AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1370070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1370070 MtrunA17_Chr4g0042041 98.312 237 4 0 1 237 1 237 2.58e-175 481
Msa1370070 MtrunA17_Chr2g0319301 77.824 239 42 5 1 237 1 230 6.53e-125 353
Msa1370070 MtrunA17_Chr2g0323031 49.805 257 93 6 9 237 12 260 1.25e-74 227
Msa1370070 MtrunA17_Chr1g0167821 44.800 250 110 6 5 237 8 246 4.70e-61 192
Msa1370070 MtrunA17_Chr4g0038511 51.515 99 47 1 76 174 6 103 2.63e-23 95.1
Msa1370070 MtrunA17_Chr1g0161461 36.913 149 78 4 35 174 33 174 1.68e-19 85.9
Msa1370070 MtrunA17_Chr4g0060591 31.852 135 74 3 56 182 17 141 3.12e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1370070 AT5G54680.1 72.385 239 59 3 1 237 1 234 2.97e-119 339
Msa1370070 AT1G51070.1 60.166 241 77 4 1 237 1 226 2.97e-96 281
Msa1370070 AT1G51070.2 67.010 194 55 2 48 237 104 292 1.15e-86 259
Msa1370070 AT3G23210.2 54.348 184 71 5 59 237 116 291 3.99e-55 178
Msa1370070 AT3G23210.1 54.348 184 71 5 59 237 145 320 8.06e-55 178
Msa1370070 AT4G14410.2 52.459 183 76 4 57 237 104 277 8.30e-55 177
Msa1370070 AT4G14410.3 52.459 183 76 4 57 237 104 277 8.30e-55 177
Msa1370070 AT4G14410.1 52.459 183 76 4 57 237 110 283 1.01e-54 177
Msa1370070 AT3G19860.1 35.393 178 80 4 76 224 5 176 4.16e-23 95.1
Msa1370070 AT3G19860.2 35.165 182 83 4 76 228 58 233 8.94e-23 95.1
Msa1370070 AT3G19860.3 35.393 178 80 4 76 224 36 207 9.91e-23 94.7
Msa1370070 AT4G36060.4 36.054 147 84 4 65 207 15 155 9.16e-19 83.2
Msa1370070 AT4G36060.2 36.054 147 84 4 65 207 15 155 1.25e-18 82.8
Msa1370070 AT4G36060.3 36.054 147 84 4 65 207 33 173 2.12e-18 82.4
Msa1370070 AT4G36060.1 36.667 150 82 4 65 210 33 173 2.80e-18 82.0

Find 154 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTGGCATCTTTCAACTTT+TGG 0.148107 tig0019015:+175637 None:intergenic
AGAAAAGATTAAAGAGTTAA+AGG 0.172284 tig0019015:-175604 Msa1370070:intron
GCTGGCTCTGTGCAATTCTT+TGG 0.196795 tig0019015:-175144 Msa1370070:three_prime_UTR
TAATTAATTAATGTATAAAA+TGG 0.226417 tig0019015:+178630 None:intergenic
CAGTGGCTTCCGTTTGTATT+TGG 0.227327 tig0019015:-175046 Msa1370070:three_prime_UTR
GATACAATCTTGAGCTAAAA+TGG 0.237105 tig0019015:+175117 None:intergenic
ATTAATGTATAAAATGGTTC+TGG 0.241509 tig0019015:+178636 None:intergenic
GAATACTTCTGAATTTATTC+TGG 0.257512 tig0019015:-175018 Msa1370070:three_prime_UTR
AACTCCTGGATAACTAATAA+AGG 0.263274 tig0019015:+175242 None:intergenic
ACTGTTTCAGTGGCCTTGTT+TGG 0.290670 tig0019015:+178783 None:intergenic
CTGGCTCTGTGCAATTCTTT+GGG 0.297116 tig0019015:-175143 Msa1370070:three_prime_UTR
GATGGCAGCCTTGTCGGTTT+TGG 0.311125 tig0019015:+175704 None:intergenic
GGGGTTGGTAAGTTTATAAA+AGG 0.329416 tig0019015:-178816 Msa1370070:five_prime_UTR
TTGTTAGTATGTATTCTAAC+TGG 0.331198 tig0019015:-175072 Msa1370070:three_prime_UTR
CCAATTTGTTGCCATGGGCT+TGG 0.333737 tig0019015:+175268 None:intergenic
GAGAATAGAAAGAATGAGAT+TGG 0.335091 tig0019015:+178707 None:intergenic
ATTATTTAAGTATTTCATTC+AGG 0.338216 tig0019015:+174649 None:intergenic
CCAAGCCCATGGCAACAAAT+TGG 0.353392 tig0019015:-175268 Msa1370070:CDS
TCGGTTGCACGAATGAGAAT+TGG 0.358451 tig0019015:+178503 None:intergenic
AAATACTTAAATAATACATT+TGG 0.366035 tig0019015:-174641 Msa1370070:three_prime_UTR
TTCCTTCCTCTGCCTTCACC+TGG 0.374748 tig0019015:-178324 Msa1370070:CDS
CAACTTCTCCCGACATGCTT+TGG 0.380918 tig0019015:+175867 None:intergenic
ACCACAGTGCTCATGGTGCT+TGG 0.383975 tig0019015:-174697 Msa1370070:three_prime_UTR
CATATGGTATGTTGTTGATA+TGG 0.388909 tig0019015:-174753 Msa1370070:three_prime_UTR
TCAACCTTGCTTCCAATGTC+AGG 0.389116 tig0019015:-178285 Msa1370070:intron
GGAAAAGAAAAGAAAAGAAA+AGG 0.403181 tig0019015:+178658 None:intergenic
TCCGAATGGTGACACAGTTA+AGG 0.403203 tig0019015:-175668 Msa1370070:CDS
TGAGAAGAAAGGAGCGAAGA+AGG 0.407623 tig0019015:+178530 None:intergenic
GCTGAAATTGATGGCTCGTT+AGG 0.408473 tig0019015:-176635 Msa1370070:CDS
GTACCCTTTATTAGTTATCC+AGG 0.420242 tig0019015:-175246 Msa1370070:CDS
CTGAAATTGATGGCTCGTTA+GGG 0.421366 tig0019015:-176634 Msa1370070:CDS
CAAGGCAGAGAAAGAGAAGT+TGG 0.426792 tig0019015:-175373 Msa1370070:CDS
TGCCGCAGGGAGTGCGGTGG+CGG 0.429047 tig0019015:+175305 None:intergenic
CGGTTGCACGAATGAGAATT+GGG 0.429378 tig0019015:+178504 None:intergenic
TTTCCCGGGAAAACACGAAT+TGG 0.429457 tig0019015:-178402 Msa1370070:CDS
ACGAATTGGATTAACGATTA+CGG 0.430120 tig0019015:-178388 Msa1370070:CDS
AGTAAAGGCACTATAAAGTT+GGG 0.431953 tig0019015:-178838 Msa1370070:five_prime_UTR
GCTGCTAGTGCTGAAATTGA+TGG 0.434631 tig0019015:-176644 Msa1370070:intron
CGTCCTCCAGTTGCCTAAGC+TGG 0.434808 tig0019015:-175162 Msa1370070:exon
GGGCTGAGTGGGCCAGGTGA+AGG 0.436983 tig0019015:+178312 None:intergenic
TACTAGCTCCAAAGCATGTC+GGG 0.441749 tig0019015:-175875 Msa1370070:CDS
TTAATGTATAAAATGGTTCT+GGG 0.444036 tig0019015:+178637 None:intergenic
CCACAGTGCTCATGGTGCTT+GGG 0.445056 tig0019015:-174696 Msa1370070:three_prime_UTR
CCCTTAACTGTGTCACCATT+CGG 0.446843 tig0019015:+175667 None:intergenic
TCTCGGTACATATCTGAATT+CGG 0.450958 tig0019015:+174793 None:intergenic
TAGGGTACGAAATGGTTTCC+CGG 0.451050 tig0019015:-178417 Msa1370070:exon
CCGAATGGTGACACAGTTAA+GGG 0.454973 tig0019015:-175667 Msa1370070:CDS
AATTGCCACATTGCAACTCC+TGG 0.456516 tig0019015:+175228 None:intergenic
CTAACAAAGCAAGAAGGTAT+TGG 0.457115 tig0019015:+175088 None:intergenic
AATCAGGATGGCAGCCTTGT+CGG 0.459158 tig0019015:+175698 None:intergenic
ACTCCTGGATAACTAATAAA+GGG 0.460680 tig0019015:+175243 None:intergenic
CCATTCGGACAGCATCAATC+AGG 0.463542 tig0019015:+175682 None:intergenic
CCACTGAAACAGTTGATTTG+TGG 0.464239 tig0019015:-178773 Msa1370070:five_prime_UTR
AGGAAGAGCGAAGGTTGAAT+CGG 0.467851 tig0019015:+178342 None:intergenic
TCGTACCCTAGCTACCTTCC+CGG 0.469224 tig0019015:+178430 None:intergenic
CGCGATTCGCTGTCACGCGC+CGG 0.470140 tig0019015:-178449 Msa1370070:five_prime_UTR
ACAGAGCCAGCTTAGGCAAC+TGG 0.474028 tig0019015:+175156 None:intergenic
ATTCGGTTCGTGTGAGTACA+AGG 0.477260 tig0019015:+174810 None:intergenic
TCTGACAGTCTCAAAGAGTC+TGG 0.477676 tig0019015:-176608 Msa1370070:CDS
TATTGAACTAGGCTCCATCT+TGG 0.477914 tig0019015:-175742 Msa1370070:CDS
CCTTGTGCAGCAAATGCCGC+AGG 0.484770 tig0019015:+175291 None:intergenic
CTAGGCTCCATCTTGGAGCC+TGG 0.485022 tig0019015:-175735 Msa1370070:CDS
AGAATAGAAAGAATGAGATT+GGG 0.485836 tig0019015:+178708 None:intergenic
CAAATACAAACGGAAGCCAC+TGG 0.486092 tig0019015:+175047 None:intergenic
AAGTAAAGGCACTATAAAGT+TGG 0.486496 tig0019015:-178839 Msa1370070:five_prime_UTR
GACATTGGAAGCAAGGTTGA+AGG 0.488201 tig0019015:+178288 None:intergenic
TACAAATGTTTAAACAATCA+AGG 0.489822 tig0019015:-174885 Msa1370070:three_prime_UTR
AGGGTACCAATTTGTTGCCA+TGG 0.491389 tig0019015:+175262 None:intergenic
AGCAAGAAGGTATTGGTGAT+AGG 0.493895 tig0019015:+175095 None:intergenic
GGGTACCAATTTGTTGCCAT+GGG 0.498672 tig0019015:+175263 None:intergenic
TTCGCTGTCACGCGCCGGGA+AGG 0.500884 tig0019015:-178444 Msa1370070:five_prime_UTR
GCGAAGGTTGAATCGGGAAC+GGG 0.501622 tig0019015:+178349 None:intergenic
CACGCGCCGGGAAGGTAGCT+AGG 0.504584 tig0019015:-178436 Msa1370070:five_prime_UTR
AACAATCAAGGAATGAAAAG+TGG 0.506211 tig0019015:-174873 Msa1370070:three_prime_UTR
GAAAAGAAAAGAAAAGGGTG+GGG 0.506703 tig0019015:+178664 None:intergenic
GATATTAAACCTCCACGCTC+TGG 0.514052 tig0019015:-174720 Msa1370070:three_prime_UTR
GCAGGGAGTGCGGTGGCGGT+AGG 0.514410 tig0019015:+175309 None:intergenic
GCGATTCGCTGTCACGCGCC+GGG 0.514647 tig0019015:-178448 Msa1370070:five_prime_UTR
ACATTGGAAGCAAGGTTGAA+GGG 0.515771 tig0019015:+178289 None:intergenic
GTGTGGTGTTGAAGTACATA+TGG 0.517533 tig0019015:-174769 Msa1370070:three_prime_UTR
AGTGGGCCAGGTGAAGGCAG+AGG 0.522430 tig0019015:+178318 None:intergenic
AGAAAAGAAAAGAAAAGGGT+GGG 0.522591 tig0019015:+178663 None:intergenic
CTTAAATAATACATTTGGAT+CGG 0.522680 tig0019015:-174636 Msa1370070:three_prime_UTR
GCTCCATCTTGGAGCCTGGA+AGG 0.524851 tig0019015:-175731 Msa1370070:CDS
ATTGTTAGGTTTATTGAACT+AGG 0.530194 tig0019015:-175753 Msa1370070:intron
GCTCTGGACCACAGTGCTCA+TGG 0.532824 tig0019015:-174704 Msa1370070:three_prime_UTR
ATTCATAAGCCAAATACAAA+CGG 0.533567 tig0019015:+175037 None:intergenic
GGAAGAGCGAAGGTTGAATC+GGG 0.533818 tig0019015:+178343 None:intergenic
GAAAAGAAAAGAAAAGAAAA+GGG 0.538588 tig0019015:+178659 None:intergenic
CCTGCGGCATTTGCTGCACA+AGG 0.540694 tig0019015:-175291 Msa1370070:CDS
ATTTATGCCACCTGCTGCAG+TGG 0.547258 tig0019015:-175208 Msa1370070:CDS
TGTGAGGTATCCACTGCAGC+AGG 0.547849 tig0019015:+175198 None:intergenic
AAGGTAGCTAGGGTACGAAA+TGG 0.548343 tig0019015:-178425 Msa1370070:exon
TGGATCGGATGTTGCACCAA+GGG 0.549079 tig0019015:-174621 Msa1370070:three_prime_UTR
ATCAAGGAATGAAAAGTGGA+AGG 0.551396 tig0019015:-174869 Msa1370070:three_prime_UTR
AGGGTACGAAATGGTTTCCC+GGG 0.553844 tig0019015:-178416 Msa1370070:exon
AGCAAATGCCGCAGGGAGTG+CGG 0.555070 tig0019015:+175299 None:intergenic
AAAGTTGAAAGATGCCAACT+CGG 0.556876 tig0019015:-175634 Msa1370070:CDS
GGCAGAGGAAGGAAGAGCGA+AGG 0.557011 tig0019015:+178333 None:intergenic
TACTTCAACACCACACATCT+CGG 0.557939 tig0019015:+174776 None:intergenic
CTACTAGCTCCAAAGCATGT+CGG 0.561189 tig0019015:-175876 Msa1370070:CDS
GAATTGGGAATTGAGAAGAA+AGG 0.565106 tig0019015:+178519 None:intergenic
CATTGGAAGCAAGGTTGAAG+GGG 0.566545 tig0019015:+178290 None:intergenic
GAATTGCACAGAGCCAGCTT+AGG 0.566848 tig0019015:+175149 None:intergenic
AAGAAAAGAAAAGAAAAGGG+TGG 0.572142 tig0019015:+178662 None:intergenic
GTGGCGGTAGGCAAGAAACT+AGG 0.572355 tig0019015:+175321 None:intergenic
GGGTTGGTAAGTTTATAAAA+GGG 0.572812 tig0019015:-178815 Msa1370070:five_prime_UTR
CCACAAATCAACTGTTTCAG+TGG 0.573148 tig0019015:+178773 None:intergenic
GGCCAGGTGAAGGCAGAGGA+AGG 0.573845 tig0019015:+178322 None:intergenic
AGGCCTTCCAGGCTCCAAGA+TGG 0.576941 tig0019015:+175728 None:intergenic
GCTGCACAAGGCCAAGCCCA+TGG 0.577267 tig0019015:-175279 Msa1370070:CDS
AGCGAAGGTTGAATCGGGAA+CGG 0.583174 tig0019015:+178348 None:intergenic
AAGAGTCTGGTTCAAAGAAG+AGG 0.585185 tig0019015:-176595 Msa1370070:intron
AAGCAGACTCAATTGACCCT+TGG 0.588041 tig0019015:+174605 None:intergenic
GAGCACTGTGGTCCAGAGCG+TGG 0.589753 tig0019015:+174708 None:intergenic
AAAAGAAAAGAAAAGGGTGG+GGG 0.590639 tig0019015:+178665 None:intergenic
TGCTGCAGTGGATACCTCAC+AGG 0.591418 tig0019015:-175196 Msa1370070:CDS
GTAAAGGCACTATAAAGTTG+GGG 0.594343 tig0019015:-178837 Msa1370070:five_prime_UTR
ATTGGAAGCAAGGTTGAAGG+GGG 0.596778 tig0019015:+178291 None:intergenic
TTTAAGTATTTCATTCAGGT+AGG 0.597087 tig0019015:+174653 None:intergenic
AAGTTGAAAGATGCCAACTC+GGG 0.605070 tig0019015:-175633 Msa1370070:CDS
CAGACCTGACATTGGAAGCA+AGG 0.608712 tig0019015:+178281 None:intergenic
AAATACAAACGGAAGCCACT+GGG 0.608993 tig0019015:+175048 None:intergenic
TACATACTAACAAAGCAAGA+AGG 0.610881 tig0019015:+175082 None:intergenic
TAAAGGCACTATAAAGTTGG+GGG 0.612334 tig0019015:-178836 Msa1370070:five_prime_UTR
CTTGTGCAGCAAATGCCGCA+GGG 0.618158 tig0019015:+175292 None:intergenic
AATGAGTACAGACCTGACAT+TGG 0.621004 tig0019015:+178273 None:intergenic
ACGCGCCGGGAAGGTAGCTA+GGG 0.621763 tig0019015:-178435 Msa1370070:five_prime_UTR
TGAAATTGATGGCTCGTTAG+GGG 0.622534 tig0019015:-176633 Msa1370070:CDS
TCAAGGAATGAAAAGTGGAA+GGG 0.625572 tig0019015:-174868 Msa1370070:three_prime_UTR
CCTGATTGATGCTGTCCGAA+TGG 0.625819 tig0019015:-175682 Msa1370070:CDS
AAATGCCGCAGGGAGTGCGG+TGG 0.628969 tig0019015:+175302 None:intergenic
TACCGCCACCGCACTCCCTG+CGG 0.632065 tig0019015:-175307 Msa1370070:CDS
AAGGCCTGCCAAAACCGACA+AGG 0.632388 tig0019015:-175712 Msa1370070:CDS
TGACGAGAAACAGAGGCTCA+AGG 0.635039 tig0019015:-175391 Msa1370070:CDS
AGGGTAAGTAAGTCCAAACA+AGG 0.647884 tig0019015:-178796 Msa1370070:five_prime_UTR
TTGGATCGGATGTTGCACCA+AGG 0.650356 tig0019015:-174622 Msa1370070:three_prime_UTR
CGAATGGTGACACAGTTAAG+GGG 0.650749 tig0019015:-175666 Msa1370070:CDS
GAGGTATCCACTGCAGCAGG+TGG 0.651341 tig0019015:+175201 None:intergenic
AACTTCGTGACGAGAAACAG+AGG 0.668282 tig0019015:-175398 Msa1370070:CDS
CACTGTGGTCCAGAGCGTGG+AGG 0.668517 tig0019015:+174711 None:intergenic
TCGGACAGCATCAATCAGGA+TGG 0.668544 tig0019015:+175686 None:intergenic
TTCGGTTCGTGTGAGTACAA+GGG 0.674407 tig0019015:+174811 None:intergenic
GTGCTTGGGTCACTATTGTG+AGG 0.676661 tig0019015:-174682 Msa1370070:three_prime_UTR
GTTATCCAGGAGTTGCAATG+TGG 0.686227 tig0019015:-175233 Msa1370070:CDS
AGGCAAACGATAATCTAGTG+AGG 0.695421 tig0019015:-174952 Msa1370070:three_prime_UTR
GAGCCAGCTTAGGCAACTGG+AGG 0.695906 tig0019015:+175159 None:intergenic
GCGGTAGGCAAGAAACTAGG+TGG 0.707300 tig0019015:+175324 None:intergenic
TGTATTCTAACTGGACCCAG+TGG 0.707527 tig0019015:-175063 Msa1370070:three_prime_UTR
TTGGAAGCAAGGTTGAAGGG+GGG 0.709273 tig0019015:+178292 None:intergenic
AAAGGCACTATAAAGTTGGG+GGG 0.718000 tig0019015:-178835 Msa1370070:five_prime_UTR
CAGATATGTACCGAGATGTG+TGG 0.730683 tig0019015:-174786 Msa1370070:three_prime_UTR
ACGAAGTACATGATCCTGTG+AGG 0.733239 tig0019015:+175182 None:intergenic
CCCAAGCACCATGAGCACTG+TGG 0.763050 tig0019015:+174696 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATGAAAATTATTTCAA+TGG - tig0019015:175724-175743 Msa1370070:CDS 10.0%
!! TTTAAGAAATAAAAATTGAA+GGG + tig0019015:177971-177990 None:intergenic 10.0%
!!! TTTTAAGAAATAAAAATTGA+AGG + tig0019015:177972-177991 None:intergenic 10.0%
!! AAATACTTAAATAATACATT+TGG - tig0019015:178828-178847 Msa1370070:five_prime_UTR 10.0%
!! ATAAATCTCAAATTATCATA+AGG + tig0019015:175357-175376 None:intergenic 15.0%
!!! ATCATTACTCTTATTTAAAA+TGG + tig0019015:176174-176193 None:intergenic 15.0%
!! AATAAGAAATGAGAAAAATA+AGG + tig0019015:176233-176252 None:intergenic 15.0%
!!! TTATTTTTCTCATTTCTTAT+TGG - tig0019015:176232-176251 Msa1370070:intron 15.0%
!!! TATTTTTCTTTACCTAAAAA+AGG - tig0019015:176968-176987 Msa1370070:intron 15.0%
!! GTATTAAAAAACAAATTTCT+AGG - tig0019015:178036-178055 Msa1370070:intron 15.0%
!! ATTATTTAAGTATTTCATTC+AGG + tig0019015:178823-178842 None:intergenic 15.0%
!! GAAAAGAAAAGAAAAGAAAA+GGG + tig0019015:174813-174832 None:intergenic 20.0%
!! TTAATGTATAAAATGGTTCT+GGG + tig0019015:174835-174854 None:intergenic 20.0%
!! ATTAATGTATAAAATGGTTC+TGG + tig0019015:174836-174855 None:intergenic 20.0%
!! TAAAACCCTAATTATGAAAA+GGG + tig0019015:175227-175246 None:intergenic 20.0%
!! TTAAAACCCTAATTATGAAA+AGG + tig0019015:175228-175247 None:intergenic 20.0%
!!! TTTCATAATTAGGGTTTTAA+TGG - tig0019015:175228-175247 Msa1370070:CDS 20.0%
!!! ATTTTTTGTTTCTTACTTCA+CGG - tig0019015:175296-175315 Msa1370070:CDS 20.0%
!! ATGTTGAATTGATAGAATAT+TGG - tig0019015:175431-175450 Msa1370070:intron 20.0%
!!! TGTTTTCATAACAGTTATAT+AGG + tig0019015:175645-175664 None:intergenic 20.0%
!! AAAATTATTTCAATGGAAGT+TGG - tig0019015:175731-175750 Msa1370070:CDS 20.0%
!! TAGGTAAAACTATTTAGAAA+AGG + tig0019015:175909-175928 None:intergenic 20.0%
!!! AAATAGTTTTACCTAAAACT+TGG - tig0019015:175914-175933 Msa1370070:intron 20.0%
!! ATTTGCATTATGGTATTTAT+AGG - tig0019015:176723-176742 Msa1370070:intron 20.0%
!!! AATTGTTTAGTTCAATGAAA+GGG + tig0019015:176923-176942 None:intergenic 20.0%
!!! AAATTGTTTAGTTCAATGAA+AGG + tig0019015:176924-176943 None:intergenic 20.0%
!! AGAATAAAGATAACATGTAT+AGG - tig0019015:177007-177026 Msa1370070:intron 20.0%
!! CAAGTAAAACAAAACATATT+GGG + tig0019015:177081-177100 None:intergenic 20.0%
!! ACAAGTAAAACAAAACATAT+TGG + tig0019015:177082-177101 None:intergenic 20.0%
!! AATCATTATTGTAGTATACA+TGG + tig0019015:177165-177184 None:intergenic 20.0%
!! ATGTATACTACAATAATGAT+TGG - tig0019015:177164-177183 Msa1370070:intron 20.0%
!! AATTGCACTAATAATTAAGT+TGG + tig0019015:177305-177324 None:intergenic 20.0%
!! AAACTACAAGGAAAAATTAA+TGG + tig0019015:177399-177418 None:intergenic 20.0%
!!! TTTTTCCTTGTAGTTTTTTT+AGG - tig0019015:177403-177422 Msa1370070:intron 20.0%
!! CTAACAATGTTCATTATATT+AGG + tig0019015:177704-177723 None:intergenic 20.0%
!! CTAATATAATGAACATTGTT+AGG - tig0019015:177702-177721 Msa1370070:intron 20.0%
!! AGAAAAGATTAAAGAGTTAA+AGG - tig0019015:177865-177884 Msa1370070:intron 20.0%
!!! CGATAATTTTTTCTTGTTTT+TGG - tig0019015:178544-178563 Msa1370070:five_prime_UTR 20.0%
!! TACAAATGTTTAAACAATCA+AGG - tig0019015:178584-178603 Msa1370070:five_prime_UTR 20.0%
!! CTTAAATAATACATTTGGAT+CGG - tig0019015:178833-178852 Msa1370070:five_prime_UTR 20.0%
! AGAATAGAAAGAATGAGATT+GGG + tig0019015:174764-174783 None:intergenic 25.0%
! GGAAAAGAAAAGAAAAGAAA+AGG + tig0019015:174814-174833 None:intergenic 25.0%
!!! TGATTTTGATTTTGAGAATG+AGG + tig0019015:174993-175012 None:intergenic 25.0%
! AAAACCCTAATTATGAAAAG+GGG + tig0019015:175226-175245 None:intergenic 25.0%
!!! TTTTTTGTTTCTTACTTCAC+GGG - tig0019015:175297-175316 Msa1370070:CDS 25.0%
! AAATAATCAAACCATGCAAA+TGG + tig0019015:175539-175558 None:intergenic 25.0%
! TACAAGTAAGTTTCAACAAT+AGG + tig0019015:175772-175791 None:intergenic 25.0%
! AATAGAGGATATTTGAATTC+AGG - tig0019015:175853-175872 Msa1370070:CDS 25.0%
! ATAGAGGATATTTGAATTCA+GGG - tig0019015:175854-175873 Msa1370070:CDS 25.0%
!! TTAGAAAAGGTTTTTCTTGA+TGG + tig0019015:175896-175915 None:intergenic 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - tig0019015:176245-176264 Msa1370070:intron 25.0%
!! CAAATATACAAGTTTTGCAA+AGG + tig0019015:176423-176442 None:intergenic 25.0%
! AAACTTGTATATTTGTGATG+AGG - tig0019015:176428-176447 Msa1370070:intron 25.0%
! ACTACACTACTAAAAAATCT+GGG + tig0019015:176513-176532 None:intergenic 25.0%
! TATCCTCTTGATATAAAACA+TGG + tig0019015:176690-176709 None:intergenic 25.0%
!! ATGTTTTATATCAAGAGGAT+AGG - tig0019015:176689-176708 Msa1370070:intron 25.0%
!! TGTTTTATATCAAGAGGATA+GGG - tig0019015:176690-176709 Msa1370070:intron 25.0%
! GATTAGAACAATTTGCATTA+TGG - tig0019015:176713-176732 Msa1370070:intron 25.0%
! TGACATGTAAATTCATATAG+AGG + tig0019015:176755-176774 None:intergenic 25.0%
! ATCTCCTAAAGATTTAAACA+GGG + tig0019015:177118-177137 None:intergenic 25.0%
! AATCTCCTAAAGATTTAAAC+AGG + tig0019015:177119-177138 None:intergenic 25.0%
! TAGTATACATGGAAAGAAAA+CGG + tig0019015:177154-177173 None:intergenic 25.0%
! ATTGTTAGGTTTATTGAACT+AGG - tig0019015:177716-177735 Msa1370070:intron 25.0%
! GTGAAGTCTCAATTTATATT+CGG - tig0019015:177887-177906 Msa1370070:intron 25.0%
! TGAAGTCTCAATTTATATTC+GGG - tig0019015:177888-177907 Msa1370070:intron 25.0%
! TTTCTTTGTAAATTTGCATG+TGG - tig0019015:177915-177934 Msa1370070:intron 25.0%
!! TGAGTTTTTCATTCAACAAT+AGG + tig0019015:178007-178026 None:intergenic 25.0%
! TTGTTAGTATGTATTCTAAC+TGG - tig0019015:178397-178416 Msa1370070:CDS 25.0%
! ATTCATAAGCCAAATACAAA+CGG + tig0019015:178435-178454 None:intergenic 25.0%
! GAATACTTCTGAATTTATTC+TGG - tig0019015:178451-178470 Msa1370070:five_prime_UTR 25.0%
! TTTAAGTATTTCATTCAGGT+AGG + tig0019015:178819-178838 None:intergenic 25.0%
!! AAGTAAAGGCACTATAAAGT+TGG - tig0019015:174630-174649 Msa1370070:three_prime_UTR 30.0%
!! AGTAAAGGCACTATAAAGTT+GGG - tig0019015:174631-174650 Msa1370070:three_prime_UTR 30.0%
!! GGGTTGGTAAGTTTATAAAA+GGG - tig0019015:174654-174673 Msa1370070:three_prime_UTR 30.0%
GAGAATAGAAAGAATGAGAT+TGG + tig0019015:174765-174784 None:intergenic 30.0%
AGAAAAGAAAAGAAAAGGGT+GGG + tig0019015:174809-174828 None:intergenic 30.0%
AAGAAAAGAAAAGAAAAGGG+TGG + tig0019015:174810-174829 None:intergenic 30.0%
!! TTGATTTTGAGAATGAGGTT+CGG + tig0019015:174988-175007 None:intergenic 30.0%
ACGAATTGGATTAACGATTA+CGG - tig0019015:175081-175100 Msa1370070:three_prime_UTR 30.0%
AAACCCTAATTATGAAAAGG+GGG + tig0019015:175225-175244 None:intergenic 30.0%
GATTATAGTACACTAGTATC+TGG + tig0019015:175481-175500 None:intergenic 30.0%
!!! CTAAGTTCTCTACTAGTTTT+AGG - tig0019015:175512-175531 Msa1370070:intron 30.0%
TGATGCTTAGAATCTTTGAT+CGG - tig0019015:175818-175837 Msa1370070:intron 30.0%
TATAGATCATCTGATCCATT+GGG + tig0019015:175952-175971 None:intergenic 30.0%
ATATAGATCATCTGATCCAT+TGG + tig0019015:175953-175972 None:intergenic 30.0%
CAATTCTATCTAGTGAGATA+GGG - tig0019015:175978-175997 Msa1370070:intron 30.0%
AATTCTATCTAGTGAGATAG+GGG - tig0019015:175979-175998 Msa1370070:intron 30.0%
! TCCAAAAATGCAATTTTCCA+TGG - tig0019015:176017-176036 Msa1370070:intron 30.0%
! TCCATGGAAAATTGCATTTT+TGG + tig0019015:176021-176040 None:intergenic 30.0%
! AAAAATGCAATTTTCCATGG+AGG - tig0019015:176020-176039 Msa1370070:intron 30.0%
!!! GTTCCTTGACAATGTTTTTT+AGG - tig0019015:176115-176134 Msa1370070:intron 30.0%
AAAACAATGGAGAGAGAAAA+AGG - tig0019015:176258-176277 Msa1370070:intron 30.0%
!!! AACCACTTTTTGACAACTTT+TGG + tig0019015:176330-176349 None:intergenic 30.0%
TTGCACAAACAAAACAAACT+AGG + tig0019015:176454-176473 None:intergenic 30.0%
!!! AGTTTGTTTTGTTTGTGCAA+TGG - tig0019015:176454-176473 Msa1370070:intron 30.0%
CACTACACTACTAAAAAATC+TGG + tig0019015:176514-176533 None:intergenic 30.0%
!!! CAGATTTTTTAGTAGTGTAG+TGG - tig0019015:176512-176531 Msa1370070:intron 30.0%
! GTTTTATATCAAGAGGATAG+GGG - tig0019015:176691-176710 Msa1370070:intron 30.0%
TACTCCCTGTTTAAATCTTT+AGG - tig0019015:177111-177130 Msa1370070:intron 30.0%
ACTCCAGAAATCATATCATA+GGG - tig0019015:177508-177527 Msa1370070:intron 30.0%
TCTTGTTAATTTCTTGTTGC+AGG - tig0019015:177548-177567 Msa1370070:intron 30.0%
CTTGTTAATTTCTTGTTGCA+GGG - tig0019015:177549-177568 Msa1370070:intron 30.0%
ACTCCTGGATAACTAATAAA+GGG + tig0019015:178229-178248 None:intergenic 30.0%
AACTCCTGGATAACTAATAA+AGG + tig0019015:178230-178249 None:intergenic 30.0%
GATACAATCTTGAGCTAAAA+TGG + tig0019015:178355-178374 None:intergenic 30.0%
TACATACTAACAAAGCAAGA+AGG + tig0019015:178390-178409 None:intergenic 30.0%
AACAATCAAGGAATGAAAAG+TGG - tig0019015:178596-178615 Msa1370070:five_prime_UTR 30.0%
!!! GGGTGTTTTTGTTTTAAACT+TGG - tig0019015:178621-178640 Msa1370070:five_prime_UTR 30.0%
CATATGGTATGTTGTTGATA+TGG - tig0019015:178716-178735 Msa1370070:five_prime_UTR 30.0%
!! GTAAAGGCACTATAAAGTTG+GGG - tig0019015:174632-174651 Msa1370070:three_prime_UTR 35.0%
!! TAAAGGCACTATAAAGTTGG+GGG - tig0019015:174633-174652 Msa1370070:three_prime_UTR 35.0%
!! GGGGTTGGTAAGTTTATAAA+AGG - tig0019015:174653-174672 Msa1370070:three_prime_UTR 35.0%
AAAAGAAAAGAAAAGGGTGG+GGG + tig0019015:174807-174826 None:intergenic 35.0%
GAAAAGAAAAGAAAAGGGTG+GGG + tig0019015:174808-174827 None:intergenic 35.0%
GAATTGGGAATTGAGAAGAA+AGG + tig0019015:174953-174972 None:intergenic 35.0%
! TAATCCAATTCGTGTTTTCC+CGG + tig0019015:175074-175093 None:intergenic 35.0%
AACCCTAATTATGAAAAGGG+GGG + tig0019015:175224-175243 None:intergenic 35.0%
CTAGTAGAGAACTTAGTGTT+AGG + tig0019015:175508-175527 None:intergenic 35.0%
!!! TAGTTTTAGGTCCATTTGCA+TGG - tig0019015:175525-175544 Msa1370070:intron 35.0%
AACAAGAAAGAATGTTGAGG+TGG - tig0019015:175680-175699 Msa1370070:CDS 35.0%
AGAATCTTTGATCGGAAAAG+CGG - tig0019015:175826-175845 Msa1370070:intron 35.0%
GATATTTGAATTCAGGGTAG+AGG - tig0019015:175860-175879 Msa1370070:CDS 35.0%
CTAAAACTTGGTTTCTGCTA+GGG - tig0019015:175926-175945 Msa1370070:intron 35.0%
CCTATCTCACTAGATAGAAT+TGG + tig0019015:175980-175999 None:intergenic 35.0%
CCAATTCTATCTAGTGAGAT+AGG - tig0019015:175977-175996 Msa1370070:intron 35.0%
!!! CCTTGACAATGTTTTTTAGG+CGG - tig0019015:176118-176137 Msa1370070:intron 35.0%
!!! CTTGACAATGTTTTTTAGGC+GGG - tig0019015:176119-176138 Msa1370070:intron 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG - tig0019015:176325-176344 Msa1370070:intron 35.0%
TGGAGTAGAAAATGAATTGC+TGG - tig0019015:176474-176493 Msa1370070:intron 35.0%
TAGTAGTGTAGTGGTTTGAA+TGG - tig0019015:176521-176540 Msa1370070:intron 35.0%
TACCCATGTTATGAGGAATT+GGG + tig0019015:176637-176656 None:intergenic 35.0%
ACAAATGTACCCATGTTATG+AGG + tig0019015:176644-176663 None:intergenic 35.0%
TCATAACATGGGTACATTTG+TGG - tig0019015:176643-176662 Msa1370070:intron 35.0%
! GCACCATGTTTTATATCAAG+AGG - tig0019015:176684-176703 Msa1370070:intron 35.0%
! GTTTAGTTCAATGAAAGGGA+AGG + tig0019015:176919-176938 None:intergenic 35.0%
GATTGGAGACTGAGATTAAA+AGG - tig0019015:177181-177200 Msa1370070:intron 35.0%
ACTAGACATCTGTTAGTTGA+AGG + tig0019015:177270-177289 None:intergenic 35.0%
AATCAAGATGACAAGTCCTA+AGG - tig0019015:177344-177363 Msa1370070:intron 35.0%
! GTTGGCCTAAAAAAACTACA+AGG + tig0019015:177411-177430 None:intergenic 35.0%
!!! GTTTTTTTAGGCCAACTTTC+CGG - tig0019015:177415-177434 Msa1370070:intron 35.0%
AGTAGTCAATGCTACAAGAT+GGG + tig0019015:177452-177471 None:intergenic 35.0%
TATTCAAACCCCAAAATGAC+TGG - tig0019015:177481-177500 Msa1370070:intron 35.0%
CACTCCAGAAATCATATCAT+AGG - tig0019015:177507-177526 Msa1370070:intron 35.0%
CTCCAGAAATCATATCATAG+GGG - tig0019015:177509-177528 Msa1370070:intron 35.0%
TCCAGAAATCATATCATAGG+GGG - tig0019015:177510-177529 Msa1370070:intron 35.0%
ATATGGACACAAAAGCAACA+AGG + tig0019015:177665-177684 None:intergenic 35.0%
! GTTGGCATCTTTCAACTTTT+GGG + tig0019015:177834-177853 None:intergenic 35.0%
! AGTTGGCATCTTTCAACTTT+TGG + tig0019015:177835-177854 None:intergenic 35.0%
AAAGTTGAAAGATGCCAACT+CGG - tig0019015:177835-177854 Msa1370070:intron 35.0%
GTACCCTTTATTAGTTATCC+AGG - tig0019015:178223-178242 Msa1370070:intron 35.0%
! CTAACAAAGCAAGAAGGTAT+TGG + tig0019015:178384-178403 None:intergenic 35.0%
!! GTTTCGTATCAGTTTTAGTG+AGG - tig0019015:178497-178516 Msa1370070:five_prime_UTR 35.0%
!!! CTTGTTTTTGGCTTGCAAAA+CGG - tig0019015:178556-178575 Msa1370070:five_prime_UTR 35.0%
!!! TTGTTTTTGGCTTGCAAAAC+GGG - tig0019015:178557-178576 Msa1370070:five_prime_UTR 35.0%
ATCAAGGAATGAAAAGTGGA+AGG - tig0019015:178600-178619 Msa1370070:five_prime_UTR 35.0%
TCAAGGAATGAAAAGTGGAA+GGG - tig0019015:178601-178620 Msa1370070:five_prime_UTR 35.0%
TCTCGGTACATATCTGAATT+CGG + tig0019015:178679-178698 None:intergenic 35.0%
!! AAAGGCACTATAAAGTTGGG+GGG - tig0019015:174634-174653 Msa1370070:three_prime_UTR 40.0%
AGGGTAAGTAAGTCCAAACA+AGG - tig0019015:174673-174692 Msa1370070:three_prime_UTR 40.0%
CCACAAATCAACTGTTTCAG+TGG + tig0019015:174699-174718 None:intergenic 40.0%
!! CCACTGAAACAGTTGATTTG+TGG - tig0019015:174696-174715 Msa1370070:three_prime_UTR 40.0%
AGCGAAGAAGGTGAAAAAGA+GGG + tig0019015:174930-174949 None:intergenic 40.0%
! AATCCAATTCGTGTTTTCCC+GGG + tig0019015:175073-175092 None:intergenic 40.0%
ACATTGGAAGCAAGGTTGAA+GGG + tig0019015:175183-175202 None:intergenic 40.0%
AATGAGTACAGACCTGACAT+TGG + tig0019015:175199-175218 None:intergenic 40.0%
! TTCCCCCCCTTTTCATAATT+AGG - tig0019015:175218-175237 Msa1370070:CDS 40.0%
! TCCCCCCCTTTTCATAATTA+GGG - tig0019015:175219-175238 Msa1370070:CDS 40.0%
ACCCTAATTATGAAAAGGGG+GGG + tig0019015:175223-175242 None:intergenic 40.0%
! ATAGTCCTCGATTTGTCTCA+TGG - tig0019015:175561-175580 Msa1370070:intron 40.0%
GCGAACAAGAAAGAATGTTG+AGG - tig0019015:175677-175696 Msa1370070:CDS 40.0%
AGAAAGAATGTTGAGGTGGA+TGG - tig0019015:175684-175703 Msa1370070:CDS 40.0%
GAAAGAATGTTGAGGTGGAT+GGG - tig0019015:175685-175704 Msa1370070:CDS 40.0%
TTGAATTCAGGGTAGAGGAA+AGG - tig0019015:175865-175884 Msa1370070:CDS 40.0%
! CCTAGCAGAAACCAAGTTTT+AGG + tig0019015:175928-175947 None:intergenic 40.0%
CCTAAAACTTGGTTTCTGCT+AGG - tig0019015:175925-175944 Msa1370070:intron 40.0%
TGTTGACATGTGAATGGGAA+AGG - tig0019015:176056-176075 Msa1370070:intron 40.0%
CCGCCTAAAAAACATTGTCA+AGG + tig0019015:176121-176140 None:intergenic 40.0%
GTTGAGTATGGGAAACTTAG+TGG - tig0019015:176143-176162 Msa1370070:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG - tig0019015:176268-176287 Msa1370070:intron 40.0%
TAGTGTAGTGGTTTGAATGG+AGG - tig0019015:176524-176543 Msa1370070:intron 40.0%
TTCCCCAATTCCTCATAACA+TGG - tig0019015:176631-176650 Msa1370070:CDS 40.0%
TCCCCAATTCCTCATAACAT+GGG - tig0019015:176632-176651 Msa1370070:CDS 40.0%
ACCCATGTTATGAGGAATTG+GGG + tig0019015:176636-176655 None:intergenic 40.0%
GTACCCATGTTATGAGGAAT+TGG + tig0019015:176638-176657 None:intergenic 40.0%
AACATGGGTACATTTGTGGT+TGG - tig0019015:176647-176666 Msa1370070:intron 40.0%
! CTGAAATTGATGGCTCGTTA+GGG - tig0019015:176835-176854 Msa1370070:intron 40.0%
! TGAAATTGATGGCTCGTTAG+GGG - tig0019015:176836-176855 Msa1370070:intron 40.0%
! AAGAGTCTGGTTCAAAGAAG+AGG - tig0019015:176874-176893 Msa1370070:intron 40.0%
TAGTTCAATGAAAGGGAAGG+AGG + tig0019015:176916-176935 None:intergenic 40.0%
!!! CACACGCTGATTCCTTTTTT+AGG + tig0019015:176983-177002 None:intergenic 40.0%
GATTTAAACAGGGAGTAGCT+AGG + tig0019015:177108-177127 None:intergenic 40.0%
CTGAGATTAAAAGGCAGTGT+TGG - tig0019015:177190-177209 Msa1370070:intron 40.0%
GATAACATATGCAACGCCTT+AGG + tig0019015:177363-177382 None:intergenic 40.0%
GAAAGATAATGCCGGAAAGT+TGG + tig0019015:177429-177448 None:intergenic 40.0%
AAGATGGGGAAAGATAATGC+CGG + tig0019015:177437-177456 None:intergenic 40.0%
GTAGTCAATGCTACAAGATG+GGG + tig0019015:177451-177470 None:intergenic 40.0%
CAGTAGTCAATGCTACAAGA+TGG + tig0019015:177453-177472 None:intergenic 40.0%
!! GAGTGAATCCAGTCATTTTG+GGG + tig0019015:177492-177511 None:intergenic 40.0%
!! GGAGTGAATCCAGTCATTTT+GGG + tig0019015:177493-177512 None:intergenic 40.0%
! TGGAGTGAATCCAGTCATTT+TGG + tig0019015:177494-177513 None:intergenic 40.0%
TCCCCCTATGATATGATTTC+TGG + tig0019015:177514-177533 None:intergenic 40.0%
TTTGTGTCCATATGTAGCTC+TGG - tig0019015:177672-177691 Msa1370070:intron 40.0%
TATTGAACTAGGCTCCATCT+TGG - tig0019015:177727-177746 Msa1370070:intron 40.0%
AAGTTGAAAGATGCCAACTC+GGG - tig0019015:177836-177855 Msa1370070:intron 40.0%
!! AGCAAGAAGGTATTGGTGAT+AGG + tig0019015:178377-178396 None:intergenic 40.0%
AAATACAAACGGAAGCCACT+GGG + tig0019015:178424-178443 None:intergenic 40.0%
AGGCAAACGATAATCTAGTG+AGG - tig0019015:178517-178536 Msa1370070:five_prime_UTR 40.0%
!!! TGTTTTTGGCTTGCAAAACG+GGG - tig0019015:178558-178577 Msa1370070:five_prime_UTR 40.0%
TACTTCAACACCACACATCT+CGG + tig0019015:178696-178715 None:intergenic 40.0%
! GTGTGGTGTTGAAGTACATA+TGG - tig0019015:178700-178719 Msa1370070:five_prime_UTR 40.0%
!! ACTGTTTCAGTGGCCTTGTT+TGG + tig0019015:174689-174708 None:intergenic 45.0%
GCGAAGAAGGTGAAAAAGAG+GGG + tig0019015:174929-174948 None:intergenic 45.0%
GAGCGAAGAAGGTGAAAAAG+AGG + tig0019015:174931-174950 None:intergenic 45.0%
TGAGAAGAAAGGAGCGAAGA+AGG + tig0019015:174942-174961 None:intergenic 45.0%
CGGTTGCACGAATGAGAATT+GGG + tig0019015:174968-174987 None:intergenic 45.0%
TCGGTTGCACGAATGAGAAT+TGG + tig0019015:174969-174988 None:intergenic 45.0%
AAGGTAGCTAGGGTACGAAA+TGG - tig0019015:175044-175063 Msa1370070:three_prime_UTR 45.0%
TAGGGTACGAAATGGTTTCC+CGG - tig0019015:175052-175071 Msa1370070:three_prime_UTR 45.0%
TTTCCCGGGAAAACACGAAT+TGG - tig0019015:175067-175086 Msa1370070:three_prime_UTR 45.0%
AGGAAGAGCGAAGGTTGAAT+CGG + tig0019015:175130-175149 None:intergenic 45.0%
ATTGGAAGCAAGGTTGAAGG+GGG + tig0019015:175181-175200 None:intergenic 45.0%
CATTGGAAGCAAGGTTGAAG+GGG + tig0019015:175182-175201 None:intergenic 45.0%
GACATTGGAAGCAAGGTTGA+AGG + tig0019015:175184-175203 None:intergenic 45.0%
TCAACCTTGCTTCCAATGTC+AGG - tig0019015:175184-175203 Msa1370070:CDS 45.0%
CTCGTGCTAGATGGATGAAA+TGG - tig0019015:175585-175604 Msa1370070:intron 45.0%
! TTCAATGGAAGTTGGTCTGC+AGG - tig0019015:175739-175758 Msa1370070:CDS 45.0%
CGGAAAAGCGGATCAAATAG+AGG - tig0019015:175838-175857 Msa1370070:intron 45.0%
! TGCAATTTTCCATGGAGGCA+TGG - tig0019015:176025-176044 Msa1370070:intron 45.0%
!! GCAATTTTCCATGGAGGCAT+GGG - tig0019015:176026-176045 Msa1370070:intron 45.0%
!! TGCTGGTGTTGACATGTGAA+TGG - tig0019015:176050-176069 Msa1370070:intron 45.0%
!! GCTGGTGTTGACATGTGAAT+GGG - tig0019015:176051-176070 Msa1370070:intron 45.0%
! TTTTAGGCGGGAGTTGAGTA+TGG - tig0019015:176131-176150 Msa1370070:intron 45.0%
TTTAGGCGGGAGTTGAGTAT+GGG - tig0019015:176132-176151 Msa1370070:intron 45.0%
! GCTGCTAGTGCTGAAATTGA+TGG - tig0019015:176825-176844 Msa1370070:intron 45.0%
! GCTGAAATTGATGGCTCGTT+AGG - tig0019015:176834-176853 Msa1370070:intron 45.0%
TCTGACAGTCTCAAAGAGTC+TGG - tig0019015:176861-176880 Msa1370070:intron 45.0%
TCCTATTTGTATCGCTGGCA+AGG + tig0019015:177237-177256 None:intergenic 45.0%
AGTGCTCCTATTTGTATCGC+TGG + tig0019015:177242-177261 None:intergenic 45.0%
CTACTAGCTCCAAAGCATGT+CGG - tig0019015:177593-177612 Msa1370070:intron 45.0%
TACTAGCTCCAAAGCATGTC+GGG - tig0019015:177594-177613 Msa1370070:intron 45.0%
GTACACACCAGAGCTACATA+TGG + tig0019015:177682-177701 None:intergenic 45.0%
TCCGAATGGTGACACAGTTA+AGG - tig0019015:177801-177820 Msa1370070:intron 45.0%
CCCTTAACTGTGTCACCATT+CGG + tig0019015:177805-177824 None:intergenic 45.0%
CCGAATGGTGACACAGTTAA+GGG - tig0019015:177802-177821 Msa1370070:intron 45.0%
CGAATGGTGACACAGTTAAG+GGG - tig0019015:177803-177822 Msa1370070:intron 45.0%
! CTTTTCTTGAAGACCCGAGT+TGG + tig0019015:177852-177871 None:intergenic 45.0%
AACTTCGTGACGAGAAACAG+AGG - tig0019015:178071-178090 Msa1370070:intron 45.0%
CAAGGCAGAGAAAGAGAAGT+TGG - tig0019015:178096-178115 Msa1370070:intron 45.0%
!! GGGTACCAATTTGTTGCCAT+GGG + tig0019015:178209-178228 None:intergenic 45.0%
!! AGGGTACCAATTTGTTGCCA+TGG + tig0019015:178210-178229 None:intergenic 45.0%
GTTATCCAGGAGTTGCAATG+TGG - tig0019015:178236-178255 Msa1370070:intron 45.0%
AATTGCCACATTGCAACTCC+TGG + tig0019015:178244-178263 None:intergenic 45.0%
ACGAAGTACATGATCCTGTG+AGG + tig0019015:178290-178309 None:intergenic 45.0%
!! CTGGCTCTGTGCAATTCTTT+GGG - tig0019015:178326-178345 Msa1370070:CDS 45.0%
TGTATTCTAACTGGACCCAG+TGG - tig0019015:178406-178425 Msa1370070:CDS 45.0%
CAAATACAAACGGAAGCCAC+TGG + tig0019015:178425-178444 None:intergenic 45.0%
CAGTGGCTTCCGTTTGTATT+TGG - tig0019015:178423-178442 Msa1370070:exon 45.0%
! TTCGGTTCGTGTGAGTACAA+GGG + tig0019015:178661-178680 None:intergenic 45.0%
! ATTCGGTTCGTGTGAGTACA+AGG + tig0019015:178662-178681 None:intergenic 45.0%
CAGATATGTACCGAGATGTG+TGG - tig0019015:178683-178702 Msa1370070:five_prime_UTR 45.0%
GATATTAAACCTCCACGCTC+TGG - tig0019015:178749-178768 Msa1370070:five_prime_UTR 45.0%
!! TAATTAATTAATGTATAAAA+TGG + tig0019015:174842-174861 None:intergenic 5.0%
GCACTATAAAGTTGGGGGGT+TGG - tig0019015:174638-174657 Msa1370070:three_prime_UTR 50.0%
GGGGGAATCTGTGTTTGTGT+GGG + tig0019015:174789-174808 None:intergenic 50.0%
TGGGGGAATCTGTGTTTGTG+TGG + tig0019015:174790-174809 None:intergenic 50.0%
AGGGTACGAAATGGTTTCCC+GGG - tig0019015:175053-175072 Msa1370070:three_prime_UTR 50.0%
AGCGAAGGTTGAATCGGGAA+CGG + tig0019015:175124-175143 None:intergenic 50.0%
GGAAGAGCGAAGGTTGAATC+GGG + tig0019015:175129-175148 None:intergenic 50.0%
TTGGAAGCAAGGTTGAAGGG+GGG + tig0019015:175180-175199 None:intergenic 50.0%
CAGACCTGACATTGGAAGCA+AGG + tig0019015:175191-175210 None:intergenic 50.0%
CGAGTCCATGAGACAAATCG+AGG + tig0019015:175569-175588 None:intergenic 50.0%
TCTCATGGACTCGTGCTAGA+TGG - tig0019015:175576-175595 Msa1370070:intron 50.0%
AGAATGTTGAGGTGGATGGG+TGG - tig0019015:175688-175707 Msa1370070:CDS 50.0%
ATTGGGGAACATGCTACAGC+TGG + tig0019015:176620-176639 None:intergenic 50.0%
GCCTTGCCAGCGATACAAAT+AGG - tig0019015:177233-177252 Msa1370070:intron 50.0%
CAACTTCTCCCGACATGCTT+TGG + tig0019015:177605-177624 None:intergenic 50.0%
! AATCAGGATGGCAGCCTTGT+CGG + tig0019015:177774-177793 None:intergenic 50.0%
TCGGACAGCATCAATCAGGA+TGG + tig0019015:177786-177805 None:intergenic 50.0%
CCATTCGGACAGCATCAATC+AGG + tig0019015:177790-177809 None:intergenic 50.0%
CCTGATTGATGCTGTCCGAA+TGG - tig0019015:177787-177806 Msa1370070:intron 50.0%
TGACGAGAAACAGAGGCTCA+AGG - tig0019015:178078-178097 Msa1370070:intron 50.0%
!! CCAATTTGTTGCCATGGGCT+TGG + tig0019015:178204-178223 None:intergenic 50.0%
CCAAGCCCATGGCAACAAAT+TGG - tig0019015:178201-178220 Msa1370070:intron 50.0%
ATTTATGCCACCTGCTGCAG+TGG - tig0019015:178261-178280 Msa1370070:intron 50.0%
GAATTGCACAGAGCCAGCTT+AGG + tig0019015:178323-178342 None:intergenic 50.0%
!! GCTGGCTCTGTGCAATTCTT+TGG - tig0019015:178325-178344 Msa1370070:CDS 50.0%
GTGCTTGGGTCACTATTGTG+AGG - tig0019015:178787-178806 Msa1370070:five_prime_UTR 50.0%
TTGGATCGGATGTTGCACCA+AGG - tig0019015:178847-178866 Msa1370070:five_prime_UTR 50.0%
TGGATCGGATGTTGCACCAA+GGG - tig0019015:178848-178867 Msa1370070:five_prime_UTR 50.0%
TCGTACCCTAGCTACCTTCC+CGG + tig0019015:175042-175061 None:intergenic 55.0%
GCGAAGGTTGAATCGGGAAC+GGG + tig0019015:175123-175142 None:intergenic 55.0%
TTCCTTCCTCTGCCTTCACC+TGG - tig0019015:175145-175164 Msa1370070:three_prime_UTR 55.0%
TGGTTTCTGCTAGGGCCCAA+TGG - tig0019015:175934-175953 Msa1370070:intron 55.0%
AAGGCCTGCCAAAACCGACA+AGG - tig0019015:177757-177776 Msa1370070:intron 55.0%
!!! GATGGCAGCCTTGTCGGTTT+TGG + tig0019015:177768-177787 None:intergenic 55.0%
GCGGTAGGCAAGAAACTAGG+TGG + tig0019015:178148-178167 None:intergenic 55.0%
GTGGCGGTAGGCAAGAAACT+AGG + tig0019015:178151-178170 None:intergenic 55.0%
CTTGTGCAGCAAATGCCGCA+GGG + tig0019015:178180-178199 None:intergenic 55.0%
! TGTGAGGTATCCACTGCAGC+AGG + tig0019015:178274-178293 None:intergenic 55.0%
TGCTGCAGTGGATACCTCAC+AGG - tig0019015:178273-178292 Msa1370070:intron 55.0%
ACAGAGCCAGCTTAGGCAAC+TGG + tig0019015:178316-178335 None:intergenic 55.0%
ACCACAGTGCTCATGGTGCT+TGG - tig0019015:178772-178791 Msa1370070:five_prime_UTR 55.0%
CCACAGTGCTCATGGTGCTT+GGG - tig0019015:178773-178792 Msa1370070:five_prime_UTR 55.0%
GGCAGAGGAAGGAAGAGCGA+AGG + tig0019015:175139-175158 None:intergenic 60.0%
AGGTTGAAGGGGGGCTGAGT+GGG + tig0019015:175171-175190 None:intergenic 60.0%
AAGGTTGAAGGGGGGCTGAG+TGG + tig0019015:175172-175191 None:intergenic 60.0%
CTAGGCTCCATCTTGGAGCC+TGG - tig0019015:177734-177753 Msa1370070:intron 60.0%
GCTCCATCTTGGAGCCTGGA+AGG - tig0019015:177738-177757 Msa1370070:intron 60.0%
AGGCCTTCCAGGCTCCAAGA+TGG + tig0019015:177744-177763 None:intergenic 60.0%
!! TCGGTTTTGGCAGGCCTTCC+AGG + tig0019015:177755-177774 None:intergenic 60.0%
!!! GCAGCCTTGTCGGTTTTGGC+AGG + tig0019015:177764-177783 None:intergenic 60.0%
AGCAAATGCCGCAGGGAGTG+CGG + tig0019015:178173-178192 None:intergenic 60.0%
CCTTGTGCAGCAAATGCCGC+AGG + tig0019015:178181-178200 None:intergenic 60.0%
! CCTGCGGCATTTGCTGCACA+AGG - tig0019015:178178-178197 Msa1370070:intron 60.0%
! GAGGTATCCACTGCAGCAGG+TGG + tig0019015:178271-178290 None:intergenic 60.0%
CGTCCTCCAGTTGCCTAAGC+TGG - tig0019015:178307-178326 Msa1370070:CDS 60.0%
GAGCCAGCTTAGGCAACTGG+AGG + tig0019015:178313-178332 None:intergenic 60.0%
! GCTCTGGACCACAGTGCTCA+TGG - tig0019015:178765-178784 Msa1370070:five_prime_UTR 60.0%
! CCCAAGCACCATGAGCACTG+TGG + tig0019015:178776-178795 None:intergenic 60.0%
ACGCGCCGGGAAGGTAGCTA+GGG - tig0019015:175034-175053 Msa1370070:three_prime_UTR 65.0%
GGCCAGGTGAAGGCAGAGGA+AGG + tig0019015:175150-175169 None:intergenic 65.0%
AGTGGGCCAGGTGAAGGCAG+AGG + tig0019015:175154-175173 None:intergenic 65.0%
! TCCATGGAGGCATGGGCTGC+TGG - tig0019015:176033-176052 Msa1370070:intron 65.0%
ACCAGCAGCCCATGCCTCCA+TGG + tig0019015:176037-176056 None:intergenic 65.0%
! AAATGCCGCAGGGAGTGCGG+TGG + tig0019015:178170-178189 None:intergenic 65.0%
GCTGCACAAGGCCAAGCCCA+TGG - tig0019015:178190-178209 Msa1370070:intron 65.0%
CACTGTGGTCCAGAGCGTGG+AGG + tig0019015:178761-178780 None:intergenic 65.0%
! GAGCACTGTGGTCCAGAGCG+TGG + tig0019015:178764-178783 None:intergenic 65.0%
CGCGATTCGCTGTCACGCGC+CGG - tig0019015:175020-175039 Msa1370070:three_prime_UTR 70.0%
GCGATTCGCTGTCACGCGCC+GGG - tig0019015:175021-175040 Msa1370070:three_prime_UTR 70.0%
TTCGCTGTCACGCGCCGGGA+AGG - tig0019015:175025-175044 Msa1370070:three_prime_UTR 70.0%
CACGCGCCGGGAAGGTAGCT+AGG - tig0019015:175033-175052 Msa1370070:three_prime_UTR 70.0%
GGGCTGAGTGGGCCAGGTGA+AGG + tig0019015:175160-175179 None:intergenic 70.0%
TACCGCCACCGCACTCCCTG+CGG - tig0019015:178162-178181 Msa1370070:intron 70.0%
GAAGGGGGGCTGAGTGGGCC+AGG + tig0019015:175166-175185 None:intergenic 75.0%
! GCAGGGAGTGCGGTGGCGGT+AGG + tig0019015:178163-178182 None:intergenic 75.0%
! TGCCGCAGGGAGTGCGGTGG+CGG + tig0019015:178167-178186 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0019015 gene 174617 178874 174617 ID=Msa1370070;Name=Msa1370070
tig0019015 mRNA 174617 178874 174617 ID=Msa1370070-mRNA-1;Parent=Msa1370070;Name=Msa1370070-mRNA-1;_AED=0.24;_eAED=0.24;_QI=446|1|1|1|1|1|5|550|237
tig0019015 exon 174617 175433 174617 ID=Msa1370070-mRNA-1:exon:1521;Parent=Msa1370070-mRNA-1
tig0019015 exon 175605 175767 175605 ID=Msa1370070-mRNA-1:exon:1520;Parent=Msa1370070-mRNA-1
tig0019015 exon 175844 175921 175844 ID=Msa1370070-mRNA-1:exon:1519;Parent=Msa1370070-mRNA-1
tig0019015 exon 176596 176658 176596 ID=Msa1370070-mRNA-1:exon:1518;Parent=Msa1370070-mRNA-1
tig0019015 exon 178286 178874 178286 ID=Msa1370070-mRNA-1:exon:1517;Parent=Msa1370070-mRNA-1
tig0019015 five_prime_UTR 178429 178874 178429 ID=Msa1370070-mRNA-1:five_prime_utr;Parent=Msa1370070-mRNA-1
tig0019015 CDS 178286 178428 178286 ID=Msa1370070-mRNA-1:cds;Parent=Msa1370070-mRNA-1
tig0019015 CDS 176596 176658 176596 ID=Msa1370070-mRNA-1:cds;Parent=Msa1370070-mRNA-1
tig0019015 CDS 175844 175921 175844 ID=Msa1370070-mRNA-1:cds;Parent=Msa1370070-mRNA-1
tig0019015 CDS 175605 175767 175605 ID=Msa1370070-mRNA-1:cds;Parent=Msa1370070-mRNA-1
tig0019015 CDS 175167 175433 175167 ID=Msa1370070-mRNA-1:cds;Parent=Msa1370070-mRNA-1
tig0019015 three_prime_UTR 174617 175166 174617 ID=Msa1370070-mRNA-1:three_prime_utr;Parent=Msa1370070-mRNA-1
Gene Sequence

>Msa1370070

ATGGTTTCCCGGGAAAACACGAATTGGATTAACGATTACGGTTTCTATGATGATATTCCCGTTCCCGATTCAACCTTCGCTCTTCCTTCCTCTGCCTTCACCTGGCCCACTCAGCCCCCCTTCAACCTTGCTTCCAATGTCAGTGCTGAAATTGATGGCTCGTTAGGGGATTCTGACAGTCTCAAAGAGTCTGGTTCAAAGAAGAGGGTTAGATCTGAGTCATGTGCTGCTACTAGCTCCAAAGCATGTCGGGAGAAGTTGCGTAGAGATAGACTTAACGACAAGTTTATTGAACTAGGCTCCATCTTGGAGCCTGGAAGGCCTGCCAAAACCGACAAGGCTGCCATCCTGATTGATGCTGTCCGAATGGTGACACAGTTAAGGGGTGAAGCCCAAAAGTTGAAAGATGCCAACTCGGGTCTTCAAGAAAAGATTAAAGAGTTAAAGGTTGAGAAGAATGAACTTCGTGACGAGAAACAGAGGCTCAAGGCAGAGAAAGAGAAGTTGGAGCAGCAGCTGAAATCAATGAATGCACCACCTAGTTTCTTGCCTACCGCCACCGCACTCCCTGCGGCATTTGCTGCACAAGGCCAAGCCCATGGCAACAAATTGGTACCCTTTATTAGTTATCCAGGAGTTGCAATGTGGCAATTTATGCCACCTGCTGCAGTGGATACCTCACAGGATCATGTACTTCGTCCTCCAGTTGCCTAA
Protein sequence

>Msa1370070

MVSRENTNWINDYGFYDDIPVPDSTFALPSSAFTWPTQPPFNLASNVSAEIDGSLGDSDSLKESGSKKRVRSESCAATSSKACREKLRRDRLNDKFIELGSILEPGRPAKTDKAAILIDAVRMVTQLRGEAQKLKDANSGLQEKIKELKVEKNELRDEKQRLKAEKEKLEQQLKSMNAPPSFLPTATALPAAFAAQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA*