AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0177400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177400 MtrunA17_Chr1g0200071 99.554 448 2 0 1 448 1 448 0.0 916
Msa0177400 MtrunA17_Chr1g0200091 99.554 448 2 0 1 448 1 448 0.0 916
Msa0177400 MtrunA17_Chr1g0200121 99.330 448 3 0 1 448 1 448 0.0 915
Msa0177400 MtrunA17_Chr6g0458111 96.652 448 14 1 1 448 1 447 0.0 896
Msa0177400 MtrunA17_Chr6g0458091 96.652 448 14 1 1 448 1 447 0.0 896
Msa0177400 MtrunA17_Chr4g0005781 96.205 448 16 1 1 448 1 447 0.0 890
Msa0177400 MtrunA17_Chr1g0150331 91.353 451 10 2 1 448 1 425 0.0 825
Msa0177400 MtrunA17_Chr1g0193591 81.674 442 81 0 1 442 1 442 0.0 746
Msa0177400 MtrunA17_Chr1g0204031 82.151 437 73 3 1 437 1 432 0.0 736
Msa0177400 MtrunA17_Chr1g0156421 79.263 434 90 0 1 434 1 434 0.0 728
Msa0177400 MtrunA17_Chr8g0340771 79.733 449 89 1 1 447 1 449 0.0 723
Msa0177400 MtrunA17_Chr5g0415391 72.796 397 108 0 39 435 1 397 0.0 595
Msa0177400 MtrunA17_Chr1g0196251 69.727 403 94 2 4 405 5 380 0.0 576
Msa0177400 MtrunA17_Chr8g0336511 78.593 327 69 1 1 326 66 392 0.0 543
Msa0177400 MtrunA17_Chr2g0319341 73.952 334 85 1 102 433 1 334 0.0 516
Msa0177400 MtrunA17_Chr2g0298371 68.923 325 82 2 102 424 1 308 1.91e-161 457
Msa0177400 MtrunA17_Chr1g0210931 63.087 298 56 4 155 447 1 249 1.03e-118 347
Msa0177400 MtrunA17_Chr8g0340371 70.124 241 69 2 1 240 1 239 1.57e-118 346
Msa0177400 MtrunA17_Chr2g0318291 71.681 226 59 3 1 223 1 224 3.14e-112 329
Msa0177400 MtrunA17_Chr6g0483121 37.963 432 254 6 5 428 89 514 4.78e-97 301
Msa0177400 MtrunA17_Chr8g0392641 37.963 432 258 6 4 429 143 570 1.96e-92 290
Msa0177400 MtrunA17_Chr8g0380091 36.028 433 268 6 7 433 275 704 2.08e-91 291
Msa0177400 MtrunA17_Chr1g0204041 86.452 155 21 0 1 155 1 155 1.03e-90 272
Msa0177400 MtrunA17_Chr1g0200111 75.706 177 33 1 264 430 1 177 5.68e-87 263
Msa0177400 MtrunA17_Chr2g0318281 66.010 203 62 1 243 445 5 200 2.07e-84 258
Msa0177400 MtrunA17_Chr1g0156411 81.429 140 26 0 6 145 10 149 1.13e-78 241
Msa0177400 MtrunA17_Chr8g0340361 60.541 185 57 2 264 433 1 184 3.75e-66 210
Msa0177400 MtrunA17_Chr4g0026961 54.639 194 72 4 195 385 32 212 1.72e-58 191
Msa0177400 MtrunA17_Chr4g0026961 76.190 42 10 0 1 42 1 42 6.46e-13 67.8
Msa0177400 MtrunA17_Chr2g0298381 77.778 99 22 0 1 99 1 99 5.87e-48 159
Msa0177400 MtrunA17_Chr8g0341021 76.471 102 24 0 3 104 4 105 1.28e-47 159
Msa0177400 MtrunA17_Chr7g0259481 30.365 438 245 14 3 429 59 447 1.23e-45 164
Msa0177400 MtrunA17_Chr3g0116821 29.955 444 250 15 3 429 88 487 1.24e-40 151
Msa0177400 MtrunA17_Chr1g0211481 79.747 79 16 0 5 83 4 82 3.58e-36 129
Msa0177400 MtrunA17_Chr2g0319351 82.192 73 13 0 5 77 5 77 4.40e-35 125
Msa0177400 MtrunA17_Chr1g0200101 89.231 65 7 0 172 236 49 113 7.50e-35 125
Msa0177400 MtrunA17_Chr1g0200101 73.469 49 13 0 21 69 2 50 9.15e-17 76.3
Msa0177400 MtrunA17_Chr2g0287231 32.389 247 135 6 1 244 10 227 8.62e-31 118
Msa0177400 MtrunA17_Chr8g0341041 67.089 79 26 0 213 291 2 80 8.29e-28 108
Msa0177400 MtrunA17_Chr8g0341041 63.793 58 21 0 375 432 101 158 1.44e-17 80.1
Msa0177400 MtrunA17_Chr7g0261801 69.697 66 17 1 155 220 1 63 4.02e-24 95.9
Msa0177400 MtrunA17_Chr3g0130991 26.471 272 143 9 9 272 85 307 1.05e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177400 AT1G07920.1 95.302 447 20 1 1 447 1 446 0.0 884
Msa0177400 AT1G07940.4 95.302 447 20 1 1 447 1 446 0.0 884
Msa0177400 AT1G07940.1 95.302 447 20 1 1 447 1 446 0.0 884
Msa0177400 AT1G07940.2 95.302 447 20 1 1 447 1 446 0.0 884
Msa0177400 AT1G07940.3 95.302 447 20 1 1 447 1 446 0.0 884
Msa0177400 AT5G60390.3 95.302 447 20 1 1 447 1 446 0.0 884
Msa0177400 AT5G60390.1 95.302 447 20 1 1 447 1 446 0.0 884
Msa0177400 AT5G60390.2 95.302 447 20 1 1 447 1 446 0.0 884
Msa0177400 AT1G07930.1 95.302 447 20 1 1 447 1 446 0.0 884
Msa0177400 AT1G07930.2 98.824 255 3 0 1 255 1 255 0.0 530
Msa0177400 AT1G07930.2 88.034 117 13 1 331 447 254 369 1.13e-65 215
Msa0177400 AT1G18070.1 37.647 425 257 5 5 424 99 520 3.50e-94 294
Msa0177400 AT1G18070.2 37.647 425 257 5 5 424 99 520 3.50e-94 294
Msa0177400 AT1G18070.3 36.927 436 256 6 5 424 99 531 4.09e-91 286
Msa0177400 AT5G10630.1 35.765 425 265 5 7 426 239 660 2.27e-90 288
Msa0177400 AT5G10630.5 35.765 425 265 5 7 426 240 661 2.32e-90 288
Msa0177400 AT5G10630.2 35.765 425 265 5 7 426 240 661 2.32e-90 288
Msa0177400 AT5G10630.3 35.765 425 265 5 7 426 310 731 1.32e-89 288
Msa0177400 AT5G10630.4 35.765 425 265 5 7 426 315 736 1.39e-89 288
Msa0177400 AT1G35550.1 78.641 103 22 0 335 437 1 103 1.62e-53 174
Msa0177400 AT4G02930.1 30.296 439 245 15 3 429 63 452 7.41e-44 160
Msa0177400 AT4G20360.1 30.137 438 257 10 3 429 75 474 1.70e-43 159
Msa0177400 AT4G20360.2 30.137 438 257 10 3 429 75 474 1.70e-43 159
Msa0177400 AT2G31060.3 25.000 264 160 8 9 263 61 295 3.24e-12 68.9
Msa0177400 AT5G08650.1 26.667 270 145 10 9 272 88 310 2.26e-11 66.6
Msa0177400 AT5G08650.2 26.667 270 145 10 9 272 88 310 2.33e-11 66.2
Msa0177400 AT2G31060.2 24.615 260 162 7 9 263 61 291 4.67e-11 65.5

Find 188 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACCATTCTTCAAGAATT+TGG 0.066665 1_4:-64372709 None:intergenic
TAATTCTATCAAATTGTTTC+TGG 0.156599 1_4:+64374369 Msa0177400:three_prime_UTR
ATCATAGTTATTACAATAAA+TGG 0.259832 1_4:+64372955 Msa0177400:three_prime_UTR
TGCTCTACCACTGAGCTATA+AGG 0.259926 1_4:-64371168 None:intergenic
GCTCTCCTTGCTTTCACTCT+TGG 0.289982 1_4:+64371865 Msa0177400:CDS
CAAACTATTACAAATAAAAT+AGG 0.299324 1_4:+64374164 Msa0177400:three_prime_UTR
GTCTACAAGATTGGAGGAAT+TGG 0.315206 1_4:+64372294 Msa0177400:CDS
GCCTCTTAGGCTCATTGATT+TGG 0.315866 1_4:-64372236 None:intergenic
CTTAGTAAACTCAATGAGTT+TGG 0.317766 1_4:+64374258 Msa0177400:three_prime_UTR
TTATTACAATAAATGGTCTT+TGG 0.319176 1_4:+64372962 Msa0177400:three_prime_UTR
TGTCAAGAATGTTGCTGTTA+AGG 0.325240 1_4:+64372470 Msa0177400:CDS
AATTTCTTATTGCTTGAGTT+TGG 0.328852 1_4:-64374071 None:intergenic
TGGACAATGAACAAATAAAT+AGG 0.329863 1_4:+64374278 Msa0177400:three_prime_UTR
TCACCATTCTTCAAGAATTT+GGG 0.331757 1_4:-64372708 None:intergenic
ATAGCCAACCTTCTTCAAAT+AGG 0.332380 1_4:-64372100 None:intergenic
TTGCGCAGCTTTCCTCTTCA+AGG 0.350006 1_4:+64370163 Msa0177400:five_prime_UTR
ATTCCATTTGTTCCCATCTC+TGG 0.368209 1_4:+64372135 Msa0177400:CDS
CTTCTTCTTCAATGCTGACT+TGG 0.371330 1_4:-64372895 None:intergenic
CTCCTTGGCTGGGTCATCCT+TGG 0.371873 1_4:-64372523 None:intergenic
ATATCTACCCTTGGAGTACT+TGG 0.380807 1_4:-64372052 None:intergenic
ACTAAGATTGATAGGCGTTC+TGG 0.382761 1_4:+64372666 Msa0177400:CDS
AATAAATGGTCTTTGGTCCT+TGG 0.384333 1_4:+64372969 Msa0177400:three_prime_UTR
GCTCTAACAGAGGCCCTTCC+TGG 0.389893 1_4:+64372429 Msa0177400:CDS
AAGCTAGCAGCCTCCTTGGC+TGG 0.398839 1_4:-64372534 None:intergenic
GTAGCGGTCCATCAATTTCA+TGG 0.402233 1_4:-64374223 None:intergenic
GGATCCCAGTGGAGGACTTA+AGG 0.415493 1_4:+64372869 Msa0177400:CDS
GCTCTACCACTGAGCTATAA+GGG 0.416492 1_4:-64371167 None:intergenic
GCAAAAGTGACAACCATTCC+AGG 0.418006 1_4:-64372357 None:intergenic
CTCATCATTGATTCCACTAC+TGG 0.419293 1_4:+64371796 Msa0177400:CDS
GAGGTGTGGCAGTCAAGAAC+AGG 0.420700 1_4:-64372612 None:intergenic
ATGAATCACCCTGGCCAGAT+TGG 0.425183 1_4:+64372576 Msa0177400:CDS
CCTGTGGGGCGTGTCGAGAC+TGG 0.431830 1_4:+64372324 Msa0177400:CDS
CACCCTGGCCAGATTGGAAA+TGG 0.432985 1_4:+64372582 Msa0177400:CDS
GCCCCTTCGACTACCACTTC+AGG 0.433104 1_4:+64372269 Msa0177400:CDS
GTCATCGGCCATGTTGACTC+TGG 0.440627 1_4:+64371490 Msa0177400:CDS
AGGACTAATGGGTAAGGAAA+AGG 0.440646 1_4:+64371450 Msa0177400:exon
ACATTCTCATCCTTGCGGCT+AGG 0.443267 1_4:+64370136 Msa0177400:five_prime_UTR
CATTCTCATCCTTGCGGCTA+GGG 0.444010 1_4:+64370137 Msa0177400:five_prime_UTR
AGCGTTCATTCAAGTATGCC+TGG 0.444655 1_4:+64371608 Msa0177400:CDS
GGGCATAGCCATTTCCAATC+TGG 0.448022 1_4:-64372590 None:intergenic
AAACCAGAGATGGGAACAAA+TGG 0.449170 1_4:-64372138 None:intergenic
AAAATAGGTAACATAGATTC+CGG 0.454200 1_4:+64374179 Msa0177400:three_prime_UTR
ACTTCAGTTGTCAGTCCAGT+AGG 0.456008 1_4:-64372381 None:intergenic
CTTCAGGATGTCTACAAGAT+TGG 0.458119 1_4:+64372285 Msa0177400:CDS
GATTCCAACCATGAAATTGA+TGG 0.461383 1_4:+64374215 Msa0177400:three_prime_UTR
AGTCTCAACCACCATGGGCT+TGG 0.462350 1_4:-64372757 None:intergenic
ACCAAATCAATGAGCCTAAG+AGG 0.463105 1_4:+64372235 Msa0177400:CDS
TGGGTCATCCTTGGAGTTTG+AGG 0.465051 1_4:-64372514 None:intergenic
CACAAACCTTGACTGGTACA+AGG 0.466653 1_4:+64372188 Msa0177400:CDS
CTCAACCACCATGGGCTTGG+TGG 0.468734 1_4:-64372754 None:intergenic
TAGGCTCATTGATTTGGTCA+AGG 0.472707 1_4:-64372230 None:intergenic
GGCTTGTCTGAAGGCCTCTT+AGG 0.473139 1_4:-64372249 None:intergenic
TAGCCATTTCCAATCTGGCC+AGG 0.474048 1_4:-64372585 None:intergenic
AGGCTCATTGATTTGGTCAA+GGG 0.475242 1_4:-64372229 None:intergenic
TGCACTGTCATTGATGCCCC+TGG 0.477178 1_4:+64371715 Msa0177400:CDS
TTAATGAAATCCCTGTGTCC+AGG 0.479234 1_4:-64371733 None:intergenic
AGTAAAGCTAGCAGCCTCCT+TGG 0.479718 1_4:-64372538 None:intergenic
AGTCAGCTTTGTTAGATGGC+AGG 0.481378 1_4:-64374097 None:intergenic
TCACCATTGACATTGCTCTC+TGG 0.481623 1_4:+64371668 Msa0177400:CDS
AGCAGGATGATCTATCTAGT+TGG 0.481793 1_4:+64372925 Msa0177400:three_prime_UTR
AGCTTGTTACTAAGATTGAT+AGG 0.481965 1_4:+64372658 Msa0177400:CDS
ACAGTCAGCTTGGGATGTTC+CGG 0.483896 1_4:-64371767 None:intergenic
AGCTAGCAGCCTCCTTGGCT+GGG 0.486002 1_4:-64372533 None:intergenic
GCAGGATGATCTATCTAGTT+GGG 0.489479 1_4:+64372926 Msa0177400:three_prime_UTR
TCATCCTATTTGAAGAAGGT+TGG 0.491235 1_4:+64372096 Msa0177400:CDS
CTTGTACCAGTCAAGGTTTG+TGG 0.492698 1_4:-64372187 None:intergenic
GATTGATAGGCGTTCTGGTA+AGG 0.495592 1_4:+64372671 Msa0177400:CDS
ATCTCCCTCAAAACCAGAGA+TGG 0.496573 1_4:-64372148 None:intergenic
TGAGAACGGCACAGTCAGCT+TGG 0.498317 1_4:-64371777 None:intergenic
CTGACCATCCTTAGAAATAC+CGG 0.501461 1_4:-64371830 None:intergenic
AGTTTCATCCTATTTGAAGA+AGG 0.501588 1_4:+64372092 Msa0177400:CDS
ATCATTGATTCCACTACTGG+TGG 0.502099 1_4:+64371799 Msa0177400:CDS
GAGAACGGCACAGTCAGCTT+GGG 0.505334 1_4:-64371776 None:intergenic
GTCAGCTTTGTTAGATGGCA+GGG 0.505354 1_4:-64374096 None:intergenic
CTTCAGTTGTCAGTCCAGTA+GGG 0.506099 1_4:-64372380 None:intergenic
AATTTCATCATATCTACCCT+TGG 0.508007 1_4:-64372061 None:intergenic
AATGACAGTGCAGTAGTACT+TGG 0.509426 1_4:-64371704 None:intergenic
CATCAAGGCTGTGGAGAAGA+AGG 0.510945 1_4:+64372848 Msa0177400:CDS
AGGAATTGGAACTGTGCCTG+TGG 0.517140 1_4:+64372308 Msa0177400:CDS
GGTCACCTTAAGTCCTCCAC+TGG 0.520286 1_4:-64372874 None:intergenic
GAAGAAGAAGTGAACCGAGC+AGG 0.523086 1_4:+64372908 Msa0177400:exon
CAGGATGTCTACAAGATTGG+AGG 0.523217 1_4:+64372288 Msa0177400:CDS
TCTTCTAAAGAGAGATAAGC+GGG 0.525356 1_4:-64374401 None:intergenic
TAATGAAATCCCTGTGTCCA+GGG 0.528272 1_4:-64371732 None:intergenic
GAGCCCAAATTCTTGAAGAA+TGG 0.528480 1_4:+64372705 Msa0177400:CDS
TCCCACATTGTCACCAGGAA+GGG 0.528721 1_4:-64372442 None:intergenic
CGGTCCATCAATTTCATGGT+TGG 0.529458 1_4:-64374219 None:intergenic
CATTGATGCCCCTGGACACA+GGG 0.535845 1_4:+64371723 Msa0177400:CDS
GGAATTGGAACTGTGCCTGT+GGG 0.536194 1_4:+64372309 Msa0177400:CDS
TCATTGATGCCCCTGGACAC+AGG 0.539611 1_4:+64371722 Msa0177400:CDS
ATAAATAGGAAATACGATCC+TGG 0.539894 1_4:+64374292 Msa0177400:three_prime_UTR
CTTCCAGAGAGCAATGTCAA+TGG 0.541189 1_4:-64371671 None:intergenic
CATATCAACATTGTGGTCAT+CGG 0.541947 1_4:+64371475 Msa0177400:CDS
AGTCGAAGGGGCTTGTCTGA+AGG 0.542120 1_4:-64372258 None:intergenic
CACTTGATCTACAAGCTTGG+AGG 0.545798 1_4:+64371532 Msa0177400:CDS
GGCTTCAAAACCACCAGTAG+TGG 0.551737 1_4:-64371809 None:intergenic
TGTGGCTGTTGGCGTCATCA+AGG 0.552638 1_4:+64372833 Msa0177400:CDS
AAGAGAGAATTACCTTGAAG+AGG 0.552753 1_4:-64370175 None:intergenic
GGTCACTTGATCTACAAGCT+TGG 0.555547 1_4:+64371529 Msa0177400:CDS
CCAGTCTCGACACGCCCCAC+AGG 0.557031 1_4:-64372324 None:intergenic
TCAAGGGCCTCAAGAAGGGT+TGG 0.557590 1_4:-64372213 None:intergenic
TCAACCACCATGGGCTTGGT+GGG 0.557624 1_4:-64372753 None:intergenic
TTGGTCAAGGGCCTCAAGAA+GGG 0.558003 1_4:-64372217 None:intergenic
TTGGACCCTTGTACCAGTCA+AGG 0.558366 1_4:-64372194 None:intergenic
AAGCAAGGAGAGCATGTTCA+CGG 0.559179 1_4:-64371855 None:intergenic
AGCGCTCCACAAACCTTGAC+TGG 0.559246 1_4:+64372181 Msa0177400:CDS
CTCAAGGCTGAACGTGAAAG+AGG 0.559327 1_4:+64371643 Msa0177400:CDS
TTTGGTCAAGGGCCTCAAGA+AGG 0.560467 1_4:-64372218 None:intergenic
TTCTTGAAGAATGGTGATGC+TGG 0.561159 1_4:+64372714 Msa0177400:CDS
GGAATCTCCACTCTATTGAC+CGG 0.562074 1_4:-64374198 None:intergenic
TCTGGGAAATCAACCACCAC+TGG 0.562550 1_4:+64371508 Msa0177400:CDS
GAAGCCGGTATTTCTAAGGA+TGG 0.564413 1_4:+64371826 Msa0177400:CDS
GTAGCATATCCGCAAGACCT+TGG 0.566509 1_4:+64374134 Msa0177400:three_prime_UTR
ACAAACCTTGACTGGTACAA+GGG 0.567625 1_4:+64372189 Msa0177400:CDS
TCATCGGCCATGTTGACTCT+GGG 0.571507 1_4:+64371491 Msa0177400:CDS
TTCATTAAGAACATGATCAC+CGG 0.572337 1_4:+64371748 Msa0177400:CDS
AGCAAGGAGAGCATGTTCAC+GGG 0.572470 1_4:-64371854 None:intergenic
GAGAAAGTCTCAACCACCAT+GGG 0.575954 1_4:-64372762 None:intergenic
ATCCTGAAGTGGTAGTCGAA+GGG 0.576252 1_4:-64372271 None:intergenic
CTTGAGCTTGTCAAGGACCC+AGG 0.577041 1_4:-64371626 None:intergenic
TGAATTGAACCAAGGTCTTG+CGG 0.577239 1_4:-64374143 None:intergenic
TATCTACCCTTGGAGTACTT+GGG 0.580849 1_4:-64372051 None:intergenic
GCATCAGTCTTGTAAACTGA+AGG 0.582139 1_4:+64371188 Msa0177400:five_prime_UTR
TTGACAAGCGTGTCATTGAG+AGG 0.584549 1_4:+64371557 Msa0177400:CDS
ATCCCACATTGTCACCAGGA+AGG 0.585536 1_4:-64372443 None:intergenic
GAGACTGGTGTCATAAAACC+TGG 0.585699 1_4:+64372339 Msa0177400:CDS
CTGGGTCCTTGACAAGCTCA+AGG 0.585742 1_4:+64371627 Msa0177400:CDS
GGCCCTTCCTGGTGACAATG+TGG 0.586985 1_4:+64372440 Msa0177400:CDS
GAGAATGTGAGAGTGGAGAG+TGG 0.588313 1_4:-64370121 None:intergenic
CTGTTAAGGATCTCAAGCGT+GGG 0.589274 1_4:+64372484 Msa0177400:CDS
CATCCTGAAGTGGTAGTCGA+AGG 0.591035 1_4:-64372272 None:intergenic
TTCTCTGAATATCCTCCACT+CGG 0.591172 1_4:+64372780 Msa0177400:CDS
GCCCTTCCTGGTGACAATGT+GGG 0.592402 1_4:+64372441 Msa0177400:CDS
TTGATTTCCCAGAGTCAACA+TGG 0.596206 1_4:-64371498 None:intergenic
TAGATATGATGAAATTGTGA+AGG 0.599770 1_4:+64372068 Msa0177400:CDS
GCATGTCTCTAACAGCAAAA+CGG 0.600985 1_4:-64372803 None:intergenic
CTCCAAGGATGACCCAGCCA+AGG 0.602045 1_4:+64372521 Msa0177400:CDS
GCGTTCATTCAAGTATGCCT+GGG 0.605879 1_4:+64371609 Msa0177400:CDS
GTCACCTTAAGTCCTCCACT+GGG 0.606003 1_4:-64372873 None:intergenic
TCTCCCTCAAAACCAGAGAT+GGG 0.607478 1_4:-64372147 None:intergenic
ATAGATTCCGGTCAATAGAG+TGG 0.610318 1_4:+64374191 Msa0177400:three_prime_UTR
GATGATTCCCACCAAGCCCA+TGG 0.611182 1_4:+64372746 Msa0177400:CDS
TACTACACCCAAGTACTCCA+AGG 0.613862 1_4:+64372044 Msa0177400:CDS
CTCTCACATTCTCATCCTTG+CGG 0.614676 1_4:+64370131 Msa0177400:five_prime_UTR
AAAGGTTCATATCAACATTG+TGG 0.619488 1_4:+64371468 Msa0177400:CDS
CAAGGGTCCAACCCTTCTTG+AGG 0.620566 1_4:+64372206 Msa0177400:CDS
TCACACCAAGAGTGAAAGCA+AGG 0.621193 1_4:-64371870 None:intergenic
ATCTTGTAGACATCCTGAAG+TGG 0.621388 1_4:-64372282 None:intergenic
GCTGTTAAGGATCTCAAGCG+TGG 0.622485 1_4:+64372483 Msa0177400:CDS
TGTTGGCGTCATCAAGGCTG+TGG 0.622557 1_4:+64372839 Msa0177400:CDS
TTCAGTTGTCAGTCCAGTAG+GGG 0.622733 1_4:-64372379 None:intergenic
AGCCATTTCCAATCTGGCCA+GGG 0.623271 1_4:-64372584 None:intergenic
GACAACTGAAGTCAAGTCTG+TGG 0.624055 1_4:+64372392 Msa0177400:CDS
CAAGGATGAGAATGTGAGAG+TGG 0.624166 1_4:-64370128 None:intergenic
ACAGCAAAACGGCCGAGTGG+AGG 0.624787 1_4:-64372792 None:intergenic
TGGTGTCATAAAACCTGGAA+TGG 0.625384 1_4:+64372344 Msa0177400:CDS
TAATAGTTTGAATTGAACCA+AGG 0.627102 1_4:-64374151 None:intergenic
TCCTGAAGTGGTAGTCGAAG+GGG 0.627928 1_4:-64372270 None:intergenic
AGGTGTGGCAGTCAAGAACA+GGG 0.628146 1_4:-64372611 None:intergenic
GTTCAGCCTTGAGCTTGTCA+AGG 0.628494 1_4:-64371633 None:intergenic
GACGAGAAATAGAAATACCA+AGG 0.629840 1_4:-64372986 None:intergenic
GCATCATGAAGCTCTAACAG+AGG 0.633418 1_4:+64372419 Msa0177400:CDS
GTATGTTGCCTCAAACTCCA+AGG 0.633897 1_4:+64372506 Msa0177400:CDS
AGAGAAAGTCTCAACCACCA+TGG 0.641605 1_4:-64372763 None:intergenic
ATGCGTCAAACTGTGGCTGT+TGG 0.643159 1_4:+64372822 Msa0177400:CDS
ACTAGATAGATCATCCTGCT+CGG 0.643222 1_4:-64372922 None:intergenic
TTCTGGTAAGGAGATTGAGA+AGG 0.643722 1_4:+64372683 Msa0177400:CDS
GAATTGGAACTGTGCCTGTG+GGG 0.644316 1_4:+64372310 Msa0177400:CDS
AGTGGAATCAATGATGAGAA+CGG 0.644693 1_4:-64371791 None:intergenic
TAAGAGACAAATAAATGTAG+CGG 0.648524 1_4:-64374239 None:intergenic
TTCTTCTAAAGAGAGATAAG+CGG 0.652423 1_4:-64374402 None:intergenic
AAACTTGACAGCAATGTGAG+AGG 0.653594 1_4:-64372631 None:intergenic
AATGAAATCCCTGTGTCCAG+GGG 0.656838 1_4:-64371731 None:intergenic
TTAAATCCCACATTGTCACC+AGG 0.657091 1_4:-64372447 None:intergenic
AATGATCTGCTGTTGCAACA+AGG 0.659392 1_4:+64371897 Msa0177400:CDS
CAAGGATGACCCAGCCAAGG+AGG 0.659665 1_4:+64372524 Msa0177400:CDS
GAGAAGAAGGATCCCAGTGG+AGG 0.667988 1_4:+64372861 Msa0177400:CDS
ACTACACCCAAGTACTCCAA+GGG 0.678033 1_4:+64372045 Msa0177400:CDS
CTTGTAGATCAAGTGACCAG+TGG 0.682705 1_4:-64371524 None:intergenic
TAGAGACATGCGTCAAACTG+TGG 0.690315 1_4:+64372815 Msa0177400:CDS
CTAACAGCAAAACGGCCGAG+TGG 0.692072 1_4:-64372795 None:intergenic
GTAGATCAAGTGACCAGTGG+TGG 0.699002 1_4:-64371521 None:intergenic
GTGATCATAATGAATCACCC+TGG 0.699056 1_4:+64372567 Msa0177400:CDS
AACTTGCCCTTATAGCTCAG+TGG 0.706507 1_4:+64371161 Msa0177400:five_prime_UTR
GATTCCCACCAAGCCCATGG+TGG 0.723849 1_4:+64372749 Msa0177400:CDS
GGTGTGGCAGTCAAGAACAG+GGG 0.727394 1_4:-64372610 None:intergenic
TGACAGCAATGTGAGAGGTG+TGG 0.729691 1_4:-64372626 None:intergenic
GTGGAGAAGAAGGATCCCAG+TGG 0.734762 1_4:+64372858 Msa0177400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTTTTCTTTTTGATT+TGG + chr1_4:64370310-64370329 Msa0177400:intron 15.0%
!! GATAATTATTGTTATATTGT+TGG + chr1_4:64371058-64371077 Msa0177400:intron 15.0%
!! ATCATAGTTATTACAATAAA+TGG + chr1_4:64372955-64372974 Msa0177400:three_prime_UTR 15.0%
!! CAAACTATTACAAATAAAAT+AGG + chr1_4:64374164-64374183 Msa0177400:three_prime_UTR 15.0%
!! ATTCATAACAACAATTAATC+AGG - chr1_4:64370371-64370390 None:intergenic 20.0%
!! TGTTGTTATGAATTCATATA+CGG + chr1_4:64370378-64370397 Msa0177400:intron 20.0%
!!! AATCGTTTATGTTTTTGAAT+CGG + chr1_4:64370405-64370424 Msa0177400:intron 20.0%
!!! GTTTTAATCTTTTGTTATGA+AGG + chr1_4:64370430-64370449 Msa0177400:intron 20.0%
!!! TTATGAAGGTGTTAATTTTT+GGG + chr1_4:64370444-64370463 Msa0177400:intron 20.0%
!!! TCAATAATGGAATATGTATT+GGG - chr1_4:64370823-64370842 None:intergenic 20.0%
!!! TTGTTTTTTTTCAGCTTTTA+AGG + chr1_4:64371430-64371449 Msa0177400:five_prime_UTR 20.0%
!! AATCAAATATACAACTTCAA+GGG - chr1_4:64371940-64371959 None:intergenic 20.0%
!! TAATCAAATATACAACTTCA+AGG - chr1_4:64371941-64371960 None:intergenic 20.0%
!! TTATTACAATAAATGGTCTT+TGG + chr1_4:64372962-64372981 Msa0177400:three_prime_UTR 20.0%
!!! TTATTTTTGTGTTTATTCCT+TGG + chr1_4:64373211-64373230 Msa0177400:intron 20.0%
!!! TACTTTTTGATATATTCAGA+CGG + chr1_4:64373553-64373572 Msa0177400:intron 20.0%
!!! GTTTGGTTTGATTTATAATA+GGG - chr1_4:64374057-64374076 None:intergenic 20.0%
!!! AGTTTGGTTTGATTTATAAT+AGG - chr1_4:64374058-64374077 None:intergenic 20.0%
!! TAATTCTATCAAATTGTTTC+TGG + chr1_4:64374369-64374388 Msa0177400:three_prime_UTR 20.0%
!!! GTTATGAAGGTGTTAATTTT+TGG + chr1_4:64370443-64370462 Msa0177400:intron 25.0%
!!! TGTGTAAATTTGTTTGCTTT+TGG + chr1_4:64370770-64370789 Msa0177400:intron 25.0%
!!! GTGTAAATTTGTTTGCTTTT+GGG + chr1_4:64370771-64370790 Msa0177400:intron 25.0%
!! GTCAATAATGGAATATGTAT+TGG - chr1_4:64370824-64370843 None:intergenic 25.0%
! TACATATTCCATTATTGACA+TGG + chr1_4:64370825-64370844 Msa0177400:intron 25.0%
! AACTCTGACAAAAAAAAATG+AGG - chr1_4:64371134-64371153 None:intergenic 25.0%
!! TTCCTTTACTATTTTCTTTG+AGG + chr1_4:64371374-64371393 Msa0177400:intron 25.0%
! ATCAAATATACAACTTCAAG+GGG - chr1_4:64371939-64371958 None:intergenic 25.0%
! TAGATATGATGAAATTGTGA+AGG + chr1_4:64372068-64372087 Msa0177400:CDS 25.0%
!! ACTTTTTGATATATTCAGAC+GGG + chr1_4:64373554-64373573 Msa0177400:intron 25.0%
! TAAGTTTACACTTGAATAGA+AGG - chr1_4:64374008-64374027 None:intergenic 25.0%
! AATTTCTTATTGCTTGAGTT+TGG - chr1_4:64374074-64374093 None:intergenic 25.0%
! TAATAGTTTGAATTGAACCA+AGG - chr1_4:64374154-64374173 None:intergenic 25.0%
! AAAATAGGTAACATAGATTC+CGG + chr1_4:64374179-64374198 Msa0177400:three_prime_UTR 25.0%
! TAAGAGACAAATAAATGTAG+CGG - chr1_4:64374242-64374261 None:intergenic 25.0%
! TGGACAATGAACAAATAAAT+AGG + chr1_4:64374278-64374297 Msa0177400:three_prime_UTR 25.0%
!!! AATTATGATTCGCTATTTTG+TGG - chr1_4:64374354-64374373 None:intergenic 25.0%
GTCAACAACACAATATAGAT+TGG - chr1_4:64370578-64370597 None:intergenic 30.0%
AACACACACATACACTTATT+TGG + chr1_4:64370617-64370636 Msa0177400:intron 30.0%
ACACACACATACACTTATTT+GGG + chr1_4:64370618-64370637 Msa0177400:intron 30.0%
CATGCTTCAAAAGAAAAAAG+GGG - chr1_4:64370679-64370698 None:intergenic 30.0%
GCATGCTTCAAAAGAAAAAA+GGG - chr1_4:64370680-64370699 None:intergenic 30.0%
AGCATGCTTCAAAAGAAAAA+AGG - chr1_4:64370681-64370700 None:intergenic 30.0%
! TGCTTGTTGAATTATTGACT+TGG + chr1_4:64370722-64370741 Msa0177400:intron 30.0%
TTCTATCACCATGTCAATAA+TGG - chr1_4:64370836-64370855 None:intergenic 30.0%
TATAAATCAGACATGCAATC+AGG - chr1_4:64370931-64370950 None:intergenic 30.0%
GACCTCAAAGAAAATAGTAA+AGG - chr1_4:64371379-64371398 None:intergenic 30.0%
! TGCTTATGCATAGTTTTCTT+TGG + chr1_4:64371400-64371419 Msa0177400:intron 30.0%
!! TTTCAGCTTTTAAGGACTAA+TGG + chr1_4:64371438-64371457 Msa0177400:exon 30.0%
!! TTCAGCTTTTAAGGACTAAT+GGG + chr1_4:64371439-64371458 Msa0177400:exon 30.0%
AAAGGTTCATATCAACATTG+TGG + chr1_4:64371468-64371487 Msa0177400:CDS 30.0%
TTCATTAAGAACATGATCAC+CGG + chr1_4:64371748-64371767 Msa0177400:CDS 30.0%
AATTTCATCATATCTACCCT+TGG - chr1_4:64372064-64372083 None:intergenic 30.0%
AGTTTCATCCTATTTGAAGA+AGG + chr1_4:64372092-64372111 Msa0177400:CDS 30.0%
! GAACAAATGGAATTTTGTCT+GGG - chr1_4:64372128-64372147 None:intergenic 30.0%
!! AGCTTGTTACTAAGATTGAT+AGG + chr1_4:64372658-64372677 Msa0177400:CDS 30.0%
TCACCATTCTTCAAGAATTT+GGG - chr1_4:64372711-64372730 None:intergenic 30.0%
ATCACCATTCTTCAAGAATT+TGG - chr1_4:64372712-64372731 None:intergenic 30.0%
GAATCATAAGACGATATCTA+AGG - chr1_4:64373412-64373431 None:intergenic 30.0%
! CTTTTGAACTCTATGTAGAA+GGG - chr1_4:64373880-64373899 None:intergenic 30.0%
!! AAAAAGTCAGCTTTGTTAGA+TGG - chr1_4:64374104-64374123 None:intergenic 30.0%
!! ATCTAACAAAGCTGACTTTT+TGG + chr1_4:64374103-64374122 Msa0177400:three_prime_UTR 30.0%
CTTAGTAAACTCAATGAGTT+TGG + chr1_4:64374258-64374277 Msa0177400:three_prime_UTR 30.0%
ATAAATAGGAAATACGATCC+TGG + chr1_4:64374292-64374311 Msa0177400:three_prime_UTR 30.0%
!!! TAGTTTTGATCTCATTATCC+AGG - chr1_4:64374313-64374332 None:intergenic 30.0%
! TTCTTCTAAAGAGAGATAAG+CGG - chr1_4:64374405-64374424 None:intergenic 30.0%
AAGAGAGAATTACCTTGAAG+AGG - chr1_4:64370178-64370197 None:intergenic 35.0%
TGCATGGGATCATTACAAAT+TGG + chr1_4:64370283-64370302 Msa0177400:intron 35.0%
TTACACACACATACTTGTTC+AGG + chr1_4:64370973-64370992 Msa0177400:intron 35.0%
ATTATCATCAGCATGCTTCA+AGG - chr1_4:64371044-64371063 None:intergenic 35.0%
!! CTTTTAAGGACTAATGGGTA+AGG + chr1_4:64371444-64371463 Msa0177400:exon 35.0%
CATATCAACATTGTGGTCAT+CGG + chr1_4:64371475-64371494 Msa0177400:CDS 35.0%
AGTGGAATCAATGATGAGAA+CGG - chr1_4:64371794-64371813 None:intergenic 35.0%
!!! TTTTGAAGCCGGTATTTCTA+AGG + chr1_4:64371822-64371841 Msa0177400:CDS 35.0%
ATCCATCTGTTCAAGATAGA+TGG - chr1_4:64372022-64372041 None:intergenic 35.0%
TCATCCTATTTGAAGAAGGT+TGG + chr1_4:64372096-64372115 Msa0177400:CDS 35.0%
ATAGCCAACCTTCTTCAAAT+AGG - chr1_4:64372103-64372122 None:intergenic 35.0%
! GGAACAAATGGAATTTTGTC+TGG - chr1_4:64372129-64372148 None:intergenic 35.0%
! TGTCAAGAATGTTGCTGTTA+AGG + chr1_4:64372470-64372489 Msa0177400:CDS 35.0%
AATAAATGGTCTTTGGTCCT+TGG + chr1_4:64372969-64372988 Msa0177400:three_prime_UTR 35.0%
GACGAGAAATAGAAATACCA+AGG - chr1_4:64372989-64373008 None:intergenic 35.0%
GAACAAAAGCTAAGAGATGA+AGG - chr1_4:64373044-64373063 None:intergenic 35.0%
!! TTAGCTTTTGTTCTCAGAAC+TGG + chr1_4:64373051-64373070 Msa0177400:intron 35.0%
! TAGCTTTTGTTCTCAGAACT+GGG + chr1_4:64373052-64373071 Msa0177400:intron 35.0%
! GTTGTGTCTAGTTTGAAACT+TGG + chr1_4:64373127-64373146 Msa0177400:intron 35.0%
TCATGTCTGTACTTAAAACC+GGG - chr1_4:64373519-64373538 None:intergenic 35.0%
GTCATGTCTGTACTTAAAAC+CGG - chr1_4:64373520-64373539 None:intergenic 35.0%
! GTGTTGATCTTCTATCTAGT+GGG - chr1_4:64373624-64373643 None:intergenic 35.0%
!! AGTGTTGATCTTCTATCTAG+TGG - chr1_4:64373625-64373644 None:intergenic 35.0%
TAGATAGAAGATCAACACTC+AGG + chr1_4:64373626-64373645 Msa0177400:intron 35.0%
!! CCAAAAGTGTCAAAAGCAAA+TGG - chr1_4:64373836-64373855 None:intergenic 35.0%
!! CCATTTGCTTTTGACACTTT+TGG + chr1_4:64373833-64373852 Msa0177400:intron 35.0%
! CCTTTTGAACTCTATGTAGA+AGG - chr1_4:64373881-64373900 None:intergenic 35.0%
CCTTCTACATAGAGTTCAAA+AGG + chr1_4:64373878-64373897 Msa0177400:intron 35.0%
ATAGCAATGTAATGTCTCCT+AGG + chr1_4:64373907-64373926 Msa0177400:intron 35.0%
!!! ATTGGTTTTGCCATCCAAAA+AGG + chr1_4:64373954-64373973 Msa0177400:intron 35.0%
GATTCCAACCATGAAATTGA+TGG + chr1_4:64374215-64374234 Msa0177400:three_prime_UTR 35.0%
! TCTTCTAAAGAGAGATAAGC+GGG - chr1_4:64374404-64374423 None:intergenic 35.0%
AGCTTATGTACGTGATTGCA+TGG + chr1_4:64370267-64370286 Msa0177400:intron 40.0%
GCTTATGTACGTGATTGCAT+GGG + chr1_4:64370268-64370287 Msa0177400:intron 40.0%
AATAGAGTAGAGTAACGCTG+TGG + chr1_4:64370651-64370670 Msa0177400:intron 40.0%
ATAGAGTAGAGTAACGCTGT+GGG + chr1_4:64370652-64370671 Msa0177400:intron 40.0%
! TTGTTCAGGAACTGACTCAA+TGG + chr1_4:64370987-64371006 Msa0177400:intron 40.0%
! TCAATGGAGTCCTTTTAACC+CGG + chr1_4:64371003-64371022 Msa0177400:intron 40.0%
TCAGCATGCTTCAAGGAAAA+CGG - chr1_4:64371037-64371056 None:intergenic 40.0%
! GCATCAGTCTTGTAAACTGA+AGG + chr1_4:64371188-64371207 Msa0177400:five_prime_UTR 40.0%
! CAAGTCTTATCCCACTAAGT+GGG - chr1_4:64371264-64371283 None:intergenic 40.0%
! AGGACTAATGGGTAAGGAAA+AGG + chr1_4:64371450-64371469 Msa0177400:exon 40.0%
TTGATTTCCCAGAGTCAACA+TGG - chr1_4:64371501-64371520 None:intergenic 40.0%
AATGACAGTGCAGTAGTACT+TGG - chr1_4:64371707-64371726 None:intergenic 40.0%
TAATGAAATCCCTGTGTCCA+GGG - chr1_4:64371735-64371754 None:intergenic 40.0%
TTAATGAAATCCCTGTGTCC+AGG - chr1_4:64371736-64371755 None:intergenic 40.0%
!! CTCATCATTGATTCCACTAC+TGG + chr1_4:64371796-64371815 Msa0177400:CDS 40.0%
!! ATCATTGATTCCACTACTGG+TGG + chr1_4:64371799-64371818 Msa0177400:CDS 40.0%
CTGACCATCCTTAGAAATAC+CGG - chr1_4:64371833-64371852 None:intergenic 40.0%
AATGATCTGCTGTTGCAACA+AGG + chr1_4:64371897-64371916 Msa0177400:CDS 40.0%
TGCCATCTATCTTGAACAGA+TGG + chr1_4:64372017-64372036 Msa0177400:intron 40.0%
! TATCTACCCTTGGAGTACTT+GGG - chr1_4:64372054-64372073 None:intergenic 40.0%
! ATATCTACCCTTGGAGTACT+TGG - chr1_4:64372055-64372074 None:intergenic 40.0%
ATTCCATTTGTTCCCATCTC+TGG + chr1_4:64372135-64372154 Msa0177400:CDS 40.0%
AAACCAGAGATGGGAACAAA+TGG - chr1_4:64372141-64372160 None:intergenic 40.0%
ACAAACCTTGACTGGTACAA+GGG + chr1_4:64372189-64372208 Msa0177400:CDS 40.0%
!! AGGCTCATTGATTTGGTCAA+GGG - chr1_4:64372232-64372251 None:intergenic 40.0%
!! TAGGCTCATTGATTTGGTCA+AGG - chr1_4:64372233-64372252 None:intergenic 40.0%
ACCAAATCAATGAGCCTAAG+AGG + chr1_4:64372235-64372254 Msa0177400:CDS 40.0%
ATCTTGTAGACATCCTGAAG+TGG - chr1_4:64372285-64372304 None:intergenic 40.0%
CTTCAGGATGTCTACAAGAT+TGG + chr1_4:64372285-64372304 Msa0177400:CDS 40.0%
GTCTACAAGATTGGAGGAAT+TGG + chr1_4:64372294-64372313 Msa0177400:CDS 40.0%
!! TGGTGTCATAAAACCTGGAA+TGG + chr1_4:64372344-64372363 Msa0177400:CDS 40.0%
TTAAATCCCACATTGTCACC+AGG - chr1_4:64372450-64372469 None:intergenic 40.0%
GTGATCATAATGAATCACCC+TGG + chr1_4:64372567-64372586 Msa0177400:CDS 40.0%
AAACTTGACAGCAATGTGAG+AGG - chr1_4:64372634-64372653 None:intergenic 40.0%
ACTAAGATTGATAGGCGTTC+TGG + chr1_4:64372666-64372685 Msa0177400:CDS 40.0%
TTCTGGTAAGGAGATTGAGA+AGG + chr1_4:64372683-64372702 Msa0177400:CDS 40.0%
GAGCCCAAATTCTTGAAGAA+TGG + chr1_4:64372705-64372724 Msa0177400:CDS 40.0%
! TTCTTGAAGAATGGTGATGC+TGG + chr1_4:64372714-64372733 Msa0177400:CDS 40.0%
TTCTCTGAATATCCTCCACT+CGG + chr1_4:64372780-64372799 Msa0177400:CDS 40.0%
GCATGTCTCTAACAGCAAAA+CGG - chr1_4:64372806-64372825 None:intergenic 40.0%
! CTTCTTCTTCAATGCTGACT+TGG - chr1_4:64372898-64372917 None:intergenic 40.0%
ACTAGATAGATCATCCTGCT+CGG - chr1_4:64372925-64372944 None:intergenic 40.0%
AGCAGGATGATCTATCTAGT+TGG + chr1_4:64372925-64372944 Msa0177400:three_prime_UTR 40.0%
GCAGGATGATCTATCTAGTT+GGG + chr1_4:64372926-64372945 Msa0177400:three_prime_UTR 40.0%
CAAAAGCTAAGAGATGAAGG+TGG - chr1_4:64373041-64373060 None:intergenic 40.0%
TAAGCAAAGCAGTAAGTTCC+AGG + chr1_4:64373156-64373175 Msa0177400:intron 40.0%
AAGGCTTAAACATCACACCA+AGG - chr1_4:64373231-64373250 None:intergenic 40.0%
TGTGATGTTTAAGCCTTTGC+TGG + chr1_4:64373234-64373253 Msa0177400:intron 40.0%
CCTAAAACATGTACCAGCAA+AGG - chr1_4:64373250-64373269 None:intergenic 40.0%
! CCTTTGCTGGTACATGTTTT+AGG + chr1_4:64373247-64373266 Msa0177400:intron 40.0%
AAAAATTGCCTTCTGTCTCG+TGG - chr1_4:64373294-64373313 None:intergenic 40.0%
! ACGAGACAGAAGGCAATTTT+TGG + chr1_4:64373293-64373312 Msa0177400:intron 40.0%
AGTACAGACATGACTTTGTG+AGG + chr1_4:64373526-64373545 Msa0177400:intron 40.0%
GTACAGACATGACTTTGTGA+GGG + chr1_4:64373527-64373546 Msa0177400:intron 40.0%
TTTGATATATTCAGACGGGC+AGG + chr1_4:64373558-64373577 Msa0177400:intron 40.0%
TTGATATATTCAGACGGGCA+GGG + chr1_4:64373559-64373578 Msa0177400:intron 40.0%
AGGGATATCAGTTAAGAAGG+AGG + chr1_4:64373578-64373597 Msa0177400:intron 40.0%
GGATGTTATGGTGTATGGAT+GGG + chr1_4:64373654-64373673 Msa0177400:intron 40.0%
ATGCTTGTGTAGACTTGACT+GGG + chr1_4:64373689-64373708 Msa0177400:intron 40.0%
AGAACACGCTTTCTCATGTT+TGG - chr1_4:64373792-64373811 None:intergenic 40.0%
AACACAACATGCATAGACCT+AGG - chr1_4:64373927-64373946 None:intergenic 40.0%
CTATGCATGTTGTGTTCACA+AGG + chr1_4:64373931-64373950 Msa0177400:intron 40.0%
CATGTTGTGTTCACAAGGAT+TGG + chr1_4:64373936-64373955 Msa0177400:intron 40.0%
ACACTTGAATAGAAGGCAAG+CGG - chr1_4:64374001-64374020 None:intergenic 40.0%
!! CAAAGCTGACTTTTTGGCAT+AGG + chr1_4:64374109-64374128 Msa0177400:three_prime_UTR 40.0%
TGAATTGAACCAAGGTCTTG+CGG - chr1_4:64374146-64374165 None:intergenic 40.0%
ATAGATTCCGGTCAATAGAG+TGG + chr1_4:64374191-64374210 Msa0177400:three_prime_UTR 40.0%
!!! CGCTATTTTGTGGATTAGAG+AGG - chr1_4:64374344-64374363 None:intergenic 40.0%
CAAGGATGAGAATGTGAGAG+TGG - chr1_4:64370131-64370150 None:intergenic 45.0%
CTCTCACATTCTCATCCTTG+CGG + chr1_4:64370131-64370150 Msa0177400:five_prime_UTR 45.0%
AGCATGCTTCAAGGAAAACG+GGG - chr1_4:64371035-64371054 None:intergenic 45.0%
CAGCATGCTTCAAGGAAAAC+GGG - chr1_4:64371036-64371055 None:intergenic 45.0%
AACTTGCCCTTATAGCTCAG+TGG + chr1_4:64371161-64371180 Msa0177400:five_prime_UTR 45.0%
GCTCTACCACTGAGCTATAA+GGG - chr1_4:64371170-64371189 None:intergenic 45.0%
TGCTCTACCACTGAGCTATA+AGG - chr1_4:64371171-64371190 None:intergenic 45.0%
! CCAAGTCTTATCCCACTAAG+TGG - chr1_4:64371265-64371284 None:intergenic 45.0%
CCACTTAGTGGGATAAGACT+TGG + chr1_4:64371262-64371281 Msa0177400:intron 45.0%
CTTGTAGATCAAGTGACCAG+TGG - chr1_4:64371527-64371546 None:intergenic 45.0%
GGTCACTTGATCTACAAGCT+TGG + chr1_4:64371529-64371548 Msa0177400:CDS 45.0%
CACTTGATCTACAAGCTTGG+AGG + chr1_4:64371532-64371551 Msa0177400:CDS 45.0%
! TTGACAAGCGTGTCATTGAG+AGG + chr1_4:64371557-64371576 Msa0177400:CDS 45.0%
AGCGTTCATTCAAGTATGCC+TGG + chr1_4:64371608-64371627 Msa0177400:CDS 45.0%
GCGTTCATTCAAGTATGCCT+GGG + chr1_4:64371609-64371628 Msa0177400:CDS 45.0%
TCACCATTGACATTGCTCTC+TGG + chr1_4:64371668-64371687 Msa0177400:CDS 45.0%
CTTCCAGAGAGCAATGTCAA+TGG - chr1_4:64371674-64371693 None:intergenic 45.0%
AATGAAATCCCTGTGTCCAG+GGG - chr1_4:64371734-64371753 None:intergenic 45.0%
!!! ACTACTGGTGGTTTTGAAGC+CGG + chr1_4:64371811-64371830 Msa0177400:CDS 45.0%
! GAAGCCGGTATTTCTAAGGA+TGG + chr1_4:64371826-64371845 Msa0177400:CDS 45.0%
! AAGCAAGGAGAGCATGTTCA+CGG - chr1_4:64371858-64371877 None:intergenic 45.0%
TCACACCAAGAGTGAAAGCA+AGG - chr1_4:64371873-64371892 None:intergenic 45.0%
TACTACACCCAAGTACTCCA+AGG + chr1_4:64372044-64372063 Msa0177400:CDS 45.0%
ACTACACCCAAGTACTCCAA+GGG + chr1_4:64372045-64372064 Msa0177400:CDS 45.0%
!!! TGTTCCCATCTCTGGTTTTG+AGG + chr1_4:64372143-64372162 Msa0177400:CDS 45.0%
!!! GTTCCCATCTCTGGTTTTGA+GGG + chr1_4:64372144-64372163 Msa0177400:CDS 45.0%
TCTCCCTCAAAACCAGAGAT+GGG - chr1_4:64372150-64372169 None:intergenic 45.0%
ATCTCCCTCAAAACCAGAGA+TGG - chr1_4:64372151-64372170 None:intergenic 45.0%
CTTGTACCAGTCAAGGTTTG+TGG - chr1_4:64372190-64372209 None:intergenic 45.0%
CACAAACCTTGACTGGTACA+AGG + chr1_4:64372188-64372207 Msa0177400:CDS 45.0%
! GCCTCTTAGGCTCATTGATT+TGG - chr1_4:64372239-64372258 None:intergenic 45.0%
ATCCTGAAGTGGTAGTCGAA+GGG - chr1_4:64372274-64372293 None:intergenic 45.0%
CAGGATGTCTACAAGATTGG+AGG + chr1_4:64372288-64372307 Msa0177400:CDS 45.0%
!! GAGACTGGTGTCATAAAACC+TGG + chr1_4:64372339-64372358 Msa0177400:CDS 45.0%
GCAAAAGTGACAACCATTCC+AGG - chr1_4:64372360-64372379 None:intergenic 45.0%
TTCAGTTGTCAGTCCAGTAG+GGG - chr1_4:64372382-64372401 None:intergenic 45.0%
CTTCAGTTGTCAGTCCAGTA+GGG - chr1_4:64372383-64372402 None:intergenic 45.0%
ACTTCAGTTGTCAGTCCAGT+AGG - chr1_4:64372384-64372403 None:intergenic 45.0%
GACAACTGAAGTCAAGTCTG+TGG + chr1_4:64372392-64372411 Msa0177400:CDS 45.0%
! GCATCATGAAGCTCTAACAG+AGG + chr1_4:64372419-64372438 Msa0177400:CDS 45.0%
CTGTTAAGGATCTCAAGCGT+GGG + chr1_4:64372484-64372503 Msa0177400:CDS 45.0%
GTATGTTGCCTCAAACTCCA+AGG + chr1_4:64372506-64372525 Msa0177400:CDS 45.0%
GATTGATAGGCGTTCTGGTA+AGG + chr1_4:64372671-64372690 Msa0177400:CDS 45.0%
GAGAAAGTCTCAACCACCAT+GGG - chr1_4:64372765-64372784 None:intergenic 45.0%
AGAGAAAGTCTCAACCACCA+TGG - chr1_4:64372766-64372785 None:intergenic 45.0%
TAGAGACATGCGTCAAACTG+TGG + chr1_4:64372815-64372834 Msa0177400:CDS 45.0%
!! AGAACTGGGTTCTAGATCGA+CGG + chr1_4:64373066-64373085 Msa0177400:intron 45.0%
GAAACAAAGTCAGCAAGTCC+TGG - chr1_4:64373177-64373196 None:intergenic 45.0%
GTCAATTACCACGAGACAGA+AGG + chr1_4:64373283-64373302 Msa0177400:intron 45.0%
! CTTCTAGCTATCCCGATTGA+CGG + chr1_4:64373347-64373366 Msa0177400:intron 45.0%
! TTCTAGCTATCCCGATTGAC+GGG + chr1_4:64373348-64373367 Msa0177400:intron 45.0%
AGGATAGTACGATACTCCAC+TGG - chr1_4:64373392-64373411 None:intergenic 45.0%
TCCACTATTCCCTGTTGATG+AGG + chr1_4:64373430-64373449 Msa0177400:intron 45.0%
ACCTCATCAACAGGGAATAG+TGG - chr1_4:64373434-64373453 None:intergenic 45.0%
TTTGCACGCCGTTCATTGTA+AGG + chr1_4:64373488-64373507 Msa0177400:intron 45.0%
GGGAAGCTCCTTACAATGAA+CGG - chr1_4:64373499-64373518 None:intergenic 45.0%
GTTCATTGTAAGGAGCTTCC+CGG + chr1_4:64373498-64373517 Msa0177400:intron 45.0%
GGCAGGGATATCAGTTAAGA+AGG + chr1_4:64373575-64373594 Msa0177400:intron 45.0%
CGGATGTTATGGTGTATGGA+TGG + chr1_4:64373653-64373672 Msa0177400:intron 45.0%
GTTATGGTGTATGGATGGGT+AGG + chr1_4:64373658-64373677 Msa0177400:intron 45.0%
CATGCTTGTGTAGACTTGAC+TGG + chr1_4:64373688-64373707 Msa0177400:intron 45.0%
TGCTTGTGTAGACTTGACTG+GGG + chr1_4:64373690-64373709 Msa0177400:intron 45.0%
TGCCATCCAAAAAGGTCTAG+CGG + chr1_4:64373962-64373981 Msa0177400:intron 45.0%
CACTTGAATAGAAGGCAAGC+GGG - chr1_4:64374000-64374019 None:intergenic 45.0%
!! GTCAGCTTTGTTAGATGGCA+GGG - chr1_4:64374099-64374118 None:intergenic 45.0%
!! AGTCAGCTTTGTTAGATGGC+AGG - chr1_4:64374100-64374119 None:intergenic 45.0%
GGAATCTCCACTCTATTGAC+CGG - chr1_4:64374201-64374220 None:intergenic 45.0%
CGGTCCATCAATTTCATGGT+TGG - chr1_4:64374222-64374241 None:intergenic 45.0%
GTAGCGGTCCATCAATTTCA+TGG - chr1_4:64374226-64374245 None:intergenic 45.0%
GAGAATGTGAGAGTGGAGAG+TGG - chr1_4:64370124-64370143 None:intergenic 50.0%
ACATTCTCATCCTTGCGGCT+AGG + chr1_4:64370136-64370155 Msa0177400:five_prime_UTR 50.0%
CATTCTCATCCTTGCGGCTA+GGG + chr1_4:64370137-64370156 Msa0177400:five_prime_UTR 50.0%
TTGCGCAGCTTTCCTCTTCA+AGG + chr1_4:64370163-64370182 Msa0177400:five_prime_UTR 50.0%
! TGGAGTCCTTTTAACCCGGT+TGG + chr1_4:64371007-64371026 Msa0177400:intron 50.0%
! GGAGTCCTTTTAACCCGGTT+GGG + chr1_4:64371008-64371027 Msa0177400:intron 50.0%
GCATGCTTCAAGGAAAACGG+GGG - chr1_4:64371034-64371053 None:intergenic 50.0%
TTGTTGCCAAGCCCACTTAG+TGG + chr1_4:64371250-64371269 Msa0177400:intron 50.0%
TGTTGCCAAGCCCACTTAGT+GGG + chr1_4:64371251-64371270 Msa0177400:intron 50.0%
! CTTATCCCACTAAGTGGGCT+TGG - chr1_4:64371259-64371278 None:intergenic 50.0%
!! TCATCGGCCATGTTGACTCT+GGG + chr1_4:64371491-64371510 Msa0177400:CDS 50.0%
TCTGGGAAATCAACCACCAC+TGG + chr1_4:64371508-64371527 Msa0177400:CDS 50.0%
GTAGATCAAGTGACCAGTGG+TGG - chr1_4:64371524-64371543 None:intergenic 50.0%
GTTCAGCCTTGAGCTTGTCA+AGG - chr1_4:64371636-64371655 None:intergenic 50.0%
CTCAAGGCTGAACGTGAAAG+AGG + chr1_4:64371643-64371662 Msa0177400:CDS 50.0%
ACAGTCAGCTTGGGATGTTC+CGG - chr1_4:64371770-64371789 None:intergenic 50.0%
GGCTTCAAAACCACCAGTAG+TGG - chr1_4:64371812-64371831 None:intergenic 50.0%
! AGCAAGGAGAGCATGTTCAC+GGG - chr1_4:64371857-64371876 None:intergenic 50.0%
GCTCTCCTTGCTTTCACTCT+TGG + chr1_4:64371865-64371884 Msa0177400:CDS 50.0%
TTGGACCCTTGTACCAGTCA+AGG - chr1_4:64372197-64372216 None:intergenic 50.0%
TTGGTCAAGGGCCTCAAGAA+GGG - chr1_4:64372220-64372239 None:intergenic 50.0%
TTTGGTCAAGGGCCTCAAGA+AGG - chr1_4:64372221-64372240 None:intergenic 50.0%
TCCTGAAGTGGTAGTCGAAG+GGG - chr1_4:64372273-64372292 None:intergenic 50.0%
CATCCTGAAGTGGTAGTCGA+AGG - chr1_4:64372275-64372294 None:intergenic 50.0%
AGGAATTGGAACTGTGCCTG+TGG + chr1_4:64372308-64372327 Msa0177400:CDS 50.0%
GGAATTGGAACTGTGCCTGT+GGG + chr1_4:64372309-64372328 Msa0177400:CDS 50.0%
GAATTGGAACTGTGCCTGTG+GGG + chr1_4:64372310-64372329 Msa0177400:CDS 50.0%
!!! GTTGTCACTTTTGCCCCTAC+TGG + chr1_4:64372366-64372385 Msa0177400:CDS 50.0%
TCCCACATTGTCACCAGGAA+GGG - chr1_4:64372445-64372464 None:intergenic 50.0%
ATCCCACATTGTCACCAGGA+AGG - chr1_4:64372446-64372465 None:intergenic 50.0%
GCTGTTAAGGATCTCAAGCG+TGG + chr1_4:64372483-64372502 Msa0177400:CDS 50.0%
TGGGTCATCCTTGGAGTTTG+AGG - chr1_4:64372517-64372536 None:intergenic 50.0%
AGTAAAGCTAGCAGCCTCCT+TGG - chr1_4:64372541-64372560 None:intergenic 50.0%
ATGAATCACCCTGGCCAGAT+TGG + chr1_4:64372576-64372595 Msa0177400:CDS 50.0%
AGCCATTTCCAATCTGGCCA+GGG - chr1_4:64372587-64372606 None:intergenic 50.0%
TAGCCATTTCCAATCTGGCC+AGG - chr1_4:64372588-64372607 None:intergenic 50.0%
GGGCATAGCCATTTCCAATC+TGG - chr1_4:64372593-64372612 None:intergenic 50.0%
AGGTGTGGCAGTCAAGAACA+GGG - chr1_4:64372614-64372633 None:intergenic 50.0%
TGACAGCAATGTGAGAGGTG+TGG - chr1_4:64372629-64372648 None:intergenic 50.0%
ATGCGTCAAACTGTGGCTGT+TGG + chr1_4:64372822-64372841 Msa0177400:CDS 50.0%
CATCAAGGCTGTGGAGAAGA+AGG + chr1_4:64372848-64372867 Msa0177400:CDS 50.0%
GTCACCTTAAGTCCTCCACT+GGG - chr1_4:64372876-64372895 None:intergenic 50.0%
GAAGAAGAAGTGAACCGAGC+AGG + chr1_4:64372908-64372927 Msa0177400:exon 50.0%
TGCTGACCTAACCCGTCAAT+CGG - chr1_4:64373362-64373381 None:intergenic 50.0%
AGGTCAGCATATGTCACCAG+TGG + chr1_4:64373373-64373392 Msa0177400:intron 50.0%
GGCATGCCTTACGACAAACA+GGG - chr1_4:64373460-64373479 None:intergenic 50.0%
AGGCATGCCTTACGACAAAC+AGG - chr1_4:64373461-64373480 None:intergenic 50.0%
TGTTTGTCGTAAGGCATGCC+TGG + chr1_4:64373460-64373479 Msa0177400:intron 50.0%
!! AACGGCGTGCAAAAGTATCC+AGG - chr1_4:64373481-64373500 None:intergenic 50.0%
GTGGGTCAGTCAGAAAGTTC+AGG - chr1_4:64373606-64373625 None:intergenic 50.0%
AAGATCAACACTCAGGCCTG+CGG + chr1_4:64373633-64373652 Msa0177400:intron 50.0%
CCATACACCATAACATCCGC+AGG - chr1_4:64373652-64373671 None:intergenic 50.0%
CCTGCGGATGTTATGGTGTA+TGG + chr1_4:64373649-64373668 Msa0177400:intron 50.0%
ATGGTGTATGGATGGGTAGG+TGG + chr1_4:64373661-64373680 Msa0177400:intron 50.0%
!! CTTTAGAGCTGCCTGTCCTA+CGG - chr1_4:64373750-64373769 None:intergenic 50.0%
AAAGGCTGCGTCAAGCAAAG+TGG + chr1_4:64373766-64373785 Msa0177400:intron 50.0%
!!! TTTTGGTTTCCTAGCACCCG+AGG + chr1_4:64373850-64373869 Msa0177400:intron 50.0%
TATGTAGAAGGGCAAGCCTC+GGG - chr1_4:64373869-64373888 None:intergenic 50.0%
CTATGTAGAAGGGCAAGCCT+CGG - chr1_4:64373870-64373889 None:intergenic 50.0%
GTAGCATATCCGCAAGACCT+TGG + chr1_4:64374134-64374153 Msa0177400:three_prime_UTR 50.0%
CCTCACGCAGGATCGAACTA+CGG - chr1_4:64371215-64371234 None:intergenic 55.0%
CGTAGTTCGATCCTGCGTGA+GGG + chr1_4:64371213-64371232 Msa0177400:intron 55.0%
GAATTGAACTGCCCTCACGC+AGG - chr1_4:64371227-64371246 None:intergenic 55.0%
!! GTCATCGGCCATGTTGACTC+TGG + chr1_4:64371490-64371509 Msa0177400:CDS 55.0%
CTTGAGCTTGTCAAGGACCC+AGG - chr1_4:64371629-64371648 None:intergenic 55.0%
CTGGGTCCTTGACAAGCTCA+AGG + chr1_4:64371627-64371646 Msa0177400:CDS 55.0%
TGCACTGTCATTGATGCCCC+TGG + chr1_4:64371715-64371734 Msa0177400:CDS 55.0%
TCATTGATGCCCCTGGACAC+AGG + chr1_4:64371722-64371741 Msa0177400:CDS 55.0%
CATTGATGCCCCTGGACACA+GGG + chr1_4:64371723-64371742 Msa0177400:CDS 55.0%
GAGAACGGCACAGTCAGCTT+GGG - chr1_4:64371779-64371798 None:intergenic 55.0%
TGAGAACGGCACAGTCAGCT+TGG - chr1_4:64371780-64371799 None:intergenic 55.0%
AGCGCTCCACAAACCTTGAC+TGG + chr1_4:64372181-64372200 Msa0177400:CDS 55.0%
CAAGGGTCCAACCCTTCTTG+AGG + chr1_4:64372206-64372225 Msa0177400:CDS 55.0%
TCAAGGGCCTCAAGAAGGGT+TGG - chr1_4:64372216-64372235 None:intergenic 55.0%
GGCTTGTCTGAAGGCCTCTT+AGG - chr1_4:64372252-64372271 None:intergenic 55.0%
AGTCGAAGGGGCTTGTCTGA+AGG - chr1_4:64372261-64372280 None:intergenic 55.0%
GCCCTTCCTGGTGACAATGT+GGG + chr1_4:64372441-64372460 Msa0177400:CDS 55.0%
CACCCTGGCCAGATTGGAAA+TGG + chr1_4:64372582-64372601 Msa0177400:CDS 55.0%
GGTGTGGCAGTCAAGAACAG+GGG - chr1_4:64372613-64372632 None:intergenic 55.0%
GAGGTGTGGCAGTCAAGAAC+AGG - chr1_4:64372615-64372634 None:intergenic 55.0%
GATGATTCCCACCAAGCCCA+TGG + chr1_4:64372746-64372765 Msa0177400:CDS 55.0%
! TCAACCACCATGGGCTTGGT+GGG - chr1_4:64372756-64372775 None:intergenic 55.0%
AGTCTCAACCACCATGGGCT+TGG - chr1_4:64372760-64372779 None:intergenic 55.0%
CTAACAGCAAAACGGCCGAG+TGG - chr1_4:64372798-64372817 None:intergenic 55.0%
TGTGGCTGTTGGCGTCATCA+AGG + chr1_4:64372833-64372852 Msa0177400:CDS 55.0%
TGTTGGCGTCATCAAGGCTG+TGG + chr1_4:64372839-64372858 Msa0177400:CDS 55.0%
GTGGAGAAGAAGGATCCCAG+TGG + chr1_4:64372858-64372877 Msa0177400:CDS 55.0%
GAGAAGAAGGATCCCAGTGG+AGG + chr1_4:64372861-64372880 Msa0177400:CDS 55.0%
GGATCCCAGTGGAGGACTTA+AGG + chr1_4:64372869-64372888 Msa0177400:CDS 55.0%
GGTCACCTTAAGTCCTCCAC+TGG - chr1_4:64372877-64372896 None:intergenic 55.0%
!! ACTGGGTTCTAGATCGACGG+TGG + chr1_4:64373069-64373088 Msa0177400:intron 55.0%
!! GCTATCCCGATTGACGGGTT+AGG + chr1_4:64373353-64373372 Msa0177400:intron 55.0%
GCTGACCTAACCCGTCAATC+GGG - chr1_4:64373361-64373380 None:intergenic 55.0%
CAGGGCACACCTCATCAACA+GGG - chr1_4:64373442-64373461 None:intergenic 55.0%
ACAGGGCACACCTCATCAAC+AGG - chr1_4:64373443-64373462 None:intergenic 55.0%
GGTGTGCCCTGTTTGTCGTA+AGG + chr1_4:64373451-64373470 Msa0177400:intron 55.0%
ACTCAGGCCTGCGGATGTTA+TGG + chr1_4:64373642-64373661 Msa0177400:intron 55.0%
GACTGGGGTTTCACCACTTG+TGG + chr1_4:64373705-64373724 Msa0177400:intron 55.0%
GGGTTTCACCACTTGTGGAC+TGG + chr1_4:64373710-64373729 Msa0177400:intron 55.0%
!! CACCACTTGTGGACTGGTGT+CGG + chr1_4:64373716-64373735 Msa0177400:intron 55.0%
!! GGTGTCGGACCTTTTACCGT+AGG + chr1_4:64373731-64373750 Msa0177400:intron 55.0%
! CGGACCTTTTACCGTAGGAC+AGG + chr1_4:64373736-64373755 Msa0177400:intron 55.0%
GCTGCCTGTCCTACGGTAAA+AGG - chr1_4:64373743-64373762 None:intergenic 55.0%
! CGTAGGACAGGCAGCTCTAA+AGG + chr1_4:64373748-64373767 Msa0177400:intron 55.0%
! CGCCGCTAGACCTTTTTGGA+TGG - chr1_4:64373967-64373986 None:intergenic 55.0%
GCGCAAAAACCCTAGCCGCA+AGG - chr1_4:64370149-64370168 None:intergenic 60.0%
AAGGAAAACGGGGGCCCAAC+CGG - chr1_4:64371025-64371044 None:intergenic 60.0%
CCGTAGTTCGATCCTGCGTG+AGG + chr1_4:64371212-64371231 Msa0177400:intron 60.0%
GCCCCTTCGACTACCACTTC+AGG + chr1_4:64372269-64372288 Msa0177400:CDS 60.0%
GCTCTAACAGAGGCCCTTCC+TGG + chr1_4:64372429-64372448 Msa0177400:CDS 60.0%
GGCCCTTCCTGGTGACAATG+TGG + chr1_4:64372440-64372459 Msa0177400:CDS 60.0%
CTCCAAGGATGACCCAGCCA+AGG + chr1_4:64372521-64372540 Msa0177400:CDS 60.0%
CTCCTTGGCTGGGTCATCCT+TGG - chr1_4:64372526-64372545 None:intergenic 60.0%
CAAGGATGACCCAGCCAAGG+AGG + chr1_4:64372524-64372543 Msa0177400:CDS 60.0%
AGCTAGCAGCCTCCTTGGCT+GGG - chr1_4:64372536-64372555 None:intergenic 60.0%
AAGCTAGCAGCCTCCTTGGC+TGG - chr1_4:64372537-64372556 None:intergenic 60.0%
GATTCCCACCAAGCCCATGG+TGG + chr1_4:64372749-64372768 Msa0177400:CDS 60.0%
CTCAACCACCATGGGCTTGG+TGG - chr1_4:64372757-64372776 None:intergenic 60.0%
ACAGCAAAACGGCCGAGTGG+AGG - chr1_4:64372795-64372814 None:intergenic 60.0%
GTCCGACACCAGTCCACAAG+TGG - chr1_4:64373721-64373740 None:intergenic 60.0%
! GCTGCGCCGCTAGACCTTTT+TGG - chr1_4:64373971-64373990 None:intergenic 60.0%
GGGGGCCCAACCGGGTTAAA+AGG - chr1_4:64371016-64371035 None:intergenic 65.0%
AGGAAAACGGGGGCCCAACC+GGG - chr1_4:64371024-64371043 None:intergenic 65.0%
AAGGGCAAGCCTCGGGTGCT+AGG - chr1_4:64373862-64373881 None:intergenic 65.0%
CCAGTCTCGACACGCCCCAC+AGG - chr1_4:64372327-64372346 None:intergenic 70.0%
CCTGTGGGGCGTGTCGAGAC+TGG + chr1_4:64372324-64372343 Msa0177400:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 64370115 64374438 64370115 ID=Msa0177400;Name=Msa0177400
chr1_4 mRNA 64370115 64374438 64370115 ID=Msa0177400-mRNA-1;Parent=Msa0177400;Name=Msa0177400-mRNA-1;_AED=0.12;_eAED=0.12;_QI=161|1|1|1|0.25|0|5|480|448
chr1_4 exon 64370115 64370184 64370115 ID=Msa0177400-mRNA-1:exon:20899;Parent=Msa0177400-mRNA-1
chr1_4 exon 64371150 64371209 64371150 ID=Msa0177400-mRNA-1:exon:20900;Parent=Msa0177400-mRNA-1
chr1_4 exon 64371426 64371918 64371426 ID=Msa0177400-mRNA-1:exon:20901;Parent=Msa0177400-mRNA-1
chr1_4 exon 64372036 64373026 64372036 ID=Msa0177400-mRNA-1:exon:20902;Parent=Msa0177400-mRNA-1
chr1_4 exon 64374065 64374438 64374065 ID=Msa0177400-mRNA-1:exon:20903;Parent=Msa0177400-mRNA-1
chr1_4 five_prime_UTR 64370115 64370184 64370115 ID=Msa0177400-mRNA-1:five_prime_utr;Parent=Msa0177400-mRNA-1
chr1_4 five_prime_UTR 64371150 64371209 64371150 ID=Msa0177400-mRNA-1:five_prime_utr;Parent=Msa0177400-mRNA-1
chr1_4 five_prime_UTR 64371426 64371456 64371426 ID=Msa0177400-mRNA-1:five_prime_utr;Parent=Msa0177400-mRNA-1
chr1_4 CDS 64371457 64371918 64371457 ID=Msa0177400-mRNA-1:cds;Parent=Msa0177400-mRNA-1
chr1_4 CDS 64372036 64372920 64372036 ID=Msa0177400-mRNA-1:cds;Parent=Msa0177400-mRNA-1
chr1_4 three_prime_UTR 64372921 64373026 64372921 ID=Msa0177400-mRNA-1:three_prime_utr;Parent=Msa0177400-mRNA-1
chr1_4 three_prime_UTR 64374065 64374438 64374065 ID=Msa0177400-mRNA-1:three_prime_utr;Parent=Msa0177400-mRNA-1
Gene Sequence

>Msa0177400

ATGGGTAAGGAAAAGGTTCATATCAACATTGTGGTCATCGGCCATGTTGACTCTGGGAAATCAACCACCACTGGTCACTTGATCTACAAGCTTGGAGGTATTGACAAGCGTGTCATTGAGAGGTTTGAGAAAGAAGCTGCTGAGATGAACAAGCGTTCATTCAAGTATGCCTGGGTCCTTGACAAGCTCAAGGCTGAACGTGAAAGAGGTATCACCATTGACATTGCTCTCTGGAAGTTTGAGACAACCAAGTACTACTGCACTGTCATTGATGCCCCTGGACACAGGGATTTCATTAAGAACATGATCACCGGAACATCCCAAGCTGACTGTGCCGTTCTCATCATTGATTCCACTACTGGTGGTTTTGAAGCCGGTATTTCTAAGGATGGTCAGACCCGTGAACATGCTCTCCTTGCTTTCACTCTTGGTGTGAAGCAAATGATCTGCTGTTGCAACAAGATGGATGCTACTACACCCAAGTACTCCAAGGGTAGATATGATGAAATTGTGAAGGAAGTTTCATCCTATTTGAAGAAGGTTGGCTATAACCCAGACAAAATTCCATTTGTTCCCATCTCTGGTTTTGAGGGAGATAACATGATTGAGCGCTCCACAAACCTTGACTGGTACAAGGGTCCAACCCTTCTTGAGGCCCTTGACCAAATCAATGAGCCTAAGAGGCCTTCAGACAAGCCCCTTCGACTACCACTTCAGGATGTCTACAAGATTGGAGGAATTGGAACTGTGCCTGTGGGGCGTGTCGAGACTGGTGTCATAAAACCTGGAATGGTTGTCACTTTTGCCCCTACTGGACTGACAACTGAAGTCAAGTCTGTGGAGATGCATCATGAAGCTCTAACAGAGGCCCTTCCTGGTGACAATGTGGGATTTAATGTCAAGAATGTTGCTGTTAAGGATCTCAAGCGTGGGTATGTTGCCTCAAACTCCAAGGATGACCCAGCCAAGGAGGCTGCTAGCTTTACTTCTCAAGTGATCATAATGAATCACCCTGGCCAGATTGGAAATGGCTATGCCCCTGTTCTTGACTGCCACACCTCTCACATTGCTGTCAAGTTTGCTGAGCTTGTTACTAAGATTGATAGGCGTTCTGGTAAGGAGATTGAGAAGGAGCCCAAATTCTTGAAGAATGGTGATGCTGGTATTATTAAGATGATTCCCACCAAGCCCATGGTGGTTGAGACTTTCTCTGAATATCCTCCACTCGGCCGTTTTGCTGTTAGAGACATGCGTCAAACTGTGGCTGTTGGCGTCATCAAGGCTGTGGAGAAGAAGGATCCCAGTGGAGGACTTAAGGTGACCAAGTCAGCATTGAAGAAGAAGTGA
Protein sequence

>Msa0177400

MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKGRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKEIEKEPKFLKNGDAGIIKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDPSGGLKVTKSALKKK*