Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1350880 | XP_003621144.1 | 99.578 | 237 | 1 | 0 | 1 | 237 | 436 | 672 | 4.81e-167 | 486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1350880 | sp|B9RUN8|GUF1_RICCO | 86.920 | 237 | 31 | 0 | 1 | 237 | 437 | 673 | 7.29e-151 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1350880 | G7KZV0 | 99.578 | 237 | 1 | 0 | 1 | 237 | 436 | 672 | 2.30e-167 | 486 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054480 | Msa1350880 | 0.815478 | 9.057103e-52 | -8.615850e-47 |
| Msa0063530 | Msa1350880 | 0.808219 | 3.448503e-50 | -8.615850e-47 |
| Msa1350880 | Msa1370070 | -0.801962 | 7.028841e-49 | -8.615850e-47 |
| Msa1350880 | Msa1410100 | 0.800653 | 1.303114e-48 | -8.615850e-47 |
| Msa0610430 | Msa1350880 | 0.800914 | 1.152587e-48 | -8.615850e-47 |
| Msa0625720 | Msa1350880 | 0.808004 | 3.832637e-50 | -8.615850e-47 |
| Msa0715470 | Msa1350880 | 0.802791 | 4.744335e-49 | -8.615850e-47 |
| Msa0715700 | Msa1350880 | 0.803487 | 3.405084e-49 | -8.615850e-47 |
| Msa0731940 | Msa1350880 | 0.815607 | 8.476809e-52 | -8.615850e-47 |
| Msa1276890 | Msa1350880 | 0.803906 | 2.786809e-49 | -8.615850e-47 |
| Msa0529890 | Msa1350880 | 0.807081 | 6.016170e-50 | -8.615850e-47 |
| Msa0938220 | Msa1350880 | 0.807001 | 6.256022e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1350880 | MtrunA17_Chr7g0216911 | 99.578 | 237 | 1 | 0 | 1 | 237 | 436 | 672 | 4.43e-171 | 486 |
| Msa1350880 | MtrunA17_Chr3g0130991 | 52.340 | 235 | 110 | 1 | 2 | 236 | 441 | 673 | 9.02e-78 | 247 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1350880 | AT5G39900.1 | 82.278 | 237 | 42 | 0 | 1 | 237 | 427 | 663 | 5.16e-136 | 397 |
| Msa1350880 | AT5G08650.1 | 51.695 | 236 | 112 | 2 | 1 | 236 | 443 | 676 | 2.06e-69 | 225 |
| Msa1350880 | AT5G08650.2 | 44.444 | 171 | 93 | 2 | 1 | 171 | 443 | 611 | 4.59e-39 | 142 |
Find 63 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTATTATGGCGAAATTT+TGG | 0.100738 | tig0011947:-39497 | Msa1350880:three_prime_UTR |
| AGAGGCTAATTTCATTATTA+TGG | 0.189569 | tig0011947:-39508 | Msa1350880:three_prime_UTR |
| TAAAGTTGCGCATTAGATTT+TGG | 0.195694 | tig0011947:-39900 | Msa1350880:intron |
| AATTTACTTTGCTGCTTTCA+TGG | 0.275772 | tig0011947:-39646 | Msa1350880:three_prime_UTR |
| TACACGAAAGAAGAAGCTTT+TGG | 0.312536 | tig0011947:-40027 | Msa1350880:CDS |
| ACGAAACCTTCAATAGTTCA+TGG | 0.351084 | tig0011947:+39937 | None:intergenic |
| TCGGAATACTCATAGATATA+AGG | 0.362737 | tig0011947:+43950 | None:intergenic |
| CTATGCATCATTTGATTATG+AGG | 0.373945 | tig0011947:-41513 | Msa1350880:CDS |
| AGCGTTCCATGAACTATTGA+AGG | 0.411225 | tig0011947:-39943 | Msa1350880:CDS |
| CACCCTTCTCTCTGAGCGTA+GGG | 0.424744 | tig0011947:-43636 | Msa1350880:CDS |
| CAGGCTACCACTCGTTGCTT+GGG | 0.430966 | tig0011947:+43809 | None:intergenic |
| ACAGGCTACCACTCGTTGCT+TGG | 0.433082 | tig0011947:+43808 | None:intergenic |
| GAAGTATCGTCTTCCTTTGA+GGG | 0.433212 | tig0011947:-41582 | Msa1350880:CDS |
| AAACTTGATATTCTCTTGAA+TGG | 0.433950 | tig0011947:-40746 | Msa1350880:CDS |
| ATAAATCGAATAAGAAGAAA+TGG | 0.435027 | tig0011947:-39676 | Msa1350880:three_prime_UTR |
| TGAAGTATCGTCTTCCTTTG+AGG | 0.445367 | tig0011947:-41583 | Msa1350880:CDS |
| GCAACGAGTGGTAGCCTGTT+GGG | 0.445716 | tig0011947:-43804 | Msa1350880:CDS |
| TCAGAGAGAAGGGTGATAAC+AGG | 0.457080 | tig0011947:+43644 | None:intergenic |
| ATGTTTATTACAAAAGATCA+TGG | 0.465871 | tig0011947:+39433 | None:intergenic |
| AATGTTCTTGCCAAGTGTTA+TGG | 0.470456 | tig0011947:-40059 | Msa1350880:CDS |
| TATTACTGTGGGTTCCCAAC+AGG | 0.471236 | tig0011947:+43790 | None:intergenic |
| TGGAGTACTCGTTCATTGAC+AGG | 0.474578 | tig0011947:-43604 | Msa1350880:intron |
| CAGTTATCAACCATCTGATC+TGG | 0.482709 | tig0011947:-40771 | Msa1350880:CDS |
| ATATCGTGTTGGGCGTGAAT+TGG | 0.484300 | tig0011947:-40678 | Msa1350880:CDS |
| GGATTAGACGGTAATGCAGC+AGG | 0.489291 | tig0011947:+43830 | None:intergenic |
| ACTCGAAATCATATCGTGTT+GGG | 0.489815 | tig0011947:-40688 | Msa1350880:CDS |
| TTGTTTGATCTAAGGTATGT+TGG | 0.494037 | tig0011947:-43668 | Msa1350880:intron |
| TTCTTCTTATTCGATTTATG+TGG | 0.499474 | tig0011947:+39680 | None:intergenic |
| CTCAGTTGTGGAATTAGCTA+TGG | 0.501959 | tig0011947:-39709 | Msa1350880:three_prime_UTR |
| AATTGAAGAAAGTCATTGAC+AGG | 0.511476 | tig0011947:-40649 | Msa1350880:intron |
| TAATCATACAAGCCGCCATT+GGG | 0.514147 | tig0011947:-40518 | Msa1350880:CDS |
| AACTCGAAATCATATCGTGT+TGG | 0.515260 | tig0011947:-40689 | Msa1350880:CDS |
| TCACCCTTCTCTCTGAGCGT+AGG | 0.518017 | tig0011947:-43637 | Msa1350880:CDS |
| TCGTGTTGGGCGTGAATTGG+TGG | 0.536800 | tig0011947:-40675 | Msa1350880:CDS |
| CACCCCTACGCTCAGAGAGA+AGG | 0.539680 | tig0011947:+43633 | None:intergenic |
| TTTGTTAATCTACCTTCCAT+CGG | 0.542249 | tig0011947:+43931 | None:intergenic |
| TCAATAACAATTTCCCTCAA+AGG | 0.543263 | tig0011947:+41569 | None:intergenic |
| TGAGCGTAGGGGTGAACAGT+TGG | 0.547250 | tig0011947:-43624 | Msa1350880:CDS |
| CGCTTCTTGTGGTACATCAA+CGG | 0.548934 | tig0011947:+39962 | None:intergenic |
| TCAAGTTTCACCAGATCAGA+TGG | 0.552288 | tig0011947:+40761 | None:intergenic |
| ATAATCATACAAGCCGCCAT+TGG | 0.562406 | tig0011947:-40519 | Msa1350880:CDS |
| TATATCTATGAGTATTCCGA+TGG | 0.567155 | tig0011947:-43964 | Msa1350880:CDS |
| ACCCCTACGCTCAGAGAGAA+GGG | 0.575490 | tig0011947:+43634 | None:intergenic |
| TGATTTCGAGTTATGAACAA+TGG | 0.578989 | tig0011947:+40700 | None:intergenic |
| GAATTGAAGAGTATAACATC+AGG | 0.586284 | tig0011947:-41536 | Msa1350880:CDS |
| TGTGCAAGAGCTTACTCACT+AGG | 0.587619 | tig0011947:+43752 | None:intergenic |
| ACTCGTTGCTTGGGATTAGA+CGG | 0.592284 | tig0011947:+43818 | None:intergenic |
| GTTCTCATAAAACTCAGTTG+TGG | 0.592663 | tig0011947:-39721 | Msa1350880:three_prime_UTR |
| AGCAACGAGTGGTAGCCTGT+TGG | 0.593264 | tig0011947:-43805 | Msa1350880:CDS |
| GATATAAGGCACGGTAGGAA+CGG | 0.596165 | tig0011947:+43964 | None:intergenic |
| AATATCACCACCATAACACT+TGG | 0.596925 | tig0011947:+40049 | None:intergenic |
| AACTATAGTAGCTATTACTG+TGG | 0.603566 | tig0011947:+43778 | None:intergenic |
| TCATAGATATAAGGCACGGT+AGG | 0.607140 | tig0011947:+43959 | None:intergenic |
| GATTGAAACTGAGCTTCAAG+AGG | 0.609012 | tig0011947:-39526 | Msa1350880:three_prime_UTR |
| ACTATAGTAGCTATTACTGT+GGG | 0.615089 | tig0011947:+43779 | None:intergenic |
| AGTTCATGGAACGCTTCTTG+TGG | 0.617418 | tig0011947:+39951 | None:intergenic |
| TCTATGAGTATTCCGATGGA+AGG | 0.618329 | tig0011947:-43960 | Msa1350880:CDS |
| TCTCTTGAATGGTCAAGCAG+TGG | 0.623026 | tig0011947:-40735 | Msa1350880:CDS |
| TGGTCAAGCAGTGGATGCAA+TGG | 0.648929 | tig0011947:-40726 | Msa1350880:CDS |
| GTCTAATCCCAAGCAACGAG+TGG | 0.653785 | tig0011947:-43816 | Msa1350880:CDS |
| ACCCTTCTCTCTGAGCGTAG+GGG | 0.674829 | tig0011947:-43635 | Msa1350880:CDS |
| GTTCTTGCCAAGTGTTATGG+TGG | 0.678954 | tig0011947:-40056 | Msa1350880:CDS |
| ATACTCATAGATATAAGGCA+CGG | 0.704357 | tig0011947:+43955 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAATAAAATAGAAACTT+TGG | + | tig0011947:39821-39840 | None:intergenic | 10.0% |
| !!! | ATTAATTGGTTTTTTGAAAA+GGG | + | tig0011947:40099-40118 | None:intergenic | 15.0% |
| !!! | AATTAATTGGTTTTTTGAAA+AGG | + | tig0011947:40100-40119 | None:intergenic | 15.0% |
| !! | AACAAAAGATAAAATAAAGT+CGG | + | tig0011947:42342-42361 | None:intergenic | 15.0% |
| !! | TTCATTAATTGTTTGATCTA+AGG | - | tig0011947:39708-39727 | Msa1350880:three_prime_UTR | 20.0% |
| !!! | TTTTTTAATAACCTTGCATA+AGG | + | tig0011947:39907-39926 | None:intergenic | 20.0% |
| !! | TCTTGAAAAATGAAAATGTA+GGG | - | tig0011947:40229-40248 | Msa1350880:intron | 20.0% |
| !! | TATATAGAATTGCAAGTTTA+AGG | - | tig0011947:40801-40820 | Msa1350880:intron | 20.0% |
| !! | CCTATTCTAAATCTTTAATT+GGG | + | tig0011947:41263-41282 | None:intergenic | 20.0% |
| !! | AGTTGTTAAATCATTGTTTA+CGG | - | tig0011947:41647-41666 | Msa1350880:intron | 20.0% |
| !!! | CACTTTTTTCTTTTTCTAAT+AGG | + | tig0011947:42189-42208 | None:intergenic | 20.0% |
| !!! | ACATTTTACTCAATGATATA+GGG | - | tig0011947:42260-42279 | Msa1350880:intron | 20.0% |
| !! | TAGTATAAAGCTTATCATAT+TGG | + | tig0011947:42381-42400 | None:intergenic | 20.0% |
| !!! | TGAATTTTAAACATATGAAG+AGG | + | tig0011947:42804-42823 | None:intergenic | 20.0% |
| !!! | AAATCATCTAAATTTTGATC+AGG | - | tig0011947:42830-42849 | Msa1350880:intron | 20.0% |
| !! | ACATTTATACAAGAGTTTAA+AGG | + | tig0011947:42973-42992 | None:intergenic | 20.0% |
| !! | CATAATATCATAACAAAAGA+TGG | + | tig0011947:43576-43595 | None:intergenic | 20.0% |
| !! | CATAAACAAAATGGAAAATA+TGG | + | tig0011947:43620-43639 | None:intergenic | 20.0% |
| !! | ATAAATCGAATAAGAAGAAA+TGG | - | tig0011947:43708-43727 | Msa1350880:intron | 20.0% |
| !! | ATGTTTATTACAAAAGATCA+TGG | + | tig0011947:43954-43973 | None:intergenic | 20.0% |
| ! | ATGACAAATGATGTATTTGT+TGG | - | tig0011947:39869-39888 | Msa1350880:intron | 25.0% |
| ! | TGACAAATGATGTATTTGTT+GGG | - | tig0011947:39870-39889 | Msa1350880:intron | 25.0% |
| ! | TAATATTGGATATCATGTAG+TGG | + | tig0011947:40072-40091 | None:intergenic | 25.0% |
| ! | TTGAAAAGGGAGTTTAATAT+TGG | + | tig0011947:40086-40105 | None:intergenic | 25.0% |
| ! | AGAAAGGAAAAGGAATTAAT+TGG | + | tig0011947:40113-40132 | None:intergenic | 25.0% |
| ! | GTCTTGAAAAATGAAAATGT+AGG | - | tig0011947:40228-40247 | Msa1350880:intron | 25.0% |
| ! | CTTGAAAAATGAAAATGTAG+GGG | - | tig0011947:40230-40249 | Msa1350880:intron | 25.0% |
| !! | GATTTTCATATATAAGCATC+AGG | + | tig0011947:40493-40512 | None:intergenic | 25.0% |
| ! | TGTCAAAATAACCGTTATAA+CGG | - | tig0011947:40665-40684 | Msa1350880:CDS | 25.0% |
| ! | GACAACACTACTTATAAAAT+TGG | - | tig0011947:40748-40767 | Msa1350880:CDS | 25.0% |
| ! | TAAAATTGGTTGTGTAAACA+TGG | - | tig0011947:40762-40781 | Msa1350880:CDS | 25.0% |
| ! | AAAATTGGTTGTGTAAACAT+GGG | - | tig0011947:40763-40782 | Msa1350880:CDS | 25.0% |
| !! | TTATGTACCTCTATCATTTT+AGG | + | tig0011947:40871-40890 | None:intergenic | 25.0% |
| !!! | TTTTGGTTCATTCATTTTGT+TGG | + | tig0011947:41065-41084 | None:intergenic | 25.0% |
| ! | CAAAATGAATGAACCAAAAT+AGG | - | tig0011947:41066-41085 | Msa1350880:intron | 25.0% |
| !! | TCCAATATCGATTATAGATA+TGG | + | tig0011947:41183-41202 | None:intergenic | 25.0% |
| !! | CCCAATTAAAGATTTAGAAT+AGG | - | tig0011947:41260-41279 | Msa1350880:intron | 25.0% |
| ! | GCCTATTCTAAATCTTTAAT+TGG | + | tig0011947:41264-41283 | None:intergenic | 25.0% |
| ! | AACCAACAGAGAATTTAATA+TGG | + | tig0011947:41294-41313 | None:intergenic | 25.0% |
| !! | TCCAAGTCTTATAAGTTATA+AGG | - | tig0011947:41339-41358 | Msa1350880:intron | 25.0% |
| ! | TCCTTATAACTTATAAGACT+TGG | + | tig0011947:41343-41362 | None:intergenic | 25.0% |
| ! | GAATATTTCACAAGTTTACT+TGG | - | tig0011947:41690-41709 | Msa1350880:intron | 25.0% |
| ! | TTGAATTTGATTGTATGAAG+TGG | - | tig0011947:42055-42074 | Msa1350880:intron | 25.0% |
| !!! | TGTATTCTTGTTGTTTGTTA+AGG | - | tig0011947:42086-42105 | Msa1350880:intron | 25.0% |
| !!! | GTATTCTTGTTGTTTGTTAA+GGG | - | tig0011947:42087-42106 | Msa1350880:intron | 25.0% |
| ! | TAATATTTACTCCTTTGTCT+GGG | + | tig0011947:42141-42160 | None:intergenic | 25.0% |
| ! | TTAATATTTACTCCTTTGTC+TGG | + | tig0011947:42142-42161 | None:intergenic | 25.0% |
| !! | CACATTTTACTCAATGATAT+AGG | - | tig0011947:42259-42278 | Msa1350880:intron | 25.0% |
| ! | AGCAAACCATACTATATATT+TGG | - | tig0011947:42545-42564 | Msa1350880:intron | 25.0% |
| ! | AAACTTGATATTCTCTTGAA+TGG | - | tig0011947:42638-42657 | Msa1350880:intron | 25.0% |
| ! | TCGTCATAATATTTATCAAG+AGG | - | tig0011947:43084-43103 | Msa1350880:intron | 25.0% |
| ! | CGTCATAATATTTATCAAGA+GGG | - | tig0011947:43085-43104 | Msa1350880:intron | 25.0% |
| !!! | ATTTTGGTAGATGGATTTTA+AGG | - | tig0011947:43183-43202 | Msa1350880:intron | 25.0% |
| ! | CCTACATAACATAAACAAAA+TGG | + | tig0011947:43629-43648 | None:intergenic | 25.0% |
| !!! | CCATTTTGTTTATGTTATGT+AGG | - | tig0011947:43626-43645 | Msa1350880:CDS | 25.0% |
| ! | TTCTTCTTATTCGATTTATG+TGG | + | tig0011947:43707-43726 | None:intergenic | 25.0% |
| ! | AGAGGCTAATTTCATTATTA+TGG | - | tig0011947:43876-43895 | Msa1350880:intron | 25.0% |
| !! | TCATTATTATGGCGAAATTT+TGG | - | tig0011947:43887-43906 | Msa1350880:intron | 25.0% |
| !! | CATTATTATGGCGAAATTTT+GGG | - | tig0011947:43888-43907 | Msa1350880:intron | 25.0% |
| !! | ATTATTATGGCGAAATTTTG+GGG | - | tig0011947:43889-43908 | Msa1350880:intron | 25.0% |
| ATACTCATAGATATAAGGCA+CGG | + | tig0011947:39432-39451 | None:intergenic | 30.0% | |
| TCGGAATACTCATAGATATA+AGG | + | tig0011947:39437-39456 | None:intergenic | 30.0% | |
| TATATCTATGAGTATTCCGA+TGG | - | tig0011947:39437-39456 | Msa1350880:three_prime_UTR | 30.0% | |
| TTTGTTAATCTACCTTCCAT+CGG | + | tig0011947:39456-39475 | None:intergenic | 30.0% | |
| TGTGCGTTTACTAATATTCT+AGG | - | tig0011947:39500-39519 | Msa1350880:three_prime_UTR | 30.0% | |
| ACTATAGTAGCTATTACTGT+GGG | + | tig0011947:39608-39627 | None:intergenic | 30.0% | |
| AACTATAGTAGCTATTACTG+TGG | + | tig0011947:39609-39628 | None:intergenic | 30.0% | |
| ! | TTGTTTGATCTAAGGTATGT+TGG | - | tig0011947:39716-39735 | Msa1350880:three_prime_UTR | 30.0% |
| ! | TTCATTGACAGGTAAGATTT+TGG | - | tig0011947:39791-39810 | Msa1350880:intron | 30.0% |
| TGTATTATGTTCCTTATGCA+AGG | - | tig0011947:39893-39912 | Msa1350880:intron | 30.0% | |
| !! | ATGCTTTGAAGTAACCAATA+TGG | + | tig0011947:40004-40023 | None:intergenic | 30.0% |
| !!! | GCTGTTTTTGTGCTATTATT+TGG | - | tig0011947:40043-40062 | Msa1350880:CDS | 30.0% |
| AATCTAAACCCAAAAGTCTA+CGG | - | tig0011947:40168-40187 | Msa1350880:intron | 30.0% | |
| !!! | TTTTTCAAGACATATGTCGA+AGG | + | tig0011947:40219-40238 | None:intergenic | 30.0% |
| ! | TCTATCATTTTAGGCATGTT+GGG | + | tig0011947:40862-40881 | None:intergenic | 30.0% |
| TTTGAATTTAGATGCGTCTA+TGG | + | tig0011947:40910-40929 | None:intergenic | 30.0% | |
| ACATTCAACTAAAAAGAGCT+AGG | + | tig0011947:41103-41122 | None:intergenic | 30.0% | |
| ACTTGATCTAGATTATTGAC+TGG | + | tig0011947:41144-41163 | None:intergenic | 30.0% | |
| GCCATATCTATAATCGATAT+TGG | - | tig0011947:41179-41198 | Msa1350880:intron | 30.0% | |
| TGCCATATTAAATTCTCTGT+TGG | - | tig0011947:41289-41308 | Msa1350880:intron | 30.0% | |
| ATAAGTTATAAGGACTCCTT+TGG | - | tig0011947:41349-41368 | Msa1350880:intron | 30.0% | |
| !! | CAAATTTTGGTGAGATAGTT+TGG | - | tig0011947:41588-41607 | Msa1350880:CDS | 30.0% |
| TCAATAACAATTTCCCTCAA+AGG | + | tig0011947:41818-41837 | None:intergenic | 30.0% | |
| ! | GAATTGAAGAGTATAACATC+AGG | - | tig0011947:41848-41867 | Msa1350880:intron | 30.0% |
| CTATGCATCATTTGATTATG+AGG | - | tig0011947:41871-41890 | Msa1350880:intron | 30.0% | |
| ATTGGATGTTAGTGTAAATC+TGG | + | tig0011947:41989-42008 | None:intergenic | 30.0% | |
| AGATTTACACTAACATCCAA+TGG | - | tig0011947:41988-42007 | Msa1350880:intron | 30.0% | |
| GATTTACACTAACATCCAAT+GGG | - | tig0011947:41989-42008 | Msa1350880:intron | 30.0% | |
| CTTATAAGAGTTAGATGACT+AGG | + | tig0011947:42029-42048 | None:intergenic | 30.0% | |
| !! | TTGTTGTTTGTTAAGGGATA+AGG | - | tig0011947:42093-42112 | Msa1350880:intron | 30.0% |
| GCGAATCCAAATATATAGTA+TGG | + | tig0011947:42554-42573 | None:intergenic | 30.0% | |
| CAACCTTACAATGCATTTAA+TGG | - | tig0011947:42581-42600 | Msa1350880:intron | 30.0% | |
| !! | TGATTTCGAGTTATGAACAA+TGG | + | tig0011947:42687-42706 | None:intergenic | 30.0% |
| AATTGAAGAAAGTCATTGAC+AGG | - | tig0011947:42735-42754 | Msa1350880:intron | 30.0% | |
| GCTAATATGTCTGTTTGTAA+TGG | - | tig0011947:42936-42955 | Msa1350880:intron | 30.0% | |
| !! | TAGTCATTTTGCTTTCCAAT+AGG | - | tig0011947:43160-43179 | Msa1350880:intron | 30.0% |
| ! | TTTGCTTTCCAATAGGATTT+TGG | - | tig0011947:43167-43186 | Msa1350880:intron | 30.0% |
| ! | TAAAGTTGCGCATTAGATTT+TGG | - | tig0011947:43484-43503 | Msa1350880:intron | 30.0% |
| !! | AATTTACTTTGCTGCTTTCA+TGG | - | tig0011947:43738-43757 | Msa1350880:intron | 30.0% |
| TGAAGTAACCAATATGGCAT+GGG | + | tig0011947:39998-40017 | None:intergenic | 35.0% | |
| TTGAAGTAACCAATATGGCA+TGG | + | tig0011947:39999-40018 | None:intergenic | 35.0% | |
| AATAGCACAAAAACAGCAAG+TGG | + | tig0011947:40040-40059 | None:intergenic | 35.0% | |
| ! | CCTTTTCCTTTCTTTCCAAA+CGG | - | tig0011947:40120-40139 | Msa1350880:intron | 35.0% |
| AGATTGCGAAGGAGAAAAAA+GGG | + | tig0011947:40153-40172 | None:intergenic | 35.0% | |
| TAGATTGCGAAGGAGAAAAA+AGG | + | tig0011947:40154-40173 | None:intergenic | 35.0% | |
| ! | GATGAAAACCGTAGACTTTT+GGG | + | tig0011947:40179-40198 | None:intergenic | 35.0% |
| ACATATGTCGAAGGAAAAAG+GGG | + | tig0011947:40210-40229 | None:intergenic | 35.0% | |
| GACATATGTCGAAGGAAAAA+GGG | + | tig0011947:40211-40230 | None:intergenic | 35.0% | |
| AGACATATGTCGAAGGAAAA+AGG | + | tig0011947:40212-40231 | None:intergenic | 35.0% | |
| GAAAATGTAGGGGATCTTAT+AGG | - | tig0011947:40240-40259 | Msa1350880:intron | 35.0% | |
| ATGCTATAGCACCGTTATAA+CGG | + | tig0011947:40679-40698 | None:intergenic | 35.0% | |
| ATTGCAAGTTTAAGGACGAT+TGG | - | tig0011947:40809-40828 | Msa1350880:intron | 35.0% | |
| TGGACAAGTCTATCACATAA+TGG | - | tig0011947:40829-40848 | Msa1350880:intron | 35.0% | |
| ! | CTCTATCATTTTAGGCATGT+TGG | + | tig0011947:40863-40882 | None:intergenic | 35.0% |
| CAACATGCCTAAAATGATAG+AGG | - | tig0011947:40861-40880 | Msa1350880:intron | 35.0% | |
| ! | GATAGAGGTACATAAGACAA+TGG | - | tig0011947:40876-40895 | Msa1350880:intron | 35.0% |
| AAACATGAACCCATCTTGAA+AGG | - | tig0011947:40927-40946 | Msa1350880:intron | 35.0% | |
| TGTTCAACTCCTTTCAAGAT+GGG | + | tig0011947:40939-40958 | None:intergenic | 35.0% | |
| TTGTTCAACTCCTTTCAAGA+TGG | + | tig0011947:40940-40959 | None:intergenic | 35.0% | |
| TTCATCTATGTTGAGAGTTG+AGG | + | tig0011947:40988-41007 | None:intergenic | 35.0% | |
| !! | TGGGTTTTGTACATGTTTTC+TGG | + | tig0011947:41019-41038 | None:intergenic | 35.0% |
| ! | GGTTTCAACTCATCCTATTT+TGG | + | tig0011947:41082-41101 | None:intergenic | 35.0% |
| !! | ATCAAGTGTTGAGACTACTT+TGG | - | tig0011947:41157-41176 | Msa1350880:intron | 35.0% |
| ! | GAAGTGTCAACAAATATGAG+CGG | - | tig0011947:41237-41256 | Msa1350880:intron | 35.0% |
| AACATTGTTAAGATCCCACA+AGG | + | tig0011947:41397-41416 | None:intergenic | 35.0% | |
| GATATAGCAAACTGCATTGA+AGG | + | tig0011947:41444-41463 | None:intergenic | 35.0% | |
| ! | ATCTCACCAAAATTTGCTCT+GGG | + | tig0011947:41584-41603 | None:intergenic | 35.0% |
| ! | TATCTCACCAAAATTTGCTC+TGG | + | tig0011947:41585-41604 | None:intergenic | 35.0% |
| TCAATGCTGTCTAATTTGAG+AGG | + | tig0011947:41716-41735 | None:intergenic | 35.0% | |
| !!! | TTTTTTTCTCCTGCAGTCAA+CGG | - | tig0011947:41771-41790 | Msa1350880:intron | 35.0% |
| CAAAACAATAATCATGCAGG+CGG | + | tig0011947:41938-41957 | None:intergenic | 35.0% | |
| GTGCAAAACAATAATCATGC+AGG | + | tig0011947:41941-41960 | None:intergenic | 35.0% | |
| TTTGTTAAGGGATAAGGAGT+TGG | - | tig0011947:42099-42118 | Msa1350880:intron | 35.0% | |
| TCAATGATATAGGGTCTGTT+TGG | - | tig0011947:42269-42288 | Msa1350880:intron | 35.0% | |
| GCATGGTTTGAATCAATGAT+TGG | - | tig0011947:42445-42464 | Msa1350880:intron | 35.0% | |
| CAGCCATTAAATGCATTGTA+AGG | + | tig0011947:42587-42606 | None:intergenic | 35.0% | |
| AACTCGAAATCATATCGTGT+TGG | - | tig0011947:42695-42714 | Msa1350880:intron | 35.0% | |
| ACTCGAAATCATATCGTGTT+GGG | - | tig0011947:42696-42715 | Msa1350880:intron | 35.0% | |
| ! | AATGATTTTTGACCCAATGG+CGG | + | tig0011947:42881-42900 | None:intergenic | 35.0% |
| ! | TGCAATGATTTTTGACCCAA+TGG | + | tig0011947:42884-42903 | None:intergenic | 35.0% |
| TTGGGTCAAAAATCATTGCA+AGG | - | tig0011947:42884-42903 | Msa1350880:intron | 35.0% | |
| TGGGTCAAAAATCATTGCAA+GGG | - | tig0011947:42885-42904 | Msa1350880:intron | 35.0% | |
| GTAAATTCAGGAGAGAGAAT+TGG | - | tig0011947:43007-43026 | Msa1350880:intron | 35.0% | |
| !! | TCCAATAGGATTTTGGTAGA+TGG | - | tig0011947:43174-43193 | Msa1350880:intron | 35.0% |
| TCCATCTACCAAAATCCTAT+TGG | + | tig0011947:43178-43197 | None:intergenic | 35.0% | |
| AATGTTCTTGCCAAGTGTTA+TGG | - | tig0011947:43325-43344 | Msa1350880:intron | 35.0% | |
| AATATCACCACCATAACACT+TGG | + | tig0011947:43338-43357 | None:intergenic | 35.0% | |
| ! | TACACGAAAGAAGAAGCTTT+TGG | - | tig0011947:43357-43376 | Msa1350880:intron | 35.0% |
| !! | TTTTGGAGAAGCAAAAGGAA+GGG | - | tig0011947:43374-43393 | Msa1350880:intron | 35.0% |
| AAAAAGCGAATGAAACGTGT+TGG | - | tig0011947:43397-43416 | Msa1350880:intron | 35.0% | |
| ACGAAACCTTCAATAGTTCA+TGG | + | tig0011947:43450-43469 | None:intergenic | 35.0% | |
| GTTCTCATAAAACTCAGTTG+TGG | - | tig0011947:43663-43682 | Msa1350880:intron | 35.0% | |
| TCATAGATATAAGGCACGGT+AGG | + | tig0011947:39428-39447 | None:intergenic | 40.0% | |
| TCTATGAGTATTCCGATGGA+AGG | - | tig0011947:39441-39460 | Msa1350880:three_prime_UTR | 40.0% | |
| CCGTTTGGAAAGAAAGGAAA+AGG | + | tig0011947:40123-40142 | None:intergenic | 40.0% | |
| TCGAAACCGTTTGGAAAGAA+AGG | + | tig0011947:40129-40148 | None:intergenic | 40.0% | |
| AAAAAGGGTTCGAAACCGTT+TGG | + | tig0011947:40138-40157 | None:intergenic | 40.0% | |
| !!! | CTTTTGGGTTTAGATTGCGA+AGG | + | tig0011947:40164-40183 | None:intergenic | 40.0% |
| ! | GGATGAAAACCGTAGACTTT+TGG | + | tig0011947:40180-40199 | None:intergenic | 40.0% |
| GAAGGAAAAAGGGGAAGAAA+TGG | + | tig0011947:40201-40220 | None:intergenic | 40.0% | |
| TGTATGACGAGATCCAACTT+CGG | - | tig0011947:40387-40406 | Msa1350880:intron | 40.0% | |
| !! | TAACGGTGCTATAGCATTGT+TGG | - | tig0011947:40682-40701 | Msa1350880:CDS | 40.0% |
| GTGTTGTCAATTGTAGATCG+TGG | + | tig0011947:40736-40755 | None:intergenic | 40.0% | |
| AGGTACATAAGACAATGGAG+CGG | - | tig0011947:40881-40900 | Msa1350880:intron | 40.0% | |
| TTGCGTTCATTGCAAACGAT+GGG | + | tig0011947:41038-41057 | None:intergenic | 40.0% | |
| AGTTGAATGTAGCTCCAACA+AGG | - | tig0011947:41113-41132 | Msa1350880:intron | 40.0% | |
| ATTGACTGGATTCTCCTTGT+TGG | + | tig0011947:41130-41149 | None:intergenic | 40.0% | |
| ! | TGTTGGTTGAATCTAGCTGA+AGG | - | tig0011947:41306-41325 | Msa1350880:intron | 40.0% |
| GTTGGTTGAATCTAGCTGAA+GGG | - | tig0011947:41307-41326 | Msa1350880:intron | 40.0% | |
| TTGAGTAGAGATATGGCCAA+AGG | + | tig0011947:41368-41387 | None:intergenic | 40.0% | |
| GCCATATCTCTACTCAATTG+TGG | - | tig0011947:41371-41390 | Msa1350880:intron | 40.0% | |
| GCCACAATTGAGTAGAGATA+TGG | + | tig0011947:41375-41394 | None:intergenic | 40.0% | |
| AGAATTGAACCTGAGACCTT+AGG | + | tig0011947:41560-41579 | None:intergenic | 40.0% | |
| ! | ATTCTCCCCAGAGCAAATTT+TGG | - | tig0011947:41575-41594 | Msa1350880:CDS | 40.0% |
| ! | TCTCACCAAAATTTGCTCTG+GGG | + | tig0011947:41583-41602 | None:intergenic | 40.0% |
| !!! | TTTTTTCTCCTGCAGTCAAC+GGG | - | tig0011947:41772-41791 | Msa1350880:intron | 40.0% |
| !! | TGAAGTATCGTCTTCCTTTG+AGG | - | tig0011947:41801-41820 | Msa1350880:intron | 40.0% |
| !! | GAAGTATCGTCTTCCTTTGA+GGG | - | tig0011947:41802-41821 | Msa1350880:intron | 40.0% |
| TAATCATGCAGGCGGTTATA+AGG | + | tig0011947:41930-41949 | None:intergenic | 40.0% | |
| TGGTTTAGACTGAAGCAAAC+AGG | + | tig0011947:41969-41988 | None:intergenic | 40.0% | |
| TAAAATGTGCACTGCGCAAT+CGG | + | tig0011947:42248-42267 | None:intergenic | 40.0% | |
| TGCACAACAGAGTAACTGTT+TGG | + | tig0011947:42428-42447 | None:intergenic | 40.0% | |
| AACAGTTACTCTGTTGTGCA+TGG | - | tig0011947:42428-42447 | Msa1350880:intron | 40.0% | |
| CAGTTATCAACCATCTGATC+TGG | - | tig0011947:42613-42632 | Msa1350880:intron | 40.0% | |
| TCAAGTTTCACCAGATCAGA+TGG | + | tig0011947:42626-42645 | None:intergenic | 40.0% | |
| ATAATCATACAAGCCGCCAT+TGG | - | tig0011947:42865-42884 | Msa1350880:intron | 40.0% | |
| TAATCATACAAGCCGCCATT+GGG | - | tig0011947:42866-42885 | Msa1350880:intron | 40.0% | |
| TGAATTTACGTCACGAAGGT+AGG | + | tig0011947:42996-43015 | None:intergenic | 40.0% | |
| TACCTTCGTGACGTAAATTC+AGG | - | tig0011947:42995-43014 | Msa1350880:intron | 40.0% | |
| AAGTGCATTGCATTTGTCGA+GGG | + | tig0011947:43209-43228 | None:intergenic | 40.0% | |
| !! | GAAGCTTTTGGAGAAGCAAA+AGG | - | tig0011947:43369-43388 | Msa1350880:intron | 40.0% |
| !! | CTTTTGGAGAAGCAAAAGGA+AGG | - | tig0011947:43373-43392 | Msa1350880:intron | 40.0% |
| AGCGTTCCATGAACTATTGA+AGG | - | tig0011947:43441-43460 | Msa1350880:intron | 40.0% | |
| CTCAGTTGTGGAATTAGCTA+TGG | - | tig0011947:43675-43694 | Msa1350880:intron | 40.0% | |
| GATTGAAACTGAGCTTCAAG+AGG | - | tig0011947:43858-43877 | Msa1350880:intron | 40.0% | |
| !!! | TTATGGCGAAATTTTGGGGT+TGG | - | tig0011947:43893-43912 | Msa1350880:intron | 40.0% |
| GATATAAGGCACGGTAGGAA+CGG | + | tig0011947:39423-39442 | None:intergenic | 45.0% | |
| ACTCGTTGCTTGGGATTAGA+CGG | + | tig0011947:39569-39588 | None:intergenic | 45.0% | |
| TATTACTGTGGGTTCCCAAC+AGG | + | tig0011947:39597-39616 | None:intergenic | 45.0% | |
| TGTGCAAGAGCTTACTCACT+AGG | + | tig0011947:39635-39654 | None:intergenic | 45.0% | |
| TCAGAGAGAAGGGTGATAAC+AGG | + | tig0011947:39743-39762 | None:intergenic | 45.0% | |
| ! | TGGAGTACTCGTTCATTGAC+AGG | - | tig0011947:39780-39799 | Msa1350880:intron | 45.0% |
| GATTCGAACCCATGCCATAT+TGG | - | tig0011947:39987-40006 | Msa1350880:CDS | 45.0% | |
| ! | AAAAACAGCAAGTGGCTTGG+TGG | + | tig0011947:40032-40051 | None:intergenic | 45.0% |
| CACAAAAACAGCAAGTGGCT+TGG | + | tig0011947:40035-40054 | None:intergenic | 45.0% | |
| TGAGCAAAACACACCGAAGT+TGG | + | tig0011947:40403-40422 | None:intergenic | 45.0% | |
| GGTACATAAGACAATGGAGC+GGG | - | tig0011947:40882-40901 | Msa1350880:intron | 45.0% | |
| GTTGCGTTCATTGCAAACGA+TGG | + | tig0011947:41039-41058 | None:intergenic | 45.0% | |
| TCTCAAAACACCTCATGCTC+AGG | - | tig0011947:41203-41222 | Msa1350880:intron | 45.0% | |
| AAACACCTCATGCTCAGGAT+TGG | - | tig0011947:41208-41227 | Msa1350880:intron | 45.0% | |
| AACACCTCATGCTCAGGATT+GGG | - | tig0011947:41209-41228 | Msa1350880:intron | 45.0% | |
| ! | TCTACTCAATTGTGGCCTTG+TGG | - | tig0011947:41379-41398 | Msa1350880:intron | 45.0% |
| !! | CTACTCAATTGTGGCCTTGT+GGG | - | tig0011947:41380-41399 | Msa1350880:intron | 45.0% |
| !! | TGGTGTTGGTTTGGGATCTT+AGG | - | tig0011947:41524-41543 | Msa1350880:CDS | 45.0% |
| !! | GGTGTTGGTTTGGGATCTTA+GGG | - | tig0011947:41525-41544 | Msa1350880:CDS | 45.0% |
| ATTGAACCTGAGACCTTAGG+AGG | + | tig0011947:41557-41576 | None:intergenic | 45.0% | |
| TAAGGAGAGGCAAAAGGACA+GGG | + | tig0011947:41912-41931 | None:intergenic | 45.0% | |
| ATAAGGAGAGGCAAAAGGAC+AGG | + | tig0011947:41913-41932 | None:intergenic | 45.0% | |
| CGGTTATAAGGAGAGGCAAA+AGG | + | tig0011947:41918-41937 | None:intergenic | 45.0% | |
| TAGACTGAAGCAAACAGGAG+CGG | + | tig0011947:41964-41983 | None:intergenic | 45.0% | |
| GCAAAACAGTAGACTCCCAT+TGG | + | tig0011947:42007-42026 | None:intergenic | 45.0% | |
| GTTAAGGGATAAGGAGTTGG+AGG | - | tig0011947:42102-42121 | Msa1350880:intron | 45.0% | |
| TCTCTTGAATGGTCAAGCAG+TGG | - | tig0011947:42649-42668 | Msa1350880:intron | 45.0% | |
| ATATCGTGTTGGGCGTGAAT+TGG | - | tig0011947:42706-42725 | Msa1350880:intron | 45.0% | |
| CTCCTGAATTTACGTCACGA+AGG | + | tig0011947:43000-43019 | None:intergenic | 45.0% | |
| TGCAACCTGTCTCGAAATCT+AGG | + | tig0011947:43112-43131 | None:intergenic | 45.0% | |
| GAAGTGCATTGCATTTGTCG+AGG | + | tig0011947:43210-43229 | None:intergenic | 45.0% | |
| GTTCTTGCCAAGTGTTATGG+TGG | - | tig0011947:43328-43347 | Msa1350880:intron | 45.0% | |
| CGCTTCTTGTGGTACATCAA+CGG | + | tig0011947:43425-43444 | None:intergenic | 45.0% | |
| AGTTCATGGAACGCTTCTTG+TGG | + | tig0011947:43436-43455 | None:intergenic | 45.0% | |
| GGATTAGACGGTAATGCAGC+AGG | + | tig0011947:39557-39576 | None:intergenic | 50.0% | |
| GTCTAATCCCAAGCAACGAG+TGG | - | tig0011947:39568-39587 | Msa1350880:three_prime_UTR | 50.0% | |
| AAACAAACCCGTGCATCGCA+CGG | - | tig0011947:40514-40533 | Msa1350880:CDS | 50.0% | |
| AATGCCCAATCCTGAGCATG+AGG | + | tig0011947:41216-41235 | None:intergenic | 50.0% | |
| ATGCACATACACAGCCCACT+TGG | - | tig0011947:41491-41510 | Msa1350880:intron | 50.0% | |
| TGCACATACACAGCCCACTT+GGG | - | tig0011947:41492-41511 | Msa1350880:intron | 50.0% | |
| ! | CATGAAAACCCGTTGACTGC+AGG | + | tig0011947:41783-41802 | None:intergenic | 50.0% |
| ATGCAGGCGGTTATAAGGAG+AGG | + | tig0011947:41925-41944 | None:intergenic | 50.0% | |
| AGACTGAAGCAAACAGGAGC+GGG | + | tig0011947:41963-41982 | None:intergenic | 50.0% | |
| CTTTGTCTGGGTTTGAACCC+GGG | + | tig0011947:42129-42148 | None:intergenic | 50.0% | |
| CCTTTGTCTGGGTTTGAACC+CGG | + | tig0011947:42130-42149 | None:intergenic | 50.0% | |
| TGGTCAAGCAGTGGATGCAA+TGG | - | tig0011947:42658-42677 | Msa1350880:intron | 50.0% | |
| AGGGTCCTAGATTTCGAGAC+AGG | - | tig0011947:43104-43123 | Msa1350880:intron | 50.0% | |
| CAGGCTACCACTCGTTGCTT+GGG | + | tig0011947:39578-39597 | None:intergenic | 55.0% | |
| ACAGGCTACCACTCGTTGCT+TGG | + | tig0011947:39579-39598 | None:intergenic | 55.0% | |
| AGCAACGAGTGGTAGCCTGT+TGG | - | tig0011947:39579-39598 | Msa1350880:three_prime_UTR | 55.0% | |
| GCAACGAGTGGTAGCCTGTT+GGG | - | tig0011947:39580-39599 | Msa1350880:three_prime_UTR | 55.0% | |
| TCACCCTTCTCTCTGAGCGT+AGG | - | tig0011947:39747-39766 | Msa1350880:intron | 55.0% | |
| CACCCTTCTCTCTGAGCGTA+GGG | - | tig0011947:39748-39767 | Msa1350880:intron | 55.0% | |
| ACCCTTCTCTCTGAGCGTAG+GGG | - | tig0011947:39749-39768 | Msa1350880:intron | 55.0% | |
| ACCCCTACGCTCAGAGAGAA+GGG | + | tig0011947:39753-39772 | None:intergenic | 55.0% | |
| TGAGCGTAGGGGTGAACAGT+TGG | - | tig0011947:39760-39779 | Msa1350880:intron | 55.0% | |
| AACAAACCCGTGCATCGCAC+GGG | - | tig0011947:40515-40534 | Msa1350880:CDS | 55.0% | |
| CATACACAGCCCACTTGGGT+TGG | - | tig0011947:41496-41515 | Msa1350880:intron | 55.0% | |
| !! | TTGGCCTGGTGGTGTTGGTT+TGG | - | tig0011947:41515-41534 | Msa1350880:CDS | 55.0% |
| !! | TGGCCTGGTGGTGTTGGTTT+GGG | - | tig0011947:41516-41535 | Msa1350880:CDS | 55.0% |
| GATCCCAAACCAACACCACC+AGG | + | tig0011947:41522-41541 | None:intergenic | 55.0% | |
| GGATAAGGAGTTGGAGGTCC+CGG | - | tig0011947:42108-42127 | Msa1350880:intron | 55.0% | |
| GATAAGGAGTTGGAGGTCCC+GGG | - | tig0011947:42109-42128 | Msa1350880:intron | 55.0% | |
| CCGGGTTCAAACCCAGACAA+AGG | - | tig0011947:42127-42146 | Msa1350880:intron | 55.0% | |
| TCGTGTTGGGCGTGAATTGG+TGG | - | tig0011947:42709-42728 | Msa1350880:intron | 55.0% | |
| CACCCCTACGCTCAGAGAGA+AGG | + | tig0011947:39754-39773 | None:intergenic | 60.0% | |
| ACCACCAGGCCAACCCAAGT+GGG | + | tig0011947:41508-41527 | None:intergenic | 60.0% | |
| !! | TTGGGTTGGCCTGGTGGTGT+TGG | - | tig0011947:41510-41529 | Msa1350880:CDS | 60.0% |
| CTTAGGGTGCGCTCCTCCTA+AGG | - | tig0011947:41541-41560 | Msa1350880:CDS | 60.0% | |
| TGCGCTCCTCCTAAGGTCTC+AGG | - | tig0011947:41548-41567 | Msa1350880:CDS | 60.0% | |
| AACCCGTGCATCGCACGGGT+CGG | - | tig0011947:40519-40538 | Msa1350880:CDS | 65.0% | |
| !! | ACAGCCCACTTGGGTTGGCC+TGG | - | tig0011947:41501-41520 | Msa1350880:intron | 65.0% |
| CACCACCAGGCCAACCCAAG+TGG | + | tig0011947:41509-41528 | None:intergenic | 65.0% | |
| ACCCGTGCATCGCACGGGTC+GGG | - | tig0011947:40520-40539 | Msa1350880:CDS | 70.0% | |
| ACCCCGACCCGTGCGATGCA+CGG | + | tig0011947:40525-40544 | None:intergenic | 70.0% | |
| !! | GCCCACTTGGGTTGGCCTGG+TGG | - | tig0011947:41504-41523 | Msa1350880:intron | 70.0% |
| CCCCGACCCGTGCGATGCAC+GGG | + | tig0011947:40524-40543 | None:intergenic | 75.0% | |
| CCCGTGCATCGCACGGGTCG+GGG | - | tig0011947:40521-40540 | Msa1350880:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0011947 | gene | 39407 | 43999 | 39407 | ID=Msa1350880;Name=Msa1350880 |
| tig0011947 | mRNA | 39407 | 43999 | 39407 | ID=Msa1350880-mRNA-1;Parent=Msa1350880;Name=Msa1350880-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.85|0.62|1|0.71|0.75|8|386|237 |
| tig0011947 | exon | 39407 | 39758 | 39407 | ID=Msa1350880-mRNA-1:exon:7580;Parent=Msa1350880-mRNA-1 |
| tig0011947 | exon | 39901 | 40100 | 39901 | ID=Msa1350880-mRNA-1:exon:7579;Parent=Msa1350880-mRNA-1 |
| tig0011947 | exon | 40495 | 40554 | 40495 | ID=Msa1350880-mRNA-1:exon:7578;Parent=Msa1350880-mRNA-1 |
| tig0011947 | exon | 40650 | 40790 | 40650 | ID=Msa1350880-mRNA-1:exon:7577;Parent=Msa1350880-mRNA-1 |
| tig0011947 | exon | 41506 | 41619 | 41506 | ID=Msa1350880-mRNA-1:exon:7576;Parent=Msa1350880-mRNA-1 |
| tig0011947 | exon | 43605 | 43676 | 43605 | ID=Msa1350880-mRNA-1:exon:7575;Parent=Msa1350880-mRNA-1 |
| tig0011947 | exon | 43767 | 43871 | 43767 | ID=Msa1350880-mRNA-1:exon:7574;Parent=Msa1350880-mRNA-1 |
| tig0011947 | exon | 43944 | 43999 | 43944 | ID=Msa1350880-mRNA-1:exon:7573;Parent=Msa1350880-mRNA-1 |
| tig0011947 | CDS | 43944 | 43999 | 43944 | ID=Msa1350880-mRNA-1:cds;Parent=Msa1350880-mRNA-1 |
| tig0011947 | CDS | 43767 | 43871 | 43767 | ID=Msa1350880-mRNA-1:cds;Parent=Msa1350880-mRNA-1 |
| tig0011947 | CDS | 43605 | 43676 | 43605 | ID=Msa1350880-mRNA-1:cds;Parent=Msa1350880-mRNA-1 |
| tig0011947 | CDS | 41506 | 41619 | 41506 | ID=Msa1350880-mRNA-1:cds;Parent=Msa1350880-mRNA-1 |
| tig0011947 | CDS | 40650 | 40790 | 40650 | ID=Msa1350880-mRNA-1:cds;Parent=Msa1350880-mRNA-1 |
| tig0011947 | CDS | 40495 | 40554 | 40495 | ID=Msa1350880-mRNA-1:cds;Parent=Msa1350880-mRNA-1 |
| tig0011947 | CDS | 39935 | 40100 | 39935 | ID=Msa1350880-mRNA-1:cds;Parent=Msa1350880-mRNA-1 |
| tig0011947 | three_prime_UTR | 39901 | 39934 | 39901 | ID=Msa1350880-mRNA-1:three_prime_utr;Parent=Msa1350880-mRNA-1 |
| tig0011947 | three_prime_UTR | 39407 | 39758 | 39407 | ID=Msa1350880-mRNA-1:three_prime_utr;Parent=Msa1350880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
