46 164
Msa1329140 MtrunA17_Chr8g0384201 43.750 192 100 5 9 195 8 196 7.73e-46 163
Msa1329140 MtrunA17_Chr1g0201021 46.067 178 85 6 9 179 21 194 1.26e-45 164
Msa1329140 MtrunA17_Chr5g0442771 45.732 164 72 4 7 156 18 178 1.67e-45 158
Msa1329140 MtrunA17_Chr1g0197361 46.584 161 83 3 9 167 10 169 2.20e-45 164
Msa1329140 MtrunA17_Chr4g0038751 49.007 151 68 3 9 156 17 161 1.72e-44 155
Msa1329140 MtrunA17_Chr8g0385991 46.471 170 77 6 2 162 9 173 7.30e-43 149
Msa1329140 MtrunA17_Chr3g0131911 41.618 173 84 3 2 162 9 176 7.23e-40 141
Msa1329140 MtrunA17_Chr3g0113001 52.632 114 40 3 52 157 10 117 8.45e-36 132
Msa1329140 MtrunA17_Chr8g0345671 44.937 158 76 6 2 153 3 155 2.88e-35 133
Msa1329140 MtrunA17_Chr8g0345691 43.871 155 79 5 3 154 8 157 1.10e-34 132
Msa1329140 MtrunA17_Chr4g0026141 45.113 133 64 4 8 134 6 135 1.11e-33 125
Msa1329140 MtrunA17_Chr2g0321631 41.509 159 78 7 8 154 5 160 5.59e-32 120
Msa1329140 MtrunA17_Chr4g0050701 40.000 160 75 4 7 156 11 159 1.41e-31 118
Msa1329140 MtrunA17_Chr3g0113031 55.914 93 31 2 73 157 3 93 4.14e-30 116
Msa1329140 MtrunA17_Chr2g0321741 40.580 138 70 3 21 153 1 131 4.15e-30 118
Msa1329140 MtrunA17_Chr7g0266701 36.420 162 92 4 6 156 3 164 1.66e-29 114
Msa1329140 MtrunA17_Chr8g0345711 43.077 130 69 4 7 133 12 139 7.14e-28 107
Msa1329140 MtrunA17_Chr8g0345701 41.333 150 67 6 1 133 1 146 1.66e-26 103
Msa1329140 MtrunA17_Chr8g0345731 36.129 155 88 5 7 156 24 172 1.19e-23 96.3
Msa1329140 MtrunA17_Chr7g0243371 46.154 91 46 2 51 138 4 94 1.08e-21 89.4
Msa1329140 MtrunA17_Chr8g0345721 36.905 168 69 7 10 142 38 203 1.43e-21 91.7
Msa1329140 MtrunA17_Chr8g0345741 41.176 119 65 4 18 133 2 118 3.27e-20 86.3
Msa1329140 MtrunA17_Chr8g0384351 33.133 166 86 7 7 172 10 150 1.16e-17 80.1
Msa1329140 MtrunA17_Chr3g0130321 31.765 170 91 6 1 155 1 160 5.66e-15 73.2
Msa1329140 MtrunA17_Chr7g0251651 28.750 160 105 6 7 163 18 171 3.61e-14 70.5
Msa1329140 MtrunA17_Chr2g0282871 28.655 171 98 7 1 154 47 210 3.28e-12 66.6
Msa1329140 MtrunA17_Chr7g0274971 28.947 152 99 6 13 158 11 159 5.48e-12 64.7
Msa1329140 MtrunA17_Chr4g0040541 28.902 173 96 7 1 154 42 206 5.00e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329140 AT1G12260.1 55.097 412 124 10 1 368 1 395 2.03e-145 417
Msa1329140 AT1G12260.2 56.032 373 128 10 1 368 1 342 5.84e-137 394
Msa1329140 AT1G62700.1 52.580 407 139 13 1 366 1 394 4.07e-129 376
Msa1329140 AT1G62700.2 52.580 407 139 13 1 366 1 394 4.07e-129 376
Msa1329140 AT4G36160.2 49.051 369 139 9 7 348 14 360 4.27e-108 322
Msa1329140 AT4G36160.1 49.051 369 139 9 7 348 10 356 9.16e-108 321
Msa1329140 AT4G36160.3 49.051 369 139 9 7 348 10 356 9.16e-108 321
Msa1329140 AT2G18060.3 52.484 322 121 7 7 314 9 312 8.54e-107 318
Msa1329140 AT2G18060.1 52.484 322 121 7 7 314 9 312 8.54e-107 318
Msa1329140 AT5G62380.2 46.761 355 151 6 1 342 1 330 1.44e-101 304
Msa1329140 AT5G62380.1 46.761 355 151 6 1 342 1 330 1.44e-101 304
Msa1329140 AT5G66300.1 50.804 311 104 6 7 304 12 286 7.23e-100 298
Msa1329140 AT2G46770.1 50.000 320 104 9 1 304 10 289 1.65e-90 276
Msa1329140 AT1G71930.2 44.025 318 128 5 5 311 7 285 1.91e-84 259
Msa1329140 AT1G71930.1 44.025 318 128 5 5 311 7 285 1.91e-84 259
Msa1329140 AT3G61910.1 46.082 319 108 7 1 304 5 274 2.66e-84 259
Msa1329140 AT1G32770.1 56.538 260 74 9 1 234 10 256 2.72e-84 260
Msa1329140 AT1G33280.1 72.185 151 41 1 7 157 8 157 3.79e-78 243
Msa1329140 AT4G10350.1 71.242 153 42 1 7 157 9 161 1.07e-77 243
Msa1329140 AT1G79580.3 73.377 154 35 3 7 157 17 167 1.54e-77 243
Msa1329140 AT1G79580.5 73.377 154 35 3 7 157 17 167 1.54e-77 243
Msa1329140 AT1G79580.4 73.377 154 35 3 7 157 17 167 1.54e-77 243
Msa1329140 AT1G79580.2 73.377 154 35 3 7 157 17 167 1.54e-77 243
Msa1329140 AT1G79580.1 73.377 154 35 3 7 157 17 167 1.54e-77 243
Msa1329140 AT3G18400.1 62.092 153 52 3 6 156 4 152 2.24e-63 205
Msa1329140 AT3G17730.1 55.263 152 65 2 7 156 6 156 1.96e-59 192
Msa1329140 AT2G24430.2 57.325 157 61 3 7 160 16 169 3.26e-59 194
Msa1329140 AT2G24430.1 57.325 157 61 3 7 160 16 169 3.26e-59 194
Msa1329140 AT5G61430.1 58.710 155 55 3 7 156 16 166 7.09e-59 194
Msa1329140 AT3G10490.1 46.193 197 97 4 5 195 25 218 3.54e-58 189
Msa1329140 AT1G69490.1 54.717 159 63 2 5 157 7 162 3.72e-58 190
Msa1329140 AT5G39610.1 58.974 156 55 3 7 157 20 171 3.94e-58 191
Msa1329140 AT5G07680.2 57.143 154 59 2 7 156 3 153 1.40e-57 190
Msa1329140 AT5G07680.1 57.143 154 59 2 7 156 17 167 2.46e-57 190
Msa1329140 AT5G17260.1 49.398 166 80 2 7 169 6 170 3.03e-57 194
Msa1329140 AT1G65910.1 55.195 154 62 3 7 156 6 156 3.46e-57 197
Msa1329140 AT3G10480.1 47.208 197 95 4 5 195 25 218 7.39e-57 192
Msa1329140 AT3G10490.2 47.150 193 93 4 9 195 29 218 9.47e-57 192
Msa1329140 AT1G54330.1 57.237 152 63 2 7 158 6 155 1.38e-56 187
Msa1329140 AT3G03200.1 53.595 153 67 2 7 156 6 157 2.63e-56 191
Msa1329140 AT1G76420.1 56.863 153 60 3 7 156 22 171 5.96e-56 186
Msa1329140 AT3G04070.2 44.928 207 83 5 5 186 8 208 8.41e-56 186
Msa1329140 AT3G10480.2 47.716 197 93 5 5 195 25 217 8.53e-56 189
Msa1329140 AT3G29035.1 57.692 156 57 3 7 157 24 175 1.84e-55 184
Msa1329140 AT5G18270.1 53.939 165 66 4 7 164 21 182 3.22e-55 184
Msa1329140 AT3G04060.1 45.413 218 97 8 7 208 20 231 4.41e-55 184
Msa1329140 AT5G53950.1 56.688 157 59 3 6 156 16 169 4.62e-55 185
Msa1329140 AT5G18270.2 53.939 165 66 4 7 164 21 182 5.21e-55 184
Msa1329140 AT3G12977.1 55.769 156 61 4 5 156 16 167 6.29e-55 182
Msa1329140 AT5G46590.1 54.487 156 66 3 5 156 4 158 1.47e-54 181
Msa1329140 AT3G15170.1 53.293 167 69 3 5 165 18 181 2.72e-54 181
Msa1329140 AT1G56010.2 52.147 163 69 3 5 161 17 176 1.00e-53 180
Msa1329140 AT5G04410.1 45.989 187 94 4 2 183 4 188 1.19e-52 183
Msa1329140 AT2G43000.1 39.286 252 121 6 9 255 20 244 3.38e-52 175
Msa1329140 AT5G63790.1 47.399 173 80 3 6 171 49 217 3.39e-52 176
Msa1329140 AT5G63790.2 47.399 173 80 3 6 171 59 227 4.28e-52 176
Msa1329140 AT4G27410.2 52.632 152 67 2 7 156 14 162 5.53e-52 175
Msa1329140 AT5G46590.2 59.091 132 52 2 5 135 4 134 1.03e-51 174
Msa1329140 AT3G04070.1 41.704 223 83 6 5 186 8 224 1.12e-51 176
Msa1329140 AT2G33480.2 51.316 152 68 1 6 157 14 159 1.51e-51 173
Msa1329140 AT1G33060.1 51.634 153 69 3 7 156 24 174 1.95e-51 181
Msa1329140 AT1G33060.2 51.634 153 69 3 7 156 24 174 1.99e-51 181
Msa1329140 AT3G10480.3 41.739 230 92 6 5 195 25 251 2.98e-51 179
Msa1329140 AT4G35580.1 51.282 156 73 2 3 156 5 159 3.30e-51 178
Msa1329140 AT2G33480.1 51.299 154 67 3 6 157 14 161 3.48e-51 172
Msa1329140 AT1G01720.1 46.746 169 80 3 1 163 1 165 3.66e-51 172
Msa1329140 AT4G35580.2 51.572 159 68 3 3 156 5 159 3.88e-51 179
Msa1329140 AT4G35580.3 51.572 159 68 3 3 156 5 159 3.97e-51 179
Msa1329140 AT5G08790.1 47.191 178 82 4 1 171 1 173 4.91e-51 172
Msa1329140 AT3G10500.1 43.979 191 99 4 2 186 4 192 7.09e-51 178
Msa1329140 AT5G39820.1 47.429 175 64 4 7 156 20 191 7.26e-51 173
Msa1329140 AT1G61110.1 47.904 167 67 4 6 156 15 177 1.43e-50 172
Msa1329140 AT3G15500.1 49.686 159 74 3 7 163 14 168 1.89e-50 171
Msa1329140 AT4G17980.1 50.633 158 71 3 5 156 4 160 3.84e-50 169
Msa1329140 AT1G77450.1 45.833 168 82 3 8 170 11 174 4.55e-50 169
Msa1329140 AT1G52890.1 46.746 169 83 3 7 173 14 177 9.31e-50 170
Msa1329140 AT4G27410.3 48.795 166 69 3 7 156 14 179 9.78e-50 169
Msa1329140 AT4G17980.2 50.633 158 71 3 5 156 4 160 1.02e-49 169
Msa1329140 AT1G32510.1 46.154 169 80 3 5 163 4 171 1.42e-49 168
Msa1329140 AT4G10350.2 71.296 108 29 1 52 157 7 114 1.89e-49 168
Msa1329140 AT4G28530.1 49.708 171 61 5 5 156 8 172 4.24e-49 169
Msa1329140 AT1G26870.1 45.833 168 75 3 9 163 18 182 8.09e-49 170
Msa1329140 AT2G18060.2 42.437 238 105 7 88 311 2 221 7.07e-48 164
Msa1329140 AT5G24590.2 49.367 158 76 4 3 157 9 165 6.06e-47 166
Msa1329140 AT5G13180.1 46.541 159 76 3 2 157 9 161 9.48e-47 160
Msa1329140 AT2G02450.2 47.020 151 76 2 7 156 51 198 2.87e-46 163
Msa1329140 AT2G02450.1 47.020 151 76 2 7 156 51 198 2.93e-46 162
Msa1329140 AT3G15510.1 45.402 174 75 4 11 168 21 190 7.20e-46 161
Msa1329140 AT1G34180.3 45.333 150 79 2 9 156 18 166 1.05e-44 160
Msa1329140 AT5G22290.1 45.098 153 78 2 5 157 19 165 1.09e-44 157
Msa1329140 AT2G27300.1 43.636 165 83 3 5 166 12 169 1.51e-44 157
Msa1329140 AT5G09330.5 41.667 192 102 6 5 189 4 192 1.73e-44 160
Msa1329140 AT5G09330.2 41.667 192 102 6 5 189 4 192 1.73e-44 160
Msa1329140 AT5G09330.4 41.667 192 102 6 5 189 4 192 1.73e-44 160
Msa1329140 AT5G09330.3 41.667 192 102 6 5 189 4 192 1.73e-44 160
Msa1329140 AT5G09330.1 41.667 192 102 6 5 189 4 192 1.73e-44 160
Msa1329140 AT1G34180.1 32.432 296 170 10 9 279 18 308 4.36e-44 160
Msa1329140 AT1G52880.1 47.619 168 69 4 11 163 21 184 4.41e-44 155
Msa1329140 AT3G49530.2 45.223 157 82 4 3 156 9 164 4.71e-44 157
Msa1329140 AT1G34190.1 43.750 176 88 6 9 177 18 189 6.88e-44 159
Msa1329140 AT5G64060.1 45.161 155 80 3 5 156 4 156 1.83e-43 154
Msa1329140 AT3G49530.1 45.223 157 82 4 3 156 9 164 1.97e-43 157
Msa1329140 AT2G17040.1 44.371 151 75 3 9 156 8 152 2.28e-43 152
Msa1329140 AT5G04395.1 47.682 151 66 3 5 142 26 176 1.77e-42 147
Msa1329140 AT1G34180.4 43.293 164 74 4 9 156 18 178 7.56e-42 152
Msa1329140 AT1G34180.2 31.935 310 165 12 9 279 18 320 2.02e-41 153
Msa1329140 AT3G12910.1 43.023 172 73 5 9 160 23 189 2.44e-41 147
Msa1329140 AT3G44290.2 41.139 158 83 4 9 163 16 166 1.16e-40 143
Msa1329140 AT3G44290.1 41.139 158 83 4 9 163 16 166 1.50e-39 143
Msa1329140 AT5G61430.2 59.813 107 34 3 55 156 1 103 2.85e-38 138
Msa1329140 AT3G12977.2 56.481 108 41 2 52 156 10 114 7.82e-37 133
Msa1329140 AT1G56010.1 58.824 102 37 1 65 161 8 109 1.14e-36 134
Msa1329140 AT1G32870.2 41.818 165 89 3 7 167 10 171 2.62e-35 135
Msa1329140 AT1G32870.1 41.818 165 89 3 7 167 10 171 3.24e-35 135
Msa1329140 AT1G32870.3 41.818 165 89 3 7 167 46 207 6.68e-35 135
Msa1329140 AT2G33480.3 51.961 102 47 2 58 157 3 104 2.65e-32 120
Msa1329140 AT5G22380.1 40.769 130 69 4 10 133 8 135 5.82e-27 107
Msa1329140 AT3G44350.2 33.714 175 100 8 10 175 8 175 9.88e-26 104
Msa1329140 AT3G44350.1 38.931 131 71 5 10 134 8 135 1.59e-25 101
Msa1329140 AT3G10490.4 42.857 119 60 3 83 195 2 118 2.45e-25 105
Msa1329140 AT3G10490.3 42.857 119 60 3 83 195 2 118 2.45e-25 105
Msa1329140 AT1G02230.1 45.802 131 62 6 8 133 4 130 3.06e-25 105
Msa1329140 AT4G01550.1 38.158 152 84 5 10 156 7 153 4.76e-25 106
Msa1329140 AT4G01520.1 35.762 151 88 5 8 153 5 151 4.92e-25 103
Msa1329140 AT3G04420.2 42.188 128 71 3 8 133 4 130 2.25e-24 101
Msa1329140 AT4G01540.4 36.242 149 86 5 10 153 7 151 4.26e-24 102
Msa1329140 AT1G02250.1 45.038 131 63 5 8 133 4 130 5.59e-24 102
Msa1329140 AT3G04420.1 42.188 128 71 3 8 133 4 130 6.22e-24 101
Msa1329140 AT4G01540.3 36.242 149 86 5 10 153 7 151 7.09e-24 102
Msa1329140 AT4G01540.2 36.242 149 86 5 10 153 7 151 1.16e-23 101
Msa1329140 AT5G64530.1 36.905 168 73 6 7 156 3 155 1.18e-23 97.1
Msa1329140 AT4G01540.1 36.242 149 86 5 10 153 7 151 1.36e-23 102
Msa1329140 AT5G64530.2 42.748 131 58 5 7 135 3 118 2.52e-23 95.5
Msa1329140 AT2G43000.2 33.333 189 97 5 72 255 2 166 6.70e-23 95.5
Msa1329140 AT4G28530.2 28.216 241 79 7 5 193 8 206 1.58e-21 94.4
Msa1329140 AT1G02220.1 40.310 129 71 4 7 133 3 127 1.60e-19 89.7
Msa1329140 AT3G56530.1 30.872 149 99 2 8 154 53 199 5.41e-19 87.0
Msa1329140 AT1G01010.1 31.053 190 104 9 10 187 6 180 8.59e-19 87.8
Msa1329140 AT5G50820.1 34.965 143 68 6 6 139 16 142 6.05e-18 81.6
Msa1329140 AT5G22290.2 44.928 69 34 1 89 157 2 66 3.66e-16 77.8
Msa1329140 AT3G55210.1 28.090 178 108 7 2 165 5 176 2.09e-14 73.2
Msa1329140 AT5G14000.1 27.273 165 112 3 1 163 9 167 1.92e-13 68.9
Msa1329140 AT5G14000.2 29.197 137 90 2 1 135 9 140 2.14e-13 67.8
Msa1329140 AT3G04430.1 34.328 134 71 6 13 133 6 135 3.53e-11 62.4
Msa1329140 AT1G28470.1 29.697 165 92 6 7 154 77 234 4.79e-11 63.5

Find 115 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATCTTCACTCACTTTA+TGG 0.109284 8_4:+47437582 Msa1329140:CDS
GCATATTAATATATAGTATT+TGG 0.147682 8_4:+47437909 Msa1329140:three_prime_UTR
AAGAGAAAAGATGATTTATT+AGG 0.185077 8_4:+47431920 Msa1329140:five_prime_UTR
AATATACTCAAAACAATTTC+TGG 0.230974 8_4:+47434173 Msa1329140:CDS
GGTGAGAATTGGTTCGGGTT+GGG 0.250402 8_4:-47437329 None:intergenic
CAAACAGAATTATGCAAAAT+AGG 0.259681 8_4:+47434030 Msa1329140:intron
CCTTTATCTATTGTTAAGTT+TGG 0.271628 8_4:-47431880 None:intergenic
TATATATGTAGGAACATTTC+CGG 0.273565 8_4:-47438099 None:intergenic
CAATCAGATTTCTGTCCATT+TGG 0.277247 8_4:-47434237 None:intergenic
TAAGTTTGGAGCTAGATTTC+AGG 0.284365 8_4:-47431866 None:intergenic
GCATGAGCATGATGATTATA+AGG 0.293277 8_4:-47437489 None:intergenic
GAGCAACAAAAGCAGGATTC+TGG 0.295790 8_4:+47434127 Msa1329140:CDS
TATTGCATTAATTCTAGTTC+TGG 0.299193 8_4:-47437384 None:intergenic
AATCAGATTTCTGTCCATTT+GGG 0.310097 8_4:-47434236 None:intergenic
GTGAGAATTGGTTCGGGTTG+GGG 0.323739 8_4:-47437328 None:intergenic
CGTCTTGAAACTAATCAAAA+TGG 0.327333 8_4:+47434276 Msa1329140:CDS
AGAGAAAAGATGATTTATTA+GGG 0.328786 8_4:+47431921 Msa1329140:five_prime_UTR
TATTAAAATTAAAATACATT+TGG 0.358715 8_4:-47438054 None:intergenic
ATGAACAGCTTACAGCATTA+AGG 0.362569 8_4:-47437993 None:intergenic
TAGGAGGGTGAGAATTGGTT+CGG 0.394916 8_4:-47437335 None:intergenic
ATATATGAACCTCTGGAGTC+TGG 0.395962 8_4:+47438016 Msa1329140:three_prime_UTR
ATGATCAATCACCATGTAAC+TGG 0.399685 8_4:+47437268 Msa1329140:CDS
CCAAACTTAACAATAGATAA+AGG 0.415115 8_4:+47431880 Msa1329140:five_prime_UTR
CATGAGCATGATGATTATAA+GGG 0.417661 8_4:-47437488 None:intergenic
ACTCAAAACAATTTCTGGTT+GGG 0.418569 8_4:+47434178 Msa1329140:CDS
CCAGAGTTCCATGTGGCAAC+TGG 0.420939 8_4:-47437847 None:intergenic
GGCAATCGATGATCAGTTGC+CGG 0.421864 8_4:+47438080 Msa1329140:three_prime_UTR
AGGAGGGTGAGAATTGGTTC+GGG 0.425538 8_4:-47437334 None:intergenic
GAGTGGTATGAAGTATAGTT+AGG 0.433410 8_4:-47437354 None:intergenic
GAAAACTAGCATCATGGTAT+TGG 0.436544 8_4:-47437419 None:intergenic
GGCTTTCAAGGTGTGGAAGT+TGG 0.437985 8_4:-47437443 None:intergenic
CGGGTTGGGGATTCAAGATC+TGG 0.439654 8_4:-47437315 None:intergenic
ATTTATTGTTATATATATGT+AGG 0.441656 8_4:-47438110 None:intergenic
GAAAAGCTTATCTCATGAAA+TGG 0.442191 8_4:-47431844 None:intergenic
CTATTCGTTCTAGTTCCTGT+TGG 0.449896 8_4:-47434105 None:intergenic
AAGTTAAATTGTTGTATCCT+CGG 0.452739 8_4:-47432109 None:intergenic
AAGAAGGATGGGTTGTATGC+AGG 0.452985 8_4:+47437202 Msa1329140:CDS
CTAGTTCTGGTTTGCATGAG+TGG 0.455930 8_4:-47437371 None:intergenic
TACTCAAAACAATTTCTGGT+TGG 0.456891 8_4:+47434177 Msa1329140:CDS
ATGAAATGGTGGCGCTAAAA+CGG 0.457017 8_4:-47431830 None:intergenic
ATAGTTAGGAGGGTGAGAAT+TGG 0.460967 8_4:-47437340 None:intergenic
ATCCACACTTGAATTCTACT+TGG 0.461676 8_4:+47432330 Msa1329140:five_prime_UTR
TGCATCCACACTTAATATCA+AGG 0.462463 8_4:+47432359 Msa1329140:five_prime_UTR
TAATCAAAATGGAATTTCTC+AGG 0.470538 8_4:+47434287 Msa1329140:CDS
TTCTCTCCAACGAGAGGGAG+AGG 0.474187 8_4:-47432061 None:intergenic
AGTTAAATTGTTGTATCCTC+GGG 0.477142 8_4:-47432108 None:intergenic
AACTAGCATCATGGTATTGG+TGG 0.481901 8_4:-47437416 None:intergenic
ATGATGAACAAGTTACTGAT+TGG 0.483191 8_4:+47437625 Msa1329140:CDS
AGAAGGATGGGTTGTATGCA+GGG 0.483470 8_4:+47437203 Msa1329140:CDS
AAAGATAAGAAGTATCCAAC+AGG 0.484211 8_4:+47434090 Msa1329140:CDS
TACAAAGGACGTGCCCCAAA+TGG 0.485596 8_4:+47434222 Msa1329140:CDS
GCTTATTATGTACACCAACT+TGG 0.486124 8_4:-47437951 None:intergenic
ACGAATAGAGCAACAAAAGC+AGG 0.489114 8_4:+47434120 Msa1329140:CDS
CCAGTTGCCACATGGAACTC+TGG 0.492908 8_4:+47437847 Msa1329140:CDS
TCCCGAGAGGAGTACTGAAA+AGG 0.495443 8_4:-47432007 None:intergenic
TGGTATGAAGTATAGTTAGG+AGG 0.495788 8_4:-47437351 None:intergenic
ATTGAACCATGGGATCTTCA+AGG 0.495896 8_4:+47433766 Msa1329140:CDS
GGTATGAAGTATAGTTAGGA+GGG 0.496460 8_4:-47437350 None:intergenic
ATGAAAGTGAAGGAAGGAAA+AGG 0.498702 8_4:-47431977 None:intergenic
TCAACAAGTTCTTCATCAGT+TGG 0.499544 8_4:-47433670 None:intergenic
AACTTGTTGATTACTACCTC+AGG 0.500136 8_4:+47433683 Msa1329140:CDS
CAAATGGACAGAAATCTGAT+TGG 0.510953 8_4:+47434238 Msa1329140:CDS
GTTGGATGAAAACGAAAGCC+TGG 0.518219 8_4:-47433652 None:intergenic
TATTGCTTTGTCTCTTCCTG+TGG 0.520396 8_4:-47434154 None:intergenic
GGGTGAGAATTGGTTCGGGT+TGG 0.520526 8_4:-47437330 None:intergenic
TGTTCATATATATGAACCTC+TGG 0.524534 8_4:+47438009 Msa1329140:three_prime_UTR
TCTCTATAAAATTGAACCAT+GGG 0.531197 8_4:+47433756 Msa1329140:CDS
TGATTACTACCTCAGGAAGA+AGG 0.532222 8_4:+47433690 Msa1329140:CDS
AACAGACAGGAAATGAAAAG+TGG 0.540578 8_4:-47432133 None:intergenic
GAAGAGATGAAAGTGAAGGA+AGG 0.540814 8_4:-47431983 None:intergenic
TTACCATGCTTATATATCTG+AGG 0.547268 8_4:+47432277 Msa1329140:five_prime_UTR
CACATGAAGAATAGCTGCAT+TGG 0.548314 8_4:-47437748 None:intergenic
ATCTCTATAAAATTGAACCA+TGG 0.552588 8_4:+47433755 Msa1329140:CDS
ACTAGCATCATGGTATTGGT+GGG 0.553019 8_4:-47437415 None:intergenic
GAAAAGGTAAGTTTCAAGAG+TGG 0.554530 8_4:-47431961 None:intergenic
CTCTCCAACGAGAGGGAGAG+GGG 0.557731 8_4:-47432059 None:intergenic
TATGGTGGTAACAGCAGTAA+TGG 0.564737 8_4:+47437600 Msa1329140:CDS
AGGATTTAGTGCTACAAACA+AGG 0.570577 8_4:+47432297 Msa1329140:five_prime_UTR
TAACTTGTACTGCAGGAAGA+AGG 0.571751 8_4:+47437186 Msa1329140:intron
CAATGCAGCTATTCTTCATG+TGG 0.572344 8_4:+47437749 Msa1329140:CDS
TTGTACTGCAGGAAGAAGGA+TGG 0.572577 8_4:+47437190 Msa1329140:intron
CACAAGGGGACAAAACAGAC+AGG 0.572681 8_4:-47432146 None:intergenic
ATCAGATTTCTGTCCATTTG+GGG 0.575645 8_4:-47434235 None:intergenic
AATAACCTTGATATTAAGTG+TGG 0.576631 8_4:-47432364 None:intergenic
GAAGTGATGAACAAAATGAC+TGG 0.576909 8_4:+47434052 Msa1329140:CDS
GCAGGATTCTGGAAAGCCAC+AGG 0.582522 8_4:+47434138 Msa1329140:CDS
AGGAGAAGAGATGAAAGTGA+AGG 0.582728 8_4:-47431987 None:intergenic
CCTTTGTTCTCTCCAACGAG+AGG 0.589394 8_4:-47432067 None:intergenic
GTTGGAGAAAACTAGCATCA+TGG 0.589690 8_4:-47437425 None:intergenic
TCTCTCCAACGAGAGGGAGA+GGG 0.591885 8_4:-47432060 None:intergenic
TTCTACCTCCAGTTGCCACA+TGG 0.595602 8_4:+47437839 Msa1329140:CDS
GGATTCAAGATCTGGCATGA+AGG 0.597988 8_4:-47437307 None:intergenic
CTTTGTTCTCTCCAACGAGA+GGG 0.605863 8_4:-47432066 None:intergenic
TGTACTGCAGGAAGAAGGAT+GGG 0.607538 8_4:+47437191 Msa1329140:intron
TGATCATCATACCAGTTACA+TGG 0.608098 8_4:-47437279 None:intergenic
TCGATACCTTGAAGATCCCA+TGG 0.613286 8_4:-47433772 None:intergenic
CTACTACTTCAAAACGATCG+TGG 0.616988 8_4:+47432226 Msa1329140:five_prime_UTR
TCTCCAACGAGAGGGAGAGG+GGG 0.622124 8_4:-47432058 None:intergenic
GAGTTCCATGTGGCAACTGG+AGG 0.627769 8_4:-47437844 None:intergenic
AATCTTCACTCACTTTATGG+TGG 0.628619 8_4:+47437585 Msa1329140:CDS
TGATGAGTATTGCTCCAAGT+TGG 0.635184 8_4:+47437937 Msa1329140:three_prime_UTR
AATCCTCAGATATATAAGCA+TGG 0.635473 8_4:-47432280 None:intergenic
AAGCTTATCTCATGAAATGG+TGG 0.636207 8_4:-47431841 None:intergenic
CTAGCATCATGGTATTGGTG+GGG 0.638906 8_4:-47437414 None:intergenic
TAGACGATACCTTCTTCCTG+AGG 0.649052 8_4:-47433699 None:intergenic
CCTCTCGTTGGAGAGAACAA+AGG 0.653372 8_4:+47432067 Msa1329140:five_prime_UTR
AAGAAAGGCAGAAAGACACA+AGG 0.658318 8_4:-47432162 None:intergenic
CGTTGGAGAGAACAAAGGAG+AGG 0.658962 8_4:+47432072 Msa1329140:five_prime_UTR
GAAAGGCAGAAAGACACAAG+GGG 0.665624 8_4:-47432160 None:intergenic
CTCCAAGTAGAATTCAAGTG+TGG 0.669661 8_4:-47432332 None:intergenic
AGAAAGGCAGAAAGACACAA+GGG 0.670147 8_4:-47432161 None:intergenic
GAGAGAGATCAGATCCCGAG+AGG 0.701888 8_4:-47432020 None:intergenic
TATATATATCCAGACTCCAG+AGG 0.705194 8_4:-47438025 None:intergenic
TTCACTTCCAGAGTTCCATG+TGG 0.729412 8_4:-47437854 None:intergenic
GGATGAAAACGAAAGCCTGG+AGG 0.739180 8_4:-47433649 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATAA+GGG - chr8_4:47434668-47434687 None:intergenic 0.0%
!! TAATAATAATAATAATAATA+AGG - chr8_4:47434669-47434688 None:intergenic 0.0%
!! TTATTATTATTATAAAATTT+AGG + chr8_4:47434752-47434771 Msa1329140:intron 0.0%
!! TATTATTATTATAAAATTTA+GGG + chr8_4:47434753-47434772 Msa1329140:intron 0.0%
!!! TTTTTTTTTTTTTAATAGCT+AGG + chr8_4:47432756-47432775 Msa1329140:intron 10.0%
!! AAAAAATATTAAATATGGAA+AGG - chr8_4:47432864-47432883 None:intergenic 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr8_4:47433323-47433342 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr8_4:47433324-47433343 None:intergenic 10.0%
!! TAAATGAAAAAATAATAATG+TGG + chr8_4:47433474-47433493 Msa1329140:intron 10.0%
!! TTTATTAAATGATAGTTATA+AGG - chr8_4:47435263-47435282 None:intergenic 10.0%
!!! ATATATGTTAATTATGTTTT+CGG + chr8_4:47435285-47435304 Msa1329140:intron 10.0%
!! TTGTAAAAATAAAAAAATCA+TGG - chr8_4:47435446-47435465 None:intergenic 10.0%
!! TATTTAGTAAATATATTTCA+AGG - chr8_4:47435485-47435504 None:intergenic 10.0%
!! AGAGTTATTATAAATATTAA+GGG - chr8_4:47436967-47436986 None:intergenic 10.0%
!! AAGAGTTATTATAAATATTA+AGG - chr8_4:47436968-47436987 None:intergenic 10.0%
!!! TGTATTTTAATTTTAATACT+AGG + chr8_4:47438059-47438078 Msa1329140:three_prime_UTR 10.0%
!! ATTTATTGTTATATATATGT+AGG - chr8_4:47438113-47438132 None:intergenic 10.0%
!! TAAAAAAAAAAAAAAACTGG+TGG - chr8_4:47432750-47432769 None:intergenic 15.0%
!!! ACTTTTTACAATGTAATTAT+GGG - chr8_4:47433013-47433032 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr8_4:47433258-47433277 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr8_4:47433259-47433278 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr8_4:47433322-47433341 None:intergenic 15.0%
!! AAAATTGTGTCAATTAAATT+GGG + chr8_4:47433359-47433378 Msa1329140:intron 15.0%
!!! ATGATTAATTTTCAACAATA+AGG - chr8_4:47433444-47433463 None:intergenic 15.0%
!! AAAAAAATAATTAACAAAGG+AGG - chr8_4:47433572-47433591 None:intergenic 15.0%
!!! AAAAAAATTCTGAGATAATA+TGG - chr8_4:47433833-47433852 None:intergenic 15.0%
!! TGAAAACAAAAAATTATACT+AGG + chr8_4:47433855-47433874 Msa1329140:intron 15.0%
!!! TAATAAAATGTTACATCTTT+TGG + chr8_4:47434603-47434622 Msa1329140:intron 15.0%
!!! ATAAAATTTAGGGTTAAATA+AGG + chr8_4:47434763-47434782 Msa1329140:intron 15.0%
!! CAATATTATTTATAATGATG+AGG + chr8_4:47435166-47435185 Msa1329140:intron 15.0%
!!! TTACTTATTTTGATAAGAAA+TGG + chr8_4:47435398-47435417 Msa1329140:intron 15.0%
!! AAAAATTACGTATTAATTAG+CGG - chr8_4:47435522-47435541 None:intergenic 15.0%
!! AAAAAAAAATCTTATGTGAT+CGG + chr8_4:47436008-47436027 Msa1329140:intron 15.0%
!!! TTGAAACTTTTAAAACTTAA+AGG - chr8_4:47436198-47436217 None:intergenic 15.0%
!!! AAAAATTTTGTCAAACTAAA+AGG + chr8_4:47436428-47436447 Msa1329140:intron 15.0%
!!! TAATAGATTGAGTAATTTTT+GGG - chr8_4:47437467-47437486 None:intergenic 15.0%
!!! ATAATAGATTGAGTAATTTT+TGG - chr8_4:47437468-47437487 None:intergenic 15.0%
!! GCATATTAATATATAGTATT+TGG + chr8_4:47437909-47437928 Msa1329140:three_prime_UTR 15.0%
!! AAGAGAAAAGATGATTTATT+AGG + chr8_4:47431920-47431939 Msa1329140:five_prime_UTR 20.0%
!! AGAGAAAAGATGATTTATTA+GGG + chr8_4:47431921-47431940 Msa1329140:five_prime_UTR 20.0%
!! CTTGATCTAGTATATTATAT+GGG + chr8_4:47432434-47432453 Msa1329140:intron 20.0%
!! TAATATAAATACCAGAATTG+TGG + chr8_4:47432516-47432535 Msa1329140:intron 20.0%
!!! TTATGATCAACTTATTTTGT+AGG + chr8_4:47432921-47432940 Msa1329140:intron 20.0%
!!! CTTTTTACAATGTAATTATG+GGG - chr8_4:47433012-47433031 None:intergenic 20.0%
!!! CACTTTTTACAATGTAATTA+TGG - chr8_4:47433014-47433033 None:intergenic 20.0%
!!! ATTGATTCATATTTCCTTAA+AGG - chr8_4:47433078-47433097 None:intergenic 20.0%
!! ATATGAATCAATGTTTCATA+AGG + chr8_4:47433086-47433105 Msa1329140:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr8_4:47433189-47433208 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr8_4:47433226-47433245 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr8_4:47433299-47433318 None:intergenic 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG + chr8_4:47433358-47433377 Msa1329140:intron 20.0%
!! CTTATAACAAAAGAAAAAGA+AGG - chr8_4:47433542-47433561 None:intergenic 20.0%
!!! TTATTTTTTTTTATGAGTGC+AGG + chr8_4:47433582-47433601 Msa1329140:intron 20.0%
!!! ATAATATGGATTGATTGTTA+AGG - chr8_4:47433819-47433838 None:intergenic 20.0%
!! AATATACTCAAAACAATTTC+TGG + chr8_4:47434173-47434192 Msa1329140:CDS 20.0%
!! ATAAAAAAGCAAAAAGAAGA+AGG - chr8_4:47434320-47434339 None:intergenic 20.0%
!!! TTCTTCTTTTTGCTTTTTTA+TGG + chr8_4:47434319-47434338 Msa1329140:intron 20.0%
!! AGACTAAATCTAAATCATTT+AGG + chr8_4:47434429-47434448 Msa1329140:intron 20.0%
!! AACACAAATATAAATCGTTT+AGG - chr8_4:47434548-47434567 None:intergenic 20.0%
!! ATATGTTTGCAAAATTTCAA+AGG - chr8_4:47434898-47434917 None:intergenic 20.0%
!!! AATTTTGCAAACATATTTAG+TGG + chr8_4:47434902-47434921 Msa1329140:intron 20.0%
!!! TCTAGCAATTTTTTTTAACA+AGG + chr8_4:47434939-47434958 Msa1329140:intron 20.0%
!! AAATTTATTCAAAAACGTGA+AGG + chr8_4:47435064-47435083 Msa1329140:intron 20.0%
!! AATTTATTCAAAAACGTGAA+GGG + chr8_4:47435065-47435084 Msa1329140:intron 20.0%
!! AAATCTATAACTTCAGATAA+AGG + chr8_4:47435576-47435595 Msa1329140:intron 20.0%
!!! ATCACTACTTTTAGATAATA+AGG - chr8_4:47435619-47435638 None:intergenic 20.0%
!! ATTTCCATAAATTTGTATTC+TGG - chr8_4:47435805-47435824 None:intergenic 20.0%
!! GAAATAGTTTATCAACTAAA+AGG - chr8_4:47436227-47436246 None:intergenic 20.0%
!!! CCTATTTTAAACTTTTGAAA+CGG - chr8_4:47436257-47436276 None:intergenic 20.0%
!! AAGTTTCAAAAGTTTCAAAT+AGG - chr8_4:47436336-47436355 None:intergenic 20.0%
!!! TTGAAACTTTTGAAACTTAA+AGG + chr8_4:47436338-47436357 Msa1329140:intron 20.0%
!! ATGGAAGAAATGAAAAATAT+AGG - chr8_4:47436472-47436491 None:intergenic 20.0%
!!! TTTTTCATTTCTTCCATATT+AGG + chr8_4:47436475-47436494 Msa1329140:intron 20.0%
!! AAAACAAAATCATCCTAATA+TGG - chr8_4:47436491-47436510 None:intergenic 20.0%
!! TAGACTATATTTAAGAGTTT+AGG - chr8_4:47436596-47436615 None:intergenic 20.0%
!!! TCTTATCTATCTTTTTCTAT+TGG - chr8_4:47436640-47436659 None:intergenic 20.0%
!! AATATATTGTTGAAAGATTG+CGG - chr8_4:47436780-47436799 None:intergenic 20.0%
!! CAAGTTATAATAGTTATCAA+TGG - chr8_4:47437173-47437192 None:intergenic 20.0%
! CCTTTATCTATTGTTAAGTT+TGG - chr8_4:47431883-47431902 None:intergenic 25.0%
! CCAAACTTAACAATAGATAA+AGG + chr8_4:47431880-47431899 Msa1329140:five_prime_UTR 25.0%
! AAGTTAAATTGTTGTATCCT+CGG - chr8_4:47432112-47432131 None:intergenic 25.0%
! AATAACCTTGATATTAAGTG+TGG - chr8_4:47432367-47432386 None:intergenic 25.0%
! GCTTGATCTAGTATATTATA+TGG + chr8_4:47432433-47432452 Msa1329140:intron 25.0%
! TCTAGTATATTATATGGGTT+TGG + chr8_4:47432439-47432458 Msa1329140:intron 25.0%
! AAAAAAAAAAACTGGTGGAA+AGG - chr8_4:47432745-47432764 None:intergenic 25.0%
! ATGTTTAAACGTGATTTACT+AGG + chr8_4:47432892-47432911 Msa1329140:intron 25.0%
!! TAAAGGAGTATAACTAAACT+AGG - chr8_4:47433061-47433080 None:intergenic 25.0%
! AGTTTAGTTATACTCCTTTA+AGG + chr8_4:47433061-47433080 Msa1329140:intron 25.0%
! TGTTTCATAAGGTAAAGTTA+TGG + chr8_4:47433097-47433116 Msa1329140:intron 25.0%
! GTTTCATAAGGTAAAGTTAT+GGG + chr8_4:47433098-47433117 Msa1329140:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr8_4:47433190-47433209 None:intergenic 25.0%
!!! TGAAATGGATCAGTTATTTT+GGG - chr8_4:47433211-47433230 None:intergenic 25.0%
!! TTGAAATGGATCAGTTATTT+TGG - chr8_4:47433212-47433231 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr8_4:47433300-47433319 None:intergenic 25.0%
! ATCTCTATAAAATTGAACCA+TGG + chr8_4:47433755-47433774 Msa1329140:CDS 25.0%
! TCTCTATAAAATTGAACCAT+GGG + chr8_4:47433756-47433775 Msa1329140:CDS 25.0%
!! AAAATTATACTAGGAGTACA+AGG + chr8_4:47433864-47433883 Msa1329140:intron 25.0%
! CAAACAGAATTATGCAAAAT+AGG + chr8_4:47434030-47434049 Msa1329140:intron 25.0%
!! AAGACTCTAGTATTTTACAA+AGG + chr8_4:47434207-47434226 Msa1329140:CDS 25.0%
! TAATCAAAATGGAATTTCTC+AGG + chr8_4:47434287-47434306 Msa1329140:CDS 25.0%
! ATTCTCATACAAATACAAGA+AGG + chr8_4:47434453-47434472 Msa1329140:intron 25.0%
! AAAAAATCGGTACTAAAGAT+GGG - chr8_4:47434637-47434656 None:intergenic 25.0%
!!! TTGTTTTTAAGTCAACTCAT+GGG - chr8_4:47435093-47435112 None:intergenic 25.0%
!!! AAGTTGTGATGAAAAGTATT+CGG + chr8_4:47435120-47435139 Msa1329140:intron 25.0%
! CAAAATAAGTAAAATGTACG+TGG - chr8_4:47435390-47435409 None:intergenic 25.0%
! AAAATAAAAAAATCATGGCG+TGG - chr8_4:47435441-47435460 None:intergenic 25.0%
! TGCAATGAAATACTTGAATA+TGG - chr8_4:47435867-47435886 None:intergenic 25.0%
! AAAAATGCACACATATAACT+CGG - chr8_4:47435975-47435994 None:intergenic 25.0%
!!! TTTTTTTGCATCCAACTTAA+AGG - chr8_4:47436165-47436184 None:intergenic 25.0%
!! CCGTTTCAAAAGTTTAAAAT+AGG + chr8_4:47436254-47436273 Msa1329140:intron 25.0%
!! CCTTTAAGTTTCAAACTAAA+AGG - chr8_4:47436281-47436300 None:intergenic 25.0%
!!! CCTTTTAGTTTGAAACTTAA+AGG + chr8_4:47436278-47436297 Msa1329140:intron 25.0%
! AAGTTTCGAAAGTTTCAATT+AGG - chr8_4:47436395-47436414 None:intergenic 25.0%
! TTGAAACTTTCGAAACTTAA+AGG + chr8_4:47436397-47436416 Msa1329140:intron 25.0%
!! TATAGGTCAAATATCACTTT+TGG - chr8_4:47436455-47436474 None:intergenic 25.0%
! TATATTTAAGAGTTTAGGAG+AGG - chr8_4:47436591-47436610 None:intergenic 25.0%
!!! ATTTGATGCATTTTTGTTGT+TGG + chr8_4:47436680-47436699 Msa1329140:intron 25.0%
!!! TTTGATGCATTTTTGTTGTT+GGG + chr8_4:47436681-47436700 Msa1329140:intron 25.0%
! ACACGCAATAAAATTTATTG+TGG + chr8_4:47436733-47436752 Msa1329140:intron 25.0%
!!! TATTGCATTAATTCTAGTTC+TGG - chr8_4:47437387-47437406 None:intergenic 25.0%
! TATATATGTAGGAACATTTC+CGG - chr8_4:47438102-47438121 None:intergenic 25.0%
GAAAAGCTTATCTCATGAAA+TGG - chr8_4:47431847-47431866 None:intergenic 30.0%
AGTTAAATTGTTGTATCCTC+GGG - chr8_4:47432111-47432130 None:intergenic 30.0%
AAAAAAGCAGCACTAAAGAA+AGG - chr8_4:47432180-47432199 None:intergenic 30.0%
TTACCATGCTTATATATCTG+AGG + chr8_4:47432277-47432296 Msa1329140:five_prime_UTR 30.0%
AATCCTCAGATATATAAGCA+TGG - chr8_4:47432283-47432302 None:intergenic 30.0%
ACAGTAAAGAAGAGAAACTA+AGG - chr8_4:47432465-47432484 None:intergenic 30.0%
TTAATGATCATCCACAATTC+TGG - chr8_4:47432530-47432549 None:intergenic 30.0%
!! CCTTTAGTTGTCTTTAGTTT+TGG - chr8_4:47432600-47432619 None:intergenic 30.0%
CCAAAACTAAAGACAACTAA+AGG + chr8_4:47432597-47432616 Msa1329140:intron 30.0%
! AAATAGTTAGCTGTTGACTA+AGG - chr8_4:47432635-47432654 None:intergenic 30.0%
ACAAGACTTTGATCTATGTT+CGG + chr8_4:47432691-47432710 Msa1329140:intron 30.0%
TTTACAATGTAATTATGGGG+AGG - chr8_4:47433009-47433028 None:intergenic 30.0%
AGGTTACAAAACAAAGTAGA+GGG - chr8_4:47433041-47433060 None:intergenic 30.0%
TAGGTTACAAAACAAAGTAG+AGG - chr8_4:47433042-47433061 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr8_4:47433315-47433334 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG + chr8_4:47433363-47433382 Msa1329140:intron 30.0%
!! ACGGAGGTAGTATTTTTATT+TGG + chr8_4:47433382-47433401 Msa1329140:intron 30.0%
!! GAGGTAGTATTTTTATTTGG+AGG + chr8_4:47433385-47433404 Msa1329140:intron 30.0%
!! AGTATTTTTATTTGGAGGAG+TGG + chr8_4:47433390-47433409 Msa1329140:intron 30.0%
!! GATAACACAACATTTGCTAT+TGG + chr8_4:47433997-47434016 Msa1329140:intron 30.0%
!! AAAGATAAGAAGTATCCAAC+AGG + chr8_4:47434090-47434109 Msa1329140:CDS 30.0%
!! TACTCAAAACAATTTCTGGT+TGG + chr8_4:47434177-47434196 Msa1329140:CDS 30.0%
!! ACTCAAAACAATTTCTGGTT+GGG + chr8_4:47434178-47434197 Msa1329140:CDS 30.0%
AATCAGATTTCTGTCCATTT+GGG - chr8_4:47434239-47434258 None:intergenic 30.0%
CGTCTTGAAACTAATCAAAA+TGG + chr8_4:47434276-47434295 Msa1329140:CDS 30.0%
!!! ACCATTTTGCTTTAAGAACA+AGG + chr8_4:47434392-47434411 Msa1329140:intron 30.0%
GAAAAAATCGGTACTAAAGA+TGG - chr8_4:47434638-47434657 None:intergenic 30.0%
AAGGGAAGAGATGAAAAAAT+CGG - chr8_4:47434650-47434669 None:intergenic 30.0%
!! CAACATTTAGGTTTTGTAGA+GGG - chr8_4:47434829-47434848 None:intergenic 30.0%
!! ACAACATTTAGGTTTTGTAG+AGG - chr8_4:47434830-47434849 None:intergenic 30.0%
ATATGAATCAAAAGTCGTGA+CGG - chr8_4:47434853-47434872 None:intergenic 30.0%
!!! CTTGTTTTTAAGTCAACTCA+TGG - chr8_4:47435094-47435113 None:intergenic 30.0%
! CGTGGAGTAAAATTGATAAT+TGG - chr8_4:47435372-47435391 None:intergenic 30.0%
TCACATATTCTTCATACGTT+TGG - chr8_4:47435677-47435696 None:intergenic 30.0%
GAGACCAGAATACAAATTTA+TGG + chr8_4:47435798-47435817 Msa1329140:intron 30.0%
!!! TTGCATTAGTTTTATGCAGT+CGG + chr8_4:47435882-47435901 Msa1329140:intron 30.0%
AACATTATCAGTTGAGTTTG+CGG - chr8_4:47435913-47435932 None:intergenic 30.0%
AAAATGCACACATATAACTC+GGG - chr8_4:47435974-47435993 None:intergenic 30.0%
AAAATCTTATGTGATCGGTT+TGG + chr8_4:47436013-47436032 Msa1329140:intron 30.0%
!!! GTCAATGCTGTTTTTGTTTT+TGG - chr8_4:47436071-47436090 None:intergenic 30.0%
CTCAAGTTAATCCTTTAAGT+TGG + chr8_4:47436151-47436170 Msa1329140:intron 30.0%
!!! TTAAACTTTTGAAACGGTGA+TGG - chr8_4:47436251-47436270 None:intergenic 30.0%
TGAAACTTAAAGGACTAACT+TGG + chr8_4:47436288-47436307 Msa1329140:intron 30.0%
TGGGAACAAAAAACAATAAG+AGG + chr8_4:47436700-47436719 Msa1329140:intron 30.0%
ATTGCGGATATAAGTATGTA+GGG - chr8_4:47436764-47436783 None:intergenic 30.0%
!!! TTTTGGCTTGAAAATTCCAA+CGG - chr8_4:47436817-47436836 None:intergenic 30.0%
! GTTCATAGGATTTGCAATTT+TGG - chr8_4:47436834-47436853 None:intergenic 30.0%
GAGTTAAAATCGTAGTTCAT+AGG - chr8_4:47436848-47436867 None:intergenic 30.0%
!!! CCTTTTGAGATATGTATTGA+TGG - chr8_4:47436910-47436929 None:intergenic 30.0%
CCATCAATACATATCTCAAA+AGG + chr8_4:47436907-47436926 Msa1329140:intron 30.0%
TCAAAAGGTTATAATCGATG+TGG + chr8_4:47436922-47436941 Msa1329140:intron 30.0%
TCAAATTAGACATTACGTTC+AGG - chr8_4:47437012-47437031 None:intergenic 30.0%
!! TGTGTATACTTTCTGCTTTT+AGG + chr8_4:47437083-47437102 Msa1329140:intron 30.0%
! ACTATTATAACTTGTACTGC+AGG + chr8_4:47437179-47437198 Msa1329140:intron 30.0%
CATGAGCATGATGATTATAA+GGG - chr8_4:47437491-47437510 None:intergenic 30.0%
CAAAATCTTCACTCACTTTA+TGG + chr8_4:47437582-47437601 Msa1329140:CDS 30.0%
ATGATGAACAAGTTACTGAT+TGG + chr8_4:47437625-47437644 Msa1329140:CDS 30.0%
! CTCAGAAACATCATTCTTTT+TGG - chr8_4:47437805-47437824 None:intergenic 30.0%
! CAAAAAGAATGATGTTTCTG+AGG + chr8_4:47437803-47437822 Msa1329140:CDS 30.0%
TGTTCATATATATGAACCTC+TGG + chr8_4:47438009-47438028 Msa1329140:three_prime_UTR 30.0%
AAGCTTATCTCATGAAATGG+TGG - chr8_4:47431844-47431863 None:intergenic 35.0%
! TAAGTTTGGAGCTAGATTTC+AGG - chr8_4:47431869-47431888 None:intergenic 35.0%
GAAAAGGTAAGTTTCAAGAG+TGG - chr8_4:47431964-47431983 None:intergenic 35.0%
ATGAAAGTGAAGGAAGGAAA+AGG - chr8_4:47431980-47431999 None:intergenic 35.0%
AACAGACAGGAAATGAAAAG+TGG - chr8_4:47432136-47432155 None:intergenic 35.0%
!!! GCTTTTTTGTCTGTTTCTGT+TGG + chr8_4:47432192-47432211 Msa1329140:five_prime_UTR 35.0%
!!! ATCGTTTTGAAGTAGTAGCT+TGG - chr8_4:47432224-47432243 None:intergenic 35.0%
AGGATTTAGTGCTACAAACA+AGG + chr8_4:47432297-47432316 Msa1329140:five_prime_UTR 35.0%
ATCCACACTTGAATTCTACT+TGG + chr8_4:47432330-47432349 Msa1329140:five_prime_UTR 35.0%
TGCATCCACACTTAATATCA+AGG + chr8_4:47432359-47432378 Msa1329140:five_prime_UTR 35.0%
GGCATGAAAAGCTAAATGTT+TGG + chr8_4:47432942-47432961 Msa1329140:intron 35.0%
AATGTAATTATGGGGAGGAA+GGG - chr8_4:47433004-47433023 None:intergenic 35.0%
GTTACAAAACAAAGTAGAGG+GGG - chr8_4:47433039-47433058 None:intergenic 35.0%
GGTTACAAAACAAAGTAGAG+GGG - chr8_4:47433040-47433059 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr8_4:47433176-47433195 None:intergenic 35.0%
!!! TGCAGGTTTTAATTCTTCTG+AGG + chr8_4:47433599-47433618 Msa1329140:intron 35.0%
!!! AGGTTTTAATTCTTCTGAGG+TGG + chr8_4:47433602-47433621 Msa1329140:intron 35.0%
TCAACAAGTTCTTCATCAGT+TGG - chr8_4:47433673-47433692 None:intergenic 35.0%
!! AACTTGTTGATTACTACCTC+AGG + chr8_4:47433683-47433702 Msa1329140:CDS 35.0%
GAAGTGATGAACAAAATGAC+TGG + chr8_4:47434052-47434071 Msa1329140:CDS 35.0%
ATCAGATTTCTGTCCATTTG+GGG - chr8_4:47434238-47434257 None:intergenic 35.0%
CAATCAGATTTCTGTCCATT+TGG - chr8_4:47434240-47434259 None:intergenic 35.0%
CAAATGGACAGAAATCTGAT+TGG + chr8_4:47434238-47434257 Msa1329140:CDS 35.0%
GCAAAATGGTACATATCTAG+AGG - chr8_4:47434382-47434401 None:intergenic 35.0%
! GCCTTGTTCTTAAAGCAAAA+TGG - chr8_4:47434396-47434415 None:intergenic 35.0%
!! TTGTGATGAAAAGTATTCGG+AGG + chr8_4:47435123-47435142 Msa1329140:intron 35.0%
TTTAAGAGTTTAGGAGAGGA+GGG - chr8_4:47436587-47436606 None:intergenic 35.0%
ATTTAAGAGTTTAGGAGAGG+AGG - chr8_4:47436588-47436607 None:intergenic 35.0%
GATTGCGGATATAAGTATGT+AGG - chr8_4:47436765-47436784 None:intergenic 35.0%
ATGGAACGCATAGATATCAA+TGG - chr8_4:47437154-47437173 None:intergenic 35.0%
ATGATCAATCACCATGTAAC+TGG + chr8_4:47437268-47437287 Msa1329140:CDS 35.0%
TGATCATCATACCAGTTACA+TGG - chr8_4:47437282-47437301 None:intergenic 35.0%
GGTATGAAGTATAGTTAGGA+GGG - chr8_4:47437353-47437372 None:intergenic 35.0%
TGGTATGAAGTATAGTTAGG+AGG - chr8_4:47437354-47437373 None:intergenic 35.0%
GAGTGGTATGAAGTATAGTT+AGG - chr8_4:47437357-47437376 None:intergenic 35.0%
GAAAACTAGCATCATGGTAT+TGG - chr8_4:47437422-47437441 None:intergenic 35.0%
!! GAGTAATTTTTGGGCTTTCA+AGG - chr8_4:47437458-47437477 None:intergenic 35.0%
GCATGAGCATGATGATTATA+AGG - chr8_4:47437492-47437511 None:intergenic 35.0%
! GTGAGTGAAGATTTTGTTGA+TGG - chr8_4:47437578-47437597 None:intergenic 35.0%
AATCTTCACTCACTTTATGG+TGG + chr8_4:47437585-47437604 Msa1329140:CDS 35.0%
GCTTATTATGTACACCAACT+TGG - chr8_4:47437954-47437973 None:intergenic 35.0%
ATGAACAGCTTACAGCATTA+AGG - chr8_4:47437996-47438015 None:intergenic 35.0%
TATATATATCCAGACTCCAG+AGG - chr8_4:47438028-47438047 None:intergenic 35.0%
! ATGAAATGGTGGCGCTAAAA+CGG - chr8_4:47431833-47431852 None:intergenic 40.0%
GAAGAGATGAAAGTGAAGGA+AGG - chr8_4:47431986-47432005 None:intergenic 40.0%
AGGAGAAGAGATGAAAGTGA+AGG - chr8_4:47431990-47432009 None:intergenic 40.0%
!!! AGGTTTTAGTTCAATTCCCG+AGG + chr8_4:47432092-47432111 Msa1329140:five_prime_UTR 40.0%
AGAAAGGCAGAAAGACACAA+GGG - chr8_4:47432164-47432183 None:intergenic 40.0%
AAGAAAGGCAGAAAGACACA+AGG - chr8_4:47432165-47432184 None:intergenic 40.0%
CTACTACTTCAAAACGATCG+TGG + chr8_4:47432226-47432245 Msa1329140:five_prime_UTR 40.0%
CTCCAAGTAGAATTCAAGTG+TGG - chr8_4:47432335-47432354 None:intergenic 40.0%
GACTTTGATCTATGTTCGGT+TGG + chr8_4:47432695-47432714 Msa1329140:intron 40.0%
TCAAATGAATGATGCTCTGC+AGG - chr8_4:47432975-47432994 None:intergenic 40.0%
CAATGTAATTATGGGGAGGA+AGG - chr8_4:47433005-47433024 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG + chr8_4:47433366-47433385 Msa1329140:intron 40.0%
! ACATTTTCACATGTACCTCC+AGG + chr8_4:47433634-47433653 Msa1329140:CDS 40.0%
TGATTACTACCTCAGGAAGA+AGG + chr8_4:47433690-47433709 Msa1329140:CDS 40.0%
ATTGAACCATGGGATCTTCA+AGG + chr8_4:47433766-47433785 Msa1329140:CDS 40.0%
! TACTAGGAGTACAAGGAGTA+CGG + chr8_4:47433871-47433890 Msa1329140:intron 40.0%
!! CTATTCGTTCTAGTTCCTGT+TGG - chr8_4:47434108-47434127 None:intergenic 40.0%
ACGAATAGAGCAACAAAAGC+AGG + chr8_4:47434120-47434139 Msa1329140:CDS 40.0%
TATTGCTTTGTCTCTTCCTG+TGG - chr8_4:47434157-47434176 None:intergenic 40.0%
! ATATAACTCGGGTTCGAGTT+CGG - chr8_4:47435963-47435982 None:intergenic 40.0%
!! ATCGGTTTGGCTTGATCTTA+TGG + chr8_4:47436026-47436045 Msa1329140:intron 40.0%
AGGAGGGATTTCAAAAATCG+AGG - chr8_4:47436571-47436590 None:intergenic 40.0%
! GCAGAAAGTATACACATGCA+TGG - chr8_4:47437079-47437098 None:intergenic 40.0%
! TAACTTGTACTGCAGGAAGA+AGG + chr8_4:47437186-47437205 Msa1329140:intron 40.0%
ATAGTTAGGAGGGTGAGAAT+TGG - chr8_4:47437343-47437362 None:intergenic 40.0%
!! ACTAGCATCATGGTATTGGT+GGG - chr8_4:47437418-47437437 None:intergenic 40.0%
! AACTAGCATCATGGTATTGG+TGG - chr8_4:47437419-47437438 None:intergenic 40.0%
GTTGGAGAAAACTAGCATCA+TGG - chr8_4:47437428-47437447 None:intergenic 40.0%
!! ATTTTTGGGCTTTCAAGGTG+TGG - chr8_4:47437453-47437472 None:intergenic 40.0%
TATGGTGGTAACAGCAGTAA+TGG + chr8_4:47437600-47437619 Msa1329140:CDS 40.0%
CACATGAAGAATAGCTGCAT+TGG - chr8_4:47437751-47437770 None:intergenic 40.0%
CAATGCAGCTATTCTTCATG+TGG + chr8_4:47437749-47437768 Msa1329140:CDS 40.0%
! TGATGAGTATTGCTCCAAGT+TGG + chr8_4:47437937-47437956 Msa1329140:three_prime_UTR 40.0%
!! ATATATGAACCTCTGGAGTC+TGG + chr8_4:47438016-47438035 Msa1329140:three_prime_UTR 40.0%
! CTCCTTTTCAGTACTCCTCT+CGG + chr8_4:47432005-47432024 Msa1329140:five_prime_UTR 45.0%
! TCCTTTTCAGTACTCCTCTC+GGG + chr8_4:47432006-47432025 Msa1329140:five_prime_UTR 45.0%
CTTTGTTCTCTCCAACGAGA+GGG - chr8_4:47432069-47432088 None:intergenic 45.0%
GAAAGGCAGAAAGACACAAG+GGG - chr8_4:47432163-47432182 None:intergenic 45.0%
GAATGATGCTCTGCAGGTAT+AGG - chr8_4:47432969-47432988 None:intergenic 45.0%
ATGGGTCAGTTATTCCGGAA+CGG - chr8_4:47433171-47433190 None:intergenic 45.0%
GTTGGATGAAAACGAAAGCC+TGG - chr8_4:47433655-47433674 None:intergenic 45.0%
TAGACGATACCTTCTTCCTG+AGG - chr8_4:47433702-47433721 None:intergenic 45.0%
TCGATACCTTGAAGATCCCA+TGG - chr8_4:47433775-47433794 None:intergenic 45.0%
GAGCAACAAAAGCAGGATTC+TGG + chr8_4:47434127-47434146 Msa1329140:CDS 45.0%
!! AGTCGTGACGGACAACATTT+AGG - chr8_4:47434841-47434860 None:intergenic 45.0%
! TATAACTCGGGTTCGAGTTC+GGG - chr8_4:47435962-47435981 None:intergenic 45.0%
AATTCCAACGGTGGTTGAGA+GGG - chr8_4:47436805-47436824 None:intergenic 45.0%
AAATTCCAACGGTGGTTGAG+AGG - chr8_4:47436806-47436825 None:intergenic 45.0%
TGGCTTGAAAATTCCAACGG+TGG - chr8_4:47436814-47436833 None:intergenic 45.0%
! CATTACGTTCAGGAGTGTGA+AGG - chr8_4:47437002-47437021 None:intergenic 45.0%
TTGTACTGCAGGAAGAAGGA+TGG + chr8_4:47437190-47437209 Msa1329140:intron 45.0%
TGTACTGCAGGAAGAAGGAT+GGG + chr8_4:47437191-47437210 Msa1329140:intron 45.0%
!! AAGAAGGATGGGTTGTATGC+AGG + chr8_4:47437202-47437221 Msa1329140:CDS 45.0%
!! AGAAGGATGGGTTGTATGCA+GGG + chr8_4:47437203-47437222 Msa1329140:CDS 45.0%
GGATTCAAGATCTGGCATGA+AGG - chr8_4:47437310-47437329 None:intergenic 45.0%
TAGGAGGGTGAGAATTGGTT+CGG - chr8_4:47437338-47437357 None:intergenic 45.0%
!! CTAGTTCTGGTTTGCATGAG+TGG - chr8_4:47437374-47437393 None:intergenic 45.0%
!! CTAGCATCATGGTATTGGTG+GGG - chr8_4:47437417-47437436 None:intergenic 45.0%
TTCACTTCCAGAGTTCCATG+TGG - chr8_4:47437857-47437876 None:intergenic 45.0%
!!! GTTAAAATATTATTTTTATT+TGG + chr8_4:47432409-47432428 Msa1329140:intron 5.0%
!!! AATATAAATTAATTTTTTTG+AGG - chr8_4:47432568-47432587 None:intergenic 5.0%
!! TATTAAAAAAAAAAAAAAAC+TGG - chr8_4:47432753-47432772 None:intergenic 5.0%
!! CAAAAAAAAAATATTAAATA+TGG - chr8_4:47432869-47432888 None:intergenic 5.0%
!! TAAAAAAAAATAATTAACAA+AGG - chr8_4:47433575-47433594 None:intergenic 5.0%
!!! TGTTAAAAAATTTTTTTTTT+TGG + chr8_4:47435012-47435031 Msa1329140:intron 5.0%
!! TATTAAAATTAAAATACATT+TGG - chr8_4:47438057-47438076 None:intergenic 5.0%
!! TCCCGAGAGGAGTACTGAAA+AGG - chr8_4:47432010-47432029 None:intergenic 50.0%
CCTTTGTTCTCTCCAACGAG+AGG - chr8_4:47432070-47432089 None:intergenic 50.0%
CCTCTCGTTGGAGAGAACAA+AGG + chr8_4:47432067-47432086 Msa1329140:five_prime_UTR 50.0%
CGTTGGAGAGAACAAAGGAG+AGG + chr8_4:47432072-47432091 Msa1329140:five_prime_UTR 50.0%
CACAAGGGGACAAAACAGAC+AGG - chr8_4:47432149-47432168 None:intergenic 50.0%
GTCAGTTATTCCGGAACGGA+GGG - chr8_4:47433167-47433186 None:intergenic 50.0%
GGATGAAAACGAAAGCCTGG+AGG - chr8_4:47433652-47433671 None:intergenic 50.0%
TACAAAGGACGTGCCCCAAA+TGG + chr8_4:47434222-47434241 Msa1329140:CDS 50.0%
TCATGGCGTGGAGAAGCAAT+GGG - chr8_4:47435429-47435448 None:intergenic 50.0%
ATCATGGCGTGGAGAAGCAA+TGG - chr8_4:47435430-47435449 None:intergenic 50.0%
! ATAACTCGGGTTCGAGTTCG+GGG - chr8_4:47435961-47435980 None:intergenic 50.0%
ATTCCAACGGTGGTTGAGAG+GGG - chr8_4:47436804-47436823 None:intergenic 50.0%
!! GTGAGAATTGGTTCGGGTTG+GGG - chr8_4:47437331-47437350 None:intergenic 50.0%
!! GGTGAGAATTGGTTCGGGTT+GGG - chr8_4:47437332-47437351 None:intergenic 50.0%
! AGGAGGGTGAGAATTGGTTC+GGG - chr8_4:47437337-47437356 None:intergenic 50.0%
GGCTTTCAAGGTGTGGAAGT+TGG - chr8_4:47437446-47437465 None:intergenic 50.0%
TTCTACCTCCAGTTGCCACA+TGG + chr8_4:47437839-47437858 Msa1329140:CDS 50.0%
GGCAATCGATGATCAGTTGC+CGG + chr8_4:47438080-47438099 Msa1329140:three_prime_UTR 50.0%
GAGAGAGATCAGATCCCGAG+AGG - chr8_4:47432023-47432042 None:intergenic 55.0%
TCTCTCCAACGAGAGGGAGA+GGG - chr8_4:47432063-47432082 None:intergenic 55.0%
TTCTCTCCAACGAGAGGGAG+AGG - chr8_4:47432064-47432083 None:intergenic 55.0%
TCTTCCTACTCCCTCCGTTC+CGG + chr8_4:47433154-47433173 Msa1329140:intron 55.0%
TATTCCGGAACGGAGGGAGT+AGG - chr8_4:47433161-47433180 None:intergenic 55.0%
GGTCAGTTATTCCGGAACGG+AGG - chr8_4:47433168-47433187 None:intergenic 55.0%
! GCAGGATTCTGGAAAGCCAC+AGG + chr8_4:47434138-47434157 Msa1329140:CDS 55.0%
TTTCCCCTCTCAACCACCGT+TGG + chr8_4:47436798-47436817 Msa1329140:intron 55.0%
! CGGGTTGGGGATTCAAGATC+TGG - chr8_4:47437318-47437337 None:intergenic 55.0%
!! GGGTGAGAATTGGTTCGGGT+TGG - chr8_4:47437333-47437352 None:intergenic 55.0%
GAGTTCCATGTGGCAACTGG+AGG - chr8_4:47437847-47437866 None:intergenic 55.0%
CCAGAGTTCCATGTGGCAAC+TGG - chr8_4:47437850-47437869 None:intergenic 55.0%
CCAGTTGCCACATGGAACTC+TGG + chr8_4:47437847-47437866 Msa1329140:CDS 55.0%
TCTCCAACGAGAGGGAGAGG+GGG - chr8_4:47432061-47432080 None:intergenic 60.0%
CTCTCCAACGAGAGGGAGAG+GGG - chr8_4:47432062-47432081 None:intergenic 60.0%
TCTCCCCCTCTCCCTCTCGT+TGG + chr8_4:47432055-47432074 Msa1329140:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 47431798 47438135 47431798 ID=Msa1329140;Name=Msa1329140
chr8_4 mRNA 47431798 47438135 47431798 ID=Msa1329140-mRNA-1;Parent=Msa1329140;Name=Msa1329140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=607|1|1|1|0.66|0.5|4|260|368
chr8_4 exon 47431798 47432380 47431798 ID=Msa1329140-mRNA-1:exon:13607;Parent=Msa1329140-mRNA-1
chr8_4 exon 47433604 47433787 47433604 ID=Msa1329140-mRNA-1:exon:13608;Parent=Msa1329140-mRNA-1
chr8_4 exon 47434037 47434308 47434037 ID=Msa1329140-mRNA-1:exon:13609;Parent=Msa1329140-mRNA-1
chr8_4 exon 47437201 47438135 47437201 ID=Msa1329140-mRNA-1:exon:13610;Parent=Msa1329140-mRNA-1
chr8_4 five_prime_UTR 47431798 47432380 47431798 ID=Msa1329140-mRNA-1:five_prime_utr;Parent=Msa1329140-mRNA-1
chr8_4 five_prime_UTR 47433604 47433627 47433604 ID=Msa1329140-mRNA-1:five_prime_utr;Parent=Msa1329140-mRNA-1
chr8_4 CDS 47433628 47433787 47433628 ID=Msa1329140-mRNA-1:cds;Parent=Msa1329140-mRNA-1
chr8_4 CDS 47434037 47434308 47434037 ID=Msa1329140-mRNA-1:cds;Parent=Msa1329140-mRNA-1
chr8_4 CDS 47437201 47437875 47437201 ID=Msa1329140-mRNA-1:cds;Parent=Msa1329140-mRNA-1
chr8_4 three_prime_UTR 47437876 47438135 47437876 ID=Msa1329140-mRNA-1:three_prime_utr;Parent=Msa1329140-mRNA-1
Gene Sequence

>Msa1329140

ATGAATACATTTTCACATGTACCTCCAGGCTTTCGTTTTCATCCAACTGATGAAGAACTTGTTGATTACTACCTCAGGAAGAAGGTATCGTCTAAAAAGATTGATCTCGATGTCATCAAAGACGTTGATCTCTATAAAATTGAACCATGGGATCTTCAAGAATTATGCAAAATAGGAAGTGATGAACAAAATGACTGGTATTTCTTTAGTCATAAAGATAAGAAGTATCCAACAGGAACTAGAACGAATAGAGCAACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGACAAAGCAATATACTCAAAACAATTTCTGGTTGGGATGAGAAAGACTCTAGTATTTTACAAAGGACGTGCCCCAAATGGACAGAAATCTGATTGGATCATGCATGAGTATCGTCTTGAAACTAATCAAAATGGAATTTCTCAGGAAGAAGGATGGGTTGTATGCAGGGTATTCAAGAAAAGAATGACAACAGTGCAGAAAATGAATGAATATGATCAATCACCATGTAACTGGTATGATGATCAAGTTTCCTTCATGCCAGATCTTGAATCCCCAACCCGAACCAATTCTCACCCTCCTAACTATACTTCATACCACTCATGCAAACCAGAACTAGAATTAATGCAATATAACACACCCCACCAATACCATGATGCTAGTTTTCTCCAACTTCCACACCTTGAAAGCCCAAAAATTACTCAATCTATTATCCCTTATAATCATCATGCTCATGCAAACAATAACAATATTGCACTTACTCAACATCAGCAACAACAACAGATGCAATATTTTCAGTACCATCAACAAAATCTTCACTCACTTTATGGTGGTAACAGCAGTAATGGCAATGATGAACAAGTTACTGATTGGAGAGTGCTTGACAAGTTTGTTGCTTCTCAGCTAAGTCATGAAGAAAATAATAATAATAATAATCAAGATCATGTTTCTAATAAAGAAGCTAGTTCTTTCTCCAATGCAGCTATTCTTCATGTGGCTGAACAGATTACTCTTCTTGCTAATGAATCCAAAAAGAATGATGTTTCTGAGGAACATGCTTCAACTTCTACCTCCAGTTGCCACATGGAACTCTGGAAGTGA
Protein sequence

>Msa1329140

MNTFSHVPPGFRFHPTDEELVDYYLRKKVSSKKIDLDVIKDVDLYKIEPWDLQELCKIGSDEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKQFLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNQNGISQEEGWVVCRVFKKRMTTVQKMNEYDQSPCNWYDDQVSFMPDLESPTRTNSHPPNYTSYHSCKPELELMQYNTPHQYHDASFLQLPHLESPKITQSIIPYNHHAHANNNNIALTQHQQQQQMQYFQYHQQNLHSLYGGNSSNGNDEQVTDWRVLDKFVASQLSHEENNNNNNQDHVSNKEASSFSNAAILHVAEQITLLANESKKNDVSEEHASTSTSSCHMELWK*