AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1329190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329190 MtrunA17_Chr4g0056541 95.935 369 9 2 1 368 1 364 0.0 740
Msa1329190 MtrunA17_Chr4g0018391 65.549 328 85 10 1 312 1 316 1.46e-145 416
Msa1329190 MtrunA17_Chr5g0398971 60.471 382 104 16 1 368 1 349 2.22e-144 412
Msa1329190 MtrunA17_Chr5g0405211 55.128 312 108 8 5 307 6 294 1.26e-105 314
Msa1329190 MtrunA17_Chr8g0372121 52.229 314 106 4 5 316 4 275 1.90e-103 307
Msa1329190 MtrunA17_Chr1g0200561 75.641 156 38 0 1 156 13 168 1.26e-87 268
Msa1329190 MtrunA17_Chr8g0346001 48.204 334 144 8 1 307 9 340 5.82e-87 269
Msa1329190 MtrunA17_Chr2g0309331 46.061 330 142 6 7 324 10 315 6.36e-84 258
Msa1329190 MtrunA17_Chr4g0017921 75.497 151 36 1 7 157 8 157 4.60e-81 251
Msa1329190 MtrunA17_Chr2g0309891 54.217 166 72 2 7 169 6 170 2.29e-62 203
Msa1329190 MtrunA17_Chr3g0091921 60.127 158 54 3 7 159 16 169 1.65e-61 199
Msa1329190 MtrunA17_Chr6g0484441 53.801 171 73 2 6 173 4 171 4.98e-61 199
Msa1329190 MtrunA17_Chr4g0060931 60.000 155 53 3 7 156 17 167 2.30e-59 196
Msa1329190 MtrunA17_Chr6g0481091 53.289 152 68 2 7 156 6 156 1.23e-58 190
Msa1329190 MtrunA17_Chr2g0316971 57.143 161 60 3 5 159 21 178 2.55e-58 194
Msa1329190 MtrunA17_Chr3g0109821 51.829 164 73 3 7 166 6 167 7.41e-57 196
Msa1329190 MtrunA17_Chr1g0147421 56.863 153 60 3 7 156 27 176 2.17e-56 188
Msa1329190 MtrunA17_Chr5g0433781 50.867 173 76 3 7 171 6 177 4.17e-56 194
Msa1329190 MtrunA17_Chr3g0139331 54.605 152 64 2 7 156 11 159 4.31e-56 187
Msa1329190 MtrunA17_Chr6g0453451 55.844 154 61 3 7 156 20 170 1.46e-55 184
Msa1329190 MtrunA17_Chr4g0042561 50.292 171 74 3 5 167 7 174 2.41e-55 182
Msa1329190 MtrunA17_Chr2g0312321 54.321 162 66 3 5 163 9 165 2.58e-55 183
Msa1329190 MtrunA17_Chr7g0217721 53.409 176 55 4 10 165 22 190 3.89e-55 184
Msa1329190 MtrunA17_Chr7g0253011 55.758 165 61 4 7 163 17 177 5.15e-55 185
Msa1329190 MtrunA17_Chr5g0417791 49.689 161 72 2 6 160 2 159 5.74e-54 179
Msa1329190 MtrunA17_Chr1g0183741 52.229 157 68 3 5 159 8 159 6.41e-54 179
Msa1329190 MtrunA17_Chr7g0252971 47.904 167 69 3 5 156 6 169 1.27e-53 180
Msa1329190 MtrunA17_Chr7g0261411 53.289 152 64 3 5 154 8 154 2.03e-53 178
Msa1329190 MtrunA17_Chr8g0361731 47.619 168 72 3 9 163 16 180 9.42e-53 179
Msa1329190 MtrunA17_Chr7g0214071 49.693 163 74 2 6 166 14 170 6.49e-52 173
Msa1329190 MtrunA17_Chr5g0400461 50.314 159 70 3 5 156 4 160 7.72e-52 175
Msa1329190 MtrunA17_Chr5g0417001 47.337 169 74 3 7 163 14 179 9.73e-52 177
Msa1329190 MtrunA17_Chr6g0453131 46.328 177 78 4 1 163 9 182 1.18e-51 176
Msa1329190 MtrunA17_Chr6g0461661 47.904 167 78 3 7 167 18 181 1.27e-51 176
Msa1329190 MtrunA17_Chr3g0124761 49.390 164 74 3 1 159 1 160 2.15e-51 173
Msa1329190 MtrunA17_Chr8g0384721 47.674 172 79 4 1 166 1 167 4.80e-51 172
Msa1329190 MtrunA17_Chr4g0054791 51.592 157 70 3 5 156 4 159 6.99e-51 172
Msa1329190 MtrunA17_Chr3g0130731 48.780 164 74 4 7 165 7 165 7.83e-51 171
Msa1329190 MtrunA17_Chr2g0318081 51.316 152 69 2 7 156 16 164 1.54e-50 172
Msa1329190 MtrunA17_Chr7g0217711 60.448 134 46 2 10 143 22 148 1.90e-50 167
Msa1329190 MtrunA17_Chr3g0128111 51.007 149 70 2 10 156 45 192 2.02e-50 169
Msa1329190 MtrunA17_Chr2g0318101 43.814 194 86 6 6 183 14 200 2.66e-50 172
Msa1329190 MtrunA17_Chr5g0428991 50.955 157 74 2 3 157 21 176 1.08e-49 176
Msa1329190 MtrunA17_Chr7g0263931 49.057 159 70 3 6 156 10 165 1.86e-49 169
Msa1329190 MtrunA17_Chr4g0047841 42.784 194 77 4 6 168 14 204 3.09e-49 169
Msa1329190 MtrunA17_Chr8g0359921 45.882 170 85 2 7 172 14 180 3.17e-49 168
Msa1329190 MtrunA17_Chr3g0144271 58.955 134 49 3 7 137 23 153 4.34e-49 171
Msa1329190 MtrunA17_Chr3g0130101 50.993 151 69 3 9 156 9 157 1.08e-48 167
Msa1329190 MtrunA17_Chr3g0128151 35.740 277 149 7 3 270 18 274 2.32e-48 172
Msa1329190 MtrunA17_Chr2g0311651 45.455 176 76 4 7 164 21 194 2.96e-48 165
Msa1329190 MtrunA17_Chr1g0197351 53.205 156 64 3 9 156 44 198 3.67e-48 169
Msa1329190 MtrunA17_Chr8g0364791 46.629 178 86 5 9 180 8 182 4.34e-48 168
Msa1329190 MtrunA17_Chr2g0311661 44.199 181 81 4 7 169 20 198 7.16e-48 164
Msa1329190 MtrunA17_Chr4g0076731 48.344 151 74 2 7 156 54 201 2.55e-47 166
Msa1329190 MtrunA17_Chr2g0326361 44.186 172 84 4 8 171 15 182 3.15e-46 160
Msa1329190 MtrunA17_Chr3g0092671 47.239 163 79 4 9 167 7 166 6.68e-46 164
Msa1329190 MtrunA17_Chr8g0384201 43.750 192 100 5 9 195 8 196 7.73e-46 163
Msa1329190 MtrunA17_Chr1g0201021 46.067 178 85 6 9 179 21 194 1.26e-45 164
Msa1329190 MtrunA17_Chr5g0442771 45.732 164 72 4 7 156 18 178 1.67e-45 158
Msa1329190 MtrunA17_Chr1g0197361 46.584 161 83 3 9 167 10 169 2.20e-45 164
Msa1329190 MtrunA17_Chr4g0038751 49.007 151 68 3 9 156 17 161 1.72e-44 155
Msa1329190 MtrunA17_Chr8g0385991 46.471 170 77 6 2 162 9 173 7.30e-43 149
Msa1329190 MtrunA17_Chr3g0131911 41.618 173 84 3 2 162 9 176 7.23e-40 141
Msa1329190 MtrunA17_Chr3g0113001 52.632 114 40 3 52 157 10 117 8.45e-36 132
Msa1329190 MtrunA17_Chr8g0345671 44.937 158 76 6 2 153 3 155 2.88e-35 133
Msa1329190 MtrunA17_Chr8g0345691 43.871 155 79 5 3 154 8 157 1.10e-34 132
Msa1329190 MtrunA17_Chr4g0026141 45.113 133 64 4 8 134 6 135 1.11e-33 125
Msa1329190 MtrunA17_Chr2g0321631 41.509 159 78 7 8 154 5 160 5.59e-32 120
Msa1329190 MtrunA17_Chr4g0050701 40.000 160 75 4 7 156 11 159 1.41e-31 118
Msa1329190 MtrunA17_Chr3g0113031 55.914 93 31 2 73 157 3 93 4.14e-30 116
Msa1329190 MtrunA17_Chr2g0321741 40.580 138 70 3 21 153 1 131 4.15e-30 118
Msa1329190 MtrunA17_Chr7g0266701 36.420 162 92 4 6 156 3 164 1.66e-29 114
Msa1329190 MtrunA17_Chr8g0345711 43.077 130 69 4 7 133 12 139 7.14e-28 107
Msa1329190 MtrunA17_Chr8g0345701 41.333 150 67 6 1 133 1 146 1.66e-26 103
Msa1329190 MtrunA17_Chr8g0345731 36.129 155 88 5 7 156 24 172 1.19e-23 96.3
Msa1329190 MtrunA17_Chr7g0243371 46.154 91 46 2 51 138 4 94 1.08e-21 89.4
Msa1329190 MtrunA17_Chr8g0345721 36.905 168 69 7 10 142 38 203 1.43e-21 91.7
Msa1329190 MtrunA17_Chr8g0345741 41.176 119 65 4 18 133 2 118 3.27e-20 86.3
Msa1329190 MtrunA17_Chr8g0384351 33.133 166 86 7 7 172 10 150 1.16e-17 80.1
Msa1329190 MtrunA17_Chr3g0130321 31.765 170 91 6 1 155 1 160 5.66e-15 73.2
Msa1329190 MtrunA17_Chr7g0251651 28.750 160 105 6 7 163 18 171 3.61e-14 70.5
Msa1329190 MtrunA17_Chr2g0282871 28.655 171 98 7 1 154 47 210 3.28e-12 66.6
Msa1329190 MtrunA17_Chr7g0274971 28.947 152 99 6 13 158 11 159 5.48e-12 64.7
Msa1329190 MtrunA17_Chr4g0040541 28.902 173 96 7 1 154 42 206 5.00e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329190 AT1G12260.1 55.097 412 124 10 1 368 1 395 2.03e-145 417
Msa1329190 AT1G12260.2 56.032 373 128 10 1 368 1 342 5.84e-137 394
Msa1329190 AT1G62700.1 52.580 407 139 13 1 366 1 394 4.07e-129 376
Msa1329190 AT1G62700.2 52.580 407 139 13 1 366 1 394 4.07e-129 376
Msa1329190 AT4G36160.2 49.051 369 139 9 7 348 14 360 4.27e-108 322
Msa1329190 AT4G36160.1 49.051 369 139 9 7 348 10 356 9.16e-108 321
Msa1329190 AT4G36160.3 49.051 369 139 9 7 348 10 356 9.16e-108 321
Msa1329190 AT2G18060.3 52.484 322 121 7 7 314 9 312 8.54e-107 318
Msa1329190 AT2G18060.1 52.484 322 121 7 7 314 9 312 8.54e-107 318
Msa1329190 AT5G62380.2 46.761 355 151 6 1 342 1 330 1.44e-101 304
Msa1329190 AT5G62380.1 46.761 355 151 6 1 342 1 330 1.44e-101 304
Msa1329190 AT5G66300.1 50.804 311 104 6 7 304 12 286 7.23e-100 298
Msa1329190 AT2G46770.1 50.000 320 104 9 1 304 10 289 1.65e-90 276
Msa1329190 AT1G71930.2 44.025 318 128 5 5 311 7 285 1.91e-84 259
Msa1329190 AT1G71930.1 44.025 318 128 5 5 311 7 285 1.91e-84 259
Msa1329190 AT3G61910.1 46.082 319 108 7 1 304 5 274 2.66e-84 259
Msa1329190 AT1G32770.1 56.538 260 74 9 1 234 10 256 2.72e-84 260
Msa1329190 AT1G33280.1 72.185 151 41 1 7 157 8 157 3.79e-78 243
Msa1329190 AT4G10350.1 71.242 153 42 1 7 157 9 161 1.07e-77 243
Msa1329190 AT1G79580.3 73.377 154 35 3 7 157 17 167 1.54e-77 243
Msa1329190 AT1G79580.5 73.377 154 35 3 7 157 17 167 1.54e-77 243
Msa1329190 AT1G79580.4 73.377 154 35 3 7 157 17 167 1.54e-77 243
Msa1329190 AT1G79580.2 73.377 154 35 3 7 157 17 167 1.54e-77 243
Msa1329190 AT1G79580.1 73.377 154 35 3 7 157 17 167 1.54e-77 243
Msa1329190 AT3G18400.1 62.092 153 52 3 6 156 4 152 2.24e-63 205
Msa1329190 AT3G17730.1 55.263 152 65 2 7 156 6 156 1.96e-59 192
Msa1329190 AT2G24430.2 57.325 157 61 3 7 160 16 169 3.26e-59 194
Msa1329190 AT2G24430.1 57.325 157 61 3 7 160 16 169 3.26e-59 194
Msa1329190 AT5G61430.1 58.710 155 55 3 7 156 16 166 7.09e-59 194
Msa1329190 AT3G10490.1 46.193 197 97 4 5 195 25 218 3.54e-58 189
Msa1329190 AT1G69490.1 54.717 159 63 2 5 157 7 162 3.72e-58 190
Msa1329190 AT5G39610.1 58.974 156 55 3 7 157 20 171 3.94e-58 191
Msa1329190 AT5G07680.2 57.143 154 59 2 7 156 3 153 1.40e-57 190
Msa1329190 AT5G07680.1 57.143 154 59 2 7 156 17 167 2.46e-57 190
Msa1329190 AT5G17260.1 49.398 166 80 2 7 169 6 170 3.03e-57 194
Msa1329190 AT1G65910.1 55.195 154 62 3 7 156 6 156 3.46e-57 197
Msa1329190 AT3G10480.1 47.208 197 95 4 5 195 25 218 7.39e-57 192
Msa1329190 AT3G10490.2 47.150 193 93 4 9 195 29 218 9.47e-57 192
Msa1329190 AT1G54330.1 57.237 152 63 2 7 158 6 155 1.38e-56 187
Msa1329190 AT3G03200.1 53.595 153 67 2 7 156 6 157 2.63e-56 191
Msa1329190 AT1G76420.1 56.863 153 60 3 7 156 22 171 5.96e-56 186
Msa1329190 AT3G04070.2 44.928 207 83 5 5 186 8 208 8.41e-56 186
Msa1329190 AT3G10480.2 47.716 197 93 5 5 195 25 217 8.53e-56 189
Msa1329190 AT3G29035.1 57.692 156 57 3 7 157 24 175 1.84e-55 184
Msa1329190 AT5G18270.1 53.939 165 66 4 7 164 21 182 3.22e-55 184
Msa1329190 AT3G04060.1 45.413 218 97 8 7 208 20 231 4.41e-55 184
Msa1329190 AT5G53950.1 56.688 157 59 3 6 156 16 169 4.62e-55 185
Msa1329190 AT5G18270.2 53.939 165 66 4 7 164 21 182 5.21e-55 184
Msa1329190 AT3G12977.1 55.769 156 61 4 5 156 16 167 6.29e-55 182
Msa1329190 AT5G46590.1 54.487 156 66 3 5 156 4 158 1.47e-54 181
Msa1329190 AT3G15170.1 53.293 167 69 3 5 165 18 181 2.72e-54 181
Msa1329190 AT1G56010.2 52.147 163 69 3 5 161 17 176 1.00e-53 180
Msa1329190 AT5G04410.1 45.989 187 94 4 2 183 4 188 1.19e-52 183
Msa1329190 AT2G43000.1 39.286 252 121 6 9 255 20 244 3.38e-52 175
Msa1329190 AT5G63790.1 47.399 173 80 3 6 171 49 217 3.39e-52 176
Msa1329190 AT5G63790.2 47.399 173 80 3 6 171 59 227 4.28e-52 176
Msa1329190 AT4G27410.2 52.632 152 67 2 7 156 14 162 5.53e-52 175
Msa1329190 AT5G46590.2 59.091 132 52 2 5 135 4 134 1.03e-51 174
Msa1329190 AT3G04070.1 41.704 223 83 6 5 186 8 224 1.12e-51 176
Msa1329190 AT2G33480.2 51.316 152 68 1 6 157 14 159 1.51e-51 173
Msa1329190 AT1G33060.1 51.634 153 69 3 7 156 24 174 1.95e-51 181
Msa1329190 AT1G33060.2 51.634 153 69 3 7 156 24 174 1.99e-51 181
Msa1329190 AT3G10480.3 41.739 230 92 6 5 195 25 251 2.98e-51 179
Msa1329190 AT4G35580.1 51.282 156 73 2 3 156 5 159 3.30e-51 178
Msa1329190 AT2G33480.1 51.299 154 67 3 6 157 14 161 3.48e-51 172
Msa1329190 AT1G01720.1 46.746 169 80 3 1 163 1 165 3.66e-51 172
Msa1329190 AT4G35580.2 51.572 159 68 3 3 156 5 159 3.88e-51 179
Msa1329190 AT4G35580.3 51.572 159 68 3 3 156 5 159 3.97e-51 179
Msa1329190 AT5G08790.1 47.191 178 82 4 1 171 1 173 4.91e-51 172
Msa1329190 AT3G10500.1 43.979 191 99 4 2 186 4 192 7.09e-51 178
Msa1329190 AT5G39820.1 47.429 175 64 4 7 156 20 191 7.26e-51 173
Msa1329190 AT1G61110.1 47.904 167 67 4 6 156 15 177 1.43e-50 172
Msa1329190 AT3G15500.1 49.686 159 74 3 7 163 14 168 1.89e-50 171
Msa1329190 AT4G17980.1 50.633 158 71 3 5 156 4 160 3.84e-50 169
Msa1329190 AT1G77450.1 45.833 168 82 3 8 170 11 174 4.55e-50 169
Msa1329190 AT1G52890.1 46.746 169 83 3 7 173 14 177 9.31e-50 170
Msa1329190 AT4G27410.3 48.795 166 69 3 7 156 14 179 9.78e-50 169
Msa1329190 AT4G17980.2 50.633 158 71 3 5 156 4 160 1.02e-49 169
Msa1329190 AT1G32510.1 46.154 169 80 3 5 163 4 171 1.42e-49 168
Msa1329190 AT4G10350.2 71.296 108 29 1 52 157 7 114 1.89e-49 168
Msa1329190 AT4G28530.1 49.708 171 61 5 5 156 8 172 4.24e-49 169
Msa1329190 AT1G26870.1 45.833 168 75 3 9 163 18 182 8.09e-49 170
Msa1329190 AT2G18060.2 42.437 238 105 7 88 311 2 221 7.07e-48 164
Msa1329190 AT5G24590.2 49.367 158 76 4 3 157 9 165 6.06e-47 166
Msa1329190 AT5G13180.1 46.541 159 76 3 2 157 9 161 9.48e-47 160
Msa1329190 AT2G02450.2 47.020 151 76 2 7 156 51 198 2.87e-46 163
Msa1329190 AT2G02450.1 47.020 151 76 2 7 156 51 198 2.93e-46 162
Msa1329190 AT3G15510.1 45.402 174 75 4 11 168 21 190 7.20e-46 161
Msa1329190 AT1G34180.3 45.333 150 79 2 9 156 18 166 1.05e-44 160
Msa1329190 AT5G22290.1 45.098 153 78 2 5 157 19 165 1.09e-44 157
Msa1329190 AT2G27300.1 43.636 165 83 3 5 166 12 169 1.51e-44 157
Msa1329190 AT5G09330.5 41.667 192 102 6 5 189 4 192 1.73e-44 160
Msa1329190 AT5G09330.2 41.667 192 102 6 5 189 4 192 1.73e-44 160
Msa1329190 AT5G09330.4 41.667 192 102 6 5 189 4 192 1.73e-44 160
Msa1329190 AT5G09330.3 41.667 192 102 6 5 189 4 192 1.73e-44 160
Msa1329190 AT5G09330.1 41.667 192 102 6 5 189 4 192 1.73e-44 160
Msa1329190 AT1G34180.1 32.432 296 170 10 9 279 18 308 4.36e-44 160
Msa1329190 AT1G52880.1 47.619 168 69 4 11 163 21 184 4.41e-44 155
Msa1329190 AT3G49530.2 45.223 157 82 4 3 156 9 164 4.71e-44 157
Msa1329190 AT1G34190.1 43.750 176 88 6 9 177 18 189 6.88e-44 159
Msa1329190 AT5G64060.1 45.161 155 80 3 5 156 4 156 1.83e-43 154
Msa1329190 AT3G49530.1 45.223 157 82 4 3 156 9 164 1.97e-43 157
Msa1329190 AT2G17040.1 44.371 151 75 3 9 156 8 152 2.28e-43 152
Msa1329190 AT5G04395.1 47.682 151 66 3 5 142 26 176 1.77e-42 147
Msa1329190 AT1G34180.4 43.293 164 74 4 9 156 18 178 7.56e-42 152
Msa1329190 AT1G34180.2 31.935 310 165 12 9 279 18 320 2.02e-41 153
Msa1329190 AT3G12910.1 43.023 172 73 5 9 160 23 189 2.44e-41 147
Msa1329190 AT3G44290.2 41.139 158 83 4 9 163 16 166 1.16e-40 143
Msa1329190 AT3G44290.1 41.139 158 83 4 9 163 16 166 1.50e-39 143
Msa1329190 AT5G61430.2 59.813 107 34 3 55 156 1 103 2.85e-38 138
Msa1329190 AT3G12977.2 56.481 108 41 2 52 156 10 114 7.82e-37 133
Msa1329190 AT1G56010.1 58.824 102 37 1 65 161 8 109 1.14e-36 134
Msa1329190 AT1G32870.2 41.818 165 89 3 7 167 10 171 2.62e-35 135
Msa1329190 AT1G32870.1 41.818 165 89 3 7 167 10 171 3.24e-35 135
Msa1329190 AT1G32870.3 41.818 165 89 3 7 167 46 207 6.68e-35 135
Msa1329190 AT2G33480.3 51.961 102 47 2 58 157 3 104 2.65e-32 120
Msa1329190 AT5G22380.1 40.769 130 69 4 10 133 8 135 5.82e-27 107
Msa1329190 AT3G44350.2 33.714 175 100 8 10 175 8 175 9.88e-26 104
Msa1329190 AT3G44350.1 38.931 131 71 5 10 134 8 135 1.59e-25 101
Msa1329190 AT3G10490.4 42.857 119 60 3 83 195 2 118 2.45e-25 105
Msa1329190 AT3G10490.3 42.857 119 60 3 83 195 2 118 2.45e-25 105
Msa1329190 AT1G02230.1 45.802 131 62 6 8 133 4 130 3.06e-25 105
Msa1329190 AT4G01550.1 38.158 152 84 5 10 156 7 153 4.76e-25 106
Msa1329190 AT4G01520.1 35.762 151 88 5 8 153 5 151 4.92e-25 103
Msa1329190 AT3G04420.2 42.188 128 71 3 8 133 4 130 2.25e-24 101
Msa1329190 AT4G01540.4 36.242 149 86 5 10 153 7 151 4.26e-24 102
Msa1329190 AT1G02250.1 45.038 131 63 5 8 133 4 130 5.59e-24 102
Msa1329190 AT3G04420.1 42.188 128 71 3 8 133 4 130 6.22e-24 101
Msa1329190 AT4G01540.3 36.242 149 86 5 10 153 7 151 7.09e-24 102
Msa1329190 AT4G01540.2 36.242 149 86 5 10 153 7 151 1.16e-23 101
Msa1329190 AT5G64530.1 36.905 168 73 6 7 156 3 155 1.18e-23 97.1
Msa1329190 AT4G01540.1 36.242 149 86 5 10 153 7 151 1.36e-23 102
Msa1329190 AT5G64530.2 42.748 131 58 5 7 135 3 118 2.52e-23 95.5
Msa1329190 AT2G43000.2 33.333 189 97 5 72 255 2 166 6.70e-23 95.5
Msa1329190 AT4G28530.2 28.216 241 79 7 5 193 8 206 1.58e-21 94.4
Msa1329190 AT1G02220.1 40.310 129 71 4 7 133 3 127 1.60e-19 89.7
Msa1329190 AT3G56530.1 30.872 149 99 2 8 154 53 199 5.41e-19 87.0
Msa1329190 AT1G01010.1 31.053 190 104 9 10 187 6 180 8.59e-19 87.8
Msa1329190 AT5G50820.1 34.965 143 68 6 6 139 16 142 6.05e-18 81.6
Msa1329190 AT5G22290.2 44.928 69 34 1 89 157 2 66 3.66e-16 77.8
Msa1329190 AT3G55210.1 28.090 178 108 7 2 165 5 176 2.09e-14 73.2
Msa1329190 AT5G14000.1 27.273 165 112 3 1 163 9 167 1.92e-13 68.9
Msa1329190 AT5G14000.2 29.197 137 90 2 1 135 9 140 2.14e-13 67.8
Msa1329190 AT3G04430.1 34.328 134 71 6 13 133 6 135 3.53e-11 62.4
Msa1329190 AT1G28470.1 29.697 165 92 6 7 154 77 234 4.79e-11 63.5

Find 115 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATCTTCACTCACTTTA+TGG 0.109284 8_4:-47536562 Msa1329190:CDS
GCATATTAATATATAGTATT+TGG 0.147682 8_4:-47536235 Msa1329190:three_prime_UTR
AAGAGAAAAGATGATTTATT+AGG 0.185077 8_4:-47542225 Msa1329190:five_prime_UTR
AATATACTCAAAACAATTTC+TGG 0.230974 8_4:-47539972 Msa1329190:CDS
GGTGAGAATTGGTTCGGGTT+GGG 0.250402 8_4:+47536815 None:intergenic
CAAACAGAATTATGCAAAAT+AGG 0.259681 8_4:-47540115 Msa1329190:intron
CCTTTATCTATTGTTAAGTT+TGG 0.271628 8_4:+47542265 None:intergenic
TATATATGTAGGAACATTTC+CGG 0.273565 8_4:+47536045 None:intergenic
CAATCAGATTTCTGTCCATT+TGG 0.277247 8_4:+47539908 None:intergenic
TAAGTTTGGAGCTAGATTTC+AGG 0.284365 8_4:+47542279 None:intergenic
GCATGAGCATGATGATTATA+AGG 0.293277 8_4:+47536655 None:intergenic
GAGCAACAAAAGCAGGATTC+TGG 0.295790 8_4:-47540018 Msa1329190:CDS
TATTGCATTAATTCTAGTTC+TGG 0.299193 8_4:+47536760 None:intergenic
AATCAGATTTCTGTCCATTT+GGG 0.310097 8_4:+47539909 None:intergenic
GTGAGAATTGGTTCGGGTTG+GGG 0.323739 8_4:+47536816 None:intergenic
CGTCTTGAAACTAATCAAAA+TGG 0.327333 8_4:-47539869 Msa1329190:CDS
AGAGAAAAGATGATTTATTA+GGG 0.328786 8_4:-47542224 Msa1329190:five_prime_UTR
TATTAAAATTAAAATACATT+TGG 0.358715 8_4:+47536090 None:intergenic
ATGAACAGCTTACAGCATTA+AGG 0.362569 8_4:+47536151 None:intergenic
TAGGAGGGTGAGAATTGGTT+CGG 0.394916 8_4:+47536809 None:intergenic
ATATATGAACCTCTGGAGTC+TGG 0.395962 8_4:-47536128 Msa1329190:three_prime_UTR
ATGATCAATCACCATGTAAC+TGG 0.399685 8_4:-47536876 Msa1329190:CDS
CCAAACTTAACAATAGATAA+AGG 0.415115 8_4:-47542265 Msa1329190:five_prime_UTR
CATGAGCATGATGATTATAA+GGG 0.417661 8_4:+47536656 None:intergenic
ACTCAAAACAATTTCTGGTT+GGG 0.418569 8_4:-47539967 Msa1329190:CDS
CCAGAGTTCCATGTGGCAAC+TGG 0.420939 8_4:+47536297 None:intergenic
GGCAATCGATGATCAGTTGC+CGG 0.421864 8_4:-47536064 Msa1329190:three_prime_UTR
AGGAGGGTGAGAATTGGTTC+GGG 0.425538 8_4:+47536810 None:intergenic
GAGTGGTATGAAGTATAGTT+AGG 0.433410 8_4:+47536790 None:intergenic
GAAAACTAGCATCATGGTAT+TGG 0.436544 8_4:+47536725 None:intergenic
GGCTTTCAAGGTGTGGAAGT+TGG 0.437985 8_4:+47536701 None:intergenic
CGGGTTGGGGATTCAAGATC+TGG 0.439654 8_4:+47536829 None:intergenic
ATTTATTGTTATATATATGT+AGG 0.441656 8_4:+47536034 None:intergenic
GAAAAGCTTATCTCATGAAA+TGG 0.442191 8_4:+47542301 None:intergenic
CTATTCGTTCTAGTTCCTGT+TGG 0.449896 8_4:+47540040 None:intergenic
AAGTTAAATTGTTGTATCCT+CGG 0.452739 8_4:+47542036 None:intergenic
AAGAAGGATGGGTTGTATGC+AGG 0.452985 8_4:-47536942 Msa1329190:CDS
CTAGTTCTGGTTTGCATGAG+TGG 0.455930 8_4:+47536773 None:intergenic
TACTCAAAACAATTTCTGGT+TGG 0.456891 8_4:-47539968 Msa1329190:CDS
ATGAAATGGTGGCGCTAAAA+CGG 0.457017 8_4:+47542315 None:intergenic
ATAGTTAGGAGGGTGAGAAT+TGG 0.460967 8_4:+47536804 None:intergenic
ATCCACACTTGAATTCTACT+TGG 0.461676 8_4:-47541815 Msa1329190:five_prime_UTR
TGCATCCACACTTAATATCA+AGG 0.462463 8_4:-47541786 Msa1329190:intron
TAATCAAAATGGAATTTCTC+AGG 0.470538 8_4:-47539858 Msa1329190:intron
TTCTCTCCAACGAGAGGGAG+AGG 0.474187 8_4:+47542084 None:intergenic
AGTTAAATTGTTGTATCCTC+GGG 0.477142 8_4:+47542037 None:intergenic
AACTAGCATCATGGTATTGG+TGG 0.481901 8_4:+47536728 None:intergenic
ATGATGAACAAGTTACTGAT+TGG 0.483191 8_4:-47536519 Msa1329190:CDS
AGAAGGATGGGTTGTATGCA+GGG 0.483470 8_4:-47536941 Msa1329190:CDS
AAAGATAAGAAGTATCCAAC+AGG 0.484211 8_4:-47540055 Msa1329190:CDS
TACAAAGGACGTGCCCCAAA+TGG 0.485596 8_4:-47539923 Msa1329190:CDS
GCTTATTATGTACACCAACT+TGG 0.486124 8_4:+47536193 None:intergenic
ACGAATAGAGCAACAAAAGC+AGG 0.489114 8_4:-47540025 Msa1329190:CDS
CCAGTTGCCACATGGAACTC+TGG 0.492908 8_4:-47536297 Msa1329190:CDS
TCCCGAGAGGAGTACTGAAA+AGG 0.495443 8_4:+47542138 None:intergenic
TGGTATGAAGTATAGTTAGG+AGG 0.495788 8_4:+47536793 None:intergenic
ATTGAACCATGGGATCTTCA+AGG 0.495896 8_4:-47540379 Msa1329190:intron
GGTATGAAGTATAGTTAGGA+GGG 0.496460 8_4:+47536794 None:intergenic
ATGAAAGTGAAGGAAGGAAA+AGG 0.498702 8_4:+47542168 None:intergenic
TCAACAAGTTCTTCATCAGT+TGG 0.499544 8_4:+47540475 None:intergenic
AACTTGTTGATTACTACCTC+AGG 0.500136 8_4:-47540462 Msa1329190:CDS
CAAATGGACAGAAATCTGAT+TGG 0.510953 8_4:-47539907 Msa1329190:CDS
GTTGGATGAAAACGAAAGCC+TGG 0.518219 8_4:+47540493 None:intergenic
TATTGCTTTGTCTCTTCCTG+TGG 0.520396 8_4:+47539991 None:intergenic
GGGTGAGAATTGGTTCGGGT+TGG 0.520526 8_4:+47536814 None:intergenic
TGTTCATATATATGAACCTC+TGG 0.524534 8_4:-47536135 Msa1329190:three_prime_UTR
TCTCTATAAAATTGAACCAT+GGG 0.531197 8_4:-47540389 Msa1329190:CDS
TGATTACTACCTCAGGAAGA+AGG 0.532222 8_4:-47540455 Msa1329190:CDS
AACAGACAGGAAATGAAAAG+TGG 0.540578 8_4:+47542012 None:intergenic
GAAGAGATGAAAGTGAAGGA+AGG 0.540814 8_4:+47542162 None:intergenic
TTACCATGCTTATATATCTG+AGG 0.547268 8_4:-47541868 Msa1329190:five_prime_UTR
CACATGAAGAATAGCTGCAT+TGG 0.548314 8_4:+47536396 None:intergenic
ATCTCTATAAAATTGAACCA+TGG 0.552588 8_4:-47540390 Msa1329190:CDS
ACTAGCATCATGGTATTGGT+GGG 0.553019 8_4:+47536729 None:intergenic
GAAAAGGTAAGTTTCAAGAG+TGG 0.554530 8_4:+47542184 None:intergenic
CTCTCCAACGAGAGGGAGAG+GGG 0.557731 8_4:+47542086 None:intergenic
TATGGTGGTAACAGCAGTAA+TGG 0.564737 8_4:-47536544 Msa1329190:CDS
AGGATTTAGTGCTACAAACA+AGG 0.570577 8_4:-47541848 Msa1329190:five_prime_UTR
TAACTTGTACTGCAGGAAGA+AGG 0.571751 8_4:-47536958 Msa1329190:intron
CAATGCAGCTATTCTTCATG+TGG 0.572344 8_4:-47536395 Msa1329190:CDS
TTGTACTGCAGGAAGAAGGA+TGG 0.572577 8_4:-47536954 Msa1329190:intron
CACAAGGGGACAAAACAGAC+AGG 0.572681 8_4:+47541999 None:intergenic
ATCAGATTTCTGTCCATTTG+GGG 0.575645 8_4:+47539910 None:intergenic
AATAACCTTGATATTAAGTG+TGG 0.576631 8_4:+47541781 None:intergenic
GAAGTGATGAACAAAATGAC+TGG 0.576909 8_4:-47540093 Msa1329190:CDS
GCAGGATTCTGGAAAGCCAC+AGG 0.582522 8_4:-47540007 Msa1329190:CDS
AGGAGAAGAGATGAAAGTGA+AGG 0.582728 8_4:+47542158 None:intergenic
CCTTTGTTCTCTCCAACGAG+AGG 0.589394 8_4:+47542078 None:intergenic
GTTGGAGAAAACTAGCATCA+TGG 0.589690 8_4:+47536719 None:intergenic
TCTCTCCAACGAGAGGGAGA+GGG 0.591885 8_4:+47542085 None:intergenic
TTCTACCTCCAGTTGCCACA+TGG 0.595602 8_4:-47536305 Msa1329190:CDS
GGATTCAAGATCTGGCATGA+AGG 0.597988 8_4:+47536837 None:intergenic
CTTTGTTCTCTCCAACGAGA+GGG 0.605863 8_4:+47542079 None:intergenic
TGTACTGCAGGAAGAAGGAT+GGG 0.607538 8_4:-47536953 Msa1329190:intron
TGATCATCATACCAGTTACA+TGG 0.608098 8_4:+47536865 None:intergenic
TCGATACCTTGAAGATCCCA+TGG 0.613286 8_4:+47540373 None:intergenic
CTACTACTTCAAAACGATCG+TGG 0.616988 8_4:-47541919 Msa1329190:five_prime_UTR
TCTCCAACGAGAGGGAGAGG+GGG 0.622124 8_4:+47542087 None:intergenic
GAGTTCCATGTGGCAACTGG+AGG 0.627769 8_4:+47536300 None:intergenic
AATCTTCACTCACTTTATGG+TGG 0.628619 8_4:-47536559 Msa1329190:CDS
TGATGAGTATTGCTCCAAGT+TGG 0.635184 8_4:-47536207 Msa1329190:three_prime_UTR
AATCCTCAGATATATAAGCA+TGG 0.635473 8_4:+47541865 None:intergenic
AAGCTTATCTCATGAAATGG+TGG 0.636207 8_4:+47542304 None:intergenic
CTAGCATCATGGTATTGGTG+GGG 0.638906 8_4:+47536730 None:intergenic
TAGACGATACCTTCTTCCTG+AGG 0.649052 8_4:+47540446 None:intergenic
CCTCTCGTTGGAGAGAACAA+AGG 0.653372 8_4:-47542078 Msa1329190:five_prime_UTR
AAGAAAGGCAGAAAGACACA+AGG 0.658318 8_4:+47541983 None:intergenic
CGTTGGAGAGAACAAAGGAG+AGG 0.658962 8_4:-47542073 Msa1329190:five_prime_UTR
GAAAGGCAGAAAGACACAAG+GGG 0.665624 8_4:+47541985 None:intergenic
CTCCAAGTAGAATTCAAGTG+TGG 0.669661 8_4:+47541813 None:intergenic
AGAAAGGCAGAAAGACACAA+GGG 0.670147 8_4:+47541984 None:intergenic
GAGAGAGATCAGATCCCGAG+AGG 0.701888 8_4:+47542125 None:intergenic
TATATATATCCAGACTCCAG+AGG 0.705194 8_4:+47536119 None:intergenic
TTCACTTCCAGAGTTCCATG+TGG 0.729412 8_4:+47536290 None:intergenic
GGATGAAAACGAAAGCCTGG+AGG 0.739180 8_4:+47540496 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATAA+GGG + chr8_4:47538897-47538916 None:intergenic 0.0%
!! TAATAATAATAATAATAATA+AGG + chr8_4:47538898-47538917 None:intergenic 0.0%
!! TTATTATTATTATAAAATTT+AGG - chr8_4:47538981-47539000 Msa1329190:intron 0.0%
!! TATTATTATTATAAAATTTA+GGG - chr8_4:47538982-47539001 Msa1329190:intron 0.0%
!!! TTTTTTTTTTTTTAATAGCT+AGG - chr8_4:47536985-47537004 Msa1329190:intron 10.0%
!! AAAAAATATTAAATATGGAA+AGG + chr8_4:47537093-47537112 None:intergenic 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr8_4:47537552-47537571 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + chr8_4:47537553-47537572 None:intergenic 10.0%
!! TAAATGAAAAAATAATAATG+TGG - chr8_4:47537703-47537722 Msa1329190:intron 10.0%
!! TTTATTAAATGATAGTTATA+AGG + chr8_4:47539492-47539511 None:intergenic 10.0%
!!! ATATATGTTAATTATGTTTT+CGG - chr8_4:47539514-47539533 Msa1329190:intron 10.0%
!! TTGTAAAAATAAAAAAATCA+TGG + chr8_4:47539675-47539694 None:intergenic 10.0%
!! TATTTAGTAAATATATTTCA+AGG + chr8_4:47539714-47539733 None:intergenic 10.0%
!! AGAGTTATTATAAATATTAA+GGG + chr8_4:47541196-47541215 None:intergenic 10.0%
!! AAGAGTTATTATAAATATTA+AGG + chr8_4:47541197-47541216 None:intergenic 10.0%
!!! TGTATTTTAATTTTAATACT+AGG - chr8_4:47542289-47542308 Msa1329190:five_prime_UTR 10.0%
!! ATTTATTGTTATATATATGT+AGG + chr8_4:47542343-47542362 None:intergenic 10.0%
!! TAAAAAAAAAAAAAAACTGG+TGG + chr8_4:47536979-47536998 None:intergenic 15.0%
!!! ACTTTTTACAATGTAATTAT+GGG + chr8_4:47537242-47537261 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr8_4:47537487-47537506 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr8_4:47537488-47537507 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr8_4:47537551-47537570 None:intergenic 15.0%
!! AAAATTGTGTCAATTAAATT+GGG - chr8_4:47537588-47537607 Msa1329190:intron 15.0%
!!! ATGATTAATTTTCAACAATA+AGG + chr8_4:47537673-47537692 None:intergenic 15.0%
!! AAAAAAATAATTAACAAAGG+AGG + chr8_4:47537801-47537820 None:intergenic 15.0%
!!! AAAAAAATTCTGAGATAATA+TGG + chr8_4:47538062-47538081 None:intergenic 15.0%
!! TGAAAACAAAAAATTATACT+AGG - chr8_4:47538084-47538103 Msa1329190:intron 15.0%
!!! TAATAAAATGTTACATCTTT+TGG - chr8_4:47538832-47538851 Msa1329190:intron 15.0%
!!! ATAAAATTTAGGGTTAAATA+AGG - chr8_4:47538992-47539011 Msa1329190:intron 15.0%
!! CAATATTATTTATAATGATG+AGG - chr8_4:47539395-47539414 Msa1329190:intron 15.0%
!!! TTACTTATTTTGATAAGAAA+TGG - chr8_4:47539627-47539646 Msa1329190:intron 15.0%
!! AAAAATTACGTATTAATTAG+CGG + chr8_4:47539751-47539770 None:intergenic 15.0%
!!! TCTCTAAAATTATCTTTTAT+TGG + chr8_4:47540011-47540030 None:intergenic 15.0%
!! AAAAAAAAATCTTATGTGAT+CGG - chr8_4:47540237-47540256 Msa1329190:intron 15.0%
!!! TTGAAACTTTTAAAACTTAA+AGG + chr8_4:47540427-47540446 None:intergenic 15.0%
!!! AAAAATTTTGTCAAACTAAA+AGG - chr8_4:47540657-47540676 Msa1329190:intron 15.0%
!!! TAATAGATTGAGTAATTTTT+GGG + chr8_4:47541697-47541716 None:intergenic 15.0%
!!! ATAATAGATTGAGTAATTTT+TGG + chr8_4:47541698-47541717 None:intergenic 15.0%
!! GCATATTAATATATAGTATT+TGG - chr8_4:47542139-47542158 Msa1329190:five_prime_UTR 15.0%
!! AAGAGAAAAGATGATTTATT+AGG - chr8_4:47536149-47536168 Msa1329190:three_prime_UTR 20.0%
!! AGAGAAAAGATGATTTATTA+GGG - chr8_4:47536150-47536169 Msa1329190:three_prime_UTR 20.0%
!! CTTGATCTAGTATATTATAT+GGG - chr8_4:47536663-47536682 Msa1329190:CDS 20.0%
!! TAATATAAATACCAGAATTG+TGG - chr8_4:47536745-47536764 Msa1329190:CDS 20.0%
!!! TTATGATCAACTTATTTTGT+AGG - chr8_4:47537150-47537169 Msa1329190:intron 20.0%
!!! CTTTTTACAATGTAATTATG+GGG + chr8_4:47537241-47537260 None:intergenic 20.0%
!!! CACTTTTTACAATGTAATTA+TGG + chr8_4:47537243-47537262 None:intergenic 20.0%
!!! ATTGATTCATATTTCCTTAA+AGG + chr8_4:47537307-47537326 None:intergenic 20.0%
!! ATATGAATCAATGTTTCATA+AGG - chr8_4:47537315-47537334 Msa1329190:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr8_4:47537418-47537437 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr8_4:47537455-47537474 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + chr8_4:47537528-47537547 None:intergenic 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG - chr8_4:47537587-47537606 Msa1329190:intron 20.0%
!! CTTATAACAAAAGAAAAAGA+AGG + chr8_4:47537771-47537790 None:intergenic 20.0%
!!! TTATTTTTTTTTATGAGTGC+AGG - chr8_4:47537811-47537830 Msa1329190:intron 20.0%
!!! ATAATATGGATTGATTGTTA+AGG + chr8_4:47538048-47538067 None:intergenic 20.0%
!! AATATACTCAAAACAATTTC+TGG - chr8_4:47538402-47538421 Msa1329190:intron 20.0%
!! ATAAAAAAGCAAAAAGAAGA+AGG + chr8_4:47538549-47538568 None:intergenic 20.0%
!!! TTCTTCTTTTTGCTTTTTTA+TGG - chr8_4:47538548-47538567 Msa1329190:intron 20.0%
!! AGACTAAATCTAAATCATTT+AGG - chr8_4:47538658-47538677 Msa1329190:intron 20.0%
!! AACACAAATATAAATCGTTT+AGG + chr8_4:47538777-47538796 None:intergenic 20.0%
!! ATATGTTTGCAAAATTTCAA+AGG + chr8_4:47539127-47539146 None:intergenic 20.0%
!!! AATTTTGCAAACATATTTAG+TGG - chr8_4:47539131-47539150 Msa1329190:intron 20.0%
!!! TCTAGCAATTTTTTTTAACA+AGG - chr8_4:47539168-47539187 Msa1329190:intron 20.0%
!! AAATTTATTCAAAAACGTGA+AGG - chr8_4:47539293-47539312 Msa1329190:intron 20.0%
!! AATTTATTCAAAAACGTGAA+GGG - chr8_4:47539294-47539313 Msa1329190:intron 20.0%
!! AAATCTATAACTTCAGATAA+AGG - chr8_4:47539805-47539824 Msa1329190:intron 20.0%
!!! ATCACTACTTTTAGATAATA+AGG + chr8_4:47539848-47539867 None:intergenic 20.0%
!! ATTTCCATAAATTTGTATTC+TGG + chr8_4:47540034-47540053 None:intergenic 20.0%
!! GAAATAGTTTATCAACTAAA+AGG + chr8_4:47540456-47540475 None:intergenic 20.0%
!!! CCTATTTTAAACTTTTGAAA+CGG + chr8_4:47540486-47540505 None:intergenic 20.0%
!! AAGTTTCAAAAGTTTCAAAT+AGG + chr8_4:47540565-47540584 None:intergenic 20.0%
!!! TTGAAACTTTTGAAACTTAA+AGG - chr8_4:47540567-47540586 Msa1329190:intron 20.0%
!! ATGGAAGAAATGAAAAATAT+AGG + chr8_4:47540701-47540720 None:intergenic 20.0%
!!! TTTTTCATTTCTTCCATATT+AGG - chr8_4:47540704-47540723 Msa1329190:intron 20.0%
!! AAAACAAAATCATCCTAATA+TGG + chr8_4:47540720-47540739 None:intergenic 20.0%
!! TAGACTATATTTAAGAGTTT+AGG + chr8_4:47540825-47540844 None:intergenic 20.0%
!!! TCTTATCTATCTTTTTCTAT+TGG + chr8_4:47540869-47540888 None:intergenic 20.0%
!! AATATATTGTTGAAAGATTG+CGG + chr8_4:47541009-47541028 None:intergenic 20.0%
!! CAAGTTATAATAGTTATCAA+TGG + chr8_4:47541403-47541422 None:intergenic 20.0%
! CCTTTATCTATTGTTAAGTT+TGG + chr8_4:47536112-47536131 None:intergenic 25.0%
! CCAAACTTAACAATAGATAA+AGG - chr8_4:47536109-47536128 Msa1329190:three_prime_UTR 25.0%
! AAGTTAAATTGTTGTATCCT+CGG + chr8_4:47536341-47536360 None:intergenic 25.0%
! AATAACCTTGATATTAAGTG+TGG + chr8_4:47536596-47536615 None:intergenic 25.0%
! GCTTGATCTAGTATATTATA+TGG - chr8_4:47536662-47536681 Msa1329190:CDS 25.0%
! TCTAGTATATTATATGGGTT+TGG - chr8_4:47536668-47536687 Msa1329190:CDS 25.0%
! AAAAAAAAAAACTGGTGGAA+AGG + chr8_4:47536974-47536993 None:intergenic 25.0%
! ATGTTTAAACGTGATTTACT+AGG - chr8_4:47537121-47537140 Msa1329190:intron 25.0%
!! TAAAGGAGTATAACTAAACT+AGG + chr8_4:47537290-47537309 None:intergenic 25.0%
! AGTTTAGTTATACTCCTTTA+AGG - chr8_4:47537290-47537309 Msa1329190:intron 25.0%
! TGTTTCATAAGGTAAAGTTA+TGG - chr8_4:47537326-47537345 Msa1329190:intron 25.0%
! GTTTCATAAGGTAAAGTTAT+GGG - chr8_4:47537327-47537346 Msa1329190:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr8_4:47537419-47537438 None:intergenic 25.0%
!!! TGAAATGGATCAGTTATTTT+GGG + chr8_4:47537440-47537459 None:intergenic 25.0%
!! TTGAAATGGATCAGTTATTT+TGG + chr8_4:47537441-47537460 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr8_4:47537529-47537548 None:intergenic 25.0%
! ATCTCTATAAAATTGAACCA+TGG - chr8_4:47537984-47538003 Msa1329190:intron 25.0%
! TCTCTATAAAATTGAACCAT+GGG - chr8_4:47537985-47538004 Msa1329190:intron 25.0%
!! AAAATTATACTAGGAGTACA+AGG - chr8_4:47538093-47538112 Msa1329190:intron 25.0%
! CAAACAGAATTATGCAAAAT+AGG - chr8_4:47538259-47538278 Msa1329190:intron 25.0%
!! AAGACTCTAGTATTTTACAA+AGG - chr8_4:47538436-47538455 Msa1329190:intron 25.0%
! TAATCAAAATGGAATTTCTC+AGG - chr8_4:47538516-47538535 Msa1329190:intron 25.0%
! ATTCTCATACAAATACAAGA+AGG - chr8_4:47538682-47538701 Msa1329190:intron 25.0%
! AAAAAATCGGTACTAAAGAT+GGG + chr8_4:47538866-47538885 None:intergenic 25.0%
!!! TTGTTTTTAAGTCAACTCAT+GGG + chr8_4:47539322-47539341 None:intergenic 25.0%
!!! AAGTTGTGATGAAAAGTATT+CGG - chr8_4:47539349-47539368 Msa1329190:intron 25.0%
! CAAAATAAGTAAAATGTACG+TGG + chr8_4:47539619-47539638 None:intergenic 25.0%
! AAAATAAAAAAATCATGGCG+TGG + chr8_4:47539670-47539689 None:intergenic 25.0%
! TGCAATGAAATACTTGAATA+TGG + chr8_4:47540096-47540115 None:intergenic 25.0%
! AAAAATGCACACATATAACT+CGG + chr8_4:47540204-47540223 None:intergenic 25.0%
!!! TTTTTTTGCATCCAACTTAA+AGG + chr8_4:47540394-47540413 None:intergenic 25.0%
!! CCGTTTCAAAAGTTTAAAAT+AGG - chr8_4:47540483-47540502 Msa1329190:CDS 25.0%
!! CCTTTAAGTTTCAAACTAAA+AGG + chr8_4:47540510-47540529 None:intergenic 25.0%
!!! CCTTTTAGTTTGAAACTTAA+AGG - chr8_4:47540507-47540526 Msa1329190:CDS 25.0%
! AAGTTTCGAAAGTTTCAATT+AGG + chr8_4:47540624-47540643 None:intergenic 25.0%
! TTGAAACTTTCGAAACTTAA+AGG - chr8_4:47540626-47540645 Msa1329190:intron 25.0%
!! TATAGGTCAAATATCACTTT+TGG + chr8_4:47540684-47540703 None:intergenic 25.0%
! TATATTTAAGAGTTTAGGAG+AGG + chr8_4:47540820-47540839 None:intergenic 25.0%
!!! ATTTGATGCATTTTTGTTGT+TGG - chr8_4:47540909-47540928 Msa1329190:intron 25.0%
!!! TTTGATGCATTTTTGTTGTT+GGG - chr8_4:47540910-47540929 Msa1329190:intron 25.0%
! ACACGCAATAAAATTTATTG+TGG - chr8_4:47540962-47540981 Msa1329190:intron 25.0%
!!! TATTGCATTAATTCTAGTTC+TGG + chr8_4:47541617-47541636 None:intergenic 25.0%
! TATATATGTAGGAACATTTC+CGG + chr8_4:47542332-47542351 None:intergenic 25.0%
GAAAAGCTTATCTCATGAAA+TGG + chr8_4:47536076-47536095 None:intergenic 30.0%
AGTTAAATTGTTGTATCCTC+GGG + chr8_4:47536340-47536359 None:intergenic 30.0%
AAAAAAGCAGCACTAAAGAA+AGG + chr8_4:47536409-47536428 None:intergenic 30.0%
TTACCATGCTTATATATCTG+AGG - chr8_4:47536506-47536525 Msa1329190:CDS 30.0%
AATCCTCAGATATATAAGCA+TGG + chr8_4:47536512-47536531 None:intergenic 30.0%
ACAGTAAAGAAGAGAAACTA+AGG + chr8_4:47536694-47536713 None:intergenic 30.0%
TTAATGATCATCCACAATTC+TGG + chr8_4:47536759-47536778 None:intergenic 30.0%
!! CCTTTAGTTGTCTTTAGTTT+TGG + chr8_4:47536829-47536848 None:intergenic 30.0%
CCAAAACTAAAGACAACTAA+AGG - chr8_4:47536826-47536845 Msa1329190:CDS 30.0%
! AAATAGTTAGCTGTTGACTA+AGG + chr8_4:47536864-47536883 None:intergenic 30.0%
ACAAGACTTTGATCTATGTT+CGG - chr8_4:47536920-47536939 Msa1329190:CDS 30.0%
TTTACAATGTAATTATGGGG+AGG + chr8_4:47537238-47537257 None:intergenic 30.0%
AGGTTACAAAACAAAGTAGA+GGG + chr8_4:47537270-47537289 None:intergenic 30.0%
TAGGTTACAAAACAAAGTAG+AGG + chr8_4:47537271-47537290 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr8_4:47537544-47537563 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG - chr8_4:47537592-47537611 Msa1329190:intron 30.0%
!! ACGGAGGTAGTATTTTTATT+TGG - chr8_4:47537611-47537630 Msa1329190:intron 30.0%
!! GAGGTAGTATTTTTATTTGG+AGG - chr8_4:47537614-47537633 Msa1329190:intron 30.0%
!! AGTATTTTTATTTGGAGGAG+TGG - chr8_4:47537619-47537638 Msa1329190:intron 30.0%
!! GATAACACAACATTTGCTAT+TGG - chr8_4:47538226-47538245 Msa1329190:intron 30.0%
!! AAAGATAAGAAGTATCCAAC+AGG - chr8_4:47538319-47538338 Msa1329190:intron 30.0%
!! TACTCAAAACAATTTCTGGT+TGG - chr8_4:47538406-47538425 Msa1329190:intron 30.0%
!! ACTCAAAACAATTTCTGGTT+GGG - chr8_4:47538407-47538426 Msa1329190:intron 30.0%
AATCAGATTTCTGTCCATTT+GGG + chr8_4:47538468-47538487 None:intergenic 30.0%
CGTCTTGAAACTAATCAAAA+TGG - chr8_4:47538505-47538524 Msa1329190:intron 30.0%
!!! ACCATTTTGCTTTAAGAACA+AGG - chr8_4:47538621-47538640 Msa1329190:intron 30.0%
GAAAAAATCGGTACTAAAGA+TGG + chr8_4:47538867-47538886 None:intergenic 30.0%
AAGGGAAGAGATGAAAAAAT+CGG + chr8_4:47538879-47538898 None:intergenic 30.0%
!! CAACATTTAGGTTTTGTAGA+GGG + chr8_4:47539058-47539077 None:intergenic 30.0%
!! ACAACATTTAGGTTTTGTAG+AGG + chr8_4:47539059-47539078 None:intergenic 30.0%
ATATGAATCAAAAGTCGTGA+CGG + chr8_4:47539082-47539101 None:intergenic 30.0%
!!! CTTGTTTTTAAGTCAACTCA+TGG + chr8_4:47539323-47539342 None:intergenic 30.0%
! CGTGGAGTAAAATTGATAAT+TGG + chr8_4:47539601-47539620 None:intergenic 30.0%
TCACATATTCTTCATACGTT+TGG + chr8_4:47539906-47539925 None:intergenic 30.0%
!!! TTGCATTAGTTTTATGCAGT+CGG - chr8_4:47540111-47540130 Msa1329190:CDS 30.0%
AACATTATCAGTTGAGTTTG+CGG + chr8_4:47540142-47540161 None:intergenic 30.0%
AAAATGCACACATATAACTC+GGG + chr8_4:47540203-47540222 None:intergenic 30.0%
AAAATCTTATGTGATCGGTT+TGG - chr8_4:47540242-47540261 Msa1329190:intron 30.0%
!!! GTCAATGCTGTTTTTGTTTT+TGG + chr8_4:47540300-47540319 None:intergenic 30.0%
CTCAAGTTAATCCTTTAAGT+TGG - chr8_4:47540380-47540399 Msa1329190:CDS 30.0%
!!! TTAAACTTTTGAAACGGTGA+TGG + chr8_4:47540480-47540499 None:intergenic 30.0%
TGAAACTTAAAGGACTAACT+TGG - chr8_4:47540517-47540536 Msa1329190:CDS 30.0%
TGGGAACAAAAAACAATAAG+AGG - chr8_4:47540929-47540948 Msa1329190:intron 30.0%
ATTGCGGATATAAGTATGTA+GGG + chr8_4:47540993-47541012 None:intergenic 30.0%
!!! TTTTGGCTTGAAAATTCCAA+CGG + chr8_4:47541046-47541065 None:intergenic 30.0%
! GTTCATAGGATTTGCAATTT+TGG + chr8_4:47541063-47541082 None:intergenic 30.0%
GAGTTAAAATCGTAGTTCAT+AGG + chr8_4:47541077-47541096 None:intergenic 30.0%
!!! CCTTTTGAGATATGTATTGA+TGG + chr8_4:47541139-47541158 None:intergenic 30.0%
CCATCAATACATATCTCAAA+AGG - chr8_4:47541136-47541155 Msa1329190:intron 30.0%
TCAAAAGGTTATAATCGATG+TGG - chr8_4:47541151-47541170 Msa1329190:intron 30.0%
TCAAATTAGACATTACGTTC+AGG + chr8_4:47541241-47541260 None:intergenic 30.0%
!! TGTGTATACTTTCTGCTTTT+AGG - chr8_4:47541313-47541332 Msa1329190:intron 30.0%
! ACTATTATAACTTGTACTGC+AGG - chr8_4:47541409-47541428 Msa1329190:intron 30.0%
CATGAGCATGATGATTATAA+GGG + chr8_4:47541721-47541740 None:intergenic 30.0%
CAAAATCTTCACTCACTTTA+TGG - chr8_4:47541812-47541831 Msa1329190:five_prime_UTR 30.0%
ATGATGAACAAGTTACTGAT+TGG - chr8_4:47541855-47541874 Msa1329190:five_prime_UTR 30.0%
! CTCAGAAACATCATTCTTTT+TGG + chr8_4:47542035-47542054 None:intergenic 30.0%
! CAAAAAGAATGATGTTTCTG+AGG - chr8_4:47542033-47542052 Msa1329190:five_prime_UTR 30.0%
TGTTCATATATATGAACCTC+TGG - chr8_4:47542239-47542258 Msa1329190:five_prime_UTR 30.0%
AAGCTTATCTCATGAAATGG+TGG + chr8_4:47536073-47536092 None:intergenic 35.0%
! TAAGTTTGGAGCTAGATTTC+AGG + chr8_4:47536098-47536117 None:intergenic 35.0%
GAAAAGGTAAGTTTCAAGAG+TGG + chr8_4:47536193-47536212 None:intergenic 35.0%
ATGAAAGTGAAGGAAGGAAA+AGG + chr8_4:47536209-47536228 None:intergenic 35.0%
AACAGACAGGAAATGAAAAG+TGG + chr8_4:47536365-47536384 None:intergenic 35.0%
!!! GCTTTTTTGTCTGTTTCTGT+TGG - chr8_4:47536421-47536440 Msa1329190:CDS 35.0%
!!! ATCGTTTTGAAGTAGTAGCT+TGG + chr8_4:47536453-47536472 None:intergenic 35.0%
AGGATTTAGTGCTACAAACA+AGG - chr8_4:47536526-47536545 Msa1329190:CDS 35.0%
ATCCACACTTGAATTCTACT+TGG - chr8_4:47536559-47536578 Msa1329190:CDS 35.0%
TGCATCCACACTTAATATCA+AGG - chr8_4:47536588-47536607 Msa1329190:CDS 35.0%
GGCATGAAAAGCTAAATGTT+TGG - chr8_4:47537171-47537190 Msa1329190:intron 35.0%
AATGTAATTATGGGGAGGAA+GGG + chr8_4:47537233-47537252 None:intergenic 35.0%
GTTACAAAACAAAGTAGAGG+GGG + chr8_4:47537268-47537287 None:intergenic 35.0%
GGTTACAAAACAAAGTAGAG+GGG + chr8_4:47537269-47537288 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr8_4:47537405-47537424 None:intergenic 35.0%
!!! TGCAGGTTTTAATTCTTCTG+AGG - chr8_4:47537828-47537847 Msa1329190:intron 35.0%
!!! AGGTTTTAATTCTTCTGAGG+TGG - chr8_4:47537831-47537850 Msa1329190:intron 35.0%
TCAACAAGTTCTTCATCAGT+TGG + chr8_4:47537902-47537921 None:intergenic 35.0%
!! AACTTGTTGATTACTACCTC+AGG - chr8_4:47537912-47537931 Msa1329190:intron 35.0%
GAAGTGATGAACAAAATGAC+TGG - chr8_4:47538281-47538300 Msa1329190:intron 35.0%
ATCAGATTTCTGTCCATTTG+GGG + chr8_4:47538467-47538486 None:intergenic 35.0%
CAATCAGATTTCTGTCCATT+TGG + chr8_4:47538469-47538488 None:intergenic 35.0%
CAAATGGACAGAAATCTGAT+TGG - chr8_4:47538467-47538486 Msa1329190:intron 35.0%
GCAAAATGGTACATATCTAG+AGG + chr8_4:47538611-47538630 None:intergenic 35.0%
! GCCTTGTTCTTAAAGCAAAA+TGG + chr8_4:47538625-47538644 None:intergenic 35.0%
!! TTGTGATGAAAAGTATTCGG+AGG - chr8_4:47539352-47539371 Msa1329190:intron 35.0%
TTTAAGAGTTTAGGAGAGGA+GGG + chr8_4:47540816-47540835 None:intergenic 35.0%
ATTTAAGAGTTTAGGAGAGG+AGG + chr8_4:47540817-47540836 None:intergenic 35.0%
GATTGCGGATATAAGTATGT+AGG + chr8_4:47540994-47541013 None:intergenic 35.0%
ATGGAACGCATAGATATCAA+TGG + chr8_4:47541384-47541403 None:intergenic 35.0%
ATGATCAATCACCATGTAAC+TGG - chr8_4:47541498-47541517 Msa1329190:intron 35.0%
TGATCATCATACCAGTTACA+TGG + chr8_4:47541512-47541531 None:intergenic 35.0%
GGTATGAAGTATAGTTAGGA+GGG + chr8_4:47541583-47541602 None:intergenic 35.0%
TGGTATGAAGTATAGTTAGG+AGG + chr8_4:47541584-47541603 None:intergenic 35.0%
GAGTGGTATGAAGTATAGTT+AGG + chr8_4:47541587-47541606 None:intergenic 35.0%
GAAAACTAGCATCATGGTAT+TGG + chr8_4:47541652-47541671 None:intergenic 35.0%
!! GAGTAATTTTTGGGCTTTCA+AGG + chr8_4:47541688-47541707 None:intergenic 35.0%
GCATGAGCATGATGATTATA+AGG + chr8_4:47541722-47541741 None:intergenic 35.0%
! GTGAGTGAAGATTTTGTTGA+TGG + chr8_4:47541808-47541827 None:intergenic 35.0%
AATCTTCACTCACTTTATGG+TGG - chr8_4:47541815-47541834 Msa1329190:five_prime_UTR 35.0%
GCTTATTATGTACACCAACT+TGG + chr8_4:47542184-47542203 None:intergenic 35.0%
ATGAACAGCTTACAGCATTA+AGG + chr8_4:47542226-47542245 None:intergenic 35.0%
TATATATATCCAGACTCCAG+AGG + chr8_4:47542258-47542277 None:intergenic 35.0%
! ATGAAATGGTGGCGCTAAAA+CGG + chr8_4:47536062-47536081 None:intergenic 40.0%
GAAGAGATGAAAGTGAAGGA+AGG + chr8_4:47536215-47536234 None:intergenic 40.0%
AGGAGAAGAGATGAAAGTGA+AGG + chr8_4:47536219-47536238 None:intergenic 40.0%
!!! AGGTTTTAGTTCAATTCCCG+AGG - chr8_4:47536321-47536340 Msa1329190:CDS 40.0%
AGAAAGGCAGAAAGACACAA+GGG + chr8_4:47536393-47536412 None:intergenic 40.0%
AAGAAAGGCAGAAAGACACA+AGG + chr8_4:47536394-47536413 None:intergenic 40.0%
CTACTACTTCAAAACGATCG+TGG - chr8_4:47536455-47536474 Msa1329190:CDS 40.0%
CTCCAAGTAGAATTCAAGTG+TGG + chr8_4:47536564-47536583 None:intergenic 40.0%
GACTTTGATCTATGTTCGGT+TGG - chr8_4:47536924-47536943 Msa1329190:CDS 40.0%
TCAAATGAATGATGCTCTGC+AGG + chr8_4:47537204-47537223 None:intergenic 40.0%
CAATGTAATTATGGGGAGGA+AGG + chr8_4:47537234-47537253 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG - chr8_4:47537595-47537614 Msa1329190:intron 40.0%
! ACATTTTCACATGTACCTCC+AGG - chr8_4:47537863-47537882 Msa1329190:intron 40.0%
TGATTACTACCTCAGGAAGA+AGG - chr8_4:47537919-47537938 Msa1329190:intron 40.0%
ATTGAACCATGGGATCTTCA+AGG - chr8_4:47537995-47538014 Msa1329190:intron 40.0%
! TACTAGGAGTACAAGGAGTA+CGG - chr8_4:47538100-47538119 Msa1329190:intron 40.0%
!! CTATTCGTTCTAGTTCCTGT+TGG + chr8_4:47538337-47538356 None:intergenic 40.0%
ACGAATAGAGCAACAAAAGC+AGG - chr8_4:47538349-47538368 Msa1329190:intron 40.0%
TATTGCTTTGTCTCTTCCTG+TGG + chr8_4:47538386-47538405 None:intergenic 40.0%
! ATATAACTCGGGTTCGAGTT+CGG + chr8_4:47540192-47540211 None:intergenic 40.0%
!! ATCGGTTTGGCTTGATCTTA+TGG - chr8_4:47540255-47540274 Msa1329190:intron 40.0%
AGGAGGGATTTCAAAAATCG+AGG + chr8_4:47540800-47540819 None:intergenic 40.0%
! GCAGAAAGTATACACATGCA+TGG + chr8_4:47541309-47541328 None:intergenic 40.0%
! TAACTTGTACTGCAGGAAGA+AGG - chr8_4:47541416-47541435 Msa1329190:intron 40.0%
ATAGTTAGGAGGGTGAGAAT+TGG + chr8_4:47541573-47541592 None:intergenic 40.0%
!! ACTAGCATCATGGTATTGGT+GGG + chr8_4:47541648-47541667 None:intergenic 40.0%
! AACTAGCATCATGGTATTGG+TGG + chr8_4:47541649-47541668 None:intergenic 40.0%
GTTGGAGAAAACTAGCATCA+TGG + chr8_4:47541658-47541677 None:intergenic 40.0%
!! ATTTTTGGGCTTTCAAGGTG+TGG + chr8_4:47541683-47541702 None:intergenic 40.0%
TATGGTGGTAACAGCAGTAA+TGG - chr8_4:47541830-47541849 Msa1329190:five_prime_UTR 40.0%
CACATGAAGAATAGCTGCAT+TGG + chr8_4:47541981-47542000 None:intergenic 40.0%
CAATGCAGCTATTCTTCATG+TGG - chr8_4:47541979-47541998 Msa1329190:five_prime_UTR 40.0%
! TGATGAGTATTGCTCCAAGT+TGG - chr8_4:47542167-47542186 Msa1329190:five_prime_UTR 40.0%
!! ATATATGAACCTCTGGAGTC+TGG - chr8_4:47542246-47542265 Msa1329190:five_prime_UTR 40.0%
! CTCCTTTTCAGTACTCCTCT+CGG - chr8_4:47536234-47536253 Msa1329190:three_prime_UTR 45.0%
! TCCTTTTCAGTACTCCTCTC+GGG - chr8_4:47536235-47536254 Msa1329190:three_prime_UTR 45.0%
CTTTGTTCTCTCCAACGAGA+GGG + chr8_4:47536298-47536317 None:intergenic 45.0%
GAAAGGCAGAAAGACACAAG+GGG + chr8_4:47536392-47536411 None:intergenic 45.0%
GAATGATGCTCTGCAGGTAT+AGG + chr8_4:47537198-47537217 None:intergenic 45.0%
ATGGGTCAGTTATTCCGGAA+CGG + chr8_4:47537400-47537419 None:intergenic 45.0%
GTTGGATGAAAACGAAAGCC+TGG + chr8_4:47537884-47537903 None:intergenic 45.0%
TAGACGATACCTTCTTCCTG+AGG + chr8_4:47537931-47537950 None:intergenic 45.0%
TCGATACCTTGAAGATCCCA+TGG + chr8_4:47538004-47538023 None:intergenic 45.0%
GAGCAACAAAAGCAGGATTC+TGG - chr8_4:47538356-47538375 Msa1329190:intron 45.0%
!! AGTCGTGACGGACAACATTT+AGG + chr8_4:47539070-47539089 None:intergenic 45.0%
! TATAACTCGGGTTCGAGTTC+GGG + chr8_4:47540191-47540210 None:intergenic 45.0%
AATTCCAACGGTGGTTGAGA+GGG + chr8_4:47541034-47541053 None:intergenic 45.0%
AAATTCCAACGGTGGTTGAG+AGG + chr8_4:47541035-47541054 None:intergenic 45.0%
TGGCTTGAAAATTCCAACGG+TGG + chr8_4:47541043-47541062 None:intergenic 45.0%
! CATTACGTTCAGGAGTGTGA+AGG + chr8_4:47541231-47541250 None:intergenic 45.0%
TTGTACTGCAGGAAGAAGGA+TGG - chr8_4:47541420-47541439 Msa1329190:intron 45.0%
TGTACTGCAGGAAGAAGGAT+GGG - chr8_4:47541421-47541440 Msa1329190:intron 45.0%
!! AAGAAGGATGGGTTGTATGC+AGG - chr8_4:47541432-47541451 Msa1329190:intron 45.0%
!! AGAAGGATGGGTTGTATGCA+GGG - chr8_4:47541433-47541452 Msa1329190:intron 45.0%
GGATTCAAGATCTGGCATGA+AGG + chr8_4:47541540-47541559 None:intergenic 45.0%
TAGGAGGGTGAGAATTGGTT+CGG + chr8_4:47541568-47541587 None:intergenic 45.0%
!! CTAGTTCTGGTTTGCATGAG+TGG + chr8_4:47541604-47541623 None:intergenic 45.0%
!! CTAGCATCATGGTATTGGTG+GGG + chr8_4:47541647-47541666 None:intergenic 45.0%
TTCACTTCCAGAGTTCCATG+TGG + chr8_4:47542087-47542106 None:intergenic 45.0%
!!! GTTAAAATATTATTTTTATT+TGG - chr8_4:47536638-47536657 Msa1329190:CDS 5.0%
!!! AATATAAATTAATTTTTTTG+AGG + chr8_4:47536797-47536816 None:intergenic 5.0%
!! TATTAAAAAAAAAAAAAAAC+TGG + chr8_4:47536982-47537001 None:intergenic 5.0%
!! CAAAAAAAAAATATTAAATA+TGG + chr8_4:47537098-47537117 None:intergenic 5.0%
!! TAAAAAAAAATAATTAACAA+AGG + chr8_4:47537804-47537823 None:intergenic 5.0%
!!! TGTTAAAAAATTTTTTTTTT+TGG - chr8_4:47539241-47539260 Msa1329190:intron 5.0%
!! TATTAAAATTAAAATACATT+TGG + chr8_4:47542287-47542306 None:intergenic 5.0%
!! TCCCGAGAGGAGTACTGAAA+AGG + chr8_4:47536239-47536258 None:intergenic 50.0%
CCTTTGTTCTCTCCAACGAG+AGG + chr8_4:47536299-47536318 None:intergenic 50.0%
CCTCTCGTTGGAGAGAACAA+AGG - chr8_4:47536296-47536315 Msa1329190:CDS 50.0%
CGTTGGAGAGAACAAAGGAG+AGG - chr8_4:47536301-47536320 Msa1329190:CDS 50.0%
CACAAGGGGACAAAACAGAC+AGG + chr8_4:47536378-47536397 None:intergenic 50.0%
GTCAGTTATTCCGGAACGGA+GGG + chr8_4:47537396-47537415 None:intergenic 50.0%
GGATGAAAACGAAAGCCTGG+AGG + chr8_4:47537881-47537900 None:intergenic 50.0%
TACAAAGGACGTGCCCCAAA+TGG - chr8_4:47538451-47538470 Msa1329190:intron 50.0%
TCATGGCGTGGAGAAGCAAT+GGG + chr8_4:47539658-47539677 None:intergenic 50.0%
ATCATGGCGTGGAGAAGCAA+TGG + chr8_4:47539659-47539678 None:intergenic 50.0%
! ATAACTCGGGTTCGAGTTCG+GGG + chr8_4:47540190-47540209 None:intergenic 50.0%
ATTCCAACGGTGGTTGAGAG+GGG + chr8_4:47541033-47541052 None:intergenic 50.0%
!! GTGAGAATTGGTTCGGGTTG+GGG + chr8_4:47541561-47541580 None:intergenic 50.0%
!! GGTGAGAATTGGTTCGGGTT+GGG + chr8_4:47541562-47541581 None:intergenic 50.0%
! AGGAGGGTGAGAATTGGTTC+GGG + chr8_4:47541567-47541586 None:intergenic 50.0%
GGCTTTCAAGGTGTGGAAGT+TGG + chr8_4:47541676-47541695 None:intergenic 50.0%
TTCTACCTCCAGTTGCCACA+TGG - chr8_4:47542069-47542088 Msa1329190:five_prime_UTR 50.0%
GGCAATCGATGATCAGTTGC+CGG - chr8_4:47542310-47542329 Msa1329190:five_prime_UTR 50.0%
GAGAGAGATCAGATCCCGAG+AGG + chr8_4:47536252-47536271 None:intergenic 55.0%
TCTCTCCAACGAGAGGGAGA+GGG + chr8_4:47536292-47536311 None:intergenic 55.0%
TTCTCTCCAACGAGAGGGAG+AGG + chr8_4:47536293-47536312 None:intergenic 55.0%
TCTTCCTACTCCCTCCGTTC+CGG - chr8_4:47537383-47537402 Msa1329190:intron 55.0%
TATTCCGGAACGGAGGGAGT+AGG + chr8_4:47537390-47537409 None:intergenic 55.0%
GGTCAGTTATTCCGGAACGG+AGG + chr8_4:47537397-47537416 None:intergenic 55.0%
! GCAGGATTCTGGAAAGCCAC+AGG - chr8_4:47538367-47538386 Msa1329190:intron 55.0%
TTTCCCCTCTCAACCACCGT+TGG - chr8_4:47541027-47541046 Msa1329190:intron 55.0%
! CGGGTTGGGGATTCAAGATC+TGG + chr8_4:47541548-47541567 None:intergenic 55.0%
!! GGGTGAGAATTGGTTCGGGT+TGG + chr8_4:47541563-47541582 None:intergenic 55.0%
GAGTTCCATGTGGCAACTGG+AGG + chr8_4:47542077-47542096 None:intergenic 55.0%
CCAGAGTTCCATGTGGCAAC+TGG + chr8_4:47542080-47542099 None:intergenic 55.0%
CCAGTTGCCACATGGAACTC+TGG - chr8_4:47542077-47542096 Msa1329190:five_prime_UTR 55.0%
TCTCCAACGAGAGGGAGAGG+GGG + chr8_4:47536290-47536309 None:intergenic 60.0%
CTCTCCAACGAGAGGGAGAG+GGG + chr8_4:47536291-47536310 None:intergenic 60.0%
TCTCCCCCTCTCCCTCTCGT+TGG - chr8_4:47536284-47536303 Msa1329190:exon 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 47536031 47542365 47536031 ID=Msa1329190;Name=Msa1329190
chr8_4 mRNA 47536031 47542365 47536031 ID=Msa1329190-mRNA-1;Parent=Msa1329190;Name=Msa1329190-mRNA-1;_AED=0.06;_eAED=0.06;_QI=603|1|1|1|0.66|0.5|4|260|368
chr8_4 exon 47536031 47536965 47536031 ID=Msa1329190-mRNA-1:exon:13643;Parent=Msa1329190-mRNA-1
chr8_4 exon 47539859 47540130 47539859 ID=Msa1329190-mRNA-1:exon:13642;Parent=Msa1329190-mRNA-1
chr8_4 exon 47540380 47540563 47540380 ID=Msa1329190-mRNA-1:exon:13641;Parent=Msa1329190-mRNA-1
chr8_4 exon 47541787 47542365 47541787 ID=Msa1329190-mRNA-1:exon:13640;Parent=Msa1329190-mRNA-1
chr8_4 five_prime_UTR 47541787 47542365 47541787 ID=Msa1329190-mRNA-1:five_prime_utr;Parent=Msa1329190-mRNA-1
chr8_4 five_prime_UTR 47540540 47540563 47540540 ID=Msa1329190-mRNA-1:five_prime_utr;Parent=Msa1329190-mRNA-1
chr8_4 CDS 47540380 47540539 47540380 ID=Msa1329190-mRNA-1:cds;Parent=Msa1329190-mRNA-1
chr8_4 CDS 47539859 47540130 47539859 ID=Msa1329190-mRNA-1:cds;Parent=Msa1329190-mRNA-1
chr8_4 CDS 47536291 47536965 47536291 ID=Msa1329190-mRNA-1:cds;Parent=Msa1329190-mRNA-1
chr8_4 three_prime_UTR 47536031 47536290 47536031 ID=Msa1329190-mRNA-1:three_prime_utr;Parent=Msa1329190-mRNA-1
Gene Sequence

>Msa1329190

ATGAATACATTTTCACATGTACCTCCAGGCTTTCGTTTTCATCCAACTGATGAAGAACTTGTTGATTACTACCTCAGGAAGAAGGTATCGTCTAAAAAGATTGATCTCGATGTCATCAAAGACGTTGATCTCTATAAAATTGAACCATGGGATCTTCAAGAATTATGCAAAATAGGAAGTGATGAACAAAATGACTGGTATTTCTTTAGTCATAAAGATAAGAAGTATCCAACAGGAACTAGAACGAATAGAGCAACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGACAAAGCAATATACTCAAAACAATTTCTGGTTGGGATGAGAAAGACTCTAGTATTTTACAAAGGACGTGCCCCAAATGGACAGAAATCTGATTGGATCATGCATGAGTATCGTCTTGAAACTAATCAAAATGGAATTTCTCAGGAAGAAGGATGGGTTGTATGCAGGGTATTCAAGAAAAGAATGACAACAGTGCAGAAAATGAATGAATATGATCAATCACCATGTAACTGGTATGATGATCAAGTTTCCTTCATGCCAGATCTTGAATCCCCAACCCGAACCAATTCTCACCCTCCTAACTATACTTCATACCACTCATGCAAACCAGAACTAGAATTAATGCAATATAACACACCCCACCAATACCATGATGCTAGTTTTCTCCAACTTCCACACCTTGAAAGCCCAAAAATTACTCAATCTATTATCCCTTATAATCATCATGCTCATGCAAACAATAACAATATTGCACTTACTCAACATCAGCAACAACAACAGATGCAATATTTTCAGTACCATCAACAAAATCTTCACTCACTTTATGGTGGTAACAGCAGTAATGGCAATGATGAACAAGTTACTGATTGGAGAGTGCTTGACAAGTTTGTTGCTTCTCAGCTAAGTCATGAAGAAAATAATAATAATAATAATCAAGATCATGTTTCTAATAAAGAAGCTAGTTCTTTCTCCAATGCAGCTATTCTTCATGTGGCTGAACAGATTACTCTTCTTGCTAATGAATCCAAAAAGAATGATGTTTCTGAGGAACATGCTTCAACTTCTACCTCCAGTTGCCACATGGAACTCTGGAAGTGA
Protein sequence

>Msa1329190

MNTFSHVPPGFRFHPTDEELVDYYLRKKVSSKKIDLDVIKDVDLYKIEPWDLQELCKIGSDEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKQFLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNQNGISQEEGWVVCRVFKKRMTTVQKMNEYDQSPCNWYDDQVSFMPDLESPTRTNSHPPNYTSYHSCKPELELMQYNTPHQYHDASFLQLPHLESPKITQSIIPYNHHAHANNNNIALTQHQQQQQMQYFQYHQQNLHSLYGGNSSNGNDEQVTDWRVLDKFVASQLSHEENNNNNNQDHVSNKEASSFSNAAILHVAEQITLLANESKKNDVSEEHASTSTSSCHMELWK*