AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1349310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1349310 MtrunA17_Chr1g0200071 80.172 232 36 1 165 396 217 438 2.54e-126 371
Msa1349310 MtrunA17_Chr1g0200071 73.826 149 34 2 28 171 1 149 1.34e-66 218
Msa1349310 MtrunA17_Chr1g0200091 80.172 232 36 1 165 396 217 438 2.54e-126 371
Msa1349310 MtrunA17_Chr1g0200091 73.826 149 34 2 28 171 1 149 1.34e-66 218
Msa1349310 MtrunA17_Chr1g0200121 79.741 232 37 1 165 396 217 438 3.80e-126 371
Msa1349310 MtrunA17_Chr1g0200121 73.826 149 34 2 28 171 1 149 1.34e-66 218
Msa1349310 MtrunA17_Chr6g0458111 77.391 230 42 1 165 394 217 436 7.65e-122 360
Msa1349310 MtrunA17_Chr6g0458111 73.826 149 34 2 28 171 1 149 1.44e-66 218
Msa1349310 MtrunA17_Chr6g0458091 77.391 230 42 1 165 394 217 436 7.65e-122 360
Msa1349310 MtrunA17_Chr6g0458091 73.826 149 34 2 28 171 1 149 1.44e-66 218
Msa1349310 MtrunA17_Chr1g0196251 51.688 385 125 6 30 363 6 380 1.48e-120 355
Msa1349310 MtrunA17_Chr4g0005781 77.632 228 41 1 165 392 217 434 2.19e-120 356
Msa1349310 MtrunA17_Chr4g0005781 73.826 149 34 2 28 171 1 149 8.01e-67 218
Msa1349310 MtrunA17_Chr1g0200111 90.960 177 16 0 212 388 1 177 1.52e-112 326
Msa1349310 MtrunA17_Chr1g0150331 72.414 232 28 2 165 396 220 415 2.00e-108 325
Msa1349310 MtrunA17_Chr1g0150331 73.154 149 35 2 28 171 1 149 7.88e-66 215
Msa1349310 MtrunA17_Chr8g0340771 70.130 231 59 1 165 395 219 439 3.72e-106 320
Msa1349310 MtrunA17_Chr8g0340771 66.216 148 45 3 29 171 4 151 1.00e-53 184
Msa1349310 MtrunA17_Chr1g0204031 68.398 231 62 2 165 395 213 432 9.41e-100 315
Msa1349310 MtrunA17_Chr1g0204031 57.592 191 63 4 30 204 5 193 1.49e-55 196
Msa1349310 MtrunA17_Chr1g0193591 66.228 228 67 1 165 392 217 434 1.32e-98 300
Msa1349310 MtrunA17_Chr1g0193591 67.586 145 44 1 30 171 5 149 5.45e-60 201
Msa1349310 MtrunA17_Chr1g0156421 64.474 228 71 1 165 392 217 434 2.35e-96 295
Msa1349310 MtrunA17_Chr1g0156421 66.901 142 44 1 33 171 8 149 4.78e-58 196
Msa1349310 MtrunA17_Chr5g0415391 64.629 229 71 1 165 393 179 397 5.82e-96 293
Msa1349310 MtrunA17_Chr5g0415391 57.658 111 44 1 64 171 1 111 1.56e-33 129
Msa1349310 MtrunA17_Chr2g0319341 61.135 229 77 2 165 391 116 334 2.88e-86 269
Msa1349310 MtrunA17_Chr2g0298371 60.550 218 74 2 167 382 101 308 2.42e-84 259
Msa1349310 MtrunA17_Chr2g0318281 57.000 200 76 2 191 390 5 194 1.32e-69 219
Msa1349310 MtrunA17_Chr1g0156411 67.883 137 41 1 33 166 12 148 5.14e-61 194
Msa1349310 MtrunA17_Chr8g0340361 55.135 185 77 2 212 391 1 184 9.28e-61 194
Msa1349310 MtrunA17_Chr1g0210931 51.339 224 50 3 167 390 66 230 9.74e-61 197
Msa1349310 MtrunA17_Chr1g0204041 69.444 144 39 2 28 166 1 144 8.44e-60 191
Msa1349310 MtrunA17_Chr8g0336511 63.694 157 51 3 21 171 59 215 1.62e-57 193
Msa1349310 MtrunA17_Chr8g0336511 60.331 121 38 1 165 285 283 393 6.88e-38 140
Msa1349310 MtrunA17_Chr2g0318291 61.702 141 50 2 30 166 7 147 1.40e-49 167
Msa1349310 MtrunA17_Chr8g0340371 59.859 142 51 3 30 167 5 144 3.46e-46 158
Msa1349310 MtrunA17_Chr4g0026961 47.486 179 73 3 167 343 53 212 4.65e-45 155
Msa1349310 MtrunA17_Chr2g0298381 69.474 95 26 1 30 121 5 99 1.45e-38 134
Msa1349310 MtrunA17_Chr8g0341021 65.657 99 31 1 30 125 6 104 2.05e-38 134
Msa1349310 MtrunA17_Chr8g0380091 45.390 141 69 3 32 166 275 413 1.23e-30 124
Msa1349310 MtrunA17_Chr8g0380091 25.974 231 158 4 163 391 485 704 1.21e-15 79.0
Msa1349310 MtrunA17_Chr6g0483121 42.857 140 77 1 30 166 89 228 5.80e-30 120
Msa1349310 MtrunA17_Chr6g0483121 28.829 222 143 4 167 386 306 514 2.46e-22 98.6
Msa1349310 MtrunA17_Chr8g0392641 42.657 143 79 1 27 166 141 283 6.97e-30 121
Msa1349310 MtrunA17_Chr8g0392641 29.148 223 143 4 167 387 361 570 1.97e-20 93.2
Msa1349310 MtrunA17_Chr1g0200101 48.201 139 45 3 46 184 2 113 1.23e-27 105
Msa1349310 MtrunA17_Chr1g0211481 65.823 79 24 1 30 105 4 82 5.77e-27 103
Msa1349310 MtrunA17_Chr2g0319351 70.833 72 18 1 30 98 5 76 2.77e-25 98.2
Msa1349310 MtrunA17_Chr8g0341041 64.179 67 24 0 165 231 6 72 9.87e-22 91.3
Msa1349310 MtrunA17_Chr8g0341041 59.322 59 24 0 332 390 100 158 2.75e-15 73.2
Msa1349310 MtrunA17_Chr3g0116821 29.333 150 85 3 19 166 77 207 1.53e-11 65.9
Msa1349310 MtrunA17_Chr2g0287231 27.000 200 108 7 16 202 2 176 2.19e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1349310 AT1G07930.2 54.881 379 141 10 28 395 1 360 2.03e-124 364
Msa1349310 AT1G07920.1 74.892 231 48 1 165 395 217 437 3.55e-119 353
Msa1349310 AT1G07920.1 73.826 149 34 2 28 171 1 149 1.69e-66 218
Msa1349310 AT1G07940.4 74.892 231 48 1 165 395 217 437 3.55e-119 353
Msa1349310 AT1G07940.4 73.826 149 34 2 28 171 1 149 1.69e-66 218
Msa1349310 AT1G07940.1 74.892 231 48 1 165 395 217 437 3.55e-119 353
Msa1349310 AT1G07940.1 73.826 149 34 2 28 171 1 149 1.69e-66 218
Msa1349310 AT1G07940.2 74.892 231 48 1 165 395 217 437 3.55e-119 353
Msa1349310 AT1G07940.2 73.826 149 34 2 28 171 1 149 1.69e-66 218
Msa1349310 AT1G07940.3 74.892 231 48 1 165 395 217 437 3.55e-119 353
Msa1349310 AT1G07940.3 73.826 149 34 2 28 171 1 149 1.69e-66 218
Msa1349310 AT5G60390.3 74.892 231 48 1 165 395 217 437 3.55e-119 353
Msa1349310 AT5G60390.3 73.826 149 34 2 28 171 1 149 1.69e-66 218
Msa1349310 AT5G60390.1 74.892 231 48 1 165 395 217 437 3.55e-119 353
Msa1349310 AT5G60390.1 73.826 149 34 2 28 171 1 149 1.69e-66 218
Msa1349310 AT5G60390.2 74.892 231 48 1 165 395 217 437 3.55e-119 353
Msa1349310 AT5G60390.2 73.826 149 34 2 28 171 1 149 1.69e-66 218
Msa1349310 AT1G07930.1 74.892 231 48 1 165 395 217 437 3.55e-119 353
Msa1349310 AT1G07930.1 73.826 149 34 2 28 171 1 149 1.69e-66 218
Msa1349310 AT1G35550.1 66.990 103 34 0 293 395 1 103 1.48e-43 147
Msa1349310 AT1G18070.1 42.143 140 78 1 30 166 99 238 4.32e-29 119
Msa1349310 AT1G18070.1 29.018 224 140 6 168 387 317 525 4.23e-21 95.5
Msa1349310 AT1G18070.2 42.143 140 78 1 30 166 99 238 4.32e-29 119
Msa1349310 AT1G18070.2 29.018 224 140 6 168 387 317 525 4.23e-21 95.5
Msa1349310 AT1G18070.3 42.143 140 78 1 30 166 99 238 5.68e-29 118
Msa1349310 AT1G18070.3 27.897 233 142 6 168 387 317 536 1.10e-18 88.2
Msa1349310 AT5G10630.1 42.143 140 71 4 32 163 239 376 6.30e-28 116
Msa1349310 AT5G10630.1 27.232 224 151 3 165 387 451 663 2.28e-17 84.7
Msa1349310 AT5G10630.5 42.143 140 71 4 32 163 240 377 6.32e-28 116
Msa1349310 AT5G10630.5 27.232 224 151 3 165 387 452 664 2.29e-17 84.7
Msa1349310 AT5G10630.2 42.143 140 71 4 32 163 240 377 6.32e-28 116
Msa1349310 AT5G10630.2 27.232 224 151 3 165 387 452 664 2.29e-17 84.7
Msa1349310 AT5G10630.3 42.143 140 71 4 32 163 310 447 6.66e-28 116
Msa1349310 AT5G10630.3 27.232 224 151 3 165 387 522 734 2.52e-17 84.3
Msa1349310 AT5G10630.4 42.143 140 71 4 32 163 315 452 6.82e-28 116
Msa1349310 AT5G10630.4 27.232 224 151 3 165 387 527 739 2.40e-17 84.7
Msa1349310 AT4G20360.1 29.560 159 85 4 18 171 63 199 1.19e-12 69.7
Msa1349310 AT4G20360.2 29.560 159 85 4 18 171 63 199 1.19e-12 69.7

Find 278 sgRNAs with CRISPR-Local

Find 743 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACCATTCTTCAAGAATT+TGG 0.066665 tig0010690:+18434 None:intergenic
ATCACCATTCATCAGGAATT+TGG 0.127785 tig0010690:+10679 None:intergenic
CTTATCCTTGATTCCTGTAT+TGG 0.213955 tig0010690:-11857 Msa1349310:CDS
GTCTACAAGTTTGGAGGAAT+TGG 0.246382 tig0010690:-11124 Msa1349310:CDS
GCTCTCCTTGCTTTCACTCT+TGG 0.289982 tig0010690:-19289 Msa1349310:five_prime_UTR
AAGTTAGCGGCCTCCTTGGC+TGG 0.295660 tig0010690:+10854 None:intergenic
CACCCTGGCAAGATTGAAAA+TGG 0.298039 tig0010690:-10806 Msa1349310:CDS
GCCTCTTAGGCTCGTTGATT+TGG 0.314662 tig0010690:+11182 None:intergenic
GTCTACAAGATTGGAGGAAT+TGG 0.315206 tig0010690:-18849 Msa1349310:five_prime_UTR
GCCTCTTAGGCTCATTGATT+TGG 0.315866 tig0010690:+18907 None:intergenic
CTTCAGAATGTCTACAAGTT+TGG 0.317793 tig0010690:-11133 Msa1349310:CDS
TGTCAAGAATGTTGCTGTTA+AGG 0.325240 tig0010690:-18673 Msa1349310:five_prime_UTR
TCACCATTCTTCAAGAATTT+GGG 0.331757 tig0010690:+18435 None:intergenic
ATAGCCAACCTTCTTCAAAT+AGG 0.332380 tig0010690:+19043 None:intergenic
CTCATTGGCGATGTCGACTC+TGG 0.336364 tig0010690:-12163 Msa1349310:CDS
CGTACTCTGGATTATTTAGA+TGG 0.336833 tig0010690:+20729 None:intergenic
TCACCATTCATCAGGAATTT+GGG 0.341892 tig0010690:+10680 None:intergenic
CTTCTTCTTCAATGCTGACT+TGG 0.345006 tig0010690:+18248 None:intergenic
CCTCCGACGGAGTACCTTCC+CGG 0.350967 tig0010690:-10959 Msa1349310:CDS
AAGATTAACATTGTTCTCAT+TGG 0.351539 tig0010690:-12178 Msa1349310:CDS
CACATCAACATTGTGGTCAT+TGG 0.354316 tig0010690:-19679 Msa1349310:five_prime_UTR
GTTCTCCTTGCTTTCACTCT+TGG 0.355410 tig0010690:-11788 Msa1349310:CDS
TGTTGAGAACGTTGATGTTA+AGG 0.355649 tig0010690:-10918 Msa1349310:CDS
TTCCTTGGCTGGGTCATCCT+TGG 0.355973 tig0010690:+18620 None:intergenic
TGAGAAAGAAGCTGCTGAAA+TGG 0.366760 tig0010690:-12071 Msa1349310:CDS
AAGTTGGCAGATTCCTTGGC+TGG 0.367989 tig0010690:+18609 None:intergenic
ATTCCATTTGTTCCCATCTC+TGG 0.368209 tig0010690:-19008 Msa1349310:five_prime_UTR
GCTCTCACAGAGGCCCTTCC+TGG 0.369900 tig0010690:-18714 Msa1349310:five_prime_UTR
ATATCTACCCTTGGAGTACT+TGG 0.380807 tig0010690:+19091 None:intergenic
TTTAAGCTCTTAAGTCCAAA+TGG 0.381529 tig0010690:-19716 Msa1349310:five_prime_UTR
ACTAAGATTGATAGGCGTTC+TGG 0.382761 tig0010690:-18477 Msa1349310:five_prime_UTR
ACCAAGATTGATAGGCGTTC+TGG 0.383042 tig0010690:-10722 Msa1349310:CDS
CTCCTTGGCTGGGTCATCCT+TGG 0.385824 tig0010690:+10865 None:intergenic
TGCGTCAAACTGTGGCTGTT+GGG 0.386099 tig0010690:-18320 Msa1349310:five_prime_UTR
TTCCATGGTCTGGCCATCCC+TGG 0.389009 tig0010690:+11814 None:intergenic
GTCATTGGCCATGTCGACTC+TGG 0.395247 tig0010690:-19664 Msa1349310:five_prime_UTR
CACCTCCAAGTTTGTAGATC+AGG 0.403181 tig0010690:+12119 None:intergenic
TGTGAAGAACGAACGGTAGT+AGG 0.403368 tig0010690:+20676 None:intergenic
TCATTCCTTGCTACTCAACT+AGG 0.416643 tig0010690:-20642 Msa1349310:five_prime_UTR
GCAAAAGTGACAACCATTCC+AGG 0.418006 tig0010690:+18786 None:intergenic
CTCATCATTGATTCCACTAC+TGG 0.419293 tig0010690:-19358 Msa1349310:five_prime_UTR
ATGAATCACCCTGGCCAGAT+TGG 0.425183 tig0010690:-18567 Msa1349310:five_prime_UTR
CTTAATGAAATCCCTGTGTC+CGG 0.429384 tig0010690:+19420 None:intergenic
CCTGTGGGGCGTGTCGAGAC+TGG 0.431830 tig0010690:-18819 Msa1349310:five_prime_UTR
CACCCTGGCCAGATTGGAAA+TGG 0.432985 tig0010690:-18561 Msa1349310:five_prime_UTR
TGTAAAGTTGGCAGATTCCT+TGG 0.433201 tig0010690:+18605 None:intergenic
GAGAAAGAAGCTGCTGAAAT+GGG 0.439100 tig0010690:-12070 Msa1349310:CDS
CTTGAGCTTGTCAAGGATCC+AGG 0.439379 tig0010690:+12027 None:intergenic
AGCGTTCATTCAAGTATGCC+TGG 0.444655 tig0010690:-19546 Msa1349310:five_prime_UTR
AGCTTCAAAAGCACCAATAC+AGG 0.445136 tig0010690:+11844 None:intergenic
GAGCATAGCCATTTCCAATC+TGG 0.445726 tig0010690:+18553 None:intergenic
GGAGAACTTGTTCCATGGTC+TGG 0.446567 tig0010690:+11804 None:intergenic
GGCTTGTCTGAAGGCCTCTT+AGG 0.446650 tig0010690:+11169 None:intergenic
GGCTTGTCTGAAGGCCTCTT+AGG 0.446650 tig0010690:+18894 None:intergenic
ACCTTGTGACGAAGGAGAAA+AGG 0.446990 tig0010690:+20599 None:intergenic
AAACCAGAGATGGGAACAAA+TGG 0.449170 tig0010690:+19005 None:intergenic
GGTCTGCTTAAGTCCTCCAC+TGG 0.451209 tig0010690:+18269 None:intergenic
ACTTCAGTTGTCAGTCCAGT+AGG 0.456008 tig0010690:+18762 None:intergenic
ACCAGAACGCCTATCAATCT+TGG 0.457446 tig0010690:+10721 None:intergenic
CTACAGGATGTCTACAAGAT+TGG 0.458825 tig0010690:-18858 Msa1349310:five_prime_UTR
AGTCTCAACCACCATGGGCT+TGG 0.462350 tig0010690:+18386 None:intergenic
ACCAAATCAATGAGCCTAAG+AGG 0.463105 tig0010690:-18908 Msa1349310:five_prime_UTR
CATTCCTTGCTACTCAACTA+GGG 0.464545 tig0010690:-20641 Msa1349310:five_prime_UTR
TGGGTCATCCTTGGAGTTTG+AGG 0.465051 tig0010690:+18629 None:intergenic
ACCAAATCAACGAGCCTAAG+AGG 0.465441 tig0010690:-11183 Msa1349310:CDS
TTCATTAAGAACATGATCAC+TGG 0.467307 tig0010690:-11905 Msa1349310:CDS
CTCAACCACCATGGGCTTGG+TGG 0.468734 tig0010690:+18389 None:intergenic
TGGGTCATCCTTGGAGTTAG+AGG 0.469156 tig0010690:+10874 None:intergenic
TAGGCTCATTGATTTGGTCA+AGG 0.472707 tig0010690:+18913 None:intergenic
TACCAGCATCACCATTCATC+AGG 0.473503 tig0010690:+10672 None:intergenic
TTAATGAAATCCCTGTGTCC+GGG 0.473933 tig0010690:+19421 None:intergenic
AGTCCAAATGGGTAAGGAAA+AGG 0.474535 tig0010690:-19704 Msa1349310:five_prime_UTR
AGGCTCATTGATTTGGTCAA+GGG 0.475242 tig0010690:+18914 None:intergenic
GGTTTATAAACTACGTACTC+TGG 0.475822 tig0010690:+20716 None:intergenic
AACTTGTTACTAAGATTGAT+AGG 0.478352 tig0010690:-18485 Msa1349310:five_prime_UTR
TAGCCATTTCCAATCTGGCC+AGG 0.481484 tig0010690:+18558 None:intergenic
TCACCATTGACATTGCTCTC+TGG 0.481623 tig0010690:-19486 Msa1349310:five_prime_UTR
TAGGCTCGTTGATTTGGTCA+AGG 0.482009 tig0010690:+11188 None:intergenic
TTAAGCTCTTAAGTCCAAAT+GGG 0.483320 tig0010690:-19715 Msa1349310:five_prime_UTR
ACAATCAGCTTGGGATGTTC+CGG 0.483792 tig0010690:+19387 None:intergenic
TGTAAAGTTAGCGGCCTCCT+TGG 0.484480 tig0010690:+10850 None:intergenic
AGCTTGTTACCAAGATTGAT+AGG 0.488333 tig0010690:-10730 Msa1349310:CDS
TACAAACCTTGACTGGTACA+AGG 0.490199 tig0010690:-18955 Msa1349310:five_prime_UTR
TCATCCTATTTGAAGAAGGT+TGG 0.491235 tig0010690:-19047 Msa1349310:five_prime_UTR
AGACTTCAGTCAAGTATGCC+TGG 0.493195 tig0010690:-12045 Msa1349310:CDS
GATTGATAGGCGTTCTGGTA+AGG 0.495592 tig0010690:-18472 Msa1349310:five_prime_UTR
ATCTCCCTCAAAACCAGAGA+TGG 0.496573 tig0010690:+18995 None:intergenic
CATCAAGGCTGTGGAGAAGA+AGG 0.499167 tig0010690:-18295 Msa1349310:five_prime_UTR
CAGAATGTCTACAAGTTTGG+AGG 0.499933 tig0010690:-11130 Msa1349310:CDS
AAGCACCAATACAGGAATCA+AGG 0.500537 tig0010690:+11852 None:intergenic
CTGACCATCCTTAGAAATAC+CGG 0.501461 tig0010690:+19324 None:intergenic
AGTTTCATCCTATTTGAAGA+AGG 0.501588 tig0010690:-19051 Msa1349310:five_prime_UTR
ATCATTGATTCCACTACTGG+TGG 0.502099 tig0010690:-19355 Msa1349310:five_prime_UTR
GAGGTGTGGCAGTCAAGAAC+AGG 0.504238 tig0010690:+18531 None:intergenic
TGCACTGTCATTGATGTCCC+TGG 0.505435 tig0010690:-11938 Msa1349310:CDS
CTTCAGTTGTCAGTCCAGTA+GGG 0.506099 tig0010690:+18763 None:intergenic
AATTTCATCATATCTACCCT+TGG 0.508007 tig0010690:+19082 None:intergenic
AATGACAGTGCAGTAGTACT+TGG 0.509426 tig0010690:+19450 None:intergenic
AGTCGGAGGGGCTTGTCTGA+AGG 0.510894 tig0010690:+11160 None:intergenic
CTCTTAAGTCCAAATGGGTA+AGG 0.512110 tig0010690:-19710 Msa1349310:five_prime_UTR
AGTCTGCTAAAGTCCTCCAC+TGG 0.513823 tig0010690:+10514 None:intergenic
AGCAGGATGATCTATTCACT+TGG 0.514214 tig0010690:-18218 Msa1349310:exon
AGGCTCGTTGATTTGGTCAA+GGG 0.514470 tig0010690:+11189 None:intergenic
TGAGAACGGCACAATCAGCT+TGG 0.516820 tig0010690:+19377 None:intergenic
AGGAATTGGAACTGTGCCTG+TGG 0.517140 tig0010690:-18835 Msa1349310:five_prime_UTR
GATCACTTGAGATGTAAAGT+TGG 0.519518 tig0010690:+18593 None:intergenic
GAGGTGTGGCAGTGAAGAAC+AGG 0.519789 tig0010690:+10776 None:intergenic
ACTTTAGCTGTCAGTCCAGT+AGG 0.521394 tig0010690:+11037 None:intergenic
GAAGAAGAAGTGAACCGAGC+AGG 0.523086 tig0010690:-18235 Msa1349310:five_prime_UTR
GAACAAAAGCTATGAGATGA+AGG 0.523844 tig0010690:+18174 None:intergenic
GTGAACAAGGCGTCCACCAT+AGG 0.526823 tig0010690:+10989 None:intergenic
GAGCCCAAATTCTTGAAGAA+TGG 0.528480 tig0010690:-18438 Msa1349310:five_prime_UTR
TCCCACATTGTCACCAGGAA+GGG 0.528721 tig0010690:+18701 None:intergenic
AGTCGGAGGGGCTTGTCTGA+AGG 0.529275 tig0010690:+18885 None:intergenic
AAGCCCAAATTCCTGATGAA+TGG 0.529635 tig0010690:-10683 Msa1349310:CDS
GAGAACGGCACAATCAGCTT+GGG 0.529995 tig0010690:+19378 None:intergenic
GGTCACCTGATCTACAAACT+TGG 0.530032 tig0010690:-12124 Msa1349310:CDS
TCATTGGCGATGTCGACTCT+GGG 0.530072 tig0010690:-12162 Msa1349310:CDS
AAGAAGAGCACAATCAGCTT+CGG 0.530807 tig0010690:+11877 None:intergenic
TGTTGGGGTCATCAAGGCTG+TGG 0.532596 tig0010690:-18304 Msa1349310:five_prime_UTR
GTGAAGAACGAACGGTAGTA+GGG 0.534571 tig0010690:+20677 None:intergenic
CAGGATGTCTACAAGATTGG+AGG 0.535636 tig0010690:-18855 Msa1349310:five_prime_UTR
CATCACGGCTGTGGAGAAGA+AGG 0.535804 tig0010690:-10540 Msa1349310:CDS
GGAATTGGAACTGTGCCTGT+GGG 0.536194 tig0010690:-18834 Msa1349310:five_prime_UTR
GAGACTGGTGTCTTGAAACC+TGG 0.536851 tig0010690:-11079 Msa1349310:CDS
GATTGATAGGCGTTCTGGTA+GGG 0.537919 tig0010690:-10717 Msa1349310:CDS
CCTGTGGGACGTGTTGAGAC+TGG 0.537981 tig0010690:-11094 Msa1349310:CDS
CTTTAGCTGTCAGTCCAGTA+GGG 0.538115 tig0010690:+11038 None:intergenic
CTTCCAGAGAGCAATGTCAA+TGG 0.541189 tig0010690:+19483 None:intergenic
ATTAAATCTCACATAGTCGC+CGG 0.542013 tig0010690:+10940 None:intergenic
AGCAAACTTGACAGCAATGT+GGG 0.543557 tig0010690:+18509 None:intergenic
TTCTCTGAATATCCTCCACT+TGG 0.543785 tig0010690:-10608 Msa1349310:CDS
TGCACTGTCATTGATGCCCC+CGG 0.544718 tig0010690:-19439 Msa1349310:five_prime_UTR
GCCCCTCCGACTACCACTAC+AGG 0.545601 tig0010690:-18874 Msa1349310:five_prime_UTR
CACTTGATCTACAAGCTTGG+AGG 0.545798 tig0010690:-19622 Msa1349310:five_prime_UTR
TCAAGGGCCTCAAGAAGAGT+TGG 0.546278 tig0010690:+18930 None:intergenic
TGTGGCTGTTGGGGTCATCA+AGG 0.547535 tig0010690:-18310 Msa1349310:five_prime_UTR
GTCTGCTTAAGTCCTCCACT+GGG 0.549538 tig0010690:+18270 None:intergenic
AGTTAGCGGCCTCCTTGGCT+GGG 0.551707 tig0010690:+10855 None:intergenic
GGCTTCAAAACCACCAGTAG+TGG 0.551737 tig0010690:+19345 None:intergenic
GCTTGTCCCTGACAGTAAAA+CGG 0.552331 tig0010690:+10585 None:intergenic
AGATTGATAGGCGTTCTGGT+AGG 0.554210 tig0010690:-10718 Msa1349310:CDS
GGTCACTTGATCTACAAGCT+TGG 0.555547 tig0010690:-19625 Msa1349310:five_prime_UTR
CCAGTCTCGACACGCCCCAC+AGG 0.557031 tig0010690:+18819 None:intergenic
TCAACCACCATGGGCTTGGT+GGG 0.557624 tig0010690:+18390 None:intergenic
ATCACACTTGACAGCAATGT+GGG 0.559060 tig0010690:+10754 None:intergenic
AAGCAAGGAGAGCATGTTCA+CGG 0.559179 tig0010690:+19299 None:intergenic
TCATTGGCCATGTCGACTCT+GGG 0.559180 tig0010690:-19663 Msa1349310:five_prime_UTR
CTCAAGGCTGAACGTGAAAG+AGG 0.559327 tig0010690:-19511 Msa1349310:five_prime_UTR
TTCTTGAAGAATGGTGATGC+TGG 0.561159 tig0010690:-18429 Msa1349310:five_prime_UTR
GAAGCCGGTATTTCTAAGGA+TGG 0.564413 tig0010690:-19328 Msa1349310:five_prime_UTR
TCTGGGAAATCAACCACCAC+TGG 0.564990 tig0010690:-19646 Msa1349310:five_prime_UTR
TTGGACCCTTGTACCAGTCA+AGG 0.565802 tig0010690:+18949 None:intergenic
ACAAACCTTGACTGGTACAA+GGG 0.567625 tig0010690:-18954 Msa1349310:five_prime_UTR
CACCTGATCTACAAACTTGG+AGG 0.568965 tig0010690:-12121 Msa1349310:CDS
TCAACCACCATCGGCATGGT+GGG 0.569853 tig0010690:+10635 None:intergenic
TAATGAAATCCCTGTGTCCG+GGG 0.570266 tig0010690:+19422 None:intergenic
ATGCGTCAAACTGTGGCTGT+TGG 0.571110 tig0010690:-18321 Msa1349310:five_prime_UTR
TTCATTAAGAACATGATCAC+CGG 0.572337 tig0010690:-19406 Msa1349310:five_prime_UTR
AGCAAGGAGAGCATGTTCAC+GGG 0.572470 tig0010690:+19300 None:intergenic
GACTTGAGATGTAAAGTTAG+CGG 0.574731 tig0010690:+10841 None:intergenic
TTCCTGATGAATGGTGATGC+TGG 0.575455 tig0010690:-10674 Msa1349310:CDS
GAGAAAGTCTCAACCACCAT+GGG 0.575954 tig0010690:+18381 None:intergenic
GAAGCTAGCATGTCCAGGGA+TGG 0.576146 tig0010690:-11827 Msa1349310:CDS
CTTGAGCTTGTCAAGGACCC+AGG 0.577041 tig0010690:+19528 None:intergenic
AGCGCTCTACAAACCTTGAC+TGG 0.578233 tig0010690:-18962 Msa1349310:five_prime_UTR
ATTCTGAAGCGGTAGTCGGA+GGG 0.580221 tig0010690:+11147 None:intergenic
TATCTACCCTTGGAGTACTT+GGG 0.580849 tig0010690:+19092 None:intergenic
GAGAAAGTCTCAACCACCAT+CGG 0.581032 tig0010690:+10626 None:intergenic
GCGTCAAACTGTGGCTGTTG+GGG 0.582443 tig0010690:-18319 Msa1349310:five_prime_UTR
ATCCTGTAGTGGTAGTCGGA+GGG 0.583230 tig0010690:+18872 None:intergenic
GTAGGGTTTATATATAAACA+AGG 0.583652 tig0010690:+20694 None:intergenic
TGTTGGTGTCATCACGGCTG+TGG 0.584289 tig0010690:-10549 Msa1349310:CDS
TTAAATCTCACATAGTCGCC+GGG 0.584341 tig0010690:+10941 None:intergenic
CTTCGAGTAAGAAATGTCAA+TGG 0.585142 tig0010690:+11982 None:intergenic
ATCCCACATTGTCACCAGGA+AGG 0.585536 tig0010690:+18700 None:intergenic
GAGACTGGTGTCATAAAACC+TGG 0.585699 tig0010690:-18804 Msa1349310:five_prime_UTR
CTGGGTCCTTGACAAGCTCA+AGG 0.585742 tig0010690:-19527 Msa1349310:five_prime_UTR
AGTTGGCAGATTCCTTGGCT+GGG 0.586600 tig0010690:+18610 None:intergenic
GGCCCTTCCTGGTGACAATG+TGG 0.586985 tig0010690:-18703 Msa1349310:five_prime_UTR
TTGATTTCCCAGAGTCGACA+TGG 0.588973 tig0010690:+19656 None:intergenic
CTATGTTGCCTCTAACTCCA+AGG 0.589207 tig0010690:-10882 Msa1349310:CDS
CTGTTAAGGATCTCAAGCGT+GGG 0.589274 tig0010690:-18659 Msa1349310:five_prime_UTR
CCAGTCTCAACACGTCCCAC+AGG 0.589278 tig0010690:+11094 None:intergenic
TCCTGTAGTGGTAGTCGGAG+GGG 0.589369 tig0010690:+18873 None:intergenic
TGGTGTCTTGAAACCTGGAA+TGG 0.590307 tig0010690:-11074 Msa1349310:CDS
GTCTGCTAAAGTCCTCCACT+GGG 0.590439 tig0010690:+10515 None:intergenic
TTCTCTGAATATCCTCCACT+CGG 0.591172 tig0010690:-18363 Msa1349310:five_prime_UTR
GCCCTTCCTGGTGACAATGT+GGG 0.592402 tig0010690:-18702 Msa1349310:five_prime_UTR
CCGGGAAGGTACTCCGTCGG+AGG 0.592556 tig0010690:+10959 None:intergenic
CTGGATCCTTGACAAGCTCA+AGG 0.592768 tig0010690:-12026 Msa1349310:CDS
CTCCAAGGATGACCCAGCCA+AGG 0.595225 tig0010690:-18622 Msa1349310:five_prime_UTR
AGCAAGGAGAACTTGTTCCA+TGG 0.595909 tig0010690:+11799 None:intergenic
ATCTCACATAGTCGCCGGGA+AGG 0.596745 tig0010690:+10945 None:intergenic
TTCTGAAGCGGTAGTCGGAG+GGG 0.597002 tig0010690:+11148 None:intergenic
TCTGGGAAGTCAACTACCAC+CGG 0.597549 tig0010690:-12145 Msa1349310:CDS
TAGGGTTTATATATAAACAA+GGG 0.598049 tig0010690:+20695 None:intergenic
TAGATATGATGAAATTGTGA+AGG 0.599770 tig0010690:-19075 Msa1349310:five_prime_UTR
GCATGTCTCTAACAGCAAAA+CGG 0.600985 tig0010690:+18340 None:intergenic
AGACATTCTGAAGCGGTAGT+CGG 0.601657 tig0010690:+11143 None:intergenic
CTCCAAGGATGACCCAGCCA+AGG 0.604300 tig0010690:-10867 Msa1349310:CDS
GCGTTCATTCAAGTATGCCT+GGG 0.605879 tig0010690:-19545 Msa1349310:five_prime_UTR
GATGATTCCCACCAAGCCCA+TGG 0.606444 tig0010690:-18397 Msa1349310:five_prime_UTR
TCTCCCTCAAAACCAGAGAT+GGG 0.607478 tig0010690:+18996 None:intergenic
GATGATTCCCACCATGCCGA+TGG 0.607531 tig0010690:-10642 Msa1349310:CDS
GTCCAGGGATGGCCAGACCA+TGG 0.608617 tig0010690:-11816 Msa1349310:CDS
CATTCTGAAGCGGTAGTCGG+AGG 0.611063 tig0010690:+11146 None:intergenic
CTCAACCACCATCGGCATGG+TGG 0.611307 tig0010690:+10634 None:intergenic
TACTACACCCAAGTACTCCA+AGG 0.613862 tig0010690:-19099 Msa1349310:five_prime_UTR
GGTTCGTTACCTTGTGACGA+AGG 0.614137 tig0010690:+20591 None:intergenic
AAGTTTGTAGATCAGGTGAC+CGG 0.615425 tig0010690:+12126 None:intergenic
TCATTAAGAACATGATCACT+GGG 0.616929 tig0010690:-11904 Msa1349310:CDS
ACAGTAAAACGGCCAAGTGG+AGG 0.618271 tig0010690:+10596 None:intergenic
TATGAGTTGTGAAGAACGAA+CGG 0.620255 tig0010690:+20669 None:intergenic
TCACACCAAGAGTGAAAGCA+AGG 0.621193 tig0010690:+19284 None:intergenic
GTTCAGCCTTGAGCTTGTCA+AGG 0.621463 tig0010690:+12020 None:intergenic
GCTGTTAAGGATCTCAAGCG+TGG 0.622485 tig0010690:-18660 Msa1349310:five_prime_UTR
TTCAGTTGTCAGTCCAGTAG+GGG 0.622733 tig0010690:+18764 None:intergenic
CAAGGGTCCAACTCTTCTTG+AGG 0.623175 tig0010690:-18937 Msa1349310:five_prime_UTR
AGCCATTTCCAATCTGGCCA+GGG 0.623271 tig0010690:+18559 None:intergenic
GATGCACGATAAACCTATGG+TGG 0.623909 tig0010690:-11002 Msa1349310:CDS
GACAACTGAAGTCAAGTCTG+TGG 0.624055 tig0010690:-18751 Msa1349310:five_prime_UTR
AGACATCCTGTAGTGGTAGT+CGG 0.624076 tig0010690:+18868 None:intergenic
ACAGCAAAACGGCCGAGTGG+AGG 0.624787 tig0010690:+18351 None:intergenic
TTGACAAGCGTGTCATCGAG+AGG 0.625348 tig0010690:-19597 Msa1349310:five_prime_UTR
TGGTGTCATAAAACCTGGAA+TGG 0.625384 tig0010690:-18799 Msa1349310:five_prime_UTR
AGTCTCAACCACCATCGGCA+TGG 0.625823 tig0010690:+10631 None:intergenic
TCACGCCAAGAGTGAAAGCA+AGG 0.625940 tig0010690:+11783 None:intergenic
GCAGGATGATCTATTCACTT+GGG 0.628034 tig0010690:-18217 Msa1349310:exon
GTTCAGCCTTGAGCTTGTCA+AGG 0.628494 tig0010690:+19521 None:intergenic
GGAGATGCACGATAAACCTA+TGG 0.628686 tig0010690:-11005 Msa1349310:CDS
GTATGTTGCCTCAAACTCCA+AGG 0.633897 tig0010690:-18637 Msa1349310:five_prime_UTR
AAGCGTCAAACTGTGGCTGT+TGG 0.635052 tig0010690:-10566 Msa1349310:CDS
GACAGCTAAAGTCACGTCTG+TGG 0.638212 tig0010690:-11026 Msa1349310:CDS
CATCCTGTAGTGGTAGTCGG+AGG 0.640179 tig0010690:+18871 None:intergenic
CAGCAAACTTGACAGCAATG+TGG 0.640811 tig0010690:+18508 None:intergenic
AGAGAAAGTCTCAACCACCA+TGG 0.641605 tig0010690:+18380 None:intergenic
TTCTGGTAAGGAGATTGAGA+AGG 0.643722 tig0010690:-18460 Msa1349310:five_prime_UTR
GAATTGGAACTGTGCCTGTG+GGG 0.644316 tig0010690:-18833 Msa1349310:five_prime_UTR
AGTGGAATCAATGATGAGAA+CGG 0.644693 tig0010690:+19363 None:intergenic
TGTCTTGAAACCTGGAATGG+AGG 0.645931 tig0010690:-11071 Msa1349310:CDS
AACTTGTAGACATTCTGAAG+CGG 0.647943 tig0010690:+11136 None:intergenic
TGTGGCTGTTGGTGTCATCA+CGG 0.648036 tig0010690:-10555 Msa1349310:CDS
CAAGGATGACCCAGCCAAGG+AGG 0.648083 tig0010690:-10864 Msa1349310:CDS
AGTGAATAGATCATCCTGCT+CGG 0.649458 tig0010690:+18221 None:intergenic
TGACAGCAATGTGGGAGGTG+TGG 0.650950 tig0010690:+10762 None:intergenic
TGACAGCAATGTGGGAGGTG+TGG 0.650950 tig0010690:+18517 None:intergenic
GATGTTAAGGATCTCAAGAG+TGG 0.651493 tig0010690:-10905 Msa1349310:CDS
GATTCCCACCATGCCGATGG+TGG 0.651793 tig0010690:-10639 Msa1349310:CDS
TTTAGCTGTCAGTCCAGTAG+GGG 0.651902 tig0010690:+11039 None:intergenic
TTAAATCCCACATTGTCACC+AGG 0.657091 tig0010690:+18696 None:intergenic
ATCTTGTAGACATCCTGTAG+TGG 0.657887 tig0010690:+18861 None:intergenic
AATGATCTGCTGTTGCAACA+AGG 0.659392 tig0010690:-19257 Msa1349310:intron
CAGGGACAAGCGTCAAACTG+TGG 0.660617 tig0010690:-10573 Msa1349310:CDS
TTTGTAGATCAGGTGACCGG+TGG 0.660704 tig0010690:+12129 None:intergenic
CATCACACTTGACAGCAATG+TGG 0.661173 tig0010690:+10753 None:intergenic
AATGAAATCCCTGTGTCCGG+GGG 0.661737 tig0010690:+19423 None:intergenic
TCGCCGGGAAGGTACTCCGT+CGG 0.666337 tig0010690:+10956 None:intergenic
GAGAAGAAGGATCCCAGTGG+AGG 0.667988 tig0010690:-10527 Msa1349310:CDS
GAGAAGAAGGATCCCAGTGG+AGG 0.667988 tig0010690:-18282 Msa1349310:five_prime_UTR
AAAGGTTCACATCAACATTG+TGG 0.675059 tig0010690:-19686 Msa1349310:five_prime_UTR
GTCGTCGTCATGAATCACCC+TGG 0.677445 tig0010690:-10821 Msa1349310:CDS
ACTACACCCAAGTACTCCAA+GGG 0.678033 tig0010690:-19098 Msa1349310:five_prime_UTR
CTTGTAGATCAAGTGACCAG+TGG 0.682705 tig0010690:+19630 None:intergenic
GAAACCCTAGTTGAGTAGCA+AGG 0.685158 tig0010690:+20637 None:intergenic
TAGAGACATGCGTCAAACTG+TGG 0.690315 tig0010690:-18328 Msa1349310:five_prime_UTR
CTAACAGCAAAACGGCCGAG+TGG 0.692072 tig0010690:+18348 None:intergenic
AGGAATTGGAACTGTACCTG+TGG 0.693222 tig0010690:-11110 Msa1349310:CDS
AAACTTGACAGCAATGTGGG+AGG 0.695398 tig0010690:+18512 None:intergenic
GTAGATCAAGTGACCAGTGG+TGG 0.699002 tig0010690:+19633 None:intergenic
GTGATCATAATGAATCACCC+TGG 0.699056 tig0010690:-18576 Msa1349310:five_prime_UTR
CTGACAGTAAAACGGCCAAG+TGG 0.702953 tig0010690:+10593 None:intergenic
ACACTTGACAGCAATGTGGG+AGG 0.707816 tig0010690:+10757 None:intergenic
GATTCCCACCAAGCCCATGG+TGG 0.723849 tig0010690:-18394 Msa1349310:five_prime_UTR
GTGGAGAAGAAGGATCCCAG+TGG 0.734762 tig0010690:-10530 Msa1349310:CDS
GTGGAGAAGAAGGATCCCAG+TGG 0.734762 tig0010690:-18285 Msa1349310:five_prime_UTR
GGAATTGGAACTGTACCTGT+GGG 0.747552 tig0010690:-11109 Msa1349310:CDS
GCATCATGAAGCTCTCACAG+AGG 0.758446 tig0010690:-18724 Msa1349310:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATGATGATATATTAA+TGG + tig0010690:10992-11011 None:intergenic 10.0%
!! TAATCATATGTAAAATAAAT+AGG - tig0010690:13526-13545 Msa1349310:intron 10.0%
!! TAAATCAATATTATTTCATA+TGG + tig0010690:15036-15055 None:intergenic 10.0%
!! TTAACAAATTCTTATAAAAA+CGG + tig0010690:17003-17022 None:intergenic 10.0%
!!! CAAATTTTTTTATTTTGTTT+TGG - tig0010690:19676-19695 Msa1349310:five_prime_UTR 10.0%
!! TTATTATATACTTGTTTGTT+TGG - tig0010690:11029-11048 Msa1349310:CDS 15.0%
!!! TATTACTTAATTTGTTATGA+AGG - tig0010690:11139-11158 Msa1349310:CDS 15.0%
!! AATAAAATATACAACTTCAA+GGG + tig0010690:12051-12070 None:intergenic 15.0%
!! TAATAAAATATACAACTTCA+AGG + tig0010690:12052-12071 None:intergenic 15.0%
!! TATAAGAAAAAATTGAGTAT+GGG + tig0010690:13871-13890 None:intergenic 15.0%
!!! AGAACTTATCTTTTTTTTTT+TGG - tig0010690:13938-13957 Msa1349310:intron 15.0%
!!! TTCTAAATAGTTTTTCTTAT+AGG - tig0010690:15825-15844 Msa1349310:intron 15.0%
!!! TCTAAATAGTTTTTCTTATA+GGG - tig0010690:15826-15845 Msa1349310:intron 15.0%
!!! TTTTTCTCAAATGATAAAAA+AGG + tig0010690:16908-16927 None:intergenic 15.0%
!!! TTTTATTTACCCTAATTAAT+TGG - tig0010690:18337-18356 Msa1349310:five_prime_UTR 15.0%
!! AAGAAATTTATAAAAGGAAA+AGG + tig0010690:18454-18473 None:intergenic 15.0%
!! TTGTAGAAGAAATTTATAAA+AGG + tig0010690:18460-18479 None:intergenic 15.0%
!!! ACATTCAGTTTAAATTTTTA+TGG + tig0010690:19645-19664 None:intergenic 15.0%
!! ACAAAATAAAAAAATTTGTG+AGG + tig0010690:19674-19693 None:intergenic 15.0%
!! TAGGGTTTATATATAAACAA+GGG + tig0010690:10573-10592 None:intergenic 20.0%
!! GTATTACTTAATTCATGTTT+GGG - tig0010690:11161-11180 Msa1349310:CDS 20.0%
!!! TTAAAGTGAATTATGGATTA+TGG + tig0010690:11350-11369 None:intergenic 20.0%
!!! CATTAGTTTAAAGTGAATTA+TGG + tig0010690:11357-11376 None:intergenic 20.0%
!! ATAAAATATACAACTTCAAG+GGG + tig0010690:12050-12069 None:intergenic 20.0%
!!! TTATTTTTGTGTTTATTCCT+TGG - tig0010690:13261-13280 Msa1349310:intron 20.0%
!!! GTTTGGTTTGATATATAATA+GGG + tig0010690:13385-13404 None:intergenic 20.0%
!!! AGTTTGGTTTGATATATAAT+AGG + tig0010690:13386-13405 None:intergenic 20.0%
!!! TTGCAAGAGAAATTATTTTT+TGG - tig0010690:13562-13581 Msa1349310:intron 20.0%
!!! TTTTTCTAAAGAGAGATAAA+CGG + tig0010690:13844-13863 None:intergenic 20.0%
!! GTATAAGAAAAAATTGAGTA+TGG + tig0010690:13872-13891 None:intergenic 20.0%
!! TTTATTGTGTATTATTAGTC+AGG - tig0010690:15005-15024 Msa1349310:intron 20.0%
!! TTATTGTGTATTATTAGTCA+GGG - tig0010690:15006-15025 Msa1349310:intron 20.0%
!!! TTTTTTAATATAGAAGCTGA+AGG + tig0010690:16019-16038 None:intergenic 20.0%
!! GGAAATACATATGAAAATTA+AGG + tig0010690:16605-16624 None:intergenic 20.0%
!! AAAAAATCTCATTAATGAGT+TGG - tig0010690:16737-16756 Msa1349310:intron 20.0%
!! TATAAGATGAGAACTTTAAA+TGG - tig0010690:16786-16805 Msa1349310:intron 20.0%
!!! AATTTTGAAAATCAAAATGG+CGG + tig0010690:17154-17173 None:intergenic 20.0%
!!! TGCAATTTTGAAAATCAAAA+TGG + tig0010690:17157-17176 None:intergenic 20.0%
!!! ATTTTGATTTTCAAAATTGC+AGG - tig0010690:17156-17175 Msa1349310:intron 20.0%
!!! TTTTGATTTTCAAAATTGCA+GGG - tig0010690:17157-17176 Msa1349310:intron 20.0%
!!! GTTAATTTTTTCATCAACTT+AGG + tig0010690:17200-17219 None:intergenic 20.0%
!! ATAACAAAAAATGTTGAAGA+AGG - tig0010690:17284-17303 Msa1349310:intron 20.0%
!! TTTAACATATAGATCAGATA+AGG + tig0010690:17476-17495 None:intergenic 20.0%
!! TTGATGTTTAGATCAATAAT+TGG - tig0010690:17965-17984 Msa1349310:intron 20.0%
!! AAACAAATCCAAGAAATATT+CGG + tig0010690:18204-18223 None:intergenic 20.0%
!!! TCATTTAACATGTGTTTTTT+GGG - tig0010690:18283-18302 Msa1349310:five_prime_UTR 20.0%
!! TAATTAGGGTAAATAAAACA+TGG + tig0010690:18335-18354 None:intergenic 20.0%
!! GATGAAATTAAAATTTGTGA+AGG + tig0010690:18421-18440 None:intergenic 20.0%
!! AAAAGAAACCTTTGTAAAAA+AGG + tig0010690:18497-18516 None:intergenic 20.0%
!! TTATCTAGAGATAATATGAA+TGG - tig0010690:18522-18541 Msa1349310:five_prime_UTR 20.0%
!! TGAACACTAAAAAAAACATT+CGG - tig0010690:18912-18931 Msa1349310:five_prime_UTR 20.0%
!!! CTTACTTTTATTTTTCTCTT+TGG - tig0010690:18989-19008 Msa1349310:five_prime_UTR 20.0%
!!! TATTGTTTTCTTTGTTGAAT+TGG - tig0010690:19025-19044 Msa1349310:five_prime_UTR 20.0%
!! CAAAATTCGCTATATTTATA+GGG + tig0010690:19614-19633 None:intergenic 20.0%
!! TCAAAATTCGCTATATTTAT+AGG + tig0010690:19615-19634 None:intergenic 20.0%
! GTAGGGTTTATATATAAACA+AGG + tig0010690:10574-10593 None:intergenic 25.0%
! TTGAGAAGAAAAGATATTGA+AGG + tig0010690:10710-10729 None:intergenic 25.0%
! ATGATGATATATTAATGGCA+TGG + tig0010690:10987-11006 None:intergenic 25.0%
! TTTGTTTGGTATTCAATCAT+TGG - tig0010690:11043-11062 Msa1349310:CDS 25.0%
! TGTGTTCATACTTATGTATA+TGG - tig0010690:11094-11113 Msa1349310:CDS 25.0%
! GTGTTCATACTTATGTATAT+GGG - tig0010690:11095-11114 Msa1349310:CDS 25.0%
! TGTTCATACTTATGTATATG+GGG - tig0010690:11096-11115 Msa1349310:CDS 25.0%
! GGTATTACTTAATTCATGTT+TGG - tig0010690:11160-11179 Msa1349310:CDS 25.0%
!! CCATAAAGATTTTATGCAAT+GGG - tig0010690:11252-11271 Msa1349310:intron 25.0%
!! CATAAAGATTTTATGCAATG+GGG - tig0010690:11253-11272 Msa1349310:intron 25.0%
! TAGATATGATGAAATTGTGA+AGG - tig0010690:12190-12209 Msa1349310:CDS 25.0%
!!! AACTTGTTACTAAGATTGAT+AGG - tig0010690:12780-12799 Msa1349310:intron 25.0%
! TTATATATCAAACCAAACTC+AGG - tig0010690:13387-13406 Msa1349310:intron 25.0%
! TAATAGTTTGAATTGAACCA+AGG + tig0010690:13485-13504 None:intergenic 25.0%
! ATGTAAAATAAATAGGATCC+AGG - tig0010690:13533-13552 Msa1349310:intron 25.0%
! ACTAAGAGAAATAAATGTAG+TGG + tig0010690:13633-13652 None:intergenic 25.0%
! TAGTGACAATGAACAAAAAT+AGG - tig0010690:13649-13668 Msa1349310:intron 25.0%
!!! TAGTTTTGATCTCATTATTC+AGG + tig0010690:13684-13703 None:intergenic 25.0%
!! TAGAACTATGATTAGCTATT+TGG + tig0010690:13795-13814 None:intergenic 25.0%
!! TAGTTCTATCAAATTGTTTC+TGG - tig0010690:13807-13826 Msa1349310:intron 25.0%
!!! TTTTCTAAAGAGAGATAAAC+GGG + tig0010690:13843-13862 None:intergenic 25.0%
!!! TCTCTCAGTAATTTTTTTAG+AGG - tig0010690:14009-14028 Msa1349310:intron 25.0%
!!! ATGGTCTTATTAGGTTTTTT+TGG - tig0010690:14324-14343 Msa1349310:intron 25.0%
! AAAATCGGTCTTTAAATAAG+AGG - tig0010690:14369-14388 Msa1349310:intron 25.0%
! AAAATGAATATGTTGTGGAA+TGG + tig0010690:14737-14756 None:intergenic 25.0%
! CTAGTAAAATGAATATGTTG+TGG + tig0010690:14742-14761 None:intergenic 25.0%
!! CACAACATATTCATTTTACT+AGG - tig0010690:14740-14759 Msa1349310:intron 25.0%
!! AACATATTCATTTTACTAGG+AGG - tig0010690:14743-14762 Msa1349310:intron 25.0%
! AAGCATTTCAACTATTATAG+AGG + tig0010690:14795-14814 None:intergenic 25.0%
!!! TTTAGTTTGTTTTTGCTGTT+TGG - tig0010690:14897-14916 Msa1349310:intron 25.0%
! TATAAAGCTCATAAAATAGC+TGG + tig0010690:15140-15159 None:intergenic 25.0%
! TTTCTCATGATAGTACTAAA+TGG + tig0010690:15389-15408 None:intergenic 25.0%
!! TTGAAGAAAGTGTAAACATT+CGG - tig0010690:15414-15433 Msa1349310:intron 25.0%
! TGATAATTACTCTATCATGA+AGG + tig0010690:15500-15519 None:intergenic 25.0%
! AAATGAGTAATTACAATCAC+CGG - tig0010690:15742-15761 Msa1349310:intron 25.0%
! TCAATCGTTTAGTTATTTAC+CGG + tig0010690:15764-15783 None:intergenic 25.0%
! AACGATTGATATATCTGATA+TGG - tig0010690:15775-15794 Msa1349310:intron 25.0%
! AAGTCATAAAATACCAATGA+AGG - tig0010690:15870-15889 Msa1349310:intron 25.0%
! AAAGATACTTCAACTTACTT+TGG + tig0010690:15970-15989 None:intergenic 25.0%
! CTAGCAAAATGAATATGTTT+GGG - tig0010690:16573-16592 Msa1349310:intron 25.0%
! TAGCAAAATGAATATGTTTG+GGG - tig0010690:16574-16593 Msa1349310:intron 25.0%
!!! AGGAGTTTTATCTTCAATTT+TGG - tig0010690:16659-16678 Msa1349310:intron 25.0%
! GGATTACTCAAAGTTTAATA+TGG + tig0010690:17133-17152 None:intergenic 25.0%
! AAAAAATGTTGAAGAAGGTT+TGG - tig0010690:17289-17308 Msa1349310:intron 25.0%
!! TTTGAAATGACAAATCAAGT+TGG + tig0010690:17574-17593 None:intergenic 25.0%
! GGAAAAAAGCAATATGTTTA+GGG + tig0010690:17922-17941 None:intergenic 25.0%
! GTTTAGATCAATAATTGGAA+TGG - tig0010690:17970-17989 Msa1349310:intron 25.0%
! ACACACAAACTTCTATAAAT+TGG + tig0010690:18038-18057 None:intergenic 25.0%
!! TCAAGTACAATATTTTTCTG+TGG + tig0010690:18094-18113 None:intergenic 25.0%
! TATATAGTCCGAATATTTCT+TGG - tig0010690:18193-18212 Msa1349310:CDS 25.0%
!! GAATATTTCTTGGATTTGTT+TGG - tig0010690:18203-18222 Msa1349310:CDS 25.0%
!!! CTCATTTAACATGTGTTTTT+TGG - tig0010690:18282-18301 Msa1349310:five_prime_UTR 25.0%
! TAAATAAAACATGGTCAAAG+TGG + tig0010690:18326-18345 None:intergenic 25.0%
! TGTTGAAGCAAATATGATTT+AGG - tig0010690:18575-18594 Msa1349310:five_prime_UTR 25.0%
! GTTGAAGCAAATATGATTTA+GGG - tig0010690:18576-18595 Msa1349310:five_prime_UTR 25.0%
! AATACTCTATGATCTCAATT+AGG - tig0010690:18797-18816 Msa1349310:five_prime_UTR 25.0%
! ATACTCTATGATCTCAATTA+GGG - tig0010690:18798-18817 Msa1349310:five_prime_UTR 25.0%
! AAATATACATTTGACAAGAG+AGG + tig0010690:18941-18960 None:intergenic 25.0%
! AAGATTAACATTGTTCTCAT+TGG - tig0010690:19087-19106 Msa1349310:five_prime_UTR 25.0%
!! TAATGAAATTTTTGTGTCCA+GGG + tig0010690:19347-19366 None:intergenic 25.0%
!! TTAATGAAATTTTTGTGTCC+AGG + tig0010690:19348-19367 None:intergenic 25.0%
! AAATATGCATCTTCTTCAAA+GGG + tig0010690:19555-19574 None:intergenic 25.0%
! ACATTCATATGAACATTAAG+TGG + tig0010690:19712-19731 None:intergenic 25.0%
! GATATTGAAGGATTTAGAGT+TGG + tig0010690:10698-10717 None:intergenic 30.0%
!! TGAACTTTTGAAAGAGTTGA+TGG - tig0010690:10918-10937 Msa1349310:CDS 30.0%
GGCTAACAAATATATGTCAA+AGG + tig0010690:11234-11253 None:intergenic 30.0%
! GCCATAAAGATTTTATGCAA+TGG - tig0010690:11251-11270 Msa1349310:intron 30.0%
CCCATTGCATAAAATCTTTA+TGG + tig0010690:11255-11274 None:intergenic 30.0%
! AATTATGGATTATGGAGATG+CGG + tig0010690:11342-11361 None:intergenic 30.0%
! GTTTTCTGTGCTGAAAATAA+TGG - tig0010690:11509-11528 Msa1349310:intron 30.0%
TTTAAGCTCTTAAGTCCAAA+TGG - tig0010690:11549-11568 Msa1349310:intron 30.0%
TTAAGCTCTTAAGTCCAAAT+GGG - tig0010690:11550-11569 Msa1349310:intron 30.0%
TTCATTAAGAACATGATCAC+CGG - tig0010690:11859-11878 Msa1349310:CDS 30.0%
AATTTCATCATATCTACCCT+TGG + tig0010690:12186-12205 None:intergenic 30.0%
AGTTTCATCCTATTTGAAGA+AGG - tig0010690:12214-12233 Msa1349310:CDS 30.0%
! GAACAAATGGAATTTTGTCT+GGG + tig0010690:12250-12269 None:intergenic 30.0%
TCACCATTCTTCAAGAATTT+GGG + tig0010690:12833-12852 None:intergenic 30.0%
ATCACCATTCTTCAAGAATT+TGG + tig0010690:12834-12853 None:intergenic 30.0%
AAAACTTAAACATCACACCA+AGG + tig0010690:13281-13300 None:intergenic 30.0%
!! TGTGATGTTTAAGTTTTTGC+TGG - tig0010690:13284-13303 Msa1349310:intron 30.0%
!! GTGATGTTTAAGTTTTTGCT+GGG - tig0010690:13285-13304 Msa1349310:intron 30.0%
!! TGATGTTTAAGTTTTTGCTG+GGG - tig0010690:13286-13305 Msa1349310:intron 30.0%
AAAAATGATCCTGACATTCT+AGG + tig0010690:13344-13363 None:intergenic 30.0%
ATATAATAGGGTAAACGATC+AGG + tig0010690:13373-13392 None:intergenic 30.0%
ATTTAACCAAGATGACTTTG+TGG - tig0010690:13434-13453 Msa1349310:intron 30.0%
TTTCTCTTGCAAAATAATCC+TGG + tig0010690:13554-13573 None:intergenic 30.0%
! AACTATGATTAGCTATTTGG+TGG + tig0010690:13792-13811 None:intergenic 30.0%
! TTTCTAAAGAGAGATAAACG+GGG + tig0010690:13842-13861 None:intergenic 30.0%
CTTTACATGACAATTCACAA+TGG - tig0010690:14305-14324 Msa1349310:intron 30.0%
!! CAATTCACAATGGTCTTATT+AGG - tig0010690:14315-14334 Msa1349310:intron 30.0%
!!! GATATCCTTTTTTCTATCGT+CGG + tig0010690:14452-14471 None:intergenic 30.0%
ACTTTGTAGGCATTATGAAA+TGG + tig0010690:14520-14539 None:intergenic 30.0%
TTCATAATGCCTACAAAGTT+TGG - tig0010690:14521-14540 Msa1349310:intron 30.0%
GAGATCAAACTAACTTCAAA+CGG + tig0010690:14562-14581 None:intergenic 30.0%
CATCTTATATATCTTGACAC+TGG - tig0010690:14583-14602 Msa1349310:intron 30.0%
GTAAAATCTCATCAATGAGT+TGG + tig0010690:14621-14640 None:intergenic 30.0%
! ACCATTTGAAGCAATACAAA+TGG - tig0010690:14642-14661 Msa1349310:intron 30.0%
TCCATTTGTATTGCTTCAAA+TGG + tig0010690:14646-14665 None:intergenic 30.0%
ATGATGTGTGGAAATACATA+TGG - tig0010690:14701-14720 Msa1349310:intron 30.0%
CAACTATTATAGAGGTGATT+GGG + tig0010690:14787-14806 None:intergenic 30.0%
TCAACTATTATAGAGGTGAT+TGG + tig0010690:14788-14807 None:intergenic 30.0%
!!! TTTTTGCTGTTTGGAATGTA+TGG - tig0010690:14906-14925 Msa1349310:intron 30.0%
CAACAGACATGATATACTTT+AGG + tig0010690:14984-15003 None:intergenic 30.0%
!! AAAACTGAATAAAGGCATCA+AGG + tig0010690:15246-15265 None:intergenic 30.0%
TCAAGCAGAAAACTGAATAA+AGG + tig0010690:15254-15273 None:intergenic 30.0%
TATTCCTTATTCCTAAGTTG+AGG - tig0010690:15282-15301 Msa1349310:intron 30.0%
AATACCTCAACTTAGGAATA+AGG + tig0010690:15289-15308 None:intergenic 30.0%
CACGAGACTTAATGATATTA+TGG - tig0010690:15905-15924 Msa1349310:intron 30.0%
!! TAGTTTATGCCATAGTTTTG+AGG - tig0010690:16190-16209 Msa1349310:intron 30.0%
TATCCCTATGTTATAGTTTG+TGG + tig0010690:16338-16357 None:intergenic 30.0%
AACCAAACTAACTTAGGAAA+GGG - tig0010690:16464-16483 Msa1349310:intron 30.0%
! AACATATTCATTTTGCTAGG+AGG + tig0010690:16572-16591 None:intergenic 30.0%
! CCAAACATATTCATTTTGCT+AGG + tig0010690:16575-16594 None:intergenic 30.0%
CCTAGCAAAATGAATATGTT+TGG - tig0010690:16572-16591 Msa1349310:intron 30.0%
AAAATGAATATGTTTGGGGA+TGG - tig0010690:16578-16597 Msa1349310:intron 30.0%
TAAAACTCCTCGAGAATAAA+TGG + tig0010690:16649-16668 None:intergenic 30.0%
! CATTTGAAGCAATACAGATT+CGG + tig0010690:16715-16734 None:intergenic 30.0%
AGATGAGAACTTTAAATGGT+TGG - tig0010690:16790-16809 Msa1349310:intron 30.0%
!! ATTGTCCTCTAAAGTATGAA+TGG - tig0010690:16854-16873 Msa1349310:intron 30.0%
! TTTCAGTTATTTCCATTACC+TGG + tig0010690:17110-17129 None:intergenic 30.0%
!!! CTCACATCTAATTAGTTTTG+AGG - tig0010690:17219-17238 Msa1349310:intron 30.0%
TAATACAACTGTGTGAAACA+AGG - tig0010690:17411-17430 Msa1349310:intron 30.0%
GTAAAACACACAAAAGATCA+TGG - tig0010690:17433-17452 Msa1349310:intron 30.0%
!! ATCTTTGAAATATCCGACTA+AGG - tig0010690:17542-17561 Msa1349310:intron 30.0%
! ACTATACCGACTAAATATCA+AGG - tig0010690:17593-17612 Msa1349310:intron 30.0%
TCATGTCCTTGATATTTAGT+CGG + tig0010690:17602-17621 None:intergenic 30.0%
! ATGTTTAGGGTTCATATTGA+TGG + tig0010690:17909-17928 None:intergenic 30.0%
GGGAAAAAAGCAATATGTTT+AGG + tig0010690:17923-17942 None:intergenic 30.0%
TTGGAATGGTCATGATTATT+TGG - tig0010690:17984-18003 Msa1349310:intron 30.0%
TTATAGAAGTTTGTGTGTCA+TGG - tig0010690:18040-18059 Msa1349310:intron 30.0%
GCTAAAACTCATACTTTGTA+GGG + tig0010690:18151-18170 None:intergenic 30.0%
TGCTAAAACTCATACTTTGT+AGG + tig0010690:18152-18171 None:intergenic 30.0%
GTGTAACGACCAATTAATTA+GGG + tig0010690:18349-18368 None:intergenic 30.0%
AGTGTAACGACCAATTAATT+AGG + tig0010690:18350-18369 None:intergenic 30.0%
!! AGGATGAGAAGGTATTTATA+GGG + tig0010690:18401-18420 None:intergenic 30.0%
!! AAGGATGAGAAGGTATTTAT+AGG + tig0010690:18402-18421 None:intergenic 30.0%
AAAATTTGTGAAGGATGAGA+AGG + tig0010690:18412-18431 None:intergenic 30.0%
!!! ACCATTGACCTTTTTTACAA+AGG - tig0010690:18486-18505 Msa1349310:five_prime_UTR 30.0%
ACCTTTGTAAAAAAGGTCAA+TGG + tig0010690:18490-18509 None:intergenic 30.0%
CAGAAAGGCAACAAAAAAAA+AGG + tig0010690:18647-18666 None:intergenic 30.0%
!! CGCTGTATTTTTAAATTTCG+TGG - tig0010690:18732-18751 Msa1349310:five_prime_UTR 30.0%
!! ATTCAAAGGCATTAAATAGC+AGG + tig0010690:18840-18859 None:intergenic 30.0%
! CAGATCTTTTTGTGTTTTCA+AGG - tig0010690:19048-19067 Msa1349310:five_prime_UTR 30.0%
!! TTTGTGTTTTCAAGGACAAA+TGG - tig0010690:19056-19075 Msa1349310:five_prime_UTR 30.0%
!! TTGTGTTTTCAAGGACAAAT+GGG - tig0010690:19057-19076 Msa1349310:five_prime_UTR 30.0%
TTCATTAAGAACATGATCAC+TGG - tig0010690:11859-11878 Msa1349310:CDS 30.0%
TCATTAAGAACATGATCACT+GGG - tig0010690:19361-19380 Msa1349310:five_prime_UTR 30.0%
CAAATATGCATCTTCTTCAA+AGG + tig0010690:19556-19575 None:intergenic 30.0%
TGAACATTAAGTGGTCATTA+AGG + tig0010690:19703-19722 None:intergenic 30.0%
AGTTTCATCCTATTTGAAGA+AGG - tig0010690:12214-12233 Msa1349310:CDS 30.0%
CGTACTCTGGATTATTTAGA+TGG + tig0010690:10539-10558 None:intergenic 35.0%
GGTTTATAAACTACGTACTC+TGG + tig0010690:10552-10571 None:intergenic 35.0%
TATGAGTTGTGAAGAACGAA+CGG + tig0010690:10599-10618 None:intergenic 35.0%
!! ACCATCATCGATTCATTCAT+AGG - tig0010690:10751-10770 Msa1349310:CDS 35.0%
ACCTATGAATGAATCGATGA+TGG + tig0010690:10755-10774 None:intergenic 35.0%
! TTGGTATTCAATCATTGGCT+TGG - tig0010690:11048-11067 Msa1349310:CDS 35.0%
! GGGTTTTCTATCTGTTATGA+AGG - tig0010690:11116-11135 Msa1349310:CDS 35.0%
! ATTATGGATTATGGAGATGC+GGG + tig0010690:11341-11360 None:intergenic 35.0%
TATTTCAGCAGATATAGAGC+AGG + tig0010690:11403-11422 None:intergenic 35.0%
TCTGCTGAAATATAGTGACA+TGG - tig0010690:11411-11430 Msa1349310:intron 35.0%
AAAGGTTCACATCAACATTG+TGG - tig0010690:11579-11598 Msa1349310:intron 35.0%
AGTGGAATCAATGATGAGAA+CGG + tig0010690:11905-11924 None:intergenic 35.0%
!!! TTTTGAAGCCGGTATTTCTA+AGG - tig0010690:11933-11952 Msa1349310:CDS 35.0%
ATCCATCTGTTCAAGATAGA+TGG + tig0010690:12144-12163 None:intergenic 35.0%
TCATCCTATTTGAAGAAGGT+TGG - tig0010690:12218-12237 Msa1349310:intron 35.0%
ATAGCCAACCTTCTTCAAAT+AGG + tig0010690:12225-12244 None:intergenic 35.0%
! GGAACAAATGGAATTTTGTC+TGG + tig0010690:12251-12270 None:intergenic 35.0%
! TGTCAAGAATGTTGCTGTTA+AGG - tig0010690:12592-12611 Msa1349310:intron 35.0%
GATCACTTGAGATGTAAAGT+TGG + tig0010690:12675-12694 None:intergenic 35.0%
GAACAAAAGCTATGAGATGA+AGG + tig0010690:13094-13113 None:intergenic 35.0%
! ATAGCTTTTGTTCTCAGAAC+TGG - tig0010690:13101-13120 Msa1349310:intron 35.0%
! TAGCTTTTGTTCTCAGAACT+GGG - tig0010690:13102-13121 Msa1349310:intron 35.0%
ATATTGTTGCCTAGAATGTC+AGG - tig0010690:13332-13351 Msa1349310:intron 35.0%
AGTTTATTGTTGCCTGAGTT+TGG + tig0010690:13402-13421 None:intergenic 35.0%
AGTCATCTTGGTTAAATAGC+AGG + tig0010690:13431-13450 None:intergenic 35.0%
GGTCCATCAATTTCATAGTT+GGG + tig0010690:13612-13631 None:intergenic 35.0%
TGGTCCATCAATTTCATAGT+TGG + tig0010690:13613-13632 None:intergenic 35.0%
!! CCTTAACTCTAAGTTTGTTG+TGG + tig0010690:13739-13758 None:intergenic 35.0%
CCACAACAAACTTAGAGTTA+AGG - tig0010690:13736-13755 Msa1349310:intron 35.0%
! TGATTAGCTATTTGGTGGAT+TGG + tig0010690:13787-13806 None:intergenic 35.0%
GTGAATTGTCATGTAAAGCT+AGG + tig0010690:14303-14322 None:intergenic 35.0%
GTCAGACTTTATTCAACGTA+AGG - tig0010690:14413-14432 Msa1349310:intron 35.0%
TTTCTCCGACGATAGAAAAA+AGG - tig0010690:14444-14463 Msa1349310:intron 35.0%
TCAAACTAACTTCAAACGGT+TGG + tig0010690:14558-14577 None:intergenic 35.0%
!! TATATCTTGACACTGGTTCT+TGG - tig0010690:14590-14609 Msa1349310:intron 35.0%
ATGTATGGATTTCCTTTGAC+AGG - tig0010690:14921-14940 Msa1349310:intron 35.0%
ATTCACTTCATTCCTGTCAA+AGG + tig0010690:14936-14955 None:intergenic 35.0%
!! CTTCTGAAATACCTCAACTT+AGG + tig0010690:15296-15315 None:intergenic 35.0%
! CTAAGTTGAGGTATTTCAGA+AGG - tig0010690:15294-15313 Msa1349310:intron 35.0%
TAGTACTAAATGGAGGAGTA+AGG + tig0010690:15379-15398 None:intergenic 35.0%
CTCATGATAGTACTAAATGG+AGG + tig0010690:15386-15405 None:intergenic 35.0%
ATAAGCGATGTAGCAAGTTT+AGG + tig0010690:15555-15574 None:intergenic 35.0%
!!! CATGACTCTTATTTTTCGCT+TGG - tig0010690:15599-15618 Msa1349310:intron 35.0%
! TACTGCATCCATTGTTGTTA+TGG - tig0010690:15654-15673 Msa1349310:intron 35.0%
GTTTCCAACCATAACAACAA+TGG + tig0010690:15665-15684 None:intergenic 35.0%
TGTTGTTATGGTTGGAAACA+AGG - tig0010690:15666-15685 Msa1349310:intron 35.0%
! TGGTTGGAAACAAGGTATTA+TGG - tig0010690:15674-15693 Msa1349310:intron 35.0%
! TTGGAAACAAGGTATTATGG+TGG - tig0010690:15677-15696 Msa1349310:intron 35.0%
! TGGAAACAAGGTATTATGGT+GGG - tig0010690:15678-15697 Msa1349310:intron 35.0%
CACAAAAGGACTTCATACAT+AGG - tig0010690:15706-15725 Msa1349310:intron 35.0%
TAAGTCTCGTGCTAAAAAGA+GGG + tig0010690:15896-15915 None:intergenic 35.0%
TTAAGTCTCGTGCTAAAAAG+AGG + tig0010690:15897-15916 None:intergenic 35.0%
! TTACTTTGGTTTCATCGTCT+CGG + tig0010690:15956-15975 None:intergenic 35.0%
AAACTAAATGTTGATGCAGC+AGG + tig0010690:16176-16195 None:intergenic 35.0%
TGGAAATCTCCTCAAAACTA+TGG + tig0010690:16202-16221 None:intergenic 35.0%
! TTTTTCACAATCACTTCCAC+CGG - tig0010690:16274-16293 Msa1349310:intron 35.0%
GCTTGAACTGAAAGATATAC+CGG + tig0010690:16296-16315 None:intergenic 35.0%
GTTCAAGCATTTCCTATTTC+TGG - tig0010690:16308-16327 Msa1349310:intron 35.0%
! CCTATGTTATAGTTTGTGGT+GGG + tig0010690:16334-16353 None:intergenic 35.0%
CCACCACAAACTATAACATA+GGG - tig0010690:16332-16351 Msa1349310:intron 35.0%
!! GAAGGTGATTTTAGCACTTT+TGG + tig0010690:16410-16429 None:intergenic 35.0%
GAAGAGAACCAAACTAACTT+AGG - tig0010690:16458-16477 Msa1349310:intron 35.0%
GAACCAAACTAACTTAGGAA+AGG - tig0010690:16463-16482 Msa1349310:intron 35.0%
! ATTGACCACGCTTTTATGTT+GGG + tig0010690:16491-16510 None:intergenic 35.0%
! TATTGACCACGCTTTTATGT+TGG + tig0010690:16492-16511 None:intergenic 35.0%
!! TGAAGTCATGTTTGTTGTCT+CGG + tig0010690:16527-16546 None:intergenic 35.0%
ATAAGAGTAGCAGTGAAGTA+TGG + tig0010690:16626-16645 None:intergenic 35.0%
CTCTTATCCATTTATTCTCG+AGG - tig0010690:16639-16658 Msa1349310:intron 35.0%
CGAATCTGTATTGCTTCAAA+TGG - tig0010690:16713-16732 Msa1349310:intron 35.0%
CATCTTATATCTCATGACAC+TGG + tig0010690:16775-16794 None:intergenic 35.0%
! ACTTTAAATGGTTGGTTACG+AGG - tig0010690:16798-16817 Msa1349310:intron 35.0%
!! TCCTCTAAAGTATGAATGGT+AGG - tig0010690:16858-16877 Msa1349310:intron 35.0%
AAAGGATATCTCTAGACTGT+AGG + tig0010690:16890-16909 None:intergenic 35.0%
AAAATATATCGCGTTCTACC+AGG - tig0010690:17089-17108 Msa1349310:intron 35.0%
TGAGGTTGAGTTAGAAAGAT+CGG - tig0010690:17237-17256 Msa1349310:intron 35.0%
ACACACAAAAGATCATGGAT+CGG - tig0010690:17438-17457 Msa1349310:intron 35.0%
! CAAAAAAGTTTGATTCGACC+AGG + tig0010690:17519-17538 None:intergenic 35.0%
CTGGACATTTATAGTTGAGT+CGG - tig0010690:17646-17665 Msa1349310:intron 35.0%
ACATTTATAGTTGAGTCGGT+CGG - tig0010690:17650-17669 Msa1349310:intron 35.0%
TCGTTCATGAGCTTCATAAT+TGG - tig0010690:17755-17774 Msa1349310:intron 35.0%
TTTCCCATTGTAGTAAACTG+CGG - tig0010690:17937-17956 Msa1349310:intron 35.0%
! ATGGTCATGATTATTTGGTG+TGG - tig0010690:17989-18008 Msa1349310:intron 35.0%
TCGGACTATATAACCTGAAT+TGG + tig0010690:18185-18204 None:intergenic 35.0%
!! GGATGAGAAGGTATTTATAG+GGG + tig0010690:18400-18419 None:intergenic 35.0%
TCAACAAAATCTAGAGAGTG+AGG + tig0010690:18561-18580 None:intergenic 35.0%
TAGAAAAAGATGAGTCTACG+TGG - tig0010690:18609-18628 Msa1349310:five_prime_UTR 35.0%
ACTGTGAAACTTGATAGACA+AGG - tig0010690:18879-18898 Msa1349310:five_prime_UTR 35.0%
!! TTTTCAAGGACAAATGGGTA+AGG - tig0010690:19062-19081 Msa1349310:five_prime_UTR 35.0%
CTTCGAGTAAGAAATGTCAA+TGG + tig0010690:19286-19305 None:intergenic 35.0%
CTTATCCTTGATTCCTGTAT+TGG - tig0010690:19408-19427 Msa1349310:five_prime_UTR 35.0%
!! TTTTTGCTATCTTGAGCAGA+TGG - tig0010690:19869-19888 Msa1349310:intron 35.0%
TCATCCTATTTGAAGAAGGT+TGG - tig0010690:12218-12237 Msa1349310:intron 35.0%
ATAGCCAACCTTCTTCAAAT+AGG + tig0010690:12225-12244 None:intergenic 35.0%
! GAACAAATGGAACGTTTTCT+GGG + tig0010690:19974-19993 None:intergenic 35.0%
! AACTTGTAGACATTCTGAAG+CGG + tig0010690:20132-20151 None:intergenic 35.0%
CTTCAGAATGTCTACAAGTT+TGG - tig0010690:20132-20151 Msa1349310:intron 35.0%
ATTAAATCTCACATAGTCGC+CGG + tig0010690:20328-20347 None:intergenic 35.0%
TGTTGAGAACGTTGATGTTA+AGG - tig0010690:20347-20366 Msa1349310:intron 35.0%
GACTTGAGATGTAAAGTTAG+CGG + tig0010690:20427-20446 None:intergenic 35.0%
!! AGCTTGTTACCAAGATTGAT+AGG - tig0010690:20535-20554 Msa1349310:intron 35.0%
TCACCATTCATCAGGAATTT+GGG + tig0010690:20588-20607 None:intergenic 35.0%
ATCACCATTCATCAGGAATT+TGG + tig0010690:20589-20608 None:intergenic 35.0%
TCATTCCTTGCTACTCAACT+AGG - tig0010690:10623-10642 Msa1349310:CDS 40.0%
CATTCCTTGCTACTCAACTA+GGG - tig0010690:10624-10643 Msa1349310:CDS 40.0%
! TTATGGATTATGGAGATGCG+GGG + tig0010690:11340-11359 None:intergenic 40.0%
CTCTTAAGTCCAAATGGGTA+AGG - tig0010690:11555-11574 Msa1349310:intron 40.0%
AGTCCAAATGGGTAAGGAAA+AGG - tig0010690:11561-11580 Msa1349310:intron 40.0%
! GAACCTTTTCCTTACCCATT+TGG + tig0010690:11567-11586 None:intergenic 40.0%
CACATCAACATTGTGGTCAT+TGG - tig0010690:11586-11605 Msa1349310:intron 40.0%
AATGACAGTGCAGTAGTACT+TGG + tig0010690:11818-11837 None:intergenic 40.0%
TTAATGAAATCCCTGTGTCC+GGG + tig0010690:11847-11866 None:intergenic 40.0%
CTTAATGAAATCCCTGTGTC+CGG + tig0010690:11848-11867 None:intergenic 40.0%
!! CTCATCATTGATTCCACTAC+TGG - tig0010690:11907-11926 Msa1349310:CDS 40.0%
!! ATCATTGATTCCACTACTGG+TGG - tig0010690:11910-11929 Msa1349310:CDS 40.0%
CTGACCATCCTTAGAAATAC+CGG + tig0010690:11944-11963 None:intergenic 40.0%
AATGATCTGCTGTTGCAACA+AGG - tig0010690:12008-12027 Msa1349310:intron 40.0%
TGCCATCTATCTTGAACAGA+TGG - tig0010690:12139-12158 Msa1349310:CDS 40.0%
! TATCTACCCTTGGAGTACTT+GGG + tig0010690:12176-12195 None:intergenic 40.0%
! ATATCTACCCTTGGAGTACT+TGG + tig0010690:12177-12196 None:intergenic 40.0%
ATTCCATTTGTTCCCATCTC+TGG - tig0010690:12257-12276 Msa1349310:intron 40.0%
AAACCAGAGATGGGAACAAA+TGG + tig0010690:12263-12282 None:intergenic 40.0%
TACAAACCTTGACTGGTACA+AGG - tig0010690:12310-12329 Msa1349310:intron 40.0%
ACAAACCTTGACTGGTACAA+GGG - tig0010690:12311-12330 Msa1349310:intron 40.0%
!! AGGCTCATTGATTTGGTCAA+GGG + tig0010690:12354-12373 None:intergenic 40.0%
!! TAGGCTCATTGATTTGGTCA+AGG + tig0010690:12355-12374 None:intergenic 40.0%
ACCAAATCAATGAGCCTAAG+AGG - tig0010690:12357-12376 Msa1349310:intron 40.0%
ATCTTGTAGACATCCTGTAG+TGG + tig0010690:12407-12426 None:intergenic 40.0%
CTACAGGATGTCTACAAGAT+TGG - tig0010690:12407-12426 Msa1349310:intron 40.0%
GTCTACAAGATTGGAGGAAT+TGG - tig0010690:12416-12435 Msa1349310:intron 40.0%
!! TGGTGTCATAAAACCTGGAA+TGG - tig0010690:12466-12485 Msa1349310:intron 40.0%
TTAAATCCCACATTGTCACC+AGG + tig0010690:12572-12591 None:intergenic 40.0%
TGTAAAGTTGGCAGATTCCT+TGG + tig0010690:12663-12682 None:intergenic 40.0%
GTGATCATAATGAATCACCC+TGG - tig0010690:12689-12708 Msa1349310:intron 40.0%
AGCAAACTTGACAGCAATGT+GGG + tig0010690:12759-12778 None:intergenic 40.0%
ACTAAGATTGATAGGCGTTC+TGG - tig0010690:12788-12807 Msa1349310:intron 40.0%
TTCTGGTAAGGAGATTGAGA+AGG - tig0010690:12805-12824 Msa1349310:intron 40.0%
GAGCCCAAATTCTTGAAGAA+TGG - tig0010690:12827-12846 Msa1349310:intron 40.0%
! TTCTTGAAGAATGGTGATGC+TGG - tig0010690:12836-12855 Msa1349310:intron 40.0%
TTCTCTGAATATCCTCCACT+CGG - tig0010690:12902-12921 Msa1349310:intron 40.0%
GCATGTCTCTAACAGCAAAA+CGG + tig0010690:12928-12947 None:intergenic 40.0%
! CTTCTTCTTCAATGCTGACT+TGG + tig0010690:13020-13039 None:intergenic 40.0%
AGTGAATAGATCATCCTGCT+CGG + tig0010690:13047-13066 None:intergenic 40.0%
AGCAGGATGATCTATTCACT+TGG - tig0010690:13047-13066 Msa1349310:intron 40.0%
GCAGGATGATCTATTCACTT+GGG - tig0010690:13048-13067 Msa1349310:intron 40.0%
!! TTTAAGTTTTTGCTGGGGCA+TGG - tig0010690:13291-13310 Msa1349310:intron 40.0%
! GGCATGGTTCTATATGGTTT+AGG - tig0010690:13307-13326 Msa1349310:intron 40.0%
TGAATTGAACCAAGGTCTTG+CGG + tig0010690:13477-13496 None:intergenic 40.0%
GCTCCCAACTATGAAATTGA+TGG - tig0010690:13606-13625 Msa1349310:intron 40.0%
TTGAGTTCCTCAAGCATCAA+TGG - tig0010690:14666-14685 Msa1349310:intron 40.0%
! AGAAGACTTGTGATGATGTG+TGG - tig0010690:14689-14708 Msa1349310:intron 40.0%
ACGAGATTCCTTATTCCCTA+CGG - tig0010690:15204-15223 Msa1349310:intron 40.0%
!!! AGTGTTTTTGGTTTGCCGTA+GGG + tig0010690:15222-15241 None:intergenic 40.0%
AATGGAGGAGTAAGGTTGAA+TGG + tig0010690:15371-15390 None:intergenic 40.0%
ATCATTGCCATCCATTAACC+TGG - tig0010690:15516-15535 Msa1349310:intron 40.0%
AGCAAGTTTAGGAGATACCT+TGG + tig0010690:15544-15563 None:intergenic 40.0%
! AGAGTGTCACTATTGAGAGA+AGG + tig0010690:15626-15645 None:intergenic 40.0%
! GCATCCATTGTTGTTATGGT+TGG - tig0010690:15658-15677 Msa1349310:intron 40.0%
! ACAAGGTATTATGGTGGGAA+CGG - tig0010690:15683-15702 Msa1349310:intron 40.0%
CGTAGAATTTGCATTGGAGT+TGG + tig0010690:16043-16062 None:intergenic 40.0%
AGCCACGACTTCATTTAATG+AGG + tig0010690:16112-16131 None:intergenic 40.0%
CTACATGATAAGTGGGGAAT+TGG + tig0010690:16149-16168 None:intergenic 40.0%
ATTCCCCACTTATCATGTAG+TGG - tig0010690:16149-16168 Msa1349310:intron 40.0%
AGGTCCACTACATGATAAGT+GGG + tig0010690:16156-16175 None:intergenic 40.0%
ATGAAACTCGTCCAGTTGTT+AGG + tig0010690:16225-16244 None:intergenic 40.0%
TATGCAAGACTGCACATTGA+TGG + tig0010690:16248-16267 None:intergenic 40.0%
TGAACTGAAAGATATACCGG+TGG + tig0010690:16293-16312 None:intergenic 40.0%
CCCACCACAAACTATAACAT+AGG - tig0010690:16331-16350 Msa1349310:intron 40.0%
! CCCTATGTTATAGTTTGTGG+TGG + tig0010690:16335-16354 None:intergenic 40.0%
AACTATTATGCAGGATCAGC+AGG + tig0010690:16379-16398 None:intergenic 40.0%
GCTGGAGAAAACTATTATGC+AGG + tig0010690:16388-16407 None:intergenic 40.0%
!! GTGATTTTAGCACTTTTGGC+TGG + tig0010690:16406-16425 None:intergenic 40.0%
!! GTCGACTTTGATAATGTGGA+AGG + tig0010690:16428-16447 None:intergenic 40.0%
!! TGGAGTCGACTTTGATAATG+TGG + tig0010690:16432-16451 None:intergenic 40.0%
! TTATCAAAGTCGACTCCAAG+AGG - tig0010690:16434-16453 Msa1349310:intron 40.0%
GTCCCTTTCCTAAGTTAGTT+TGG + tig0010690:16469-16488 None:intergenic 40.0%
GCCTACCATTCATACTTTAG+AGG + tig0010690:16862-16881 None:intergenic 40.0%
!!! GAGTGACACCTCTTGTTTTA+CGG - tig0010690:16976-16995 Msa1349310:intron 40.0%
!!! AGTGACACCTCTTGTTTTAC+GGG - tig0010690:16977-16996 Msa1349310:intron 40.0%
! CAGGTGCTACGAAGAAATTA+AGG + tig0010690:17500-17519 None:intergenic 40.0%
CTTAATTTCTTCGTAGCACC+TGG - tig0010690:17498-17517 Msa1349310:intron 40.0%
TTCGAAATGACCAATCGAGT+TGG + tig0010690:17693-17712 None:intergenic 40.0%
GGTTTGATGTCACACTATCT+GGG + tig0010690:17888-17907 None:intergenic 40.0%
TGGTTTGATGTCACACTATC+TGG + tig0010690:17889-17908 None:intergenic 40.0%
TAGCCGCAGTTTACTACAAT+GGG + tig0010690:17943-17962 None:intergenic 40.0%
TTAGCCGCAGTTTACTACAA+TGG + tig0010690:17944-17963 None:intergenic 40.0%
! CGTTGCATCGATAGTTTATG+TGG + tig0010690:18067-18086 None:intergenic 40.0%
CATAAACTATCGATGCAACG+TGG - tig0010690:18067-18086 Msa1349310:intron 40.0%
ACTCATACTTTGTAGGGTGA+TGG + tig0010690:18145-18164 None:intergenic 40.0%
GCACAGTCTTAAACCAATTC+AGG - tig0010690:18169-18188 Msa1349310:intron 40.0%
AAAGTGGCCTGATAAGTCAA+GGG + tig0010690:18310-18329 None:intergenic 40.0%
AGTCTACGTGGATGAAGAAA+TGG - tig0010690:18621-18640 Msa1349310:five_prime_UTR 40.0%
GAAGTCTTCTTCAAGGCAAA+AGG + tig0010690:18680-18699 None:intergenic 40.0%
TGACATGGAAGTCTTCTTCA+AGG + tig0010690:18687-18706 None:intergenic 40.0%
! GTACTGAGCAGTTGATTCAA+AGG + tig0010690:18854-18873 None:intergenic 40.0%
AAGTTTGTAGATCAGGTGAC+CGG + tig0010690:19142-19161 None:intergenic 40.0%
TGAGAAAGAAGCTGCTGAAA+TGG - tig0010690:19194-19213 Msa1349310:intron 40.0%
GAGAAAGAAGCTGCTGAAAT+GGG - tig0010690:19195-19214 Msa1349310:intron 40.0%
! AAGAAGAGCACAATCAGCTT+CGG + tig0010690:19391-19410 None:intergenic 40.0%
AAGCACCAATACAGGAATCA+AGG + tig0010690:19416-19435 None:intergenic 40.0%
!! AGCTTCAAAAGCACCAATAC+AGG + tig0010690:19424-19443 None:intergenic 40.0%
!!! TTTTGAAGCTAGCATGTCCA+GGG - tig0010690:19434-19453 Msa1349310:five_prime_UTR 40.0%
AATGATCTGCTGCTGTAACA+AGG - tig0010690:19509-19528 Msa1349310:five_prime_UTR 40.0%
AATCTCATCATACCTACCCT+TGG + tig0010690:19910-19929 None:intergenic 40.0%
TAGGTATGATGAGATTGTGG+AGG - tig0010690:19914-19933 Msa1349310:intron 40.0%
! GGAACAAATGGAACGTTTTC+TGG + tig0010690:19975-19994 None:intergenic 40.0%
AAACCAGAGATGGGAACAAA+TGG + tig0010690:12263-12282 None:intergenic 40.0%
TACAAACCTTGACTGGTACA+AGG - tig0010690:12310-12329 Msa1349310:intron 40.0%
ACAAACCTTGACTGGTACAA+GGG - tig0010690:12311-12330 Msa1349310:intron 40.0%
CAGAATGTCTACAAGTTTGG+AGG - tig0010690:20135-20154 Msa1349310:intron 40.0%
GTCTACAAGTTTGGAGGAAT+TGG - tig0010690:20141-20160 Msa1349310:intron 40.0%
TTAAATCTCACATAGTCGCC+GGG + tig0010690:20327-20346 None:intergenic 40.0%
GATGTTAAGGATCTCAAGAG+TGG - tig0010690:20360-20379 Msa1349310:intron 40.0%
!! AGCCATTTTCAATCTTGCCA+GGG + tig0010690:20464-20483 None:intergenic 40.0%
!! TAGCCATTTTCAATCTTGCC+AGG + tig0010690:20465-20484 None:intergenic 40.0%
ATCACACTTGACAGCAATGT+GGG + tig0010690:20514-20533 None:intergenic 40.0%
AAGCCCAAATTCCTGATGAA+TGG - tig0010690:20582-20601 Msa1349310:intron 40.0%
TTCTCTGAATATCCTCCACT+TGG - tig0010690:12902-12921 Msa1349310:intron 40.0%
GTGAAGAACGAACGGTAGTA+GGG + tig0010690:10591-10610 None:intergenic 45.0%
TGTGAAGAACGAACGGTAGT+AGG + tig0010690:10592-10611 None:intergenic 45.0%
GAAACCCTAGTTGAGTAGCA+AGG + tig0010690:10631-10650 None:intergenic 45.0%
ACCTTGTGACGAAGGAGAAA+AGG + tig0010690:10669-10688 None:intergenic 45.0%
CAATGGGGATGTAGCTCATA+TGG - tig0010690:11268-11287 Msa1349310:intron 45.0%
TTGATTTCCCAGAGTCGACA+TGG + tig0010690:11612-11631 None:intergenic 45.0%
CTTGTAGATCAAGTGACCAG+TGG + tig0010690:11638-11657 None:intergenic 45.0%
GGTCACTTGATCTACAAGCT+TGG - tig0010690:11640-11659 Msa1349310:intron 45.0%
CACTTGATCTACAAGCTTGG+AGG - tig0010690:11643-11662 Msa1349310:intron 45.0%
AGCGTTCATTCAAGTATGCC+TGG - tig0010690:11719-11738 Msa1349310:intron 45.0%
GCGTTCATTCAAGTATGCCT+GGG - tig0010690:11720-11739 Msa1349310:intron 45.0%
TCACCATTGACATTGCTCTC+TGG - tig0010690:11779-11798 Msa1349310:intron 45.0%
CTTCCAGAGAGCAATGTCAA+TGG + tig0010690:11785-11804 None:intergenic 45.0%
TAATGAAATCCCTGTGTCCG+GGG + tig0010690:11846-11865 None:intergenic 45.0%
ACAATCAGCTTGGGATGTTC+CGG + tig0010690:11881-11900 None:intergenic 45.0%
!!! ACTACTGGTGGTTTTGAAGC+CGG - tig0010690:11922-11941 Msa1349310:CDS 45.0%
! GAAGCCGGTATTTCTAAGGA+TGG - tig0010690:11937-11956 Msa1349310:CDS 45.0%
! AAGCAAGGAGAGCATGTTCA+CGG + tig0010690:11969-11988 None:intergenic 45.0%
TCACACCAAGAGTGAAAGCA+AGG + tig0010690:11984-12003 None:intergenic 45.0%
TACTACACCCAAGTACTCCA+AGG - tig0010690:12166-12185 Msa1349310:CDS 45.0%
ACTACACCCAAGTACTCCAA+GGG - tig0010690:12167-12186 Msa1349310:CDS 45.0%
!!! TGTTCCCATCTCTGGTTTTG+AGG - tig0010690:12265-12284 Msa1349310:intron 45.0%
!!! GTTCCCATCTCTGGTTTTGA+GGG - tig0010690:12266-12285 Msa1349310:intron 45.0%
TCTCCCTCAAAACCAGAGAT+GGG + tig0010690:12272-12291 None:intergenic 45.0%
ATCTCCCTCAAAACCAGAGA+TGG + tig0010690:12273-12292 None:intergenic 45.0%
! GCCTCTTAGGCTCATTGATT+TGG + tig0010690:12361-12380 None:intergenic 45.0%
AGACATCCTGTAGTGGTAGT+CGG + tig0010690:12400-12419 None:intergenic 45.0%
CAGGATGTCTACAAGATTGG+AGG - tig0010690:12410-12429 Msa1349310:intron 45.0%
!! GAGACTGGTGTCATAAAACC+TGG - tig0010690:12461-12480 Msa1349310:intron 45.0%
GCAAAAGTGACAACCATTCC+AGG + tig0010690:12482-12501 None:intergenic 45.0%
TTCAGTTGTCAGTCCAGTAG+GGG + tig0010690:12504-12523 None:intergenic 45.0%
CTTCAGTTGTCAGTCCAGTA+GGG + tig0010690:12505-12524 None:intergenic 45.0%
ACTTCAGTTGTCAGTCCAGT+AGG + tig0010690:12506-12525 None:intergenic 45.0%
GACAACTGAAGTCAAGTCTG+TGG - tig0010690:12514-12533 Msa1349310:intron 45.0%
CTGTTAAGGATCTCAAGCGT+GGG - tig0010690:12606-12625 Msa1349310:intron 45.0%
GTATGTTGCCTCAAACTCCA+AGG - tig0010690:12628-12647 Msa1349310:intron 45.0%
GAGCATAGCCATTTCCAATC+TGG + tig0010690:12715-12734 None:intergenic 45.0%
AAACTTGACAGCAATGTGGG+AGG + tig0010690:12756-12775 None:intergenic 45.0%
CAGCAAACTTGACAGCAATG+TGG + tig0010690:12760-12779 None:intergenic 45.0%
GATTGATAGGCGTTCTGGTA+AGG - tig0010690:12793-12812 Msa1349310:intron 45.0%
GAGAAAGTCTCAACCACCAT+GGG + tig0010690:12887-12906 None:intergenic 45.0%
AGAGAAAGTCTCAACCACCA+TGG + tig0010690:12888-12907 None:intergenic 45.0%
TAGAGACATGCGTCAAACTG+TGG - tig0010690:12937-12956 Msa1349310:intron 45.0%
!! AGAACTGGGTTCTAGATCGA+CGG - tig0010690:13116-13135 Msa1349310:intron 45.0%
GTAAGCAAGCAGTAAGTTCC+AGG - tig0010690:13206-13225 Msa1349310:intron 45.0%
TTGCGGATATGCTACTACCT+AGG + tig0010690:13460-13479 None:intergenic 45.0%
!! AGCTATTTGGTGGATTGGAG+AGG + tig0010690:13782-13801 None:intergenic 45.0%
TGCCTACCATTCGTACTTGT+TGG - tig0010690:14479-14498 Msa1349310:intron 45.0%
GCCTACCATTCGTACTTGTT+GGG - tig0010690:14480-14499 Msa1349310:intron 45.0%
ACCCAACAAGTACGAATGGT+AGG + tig0010690:14484-14503 None:intergenic 45.0%
! TACCATTCGTACTTGTTGGG+TGG - tig0010690:14483-14502 Msa1349310:intron 45.0%
!! GTACTTGTTGGGTGGACTAT+TGG - tig0010690:14491-14510 Msa1349310:intron 45.0%
ACGAGGAGACCAAACTTTGT+AGG + tig0010690:16815-16834 None:intergenic 45.0%
! ACTTCAAACGGTTGGTTACG+AGG + tig0010690:14550-14569 None:intergenic 45.0%
GTCTTCTCCATTGATGCTTG+AGG + tig0010690:14676-14695 None:intergenic 45.0%
!! TTGGTTTGCCGTAGGGAATA+AGG + tig0010690:15215-15234 None:intergenic 45.0%
!!! CAGTGTTTTTGGTTTGCCGT+AGG + tig0010690:15223-15242 None:intergenic 45.0%
! AGGCATCAAGGCAGTGTTTT+TGG + tig0010690:15234-15253 None:intergenic 45.0%
AGACAACATCGACATGTCTC+AGG + tig0010690:15320-15339 None:intergenic 45.0%
CATGTCGATGTTGTCTCTTG+CGG - tig0010690:15324-15343 Msa1349310:intron 45.0%
GAGTAAGGTTGAATGGTGGT+TGG + tig0010690:15364-15383 None:intergenic 45.0%
ATACCTTGGCACCAGGTTAA+TGG + tig0010690:15530-15549 None:intergenic 45.0%
GCTAAAAAGAGGGCCTTCAT+TGG + tig0010690:15886-15905 None:intergenic 45.0%
CCTTGGCGTAGAATTTGCAT+TGG + tig0010690:16049-16068 None:intergenic 45.0%
CCAATGCAAATTCTACGCCA+AGG - tig0010690:16046-16065 Msa1349310:intron 45.0%
GGCCTCATTAAATGAAGTCG+TGG - tig0010690:16107-16126 Msa1349310:intron 45.0%
CATGATAAGTGGGGAATTGG+AGG + tig0010690:16146-16165 None:intergenic 45.0%
GGTCCACTACATGATAAGTG+GGG + tig0010690:16155-16174 None:intergenic 45.0%
CAGGTCCACTACATGATAAG+TGG + tig0010690:16157-16176 None:intergenic 45.0%
GGAGATTTCCACCTAACAAC+TGG - tig0010690:16211-16230 Msa1349310:intron 45.0%
AAACTCGTCCAGTTGTTAGG+TGG + tig0010690:16222-16241 None:intergenic 45.0%
TATTATGCAGGATCAGCAGG+AGG + tig0010690:16376-16395 None:intergenic 45.0%
!! GTTTGGTTCTCTTCTCCTCT+TGG + tig0010690:16452-16471 None:intergenic 45.0%
!! GTTTGTTGTCTCGGAGATGA+TGG + tig0010690:16518-16537 None:intergenic 45.0%
TATCTCATGACACTGGTGCT+TGG + tig0010690:16768-16787 None:intergenic 45.0%
ACGAGGAGACCAAACTTTGT+CGG - tig0010690:16815-16834 Msa1349310:intron 45.0%
AAAACGGCCCGTAAAACAAG+AGG + tig0010690:16987-17006 None:intergenic 45.0%
!! TCTCCTAGCTTTACATGGCA+GGG + tig0010690:17050-17069 None:intergenic 45.0%
!! TTCTCCTAGCTTTACATGGC+AGG + tig0010690:17051-17070 None:intergenic 45.0%
TGCCATGTAAAGCTAGGAGA+AGG - tig0010690:17050-17069 Msa1349310:intron 45.0%
!! GTCCTTCTCCTAGCTTTACA+TGG + tig0010690:17055-17074 None:intergenic 45.0%
TATCGCGTTCTACCAGGTAA+TGG - tig0010690:17095-17114 Msa1349310:intron 45.0%
AAGTTGGACGCTTCCTTAGT+CGG + tig0010690:17558-17577 None:intergenic 45.0%
ATGATTCTCACGTCGTCGTA+TGG - tig0010690:17618-17637 Msa1349310:intron 45.0%
TGATTCTCACGTCGTCGTAT+GGG - tig0010690:17619-17638 Msa1349310:intron 45.0%
GGCTGAGTCGACAATTGATT+TGG - tig0010690:17845-17864 Msa1349310:intron 45.0%
! TGTCACACTATCTGGGTTGA+AGG + tig0010690:17881-17900 None:intergenic 45.0%
CTATTGTCCACACTCTGAGT+TGG + tig0010690:18244-18263 None:intergenic 45.0%
TCAGAGTGTGGACAATAGCT+TGG - tig0010690:18246-18265 Msa1349310:five_prime_UTR 45.0%
TTTGGGTCCCTTGACTTATC+AGG - tig0010690:18300-18319 Msa1349310:five_prime_UTR 45.0%
CAAAGTGGCCTGATAAGTCA+AGG + tig0010690:18311-18330 None:intergenic 45.0%
CTTCCATGTCACATTCAGAC+AGG - tig0010690:18696-18715 Msa1349310:five_prime_UTR 45.0%
ATGCCTGTCTGAATGTGACA+TGG + tig0010690:18702-18721 None:intergenic 45.0%
GGTCACCTGATCTACAAACT+TGG - tig0010690:19141-19160 Msa1349310:intron 45.0%
CACCTGATCTACAAACTTGG+AGG - tig0010690:19144-19163 Msa1349310:intron 45.0%
CACCTCCAAGTTTGTAGATC+AGG + tig0010690:19149-19168 None:intergenic 45.0%
AGACTTCAGTCAAGTATGCC+TGG - tig0010690:19220-19239 Msa1349310:intron 45.0%
!!! CTTTTGAAGCTAGCATGTCC+AGG - tig0010690:19433-19452 Msa1349310:five_prime_UTR 45.0%
! AGCAAGGAGAACTTGTTCCA+TGG + tig0010690:19469-19488 None:intergenic 45.0%
GTTCTCCTTGCTTTCACTCT+TGG - tig0010690:19477-19496 Msa1349310:five_prime_UTR 45.0%
ATCTGCTGCTGTAACAAGGT+AGG - tig0010690:19513-19532 Msa1349310:five_prime_UTR 45.0%
GATGCCATTCAGTACTCCAA+GGG - tig0010690:19891-19910 Msa1349310:intron 45.0%
GGGTAGGTATGATGAGATTG+TGG - tig0010690:19911-19930 Msa1349310:intron 45.0%
GTTCCATTTGTTCCCATCTC+TGG - tig0010690:19981-20000 Msa1349310:intron 45.0%
!!! TGTTCCCATCTCTGGTTTTG+AGG - tig0010690:12265-12284 Msa1349310:intron 45.0%
!!! GTTCCCATCTCTGGTTTTGA+GGG - tig0010690:12266-12285 Msa1349310:intron 45.0%
TCTCCCTCAAAACCAGAGAT+GGG + tig0010690:12272-12291 None:intergenic 45.0%
ATCTCCCTCAAAACCAGAGA+TGG + tig0010690:12273-12292 None:intergenic 45.0%
!! AGGCTCGTTGATTTGGTCAA+GGG + tig0010690:20079-20098 None:intergenic 45.0%
!! TAGGCTCGTTGATTTGGTCA+AGG + tig0010690:20080-20099 None:intergenic 45.0%
ACCAAATCAACGAGCCTAAG+AGG - tig0010690:20082-20101 Msa1349310:intron 45.0%
!! AGACATTCTGAAGCGGTAGT+CGG + tig0010690:20125-20144 None:intergenic 45.0%
AGGAATTGGAACTGTACCTG+TGG - tig0010690:20155-20174 Msa1349310:intron 45.0%
GGAATTGGAACTGTACCTGT+GGG - tig0010690:20156-20175 Msa1349310:intron 45.0%
TGGTGTCTTGAAACCTGGAA+TGG - tig0010690:20191-20210 Msa1349310:intron 45.0%
TGTCTTGAAACCTGGAATGG+AGG - tig0010690:20194-20213 Msa1349310:intron 45.0%
GAAAAAGTCACCTCCATTCC+AGG + tig0010690:20207-20226 None:intergenic 45.0%
TTTAGCTGTCAGTCCAGTAG+GGG + tig0010690:20229-20248 None:intergenic 45.0%
CTTTAGCTGTCAGTCCAGTA+GGG + tig0010690:20230-20249 None:intergenic 45.0%
ACTTTAGCTGTCAGTCCAGT+AGG + tig0010690:20231-20250 None:intergenic 45.0%
GGAGATGCACGATAAACCTA+TGG - tig0010690:20260-20279 Msa1349310:intron 45.0%
GATGCACGATAAACCTATGG+TGG - tig0010690:20263-20282 Msa1349310:intron 45.0%
! CGGAGGTTTTTCTGTGAACA+AGG + tig0010690:20292-20311 None:intergenic 45.0%
GTTCACAGAAAAACCTCCGA+CGG - tig0010690:20293-20312 Msa1349310:intron 45.0%
CTATGTTGCCTCTAACTCCA+AGG - tig0010690:20383-20402 Msa1349310:intron 45.0%
CACCCTGGCAAGATTGAAAA+TGG - tig0010690:20459-20478 Msa1349310:intron 45.0%
CATCACACTTGACAGCAATG+TGG + tig0010690:20515-20534 None:intergenic 45.0%
ACCAAGATTGATAGGCGTTC+TGG - tig0010690:20543-20562 Msa1349310:intron 45.0%
ACCAGAACGCCTATCAATCT+TGG + tig0010690:12792-12811 None:intergenic 45.0%
AGATTGATAGGCGTTCTGGT+AGG - tig0010690:12792-12811 Msa1349310:intron 45.0%
GATTGATAGGCGTTCTGGTA+GGG - tig0010690:12793-12812 Msa1349310:intron 45.0%
! TTCCTGATGAATGGTGATGC+TGG - tig0010690:20591-20610 Msa1349310:intron 45.0%
TACCAGCATCACCATTCATC+AGG + tig0010690:20596-20615 None:intergenic 45.0%
GAGAAAGTCTCAACCACCAT+CGG + tig0010690:12887-12906 None:intergenic 45.0%
!! ACTTGGCCGTTTTACTGTCA+GGG - tig0010690:20674-20693 Msa1349310:five_prime_UTR 45.0%
GCTTGTCCCTGACAGTAAAA+CGG + tig0010690:20683-20702 None:intergenic 45.0%
!!! TTAATTTATTTTTACAAAAT+CGG - tig0010690:14354-14373 Msa1349310:intron 5.0%
! GCCTTTTCTCCTTCGTCACA+AGG - tig0010690:10665-10684 Msa1349310:CDS 50.0%
GGTTCGTTACCTTGTGACGA+AGG + tig0010690:10677-10696 None:intergenic 50.0%
CACTTAGCATGCGAGAGGTA+CGG - tig0010690:11305-11324 Msa1349310:intron 50.0%
! ACTTAGCATGCGAGAGGTAC+GGG - tig0010690:11306-11325 Msa1349310:intron 50.0%
!! TCATTGGCCATGTCGACTCT+GGG - tig0010690:11602-11621 Msa1349310:intron 50.0%
TCTGGGAAATCAACCACCAC+TGG - tig0010690:11619-11638 Msa1349310:intron 50.0%
GTAGATCAAGTGACCAGTGG+TGG + tig0010690:11635-11654 None:intergenic 50.0%
TTGACAAGCGTGTCATCGAG+AGG - tig0010690:11668-11687 Msa1349310:intron 50.0%
GTTCAGCCTTGAGCTTGTCA+AGG + tig0010690:11747-11766 None:intergenic 50.0%
CTCAAGGCTGAACGTGAAAG+AGG - tig0010690:11754-11773 Msa1349310:intron 50.0%
AATGAAATCCCTGTGTCCGG+GGG + tig0010690:11845-11864 None:intergenic 50.0%
GAGAACGGCACAATCAGCTT+GGG + tig0010690:11890-11909 None:intergenic 50.0%
TGAGAACGGCACAATCAGCT+TGG + tig0010690:11891-11910 None:intergenic 50.0%
GGCTTCAAAACCACCAGTAG+TGG + tig0010690:11923-11942 None:intergenic 50.0%
! AGCAAGGAGAGCATGTTCAC+GGG + tig0010690:11968-11987 None:intergenic 50.0%
GCTCTCCTTGCTTTCACTCT+TGG - tig0010690:11976-11995 Msa1349310:CDS 50.0%
AGCGCTCTACAAACCTTGAC+TGG - tig0010690:12303-12322 Msa1349310:intron 50.0%
TTGGACCCTTGTACCAGTCA+AGG + tig0010690:12319-12338 None:intergenic 50.0%
CAAGGGTCCAACTCTTCTTG+AGG - tig0010690:12328-12347 Msa1349310:intron 50.0%
TCAAGGGCCTCAAGAAGAGT+TGG + tig0010690:12338-12357 None:intergenic 50.0%
ATCCTGTAGTGGTAGTCGGA+GGG + tig0010690:12396-12415 None:intergenic 50.0%
AGGAATTGGAACTGTGCCTG+TGG - tig0010690:12430-12449 Msa1349310:intron 50.0%
GGAATTGGAACTGTGCCTGT+GGG - tig0010690:12431-12450 Msa1349310:intron 50.0%
GAATTGGAACTGTGCCTGTG+GGG - tig0010690:12432-12451 Msa1349310:intron 50.0%
!!! GTTGTCACTTTTGCCCCTAC+TGG - tig0010690:12488-12507 Msa1349310:intron 50.0%
GCATCATGAAGCTCTCACAG+AGG - tig0010690:12541-12560 Msa1349310:intron 50.0%
TCCCACATTGTCACCAGGAA+GGG + tig0010690:12567-12586 None:intergenic 50.0%
ATCCCACATTGTCACCAGGA+AGG + tig0010690:12568-12587 None:intergenic 50.0%
GCTGTTAAGGATCTCAAGCG+TGG - tig0010690:12605-12624 Msa1349310:intron 50.0%
TGGGTCATCCTTGGAGTTTG+AGG + tig0010690:12639-12658 None:intergenic 50.0%
AGTTGGCAGATTCCTTGGCT+GGG + tig0010690:12658-12677 None:intergenic 50.0%
AAGTTGGCAGATTCCTTGGC+TGG + tig0010690:12659-12678 None:intergenic 50.0%
ATGAATCACCCTGGCCAGAT+TGG - tig0010690:12698-12717 Msa1349310:intron 50.0%
AGCCATTTCCAATCTGGCCA+GGG + tig0010690:12709-12728 None:intergenic 50.0%
TAGCCATTTCCAATCTGGCC+AGG + tig0010690:12710-12729 None:intergenic 50.0%
ATGCGTCAAACTGTGGCTGT+TGG - tig0010690:12944-12963 Msa1349310:intron 50.0%
TGCGTCAAACTGTGGCTGTT+GGG - tig0010690:12945-12964 Msa1349310:intron 50.0%
CATCAAGGCTGTGGAGAAGA+AGG - tig0010690:12970-12989 Msa1349310:intron 50.0%
GTCTGCTTAAGTCCTCCACT+GGG + tig0010690:12998-13017 None:intergenic 50.0%
GAAGAAGAAGTGAACCGAGC+AGG - tig0010690:13030-13049 Msa1349310:intron 50.0%
GAAACAGAGTCAGCAAGTCC+TGG + tig0010690:13227-13246 None:intergenic 50.0%
! TGCTGGGGCATGGTTCTATA+TGG - tig0010690:13301-13320 Msa1349310:intron 50.0%
CCTAGGCCACAAAGTCATCT+TGG + tig0010690:13443-13462 None:intergenic 50.0%
CCAAGATGACTTTGTGGCCT+AGG - tig0010690:13440-13459 Msa1349310:intron 50.0%
GTAGCATATCCGCAAGACCT+TGG - tig0010690:13465-13484 Msa1349310:intron 50.0%
GTCCACCCAACAAGTACGAA+TGG + tig0010690:14488-14507 None:intergenic 50.0%
TACTAGGAGGTTGCTGCACA+AGG - tig0010690:14756-14775 Msa1349310:intron 50.0%
GGAGGAGTAAGGTTGAATGG+TGG + tig0010690:15368-15387 None:intergenic 50.0%
GAAGGAACTCTTGTTGCTCG+CGG + tig0010690:15482-15501 None:intergenic 50.0%
CTTGGCACCAGGTTAATGGA+TGG + tig0010690:15526-15545 None:intergenic 50.0%
! CATCCATTAACCTGGTGCCA+AGG - tig0010690:15524-15543 Msa1349310:intron 50.0%
TTAGGAGATACCTTGGCACC+AGG + tig0010690:15537-15556 None:intergenic 50.0%
! TATGGTGGGAACGGCACAAA+AGG - tig0010690:15692-15711 Msa1349310:intron 50.0%
TTCAGACTCGGCTGAAGGTA+TGG + tig0010690:16079-16098 None:intergenic 50.0%
AGCCGAGTCTGAATCTGGTA+CGG - tig0010690:16086-16105 Msa1349310:intron 50.0%
!! GTTTGTGGTGGGCCAGAAAT+AGG + tig0010690:16323-16342 None:intergenic 50.0%
AGGGACCCAACATAAAAGCG+TGG - tig0010690:16483-16502 Msa1349310:intron 50.0%
CGAGGAGACCAAACTTTGTC+GGG - tig0010690:16816-16835 Msa1349310:intron 50.0%
CATTGCAGCCCGACAAAGTT+TGG + tig0010690:16827-16846 None:intergenic 50.0%
CAAACTTTGTCGGGCTGCAA+TGG - tig0010690:16825-16844 Msa1349310:intron 50.0%
ATGCCCTGCCATGTAAAGCT+AGG - tig0010690:17044-17063 Msa1349310:intron 50.0%
TGAGTCGGTCGGATCTTTCA+AGG - tig0010690:17661-17680 Msa1349310:intron 50.0%
!! AAGGAAGCGTCCAACTCGAT+TGG - tig0010690:17680-17699 Msa1349310:intron 50.0%
! TTGGACGCTTCTAGCTGAGT+CGG - tig0010690:17774-17793 Msa1349310:intron 50.0%
AGAGACACAAAGAGGGTGGA+CGG + tig0010690:17823-17842 None:intergenic 50.0%
CAGCCACAGAGACACAAAGA+GGG + tig0010690:17830-17849 None:intergenic 50.0%
TCAGCCACAGAGACACAAAG+AGG + tig0010690:17831-17850 None:intergenic 50.0%
! ATCTGGGTTGAAGGATCAGC+TGG + tig0010690:17872-17891 None:intergenic 50.0%
TTCCGAACCAACTCAGAGTG+TGG - tig0010690:18234-18253 Msa1349310:exon 50.0%
!! GTCCACACTCTGAGTTGGTT+CGG + tig0010690:18239-18258 None:intergenic 50.0%
! TGTTGCCTTTCTGAGAGACG+TGG - tig0010690:18654-18673 Msa1349310:five_prime_UTR 50.0%
AAAGGCCACGTCTCTCAGAA+AGG + tig0010690:18662-18681 None:intergenic 50.0%
!! TCATTGGCGATGTCGACTCT+GGG - tig0010690:19103-19122 Msa1349310:five_prime_UTR 50.0%
TCTGGGAAGTCAACTACCAC+CGG - tig0010690:19120-19139 Msa1349310:intron 50.0%
TTTGTAGATCAGGTGACCGG+TGG + tig0010690:19139-19158 None:intergenic 50.0%
CTTGAGCTTGTCAAGGATCC+AGG + tig0010690:19241-19260 None:intergenic 50.0%
CTGGATCCTTGACAAGCTCA+AGG - tig0010690:19239-19258 Msa1349310:intron 50.0%
GTTCAGCCTTGAGCTTGTCA+AGG + tig0010690:11747-11766 None:intergenic 50.0%
CTCAAGGCTGAACGTGAAAG+AGG - tig0010690:11754-11773 Msa1349310:intron 50.0%
TGCACTGTCATTGATGTCCC+TGG - tig0010690:19327-19346 Msa1349310:five_prime_UTR 50.0%
! GGAGAACTTGTTCCATGGTC+TGG + tig0010690:19464-19483 None:intergenic 50.0%
TCACGCCAAGAGTGAAAGCA+AGG + tig0010690:19485-19504 None:intergenic 50.0%
GGATGCCATTCAGTACTCCA+AGG - tig0010690:19890-19909 Msa1349310:intron 50.0%
!! CCTACCCTTGGAGTACTGAA+TGG + tig0010690:19898-19917 None:intergenic 50.0%
CCATTCAGTACTCCAAGGGT+AGG - tig0010690:19895-19914 Msa1349310:intron 50.0%
AGCGCTCTACAAACCTTGAC+TGG - tig0010690:12303-12322 Msa1349310:intron 50.0%
TTGGACCCTTGTACCAGTCA+AGG + tig0010690:12319-12338 None:intergenic 50.0%
AAGGGTCCAAACCCTTCTTG+AGG - tig0010690:20053-20072 Msa1349310:intron 50.0%
TTGGTCAAGGGCCTCAAGAA+GGG + tig0010690:12342-12361 None:intergenic 50.0%
TTTGGTCAAGGGCCTCAAGA+AGG + tig0010690:12343-12362 None:intergenic 50.0%
! GCCTCTTAGGCTCGTTGATT+TGG + tig0010690:20086-20105 None:intergenic 50.0%
!! ATTCTGAAGCGGTAGTCGGA+GGG + tig0010690:20121-20140 None:intergenic 50.0%
GAGACTGGTGTCTTGAAACC+TGG - tig0010690:20186-20205 Msa1349310:intron 50.0%
!! GAGGTGACTTTTTCCCCTAC+TGG - tig0010690:20213-20232 Msa1349310:intron 50.0%
GACAGCTAAAGTCACGTCTG+TGG - tig0010690:20239-20258 Msa1349310:intron 50.0%
TGGGTCATCCTTGGAGTTAG+AGG + tig0010690:20394-20413 None:intergenic 50.0%
TGTAAAGTTAGCGGCCTCCT+TGG + tig0010690:20418-20437 None:intergenic 50.0%
ACACTTGACAGCAATGTGGG+AGG + tig0010690:20511-20530 None:intergenic 50.0%
ACAGTAAAACGGCCAAGTGG+AGG + tig0010690:20672-20691 None:intergenic 50.0%
CTGACAGTAAAACGGCCAAG+TGG + tig0010690:20675-20694 None:intergenic 50.0%
!! CACTTGGCCGTTTTACTGTC+AGG - tig0010690:20673-20692 Msa1349310:five_prime_UTR 50.0%
AAGCGTCAAACTGTGGCTGT+TGG - tig0010690:20699-20718 Msa1349310:five_prime_UTR 50.0%
!! TGTGGCTGTTGGTGTCATCA+CGG - tig0010690:20710-20729 Msa1349310:five_prime_UTR 50.0%
CGCATCACTTAGCATGCGAG+AGG - tig0010690:11300-11319 Msa1349310:intron 55.0%
! CTTAGCATGCGAGAGGTACG+GGG - tig0010690:11307-11326 Msa1349310:intron 55.0%
!! GTCATTGGCCATGTCGACTC+TGG - tig0010690:11601-11620 Msa1349310:intron 55.0%
CTTGAGCTTGTCAAGGACCC+AGG + tig0010690:11740-11759 None:intergenic 55.0%
CTGGGTCCTTGACAAGCTCA+AGG - tig0010690:11738-11757 Msa1349310:intron 55.0%
TGCACTGTCATTGATGCCCC+CGG - tig0010690:11826-11845 Msa1349310:CDS 55.0%
GGCTTGTCTGAAGGCCTCTT+AGG + tig0010690:12374-12393 None:intergenic 55.0%
TCCTGTAGTGGTAGTCGGAG+GGG + tig0010690:12395-12414 None:intergenic 55.0%
CATCCTGTAGTGGTAGTCGG+AGG + tig0010690:12397-12416 None:intergenic 55.0%
GCCCTTCCTGGTGACAATGT+GGG - tig0010690:12563-12582 Msa1349310:intron 55.0%
TTCCTTGGCTGGGTCATCCT+TGG + tig0010690:12648-12667 None:intergenic 55.0%
CACCCTGGCCAGATTGGAAA+TGG - tig0010690:12704-12723 Msa1349310:intron 55.0%
GAGGTGTGGCAGTCAAGAAC+AGG + tig0010690:12737-12756 None:intergenic 55.0%
TGACAGCAATGTGGGAGGTG+TGG + tig0010690:12751-12770 None:intergenic 55.0%
GATGATTCCCACCAAGCCCA+TGG - tig0010690:12868-12887 Msa1349310:intron 55.0%
! TCAACCACCATGGGCTTGGT+GGG + tig0010690:12878-12897 None:intergenic 55.0%
AGTCTCAACCACCATGGGCT+TGG + tig0010690:12882-12901 None:intergenic 55.0%
CTAACAGCAAAACGGCCGAG+TGG + tig0010690:12920-12939 None:intergenic 55.0%
GCGTCAAACTGTGGCTGTTG+GGG - tig0010690:12946-12965 Msa1349310:intron 55.0%
TGTGGCTGTTGGGGTCATCA+AGG - tig0010690:12955-12974 Msa1349310:intron 55.0%
TGTTGGGGTCATCAAGGCTG+TGG - tig0010690:12961-12980 Msa1349310:intron 55.0%
GTGGAGAAGAAGGATCCCAG+TGG - tig0010690:12980-12999 Msa1349310:intron 55.0%
GAGAAGAAGGATCCCAGTGG+AGG - tig0010690:12983-13002 Msa1349310:intron 55.0%
GGTCTGCTTAAGTCCTCCAC+TGG + tig0010690:12999-13018 None:intergenic 55.0%
!! ACTGGGTTCTAGATCGACGG+TGG - tig0010690:13119-13138 Msa1349310:intron 55.0%
! GAAGGTATGGCTATGCGCCT+TGG + tig0010690:16066-16085 None:intergenic 55.0%
CCAGATTCAGACTCGGCTGA+AGG + tig0010690:16084-16103 None:intergenic 55.0%
CCTTCAGCCGAGTCTGAATC+TGG - tig0010690:16081-16100 Msa1349310:intron 55.0%
GGCCGTACCAGATTCAGACT+CGG + tig0010690:16091-16110 None:intergenic 55.0%
ACGTCGTCGTATGGGTGAAC+TGG - tig0010690:17627-17646 Msa1349310:intron 55.0%
! CTTCTAGCTGAGTCGGTCGA+TGG - tig0010690:17781-17800 Msa1349310:intron 55.0%
CCACAGAGACACAAAGAGGG+TGG + tig0010690:17827-17846 None:intergenic 55.0%
CCACCCTCTTTGTGTCTCTG+TGG - tig0010690:17824-17843 Msa1349310:intron 55.0%
!! CTCATTGGCGATGTCGACTC+TGG - tig0010690:19102-19121 Msa1349310:five_prime_UTR 55.0%
GAAGCTAGCATGTCCAGGGA+TGG - tig0010690:19438-19457 Msa1349310:five_prime_UTR 55.0%
CAAGGGCCTCAAGAAGGGTT+TGG + tig0010690:20062-20081 None:intergenic 55.0%
GGCTTGTCTGAAGGCCTCTT+AGG + tig0010690:12374-12393 None:intergenic 55.0%
!! TTCTGAAGCGGTAGTCGGAG+GGG + tig0010690:20120-20139 None:intergenic 55.0%
!! CATTCTGAAGCGGTAGTCGG+AGG + tig0010690:20122-20141 None:intergenic 55.0%
! GTGAACAAGGCGTCCACCAT+AGG + tig0010690:20279-20298 None:intergenic 55.0%
ATCTCACATAGTCGCCGGGA+AGG + tig0010690:20323-20342 None:intergenic 55.0%
GTCGTCGTCATGAATCACCC+TGG - tig0010690:20444-20463 Msa1349310:intron 55.0%
GAGGTGTGGCAGTGAAGAAC+AGG + tig0010690:20492-20511 None:intergenic 55.0%
TGACAGCAATGTGGGAGGTG+TGG + tig0010690:12751-12770 None:intergenic 55.0%
GATGATTCCCACCATGCCGA+TGG - tig0010690:20623-20642 Msa1349310:five_prime_UTR 55.0%
TCAACCACCATCGGCATGGT+GGG + tig0010690:20633-20652 None:intergenic 55.0%
AGTCTCAACCACCATCGGCA+TGG + tig0010690:20637-20656 None:intergenic 55.0%
CAGGGACAAGCGTCAAACTG+TGG - tig0010690:20692-20711 Msa1349310:five_prime_UTR 55.0%
!! TGTTGGTGTCATCACGGCTG+TGG - tig0010690:20716-20735 Msa1349310:five_prime_UTR 55.0%
CATCACGGCTGTGGAGAAGA+AGG - tig0010690:20725-20744 Msa1349310:five_prime_UTR 55.0%
GTGGAGAAGAAGGATCCCAG+TGG - tig0010690:12980-12999 Msa1349310:intron 55.0%
GAGAAGAAGGATCCCAGTGG+AGG - tig0010690:12983-13002 Msa1349310:intron 55.0%
TCATTGATGCCCCCGGACAC+AGG - tig0010690:11833-11852 Msa1349310:CDS 60.0%
CATTGATGCCCCCGGACACA+GGG - tig0010690:11834-11853 Msa1349310:CDS 60.0%
AGTCGGAGGGGCTTGTCTGA+AGG + tig0010690:12383-12402 None:intergenic 60.0%
GGCCCTTCCTGGTGACAATG+TGG - tig0010690:12562-12581 Msa1349310:intron 60.0%
CTCCAAGGATGACCCAGCCA+AGG - tig0010690:12643-12662 Msa1349310:intron 60.0%
GATTCCCACCAAGCCCATGG+TGG - tig0010690:12871-12890 Msa1349310:intron 60.0%
CTCAACCACCATGGGCTTGG+TGG + tig0010690:12879-12898 None:intergenic 60.0%
ACAGCAAAACGGCCGAGTGG+AGG + tig0010690:12917-12936 None:intergenic 60.0%
TGCTAGGAGGCTGCTGCACA+AGG + tig0010690:16559-16578 None:intergenic 60.0%
CTGAGTCGGTCGATGGTCGT+CGG - tig0010690:17788-17807 Msa1349310:intron 60.0%
TTCCATGGTCTGGCCATCCC+TGG + tig0010690:19454-19473 None:intergenic 60.0%
AGTCGGAGGGGCTTGTCTGA+AGG + tig0010690:12383-12402 None:intergenic 60.0%
CCAGTCTCAACACGTCCCAC+AGG + tig0010690:20174-20193 None:intergenic 60.0%
CCTGTGGGACGTGTTGAGAC+TGG - tig0010690:20171-20190 Msa1349310:intron 60.0%
CTCCAAGGATGACCCAGCCA+AGG - tig0010690:12643-12662 Msa1349310:intron 60.0%
CTCCTTGGCTGGGTCATCCT+TGG + tig0010690:20403-20422 None:intergenic 60.0%
CAAGGATGACCCAGCCAAGG+AGG - tig0010690:12646-12665 Msa1349310:intron 60.0%
AGTTAGCGGCCTCCTTGGCT+GGG + tig0010690:20413-20432 None:intergenic 60.0%
AAGTTAGCGGCCTCCTTGGC+TGG + tig0010690:20414-20433 None:intergenic 60.0%
GATTCCCACCATGCCGATGG+TGG - tig0010690:20626-20645 Msa1349310:five_prime_UTR 60.0%
CTCAACCACCATCGGCATGG+TGG + tig0010690:20634-20653 None:intergenic 60.0%
GCCCCTCCGACTACCACTAC+AGG - tig0010690:12391-12410 Msa1349310:intron 65.0%
GCTCTCACAGAGGCCCTTCC+TGG - tig0010690:12551-12570 Msa1349310:intron 65.0%
GTCCAGGGATGGCCAGACCA+TGG - tig0010690:19449-19468 Msa1349310:five_prime_UTR 65.0%
! CCTCCGACGGAGTACCTTCC+CGG - tig0010690:20306-20325 Msa1349310:intron 65.0%
!! TCGCCGGGAAGGTACTCCGT+CGG + tig0010690:20312-20331 None:intergenic 65.0%
CCAGTCTCGACACGCCCCAC+AGG + tig0010690:12449-12468 None:intergenic 70.0%
CCTGTGGGGCGTGTCGAGAC+TGG - tig0010690:12446-12465 Msa1349310:intron 70.0%
!! CCGGGAAGGTACTCCGTCGG+AGG + tig0010690:20309-20328 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0010690 gene 10520 20767 10520 ID=Msa1349310;Name=Msa1349310
tig0010690 mRNA 10520 20767 10520 ID=Msa1349310-mRNA-1;Parent=Msa1349310;Name=Msa1349310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=1557|0.4|0.5|1|0.2|0.16|6|0|396
tig0010690 exon 10520 11212 10520 ID=Msa1349310-mRNA-1:exon:6878;Parent=Msa1349310-mRNA-1
tig0010690 exon 11787 12010 11787 ID=Msa1349310-mRNA-1:exon:6877;Parent=Msa1349310-mRNA-1
tig0010690 exon 12020 12236 12020 ID=Msa1349310-mRNA-1:exon:6876;Parent=Msa1349310-mRNA-1
tig0010690 exon 18178 19129 18178 ID=Msa1349310-mRNA-1:exon:6875;Parent=Msa1349310-mRNA-1
tig0010690 exon 19258 19752 19258 ID=Msa1349310-mRNA-1:exon:6874;Parent=Msa1349310-mRNA-1
tig0010690 exon 20601 20767 20601 ID=Msa1349310-mRNA-1:exon:6873;Parent=Msa1349310-mRNA-1
tig0010690 five_prime_UTR 20601 20767 20601 ID=Msa1349310-mRNA-1:five_prime_utr;Parent=Msa1349310-mRNA-1
tig0010690 five_prime_UTR 19258 19752 19258 ID=Msa1349310-mRNA-1:five_prime_utr;Parent=Msa1349310-mRNA-1
tig0010690 five_prime_UTR 18235 19129 18235 ID=Msa1349310-mRNA-1:five_prime_utr;Parent=Msa1349310-mRNA-1
tig0010690 CDS 18178 18234 18178 ID=Msa1349310-mRNA-1:cds;Parent=Msa1349310-mRNA-1
tig0010690 CDS 12020 12236 12020 ID=Msa1349310-mRNA-1:cds;Parent=Msa1349310-mRNA-1
tig0010690 CDS 11787 12010 11787 ID=Msa1349310-mRNA-1:cds;Parent=Msa1349310-mRNA-1
tig0010690 CDS 10520 11212 10520 ID=Msa1349310-mRNA-1:cds;Parent=Msa1349310-mRNA-1
Gene Sequence

>Msa1349310

ATGATCTATTCACTTGGGAAGCATATGTCAAGTCTGCACCTTCATCTCATAGCTTTTATCTTTTTGTGTTTTCAAGGACAAATGGGTAAGGAAAAGATTAACATTGTTCTCATTGGCGATGTCGACTCTGGGAAGTCAACTACCACCGGTCACCTGATCTACAAACTTGGAGGTGTTGACAAGAGTGTTATTGAGAAATTTGAGAAAGAAGCTGCTGAAATGGGCAAGACTTCAGTCAAGTATGCCTGGATCCTTGACAAGCTCAAGGCTGAACGTATGACCATTGACATTTCTTACTCGAAGTTTGAGACAACAAAGAACTGCTGCACTGTCATTGATGTCCCTGGACACAAAAATTTCATTAAGAACATGATCACTGGGACGTCCGAAGCTGATTGTGCTCTTCTTATCCTTGATTCCTGTATTGGTGCTTTTGAAGCTAGCATGTCCAGGGATGGCCAGACCATGGAACAAGTTCTCCTTGCTTTCACTCTTGGCGCCCTTGACCAAATCAACGAGCCTAAGAGGCCTTCAGACAAGCCCCTCCGACTACCGCTTCAGAATGTCTACAAGTTTGGAGGAATTGGAACTGTACCTGTGGGACGTGTTGAGACTGGTGTCTTGAAACCTGGAATGGAGGTGACTTTTTCCCCTACTGGACTGACAGCTAAAGTCACGTCTGTGGAGATGCACGATAAACCTATGGTGGACGCCTTGTTCACAGAAAAACCTCCGACGGAGTACCTTCCCGGCGACTATGTGAGATTTAATGTTGAGAACGTTGATGTTAAGGATCTCAAGAGTGGCTATGTTGCCTCTAACTCCAAGGATGACCCAGCCAAGGAGGCCGCTAACTTTACATCTCAAGTCGTCGTCATGAATCACCCTGGCAAGATTGAAAATGGCTATGCACCTGTTCTTCACTGCCACACCTCCCACATTGCTGTCAAGTGTGATGAGCTTGTTACCAAGATTGATAGGCGTTCTGGTAGGGTGACTGAGACGAAGCCCAAATTCCTGATGAATGGTGATGCTGGTATTATTAAGATGATTCCCACCATGCCGATGGTGGTTGAGACTTTCTCTGAATATCCTCCACTTGGCCGTTTTACTGTCAGGGACAAGCGTCAAACTGTGGCTGTTGGTGTCATCACGGCTGTGGAGAAGAAGGATCCCAGTGGAGGACTTTAG
Protein sequence

>Msa1349310

MIYSLGKHMSSLHLHLIAFIFLCFQGQMGKEKINIVLIGDVDSGKSTTTGHLIYKLGGVDKSVIEKFEKEAAEMGKTSVKYAWILDKLKAERMTIDISYSKFETTKNCCTVIDVPGHKNFIKNMITGTSEADCALLILDSCIGAFEASMSRDGQTMEQVLLAFTLGALDQINEPKRPSDKPLRLPLQNVYKFGGIGTVPVGRVETGVLKPGMEVTFSPTGLTAKVTSVEMHDKPMVDALFTEKPPTEYLPGDYVRFNVENVDVKDLKSGYVASNSKDDPAKEAANFTSQVVVMNHPGKIENGYAPVLHCHTSHIAVKCDELVTKIDRRSGRVTETKPKFLMNGDAGIIKMIPTMPMVVETFSEYPPLGRFTVRDKRQTVAVGVITAVEKKDPSGGL*