Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268590 | AWW91873.1 | 100.000 | 1075 | 0 | 0 | 1 | 1075 | 1 | 1075 | 0.0 | 2211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268590 | sp|Q9BBS9|RPOB_LOTJA | 93.458 | 1070 | 70 | 0 | 6 | 1075 | 1 | 1070 | 0.0 | 2076 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268590 | A0A2Z4KH34 | 100.000 | 1075 | 0 | 0 | 1 | 1075 | 1 | 1075 | 0.0 | 2211 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095160 | Msa0268590 | 0.800885 | 1.168081e-48 | -8.615850e-47 |
| Msa0095220 | Msa0268590 | 0.806513 | 7.930694e-50 | -8.615850e-47 |
| Msa0095280 | Msa0268590 | 0.802304 | 5.978377e-49 | -8.615850e-47 |
| Msa0139790 | Msa0268590 | 0.868508 | 6.196403e-66 | -8.615850e-47 |
| Msa0139800 | Msa0268590 | 0.831688 | 1.448184e-55 | -8.615850e-47 |
| Msa0139810 | Msa0268590 | 0.808752 | 2.654386e-50 | -8.615850e-47 |
| Msa0139830 | Msa0268590 | 0.868937 | 4.504441e-66 | -8.615850e-47 |
| Msa0173880 | Msa0268590 | 0.800048 | 1.729768e-48 | -8.615850e-47 |
| Msa0268170 | Msa0268590 | 0.805220 | 1.482960e-49 | -8.615850e-47 |
| Msa0268190 | Msa0268590 | 0.800445 | 1.436523e-48 | -8.615850e-47 |
| Msa0268200 | Msa0268590 | 0.808434 | 3.103299e-50 | -8.615850e-47 |
| Msa0268350 | Msa0268590 | 0.821851 | 3.241353e-53 | -8.615850e-47 |
| Msa0268360 | Msa0268590 | 0.810893 | 9.189982e-51 | -8.615850e-47 |
| Msa0268370 | Msa0268590 | 0.804079 | 2.565463e-49 | -8.615850e-47 |
| Msa0268430 | Msa0268590 | 0.816860 | 4.447156e-52 | -8.615850e-47 |
| Msa0268440 | Msa0268590 | 0.810061 | 1.390075e-50 | -8.615850e-47 |
| Msa0268450 | Msa0268590 | 0.805320 | 1.412940e-49 | -8.615850e-47 |
| Msa0268520 | Msa0268590 | 0.800603 | 1.333910e-48 | -8.615850e-47 |
| Msa0268570 | Msa0268590 | 0.816015 | 6.876921e-52 | -8.615850e-47 |
| Msa0268590 | Msa0268610 | 0.850699 | 1.433791e-60 | -8.615850e-47 |
| Msa0268590 | Msa0268670 | 0.820105 | 8.176456e-53 | -8.615850e-47 |
| Msa0268590 | Msa0268750 | 0.807486 | 4.938151e-50 | -8.615850e-47 |
| Msa0268590 | Msa0268780 | 0.807252 | 5.536063e-50 | -8.615850e-47 |
| Msa0268590 | Msa0268820 | 0.818208 | 2.209586e-52 | -8.615850e-47 |
| Msa0268590 | Msa0268860 | 0.816473 | 5.431813e-52 | -8.615850e-47 |
| Msa0268590 | Msa0268870 | 0.806202 | 9.225124e-50 | -8.615850e-47 |
| Msa0268590 | Msa0268880 | 0.821676 | 3.557174e-53 | -8.615850e-47 |
| Msa0268590 | Msa0268920 | 0.820094 | 8.223689e-53 | -8.615850e-47 |
| Msa0268590 | Msa0268990 | 0.826832 | 2.184515e-54 | -8.615850e-47 |
| Msa0268590 | Msa0269030 | 0.827316 | 1.673573e-54 | -8.615850e-47 |
| Msa0268590 | Msa0269070 | 0.813608 | 2.348912e-51 | -8.615850e-47 |
| Msa0268590 | Msa0269080 | 0.813704 | 2.237297e-51 | -8.615850e-47 |
| Msa0268590 | Msa0269090 | 0.812538 | 4.031484e-51 | -8.615850e-47 |
| Msa0268590 | Msa0344320 | 0.839754 | 1.311527e-57 | -8.615850e-47 |
| Msa0268590 | Msa0449920 | 0.800103 | 1.686368e-48 | -8.615850e-47 |
| Msa0268590 | Msa0484000 | 0.858542 | 7.672483e-63 | -8.615850e-47 |
| Msa0268590 | Msa0582500 | 0.880823 | 3.997116e-70 | -8.615850e-47 |
| Msa0268590 | Msa0582540 | 0.822115 | 2.814971e-53 | -8.615850e-47 |
| Msa0268590 | Msa0582610 | 0.820477 | 6.718332e-53 | -8.615850e-47 |
| Msa0268590 | Msa0582650 | 0.819902 | 9.100069e-53 | -8.615850e-47 |
| Msa0268590 | Msa0582670 | 0.904632 | 1.001675e-79 | -8.615850e-47 |
| Msa0268590 | Msa0582680 | 0.900114 | 1.012869e-77 | -8.615850e-47 |
| Msa0268590 | Msa0582770 | 0.814237 | 1.706670e-51 | -8.615850e-47 |
| Msa0268590 | Msa0582790 | 0.891406 | 4.089201e-74 | -8.615850e-47 |
| Msa0268590 | Msa0582800 | 0.884034 | 2.705385e-71 | -8.615850e-47 |
| Msa0268590 | Msa0582820 | 0.806849 | 6.736969e-50 | -8.615850e-47 |
| Msa0268590 | Msa0582880 | 0.802178 | 6.345747e-49 | -8.615850e-47 |
| Msa0268590 | Msa0582890 | 0.806226 | 9.118325e-50 | -8.615850e-47 |
| Msa0268590 | Msa0582920 | 0.811856 | 5.678751e-51 | -8.615850e-47 |
| Msa0268590 | Msa0924880 | 0.801896 | 7.252286e-49 | -8.615850e-47 |
| Msa0268590 | Msa0924990 | 0.809737 | 1.631912e-50 | -8.615850e-47 |
| Msa0268590 | Msa0931060 | 0.851996 | 6.166635e-61 | -8.615850e-47 |
| Msa0268590 | Msa0931080 | 0.809517 | 1.819933e-50 | -8.615850e-47 |
| Msa0268590 | Msa0931110 | 0.804449 | 2.149117e-49 | -8.615850e-47 |
| Msa0268590 | Msa0931120 | 0.887672 | 1.161298e-72 | -8.615850e-47 |
| Msa0268590 | Msa0931140 | 0.806620 | 7.530544e-50 | -8.615850e-47 |
| Msa0268590 | Msa0931160 | 0.801690 | 7.993078e-49 | -8.615850e-47 |
| Msa0268590 | Msa0931180 | 0.808117 | 3.625688e-50 | -8.615850e-47 |
| Msa0268590 | Msa0931190 | 0.806613 | 7.555169e-50 | -8.615850e-47 |
| Msa0268590 | Msa0931230 | 0.807124 | 5.891388e-50 | -8.615850e-47 |
| Msa0268590 | Msa0931250 | 0.868209 | 7.738566e-66 | -8.615850e-47 |
| Msa0268590 | Msa1086030 | 0.805577 | 1.248323e-49 | -8.615850e-47 |
| Msa0268590 | Msa1086040 | 0.817338 | 3.473351e-52 | -8.615850e-47 |
| Msa0268590 | Msa1086090 | 0.812912 | 3.339585e-51 | -8.615850e-47 |
| Msa0268590 | Msa1086110 | 0.905122 | 5.990493e-80 | -8.615850e-47 |
| Msa0268590 | Msa1086130 | 0.858193 | 9.747070e-63 | -8.615850e-47 |
| Msa0268590 | Msa1086200 | 0.813923 | 2.001503e-51 | -8.615850e-47 |
| Msa0268590 | Msa1086220 | 0.873522 | 1.377878e-67 | -8.615850e-47 |
| Msa0268590 | Msa1086240 | 0.859758 | 3.313229e-63 | -8.615850e-47 |
| Msa0268590 | Msa1086280 | 0.809231 | 2.095623e-50 | -8.615850e-47 |
| Msa0268590 | Msa1086310 | 0.800424 | 1.450748e-48 | -8.615850e-47 |
| Msa0268590 | Msa1086320 | 0.807091 | 5.987527e-50 | -8.615850e-47 |
| Msa0268590 | Msa1086430 | 0.806778 | 6.971672e-50 | -8.615850e-47 |
| Msa0268590 | Msa1086450 | 0.803836 | 2.881986e-49 | -8.615850e-47 |
| Msa0268590 | Msa1086470 | 0.815461 | 9.137328e-52 | -8.615850e-47 |
| Msa0268590 | Msa1086500 | 0.810368 | 1.193230e-50 | -8.615850e-47 |
| Msa0268590 | Msa1086510 | 0.800070 | 1.712078e-48 | -8.615850e-47 |
| Msa0268590 | Msa1086650 | 0.804159 | 2.469434e-49 | -8.615850e-47 |
| Msa0268590 | Msa1086670 | 0.811936 | 5.455768e-51 | -8.615850e-47 |
| Msa0268590 | Msa1086860 | 0.823156 | 1.611998e-53 | -8.615850e-47 |
| Msa0268590 | Msa1086880 | 0.804308 | 2.299434e-49 | -8.615850e-47 |
| Msa0268590 | Msa1086900 | 0.822489 | 2.304991e-53 | -8.615850e-47 |
| Msa0268590 | Msa1086930 | 0.845596 | 3.680345e-59 | -8.615850e-47 |
| Msa0268590 | Msa1143110 | 0.815565 | 8.662582e-52 | -8.615850e-47 |
| Msa0268590 | Msa1143170 | 0.800223 | 1.594057e-48 | -8.615850e-47 |
| Msa0268590 | Msa1143190 | 0.881275 | 2.747406e-70 | -8.615850e-47 |
| Msa0268590 | Msa1305100 | 0.860216 | 2.411236e-63 | -8.615850e-47 |
| Msa0268590 | Msa1305150 | 0.852054 | 5.937102e-61 | -8.615850e-47 |
| Msa0268590 | Msa1354940 | 0.886758 | 2.587185e-72 | -8.615850e-47 |
| Msa0268590 | Msa1355090 | 0.803474 | 3.426629e-49 | -8.615850e-47 |
| Msa0268590 | Msa1355110 | 0.848930 | 4.477869e-60 | -8.615850e-47 |
| Msa0268590 | Msa1355120 | 0.811495 | 6.802846e-51 | -8.615850e-47 |
| Msa0268590 | Msa1380610 | 0.810632 | 1.046795e-50 | -8.615850e-47 |
| Msa0268590 | Msa1380630 | 0.893090 | 8.686156e-75 | -8.615850e-47 |
| Msa0268590 | Msa1380670 | 0.837968 | 3.800528e-57 | -8.615850e-47 |
| Msa0268590 | Msa1380680 | 0.800845 | 1.190535e-48 | -8.615850e-47 |
| Msa0268590 | Msa1380690 | 0.813985 | 1.940156e-51 | -8.615850e-47 |
| Msa0268590 | Msa1380700 | 0.908063 | 2.573447e-81 | -8.615850e-47 |
| Msa0268590 | Msa1394070 | 0.802523 | 5.388070e-49 | -8.615850e-47 |
| Msa0268590 | Msa1394120 | 0.816327 | 5.853984e-52 | -8.615850e-47 |
| Msa0268590 | Msa1394130 | 0.803809 | 2.919222e-49 | -8.615850e-47 |
| Msa0268590 | Msa1394160 | 0.814788 | 1.288695e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268590 | MtrunA17_Chr4g0016641 | 99.349 | 1075 | 7 | 0 | 1 | 1075 | 1 | 1075 | 0.0 | 2194 |
| Msa0268590 | MtrunA17_CPg0493041 | 99.349 | 1075 | 7 | 0 | 1 | 1075 | 1 | 1075 | 0.0 | 2194 |
| Msa0268590 | MtrunA17_Chr4g0015531 | 78.804 | 368 | 4 | 3 | 301 | 668 | 1 | 294 | 0.0 | 562 |
| Msa0268590 | MtrunA17_Chr1g0159041 | 66.279 | 430 | 37 | 3 | 471 | 900 | 1 | 322 | 0.0 | 538 |
| Msa0268590 | MtrunA17_Chr4g0015541 | 87.619 | 210 | 2 | 1 | 866 | 1075 | 1 | 186 | 6.54e-118 | 365 |
| Msa0268590 | MtrunA17_Chr4g0015521 | 98.165 | 109 | 2 | 0 | 112 | 220 | 1 | 109 | 2.94e-66 | 218 |
| Msa0268590 | MtrunA17_Chr1g0159051 | 94.286 | 105 | 6 | 0 | 274 | 378 | 12 | 116 | 2.63e-62 | 207 |
| Msa0268590 | MtrunA17_Chr7g0247561 | 96.154 | 78 | 3 | 0 | 625 | 702 | 1 | 78 | 3.56e-47 | 162 |
| Msa0268590 | MtrunA17_Chr8g0345421 | 28.673 | 422 | 257 | 9 | 653 | 1056 | 728 | 1123 | 1.93e-36 | 149 |
| Msa0268590 | MtrunA17_Chr1g0155911 | 26.829 | 369 | 235 | 6 | 653 | 1016 | 782 | 1120 | 4.66e-35 | 145 |
| Msa0268590 | MtrunA17_Chr3g0136911 | 24.704 | 506 | 299 | 15 | 587 | 1058 | 724 | 1181 | 5.03e-28 | 122 |
| Msa0268590 | MtrunA17_Chr8g0375171 | 25.292 | 514 | 301 | 17 | 580 | 1058 | 714 | 1179 | 9.38e-28 | 121 |
| Msa0268590 | MtrunA17_Chr4g0069391 | 25.635 | 394 | 251 | 9 | 653 | 1041 | 786 | 1142 | 4.85e-27 | 119 |
| Msa0268590 | MtrunA17_Chr3g0142431 | 27.381 | 252 | 146 | 6 | 829 | 1058 | 2 | 238 | 8.04e-18 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268590 | ATCG00190.1 | 89.646 | 1072 | 109 | 1 | 6 | 1075 | 1 | 1072 | 0.0 | 1996 |
| Msa0268590 | AT4G21710.1 | 26.651 | 424 | 261 | 8 | 653 | 1056 | 779 | 1172 | 3.33e-37 | 152 |
| Msa0268590 | AT5G45140.2 | 27.553 | 421 | 262 | 8 | 653 | 1054 | 754 | 1150 | 1.39e-34 | 144 |
| Msa0268590 | AT5G45140.1 | 27.553 | 421 | 262 | 8 | 653 | 1054 | 754 | 1150 | 1.39e-34 | 144 |
| Msa0268590 | AT1G29940.1 | 27.200 | 375 | 220 | 12 | 657 | 1017 | 756 | 1091 | 1.52e-25 | 115 |
| Msa0268590 | AT3G23780.1 | 24.263 | 441 | 253 | 10 | 657 | 1059 | 769 | 1166 | 5.44e-25 | 113 |
| Msa0268590 | AT3G23780.2 | 24.263 | 441 | 253 | 10 | 657 | 1059 | 769 | 1166 | 5.44e-25 | 113 |
| Msa0268590 | AT3G18090.1 | 24.194 | 434 | 263 | 9 | 657 | 1059 | 651 | 1049 | 1.85e-24 | 111 |
| Msa0268590 | AT3G18090.2 | 24.444 | 225 | 137 | 3 | 657 | 876 | 651 | 847 | 5.35e-13 | 73.9 |
| Msa0268590 | AT3G18090.3 | 24.444 | 225 | 137 | 3 | 657 | 876 | 651 | 847 | 7.64e-13 | 73.6 |
Find 246 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGAGAAAATTGAGTTATT+TGG | 0.135693 | 2_2:-70319083 | Msa0268590:CDS |
| TGTCTAAATTTCGGAGTAAA+TGG | 0.137285 | 2_2:+70318108 | None:intergenic |
| CATTTGATTGGAATGAAATT+TGG | 0.153768 | 2_2:-70319376 | Msa0268590:CDS |
| CTTGTTTCGCCCTTCCTTTA+AGG | 0.204769 | 2_2:+70317331 | None:intergenic |
| ATATATCCGCGGGATTAATT+TGG | 0.209384 | 2_2:-70320008 | Msa0268590:CDS |
| GTTACACAACAACCCCTTAA+AGG | 0.212213 | 2_2:-70317345 | Msa0268590:CDS |
| TTTCAACAAAGATGTGAATT+AGG | 0.219138 | 2_2:-70319496 | Msa0268590:CDS |
| TGGATTCGATGTTTGTTTAC+TGG | 0.222331 | 2_2:+70317530 | None:intergenic |
| ATATATATATGAATCGTTTC+TGG | 0.228166 | 2_2:+70317849 | None:intergenic |
| CTGGGAACTTCTATAGTAAA+TGG | 0.231551 | 2_2:-70319922 | Msa0268590:CDS |
| ACATAAAGATTCAGGAAATA+TGG | 0.234879 | 2_2:+70319540 | None:intergenic |
| GTCAAAAGAAAATGCCATTT+TGG | 0.238441 | 2_2:-70319599 | Msa0268590:CDS |
| GAACGTTGATATCTAATTAA+TGG | 0.244746 | 2_2:+70318431 | None:intergenic |
| TTTGAACAGCCTGTTATAAT+AGG | 0.245428 | 2_2:-70317444 | Msa0268590:CDS |
| TGAATTAATTTCAAGATATA+AGG | 0.248171 | 2_2:+70317417 | None:intergenic |
| TTGATAGAAAAGCAAGGATA+TGG | 0.252693 | 2_2:-70319765 | Msa0268590:CDS |
| GGAATCAATGTAGGACTTAT+TGG | 0.263649 | 2_2:-70318965 | Msa0268590:CDS |
| ACGAGCTATACTTGGGATTC+AGG | 0.269809 | 2_2:-70317973 | Msa0268590:CDS |
| AGCACTGAATCGAGGTATTC+AGG | 0.270037 | 2_2:-70318795 | Msa0268590:CDS |
| GATCTATTACAAGATCAATT+TGG | 0.270369 | 2_2:-70319295 | Msa0268590:CDS |
| GATTCATAAGTGGTTGTTAA+TGG | 0.270524 | 2_2:+70319172 | None:intergenic |
| CGATCTAAAACTTGAGATAA+TGG | 0.281648 | 2_2:+70319133 | None:intergenic |
| GGTCTTCCATCTTGCAAATA+AGG | 0.291965 | 2_2:+70317732 | None:intergenic |
| TTGTTTCGCCCTTCCTTTAA+GGG | 0.292882 | 2_2:+70317332 | None:intergenic |
| ATAATTCGAGGAACTATATC+TGG | 0.305120 | 2_2:-70319247 | Msa0268590:CDS |
| GCATCATTATGCTCGATAAA+AGG | 0.305503 | 2_2:+70318656 | None:intergenic |
| ATTCGTGAGGGTACCCCTAA+TGG | 0.306675 | 2_2:+70317690 | None:intergenic |
| GGGAGAAAATTGAGTTATTT+GGG | 0.307341 | 2_2:-70319082 | Msa0268590:CDS |
| TCAAATATTCCGCTCTTTCC+CGG | 0.314064 | 2_2:+70317486 | None:intergenic |
| AATTCCGTACATAAAGATTC+AGG | 0.323867 | 2_2:+70319532 | None:intergenic |
| CGCCAAGTGGCCTTAGATTC+AGG | 0.326928 | 2_2:-70318545 | Msa0268590:CDS |
| TGTTGGCGGTGAACTCGCTT+TGG | 0.329325 | 2_2:-70318318 | Msa0268590:CDS |
| CGCATTTACCTTTATGAACC+TGG | 0.329782 | 2_2:+70318378 | None:intergenic |
| AACGATCTTTCCTGCGTGTT+CGG | 0.330632 | 2_2:+70318508 | None:intergenic |
| GGAATATTTGATGGAAGAAC+AGG | 0.334674 | 2_2:-70317474 | Msa0268590:CDS |
| AATGAATGTAGGACAGATAT+TGG | 0.340082 | 2_2:-70317670 | Msa0268590:CDS |
| AAACTTCCTTCCTTTGAATC+TGG | 0.340714 | 2_2:+70317061 | None:intergenic |
| TCTGGAGCATCCACAGGTTT+AGG | 0.340865 | 2_2:+70317162 | None:intergenic |
| TCACGCAAGGATTGGTCCTT+GGG | 0.341088 | 2_2:-70318930 | Msa0268590:CDS |
| ACGAGCAATCGAAAAGATTC+TGG | 0.342745 | 2_2:+70317144 | None:intergenic |
| ATATGGTCTTCAACCCATTA+GGG | 0.343228 | 2_2:-70317704 | Msa0268590:CDS |
| GTCAAGCAGTTCCTCTTTCT+CGG | 0.344262 | 2_2:-70318601 | Msa0268590:CDS |
| CTGGGATCTTGGGTAGAAAC+AGG | 0.344385 | 2_2:-70318068 | Msa0268590:CDS |
| TCAGTCTTCGGTTCATATTT+CGG | 0.349155 | 2_2:+70319461 | None:intergenic |
| AAATTGTATTTGATTTAATC+CGG | 0.349804 | 2_2:+70320212 | None:intergenic |
| CCATGAACTATTTGGGTCAA+TGG | 0.354074 | 2_2:+70319103 | None:intergenic |
| GTACTCGGAACTACGATTAT+TGG | 0.356639 | 2_2:-70317195 | Msa0268590:CDS |
| CGGTCCGAAAAGTGCATTGT+TGG | 0.359288 | 2_2:-70318581 | Msa0268590:CDS |
| AGCGGGAACTCCTGAATCTA+AGG | 0.364603 | 2_2:+70318535 | None:intergenic |
| CGTTCGAGAACTACGATCTT+TGG | 0.364953 | 2_2:-70317124 | Msa0268590:CDS |
| TATGCTCGATAAAAGGAATC+AGG | 0.367331 | 2_2:+70318663 | None:intergenic |
| TTGTCGATAAAACTCCAAAA+TGG | 0.374690 | 2_2:+70319585 | None:intergenic |
| TCCGCTCTTTCCCGGATACT+CGG | 0.379405 | 2_2:+70317494 | None:intergenic |
| TTGGGTCCTGGAGGATTGAC+GGG | 0.382208 | 2_2:-70319064 | Msa0268590:CDS |
| GAATGTTCACTCGGATTAGC+TGG | 0.386652 | 2_2:-70317648 | Msa0268590:CDS |
| TGGGGAAATTGAAAATGCTT+GGG | 0.386996 | 2_2:-70320263 | Msa0268590:CDS |
| ACAGCTGCGGATCATTTGAT+TGG | 0.389432 | 2_2:-70319388 | Msa0268590:CDS |
| GATATTTGAACCCGAGTATC+CGG | 0.389575 | 2_2:-70317505 | Msa0268590:CDS |
| AATTGAAAATGCTTGGGGTT+GGG | 0.394420 | 2_2:-70320257 | Msa0268590:CDS |
| GATATGGTCTTCAACCCATT+AGG | 0.395616 | 2_2:-70317705 | Msa0268590:CDS |
| GTTTGGGCGCTCGAGGGGTT+CGG | 0.396040 | 2_2:-70317282 | Msa0268590:CDS |
| GTTGGCGGTGAACTCGCTTT+GGG | 0.396452 | 2_2:-70318317 | Msa0268590:CDS |
| AGATGGAAGACCCGTTGATA+TGG | 0.398344 | 2_2:-70317721 | Msa0268590:CDS |
| ATTCCTTCCGAGGTGTCAAT+TGG | 0.403361 | 2_2:+70318983 | None:intergenic |
| AGATTATTACGAGCTATACT+TGG | 0.409704 | 2_2:-70317981 | Msa0268590:CDS |
| TGTAGGACTTATTGGATCCT+TGG | 0.411030 | 2_2:-70318957 | Msa0268590:CDS |
| TCTAACTATTGCATGGGAAC+AGG | 0.414074 | 2_2:-70318735 | Msa0268590:CDS |
| GAAAAGTGCATTGTTGGAAC+TGG | 0.419529 | 2_2:-70318575 | Msa0268590:CDS |
| TTCACGCAAGGATTGGTCCT+TGG | 0.420745 | 2_2:-70318931 | Msa0268590:CDS |
| CATTCCTCTAATGAATTCCC+TGG | 0.423604 | 2_2:-70319941 | Msa0268590:CDS |
| TTTGGGTCCTGGAGGATTGA+CGG | 0.423824 | 2_2:-70319065 | Msa0268590:CDS |
| ATGGGGAAATTGAAAATGCT+TGG | 0.425882 | 2_2:-70320264 | Msa0268590:CDS |
| GAATTGTGATTCTGGGATCT+TGG | 0.426630 | 2_2:-70318079 | Msa0268590:CDS |
| ATGGAGGTTTGGGCGCTCGA+GGG | 0.426714 | 2_2:-70317288 | Msa0268590:CDS |
| GTCTAAATTTCGGAGTAAAT+GGG | 0.428736 | 2_2:+70318109 | None:intergenic |
| TATGTCTTTCCTCAATGAAA+AGG | 0.429238 | 2_2:-70319638 | Msa0268590:CDS |
| AACTATTTGGGTCAATGGAT+TGG | 0.429624 | 2_2:+70319108 | None:intergenic |
| GCCGGGAGACATGGAAATAA+AGG | 0.429982 | 2_2:-70317789 | Msa0268590:CDS |
| GTATATCAATGTTCAGTCTT+CGG | 0.430453 | 2_2:+70319449 | None:intergenic |
| CCATTGACCCAAATAGTTCA+TGG | 0.431227 | 2_2:-70319103 | Msa0268590:CDS |
| AAGTAGAGATGAATACTATA+TGG | 0.431841 | 2_2:-70318837 | Msa0268590:CDS |
| TTCGTGAGGGTACCCCTAAT+GGG | 0.434009 | 2_2:+70317691 | None:intergenic |
| ATTATAACAGGCTGTTCAAA+AGG | 0.436541 | 2_2:+70317447 | None:intergenic |
| AGGACAACGGGTAGGCGAAA+TGG | 0.436703 | 2_2:-70317307 | Msa0268590:CDS |
| ACTTGTCTAAAACTACCTAT+AGG | 0.437083 | 2_2:-70317933 | Msa0268590:CDS |
| ATGCTTGGGGTTGGGAATGA+AGG | 0.438598 | 2_2:-70320249 | Msa0268590:CDS |
| TGGCACAATAATATCCGATT+GGG | 0.439186 | 2_2:-70319809 | Msa0268590:CDS |
| GAGGATTCTTTCGCCATTTG+AGG | 0.441108 | 2_2:+70318020 | None:intergenic |
| CATAAAGATTCAGGAAATAT+GGG | 0.442441 | 2_2:+70319541 | None:intergenic |
| AATTGAATTTCAGTTATTTG+TGG | 0.443334 | 2_2:-70320109 | Msa0268590:CDS |
| GATATCCATCCTAGTCACTA+TGG | 0.449002 | 2_2:-70319016 | Msa0268590:CDS |
| ACCTTTATTTCCATGTCTCC+CGG | 0.449391 | 2_2:+70317788 | None:intergenic |
| GTTCCCAGGGAATTCATTAG+AGG | 0.450312 | 2_2:+70319937 | None:intergenic |
| AAATTGAGTTATTTGGGTCC+TGG | 0.453699 | 2_2:-70319076 | Msa0268590:CDS |
| AACGGAATTTCAGTCTATAC+TGG | 0.455189 | 2_2:-70319829 | Msa0268590:CDS |
| ACTCGGCCCCTACCACCTAT+AGG | 0.455800 | 2_2:+70317918 | None:intergenic |
| AAATTGAAAATGCTTGGGGT+TGG | 0.457271 | 2_2:-70320258 | Msa0268590:CDS |
| TTAAATCAAATACAATTTGA+AGG | 0.460401 | 2_2:-70320207 | Msa0268590:CDS |
| AATGGAGGTTTGGGCGCTCG+AGG | 0.461267 | 2_2:-70317289 | Msa0268590:CDS |
| GCTCGTAATAATCTATCTTC+CGG | 0.462719 | 2_2:+70317990 | None:intergenic |
| GGTAGGCGAAATGGAGGTTT+GGG | 0.465784 | 2_2:-70317298 | Msa0268590:CDS |
| GGGTAGGCGAAATGGAGGTT+TGG | 0.465926 | 2_2:-70317299 | Msa0268590:CDS |
| GGGTAAATTAACGCCTCAAA+TGG | 0.467677 | 2_2:-70318033 | Msa0268590:CDS |
| GATCTAAAACTTGAGATAAT+GGG | 0.468332 | 2_2:+70319134 | None:intergenic |
| GGAAAGAGCGGAATATTTGA+TGG | 0.469164 | 2_2:-70317483 | Msa0268590:CDS |
| ATTTGTGGAAACATATCAAT+TGG | 0.470517 | 2_2:-70320094 | Msa0268590:CDS |
| ATTACAAGATCAATTTGGAT+TGG | 0.471878 | 2_2:-70319290 | Msa0268590:CDS |
| CATTTACTATAGAAGTTCCC+AGG | 0.473812 | 2_2:+70319923 | None:intergenic |
| CCGCTCTTTCCCGGATACTC+GGG | 0.478316 | 2_2:+70317495 | None:intergenic |
| TCTAGTTCTATCATCAGCTA+TGG | 0.479428 | 2_2:-70319710 | Msa0268590:CDS |
| AAGAATTTCTAACTATTGCA+TGG | 0.481440 | 2_2:-70318742 | Msa0268590:CDS |
| GGCGAAACAAGGAGGACAAC+GGG | 0.481846 | 2_2:-70317319 | Msa0268590:CDS |
| CCTGCGTGTTCGGCTATAGC+GGG | 0.483049 | 2_2:+70318518 | None:intergenic |
| CGTTTAGAAAATATAATTCG+AGG | 0.485783 | 2_2:-70319259 | Msa0268590:CDS |
| AATTGTGATTCTGGGATCTT+GGG | 0.486220 | 2_2:-70318078 | Msa0268590:CDS |
| AGATGTGAATTAGGAGGGAT+TGG | 0.486416 | 2_2:-70319487 | Msa0268590:CDS |
| TATAGACTGAAATTCCGTTA+TGG | 0.489213 | 2_2:+70319833 | None:intergenic |
| ATTGGAATGAAATTTGGAAT+GGG | 0.491267 | 2_2:-70319370 | Msa0268590:CDS |
| TGTTCATATCTCTCATCAAA+AGG | 0.491842 | 2_2:+70317594 | None:intergenic |
| CAACAAAGATGTGAATTAGG+AGG | 0.492034 | 2_2:-70319493 | Msa0268590:CDS |
| CGTTCAGAGTTGGACCATAA+CGG | 0.495197 | 2_2:-70319847 | Msa0268590:CDS |
| ATTTCCTGAATCTTTATGTA+CGG | 0.495836 | 2_2:-70319536 | Msa0268590:CDS |
| TTGGCAATTCACGCAAGGAT+TGG | 0.498707 | 2_2:-70318938 | Msa0268590:CDS |
| GATTGGAATGAAATTTGGAA+TGG | 0.498930 | 2_2:-70319371 | Msa0268590:CDS |
| CAAGTTGATGATAAAATACA+TGG | 0.502523 | 2_2:-70317393 | Msa0268590:CDS |
| GTGCATTGTTGGAACTGGAT+TGG | 0.504759 | 2_2:-70318570 | Msa0268590:CDS |
| TGGAGGTTTGGGCGCTCGAG+GGG | 0.505858 | 2_2:-70317287 | Msa0268590:CDS |
| CTCCTGAATCTAAGGCCACT+TGG | 0.506387 | 2_2:+70318543 | None:intergenic |
| TATCTATTATCGTTCAGAGT+TGG | 0.510246 | 2_2:-70319857 | Msa0268590:CDS |
| TGTACTCATTAGTGAACGTC+TGG | 0.512500 | 2_2:-70318240 | Msa0268590:CDS |
| AACAAAGATGTGAATTAGGA+GGG | 0.512939 | 2_2:-70319492 | Msa0268590:CDS |
| AGAACTACGATCTTTGGCTC+TGG | 0.513829 | 2_2:-70317118 | Msa0268590:CDS |
| GTTCGCCCCGTCAATCCTCC+AGG | 0.515843 | 2_2:+70319058 | None:intergenic |
| GATATGCCTTATTTGCAAGA+TGG | 0.518600 | 2_2:-70317738 | Msa0268590:CDS |
| TATTAGTAGCTTATATGCCA+TGG | 0.519177 | 2_2:-70318286 | Msa0268590:CDS |
| GTAAACAAACATCGAATCCA+TGG | 0.519391 | 2_2:-70317527 | Msa0268590:CDS |
| CAGAAACGTGAAATTAAAGT+AGG | 0.520965 | 2_2:-70317822 | Msa0268590:CDS |
| ATATAGTATTCATCTCTACT+TGG | 0.523407 | 2_2:+70318839 | None:intergenic |
| CTGGCACAATAATATCCGAT+TGG | 0.523488 | 2_2:-70319810 | Msa0268590:CDS |
| TGATAGAAAAGCAAGGATAT+GGG | 0.526528 | 2_2:-70319764 | Msa0268590:CDS |
| CGACAATTTGCTTGTGTAGG+CGG | 0.527978 | 2_2:-70319568 | Msa0268590:CDS |
| CTAGTTCTATCATCAGCTAT+GGG | 0.528023 | 2_2:-70319709 | Msa0268590:CDS |
| AAAGTAGGTGATAAAGTGGC+CGG | 0.529519 | 2_2:-70317807 | Msa0268590:CDS |
| AAAACTACCTATAGGTGGTA+GGG | 0.530153 | 2_2:-70317925 | Msa0268590:CDS |
| GCATTTACCTTTATGAACCT+GGG | 0.530323 | 2_2:+70318379 | None:intergenic |
| AAAGATTCTGGAGCATCCAC+AGG | 0.531781 | 2_2:+70317156 | None:intergenic |
| GCAGATGGTGCTGCTACTGT+TGG | 0.531919 | 2_2:-70318335 | Msa0268590:CDS |
| TAAATCAAATACAATTTGAA+GGG | 0.532005 | 2_2:-70320206 | Msa0268590:CDS |
| GATAAAGTGGCCGGGAGACA+TGG | 0.532845 | 2_2:-70317798 | Msa0268590:CDS |
| AGAAAGACTTCCAGATTCAA+AGG | 0.533242 | 2_2:-70317071 | Msa0268590:CDS |
| GGGTTGAAGACCATATCAAC+GGG | 0.535156 | 2_2:+70317711 | None:intergenic |
| CACAACAACCCCTTAAAGGA+AGG | 0.535519 | 2_2:-70317341 | Msa0268590:CDS |
| AATTCTTGACGGTATCGAGC+TGG | 0.536702 | 2_2:+70318758 | None:intergenic |
| TAAAACTACCTATAGGTGGT+AGG | 0.538804 | 2_2:-70317926 | Msa0268590:CDS |
| CAATAGTTAGAAATTCTTGA+CGG | 0.539101 | 2_2:+70318747 | None:intergenic |
| GGATATGGGCTCGTGTAAGT+AGG | 0.539731 | 2_2:-70319750 | Msa0268590:CDS |
| TAATCTATCTTCCGGAGCAT+AGG | 0.540322 | 2_2:+70317998 | None:intergenic |
| TCTATCTTCCGGAGCATAGG+AGG | 0.540370 | 2_2:+70318001 | None:intergenic |
| TACTCGGGTTCAAATATCCA+TGG | 0.546454 | 2_2:+70317510 | None:intergenic |
| TAGAAATTGATAGAAAAGCA+AGG | 0.548786 | 2_2:-70319771 | Msa0268590:CDS |
| TCCTGCGTGTTCGGCTATAG+CGG | 0.549505 | 2_2:+70318517 | None:intergenic |
| AGAATTTCTAACTATTGCAT+GGG | 0.549733 | 2_2:-70318741 | Msa0268590:CDS |
| AATTGTATTTGATTTAATCC+GGG | 0.549785 | 2_2:+70320213 | None:intergenic |
| CAGATATTGGAATGTTCACT+CGG | 0.551609 | 2_2:-70317657 | Msa0268590:CDS |
| TAGTGATTCTTTCAGGACCA+TGG | 0.551937 | 2_2:+70318153 | None:intergenic |
| GAATACTATATGGTAGCGAC+GGG | 0.553560 | 2_2:-70318827 | Msa0268590:CDS |
| GATGGTGCTGCTACTGTTGG+CGG | 0.553778 | 2_2:-70318332 | Msa0268590:CDS |
| TATCGACAATTTGCTTGTGT+AGG | 0.554239 | 2_2:-70319571 | Msa0268590:CDS |
| CATTGACCCAAATAGTTCAT+GGG | 0.556065 | 2_2:-70319102 | Msa0268590:CDS |
| GATTATTACGAGCTATACTT+GGG | 0.558504 | 2_2:-70317980 | Msa0268590:CDS |
| GCCGAGTTATTGATGTGAGA+TGG | 0.559021 | 2_2:-70317902 | Msa0268590:CDS |
| CTCGGAACTACGATTATTGG+AGG | 0.559077 | 2_2:-70317192 | Msa0268590:CDS |
| ATCTTGTAATAGATCTGCTA+CGG | 0.559735 | 2_2:+70319303 | None:intergenic |
| TCTGAATTATATATATCCGC+GGG | 0.562320 | 2_2:-70320018 | Msa0268590:CDS |
| AGACTTCCAGATTCAAAGGA+AGG | 0.563377 | 2_2:-70317067 | Msa0268590:CDS |
| GTCACTAAATTCTGAGGAGT+AGG | 0.563396 | 2_2:+70319202 | None:intergenic |
| GGAAGTCTTTCTCAGATACA+AGG | 0.565963 | 2_2:+70317082 | None:intergenic |
| AACAAGTGCATAATGTCCAC+TGG | 0.566338 | 2_2:+70317365 | None:intergenic |
| TGTTTCGCCCTTCCTTTAAG+GGG | 0.567625 | 2_2:+70317333 | None:intergenic |
| AATGTTCACTCGGATTAGCT+GGG | 0.569063 | 2_2:-70317647 | Msa0268590:CDS |
| AATCAAATATTGCAAAGCCC+TGG | 0.569397 | 2_2:-70319880 | Msa0268590:CDS |
| GAAAGAATCCTCCTATGCTC+CGG | 0.570879 | 2_2:-70318009 | Msa0268590:CDS |
| TGAATACTATATGGTAGCGA+CGG | 0.571395 | 2_2:-70318828 | Msa0268590:CDS |
| CACAATAATATCCGATTGGG+GGG | 0.571960 | 2_2:-70319806 | Msa0268590:CDS |
| TCCTACATTGATTCCTTCCG+AGG | 0.572209 | 2_2:+70318973 | None:intergenic |
| CAAATGCGTCCATAGTGACT+AGG | 0.573493 | 2_2:+70319007 | None:intergenic |
| CTCTGAATTATATATATCCG+CGG | 0.577667 | 2_2:-70320019 | Msa0268590:CDS |
| CTTAAAGGAAGGGCGAAACA+AGG | 0.579473 | 2_2:-70317330 | Msa0268590:CDS |
| AATTAAAGTAGGTGATAAAG+TGG | 0.581077 | 2_2:-70317811 | Msa0268590:CDS |
| ATATTTGAACCCGAGTATCC+GGG | 0.581389 | 2_2:-70317504 | Msa0268590:CDS |
| CAGACTCATGTGACAAGCCA+TGG | 0.581560 | 2_2:-70318170 | Msa0268590:CDS |
| CTGTCCTACATTCATTCGTG+AGG | 0.583153 | 2_2:+70317677 | None:intergenic |
| AGTAAATGGGCTTCTAGATG+TGG | 0.584284 | 2_2:+70318122 | None:intergenic |
| CCCGAGTATCCGGGAAAGAG+CGG | 0.584519 | 2_2:-70317495 | Msa0268590:CDS |
| TGTCCAATTGACACCTCGGA+AGG | 0.584582 | 2_2:-70318986 | Msa0268590:CDS |
| GTCTTTCCTCAATGAAAAGG+AGG | 0.586724 | 2_2:-70319635 | Msa0268590:CDS |
| CGCGGATATATATAATTCAG+AGG | 0.586801 | 2_2:+70320020 | None:intergenic |
| ATTTACTATAGAAGTTCCCA+GGG | 0.587463 | 2_2:+70319924 | None:intergenic |
| ATGCTCGATAAAAGGAATCA+GGG | 0.587469 | 2_2:+70318664 | None:intergenic |
| TCTGAACGATAATAGATACC+AGG | 0.589979 | 2_2:+70319862 | None:intergenic |
| TGGGATCTTGGGTAGAAACA+GGG | 0.592045 | 2_2:-70318067 | Msa0268590:CDS |
| TCAGAATTGTAACCTTCCCA+TGG | 0.596416 | 2_2:+70318269 | None:intergenic |
| ATTAGTAGCTTATATGCCAT+GGG | 0.596673 | 2_2:-70318285 | Msa0268590:CDS |
| AAGTAGGTGATAAAGTGGCC+GGG | 0.597954 | 2_2:-70317806 | Msa0268590:CDS |
| GGGCGAAACAAGGAGGACAA+CGG | 0.598993 | 2_2:-70317320 | Msa0268590:CDS |
| TCCATCTCACATCAATAACT+CGG | 0.602104 | 2_2:+70317901 | None:intergenic |
| ATTCCTCTAATGAATTCCCT+GGG | 0.606971 | 2_2:-70319940 | Msa0268590:CDS |
| CACGCAAGGATTGGTCCTTG+GGG | 0.608804 | 2_2:-70318929 | Msa0268590:CDS |
| GTAGCTTATATGCCATGGGA+AGG | 0.611195 | 2_2:-70318281 | Msa0268590:CDS |
| TGTCCTACATTCATTCGTGA+GGG | 0.611498 | 2_2:+70317678 | None:intergenic |
| GATCCTTGGCAATTCACGCA+AGG | 0.614349 | 2_2:-70318943 | Msa0268590:CDS |
| AAAATACATGGACGTTCCAG+TGG | 0.614997 | 2_2:-70317381 | Msa0268590:CDS |
| AACTGGATTGGAACGCCAAG+TGG | 0.615266 | 2_2:-70318558 | Msa0268590:CDS |
| GTTGAAGTCACTAAATTCTG+AGG | 0.617323 | 2_2:+70319196 | None:intergenic |
| AAACTACCTATAGGTGGTAG+GGG | 0.618823 | 2_2:-70317924 | Msa0268590:CDS |
| TGATGAGAGATATGAACAGG+AGG | 0.620223 | 2_2:-70317589 | Msa0268590:CDS |
| AATCCTTGCGTGAATTGCCA+AGG | 0.621341 | 2_2:+70318940 | None:intergenic |
| CATTTGTCCAATTGACACCT+CGG | 0.622149 | 2_2:-70318990 | Msa0268590:CDS |
| GTACCCTCACGAATGAATGT+AGG | 0.622385 | 2_2:-70317681 | Msa0268590:CDS |
| TGGGTTGAAGACCATATCAA+CGG | 0.622611 | 2_2:+70317710 | None:intergenic |
| TGCGTCCATAGTGACTAGGA+TGG | 0.626242 | 2_2:+70319011 | None:intergenic |
| AAACAAGGAGGACAACGGGT+AGG | 0.626804 | 2_2:-70317315 | Msa0268590:CDS |
| GGCACAATAATATCCGATTG+GGG | 0.627268 | 2_2:-70319808 | Msa0268590:CDS |
| GAAGGAATGTCTACACTACC+CGG | 0.627870 | 2_2:-70320231 | Msa0268590:CDS |
| ACGCAAGGATTGGTCCTTGG+GGG | 0.629421 | 2_2:-70318928 | Msa0268590:CDS |
| TTGAGTTATTTGGGTCCTGG+AGG | 0.630319 | 2_2:-70319073 | Msa0268590:CDS |
| TGGGTCCTGGAGGATTGACG+GGG | 0.631061 | 2_2:-70319063 | Msa0268590:CDS |
| GGGATCTTGGGTAGAAACAG+GGG | 0.635116 | 2_2:-70318066 | Msa0268590:CDS |
| ACAACAACCCCTTAAAGGAA+GGG | 0.636584 | 2_2:-70317340 | Msa0268590:CDS |
| ACAATAATATCCGATTGGGG+GGG | 0.637953 | 2_2:-70319805 | Msa0268590:CDS |
| CTGAACGATAATAGATACCA+GGG | 0.641198 | 2_2:+70319863 | None:intergenic |
| ACCTCGGAAGGAATCAATGT+AGG | 0.642821 | 2_2:-70318974 | Msa0268590:CDS |
| GGGGAAATTGAAAATGCTTG+GGG | 0.643696 | 2_2:-70320262 | Msa0268590:CDS |
| AGGAACAATACCTAAACCTG+TGG | 0.656849 | 2_2:-70317172 | Msa0268590:CDS |
| AAAGCTCGTCAAGAAGTACT+CGG | 0.659322 | 2_2:-70317210 | Msa0268590:CDS |
| ACAACGGGTAGGCGAAATGG+AGG | 0.659407 | 2_2:-70317304 | Msa0268590:CDS |
| TATGGTCTTCAACCCATTAG+GGG | 0.670295 | 2_2:-70317703 | Msa0268590:CDS |
| GATTCAGGTATCGACCTCAA+AGG | 0.672007 | 2_2:-70317958 | Msa0268590:CDS |
| TGTCTAAAACTACCTATAGG+TGG | 0.673297 | 2_2:-70317930 | Msa0268590:CDS |
| GCACAATAATATCCGATTGG+GGG | 0.683666 | 2_2:-70319807 | Msa0268590:CDS |
| CCCGCTATAGCCGAACACGC+AGG | 0.684746 | 2_2:-70318518 | Msa0268590:CDS |
| GAATATTTGATGGAAGAACA+GGG | 0.689025 | 2_2:-70317473 | Msa0268590:CDS |
| GCGAGATATATTGACAGCTG+CGG | 0.702124 | 2_2:-70319401 | Msa0268590:CDS |
| GCAGCTGTCAATATATCTCG+CGG | 0.702925 | 2_2:+70319403 | None:intergenic |
| AAAGGAAGGGCGAAACAAGG+AGG | 0.708508 | 2_2:-70317327 | Msa0268590:CDS |
| ACTGAATCGAGGTATTCAGG+AGG | 0.734798 | 2_2:-70318792 | Msa0268590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGTATTTGATTTAATC+CGG | + | chr2_2:70317114-70317133 | None:intergenic | 15.0% |
| !! | TTAAATCAAATACAATTTGA+AGG | - | chr2_2:70317116-70317135 | Msa0268590:CDS | 15.0% |
| !! | TAAATCAAATACAATTTGAA+GGG | - | chr2_2:70317117-70317136 | Msa0268590:CDS | 15.0% |
| !!! | CAATAAAAATAATTTGTTCT+TGG | + | chr2_2:70317358-70317377 | None:intergenic | 15.0% |
| !!! | CAAGAACAAATTATTTTTAT+TGG | - | chr2_2:70317356-70317375 | Msa0268590:CDS | 15.0% |
| !! | TGAATTAATTTCAAGATATA+AGG | + | chr2_2:70319909-70319928 | None:intergenic | 15.0% |
| !!! | AATTGTATTTGATTTAATCC+GGG | + | chr2_2:70317113-70317132 | None:intergenic | 20.0% |
| !! | AATTGAATTTCAGTTATTTG+TGG | - | chr2_2:70317214-70317233 | Msa0268590:CDS | 20.0% |
| !!! | ATTAATTTGGAAAAACAGTA+GGG | - | chr2_2:70317328-70317347 | Msa0268590:CDS | 20.0% |
| !! | AAAAGGAGGAAAAAAAAATA+GGG | - | chr2_2:70317702-70317721 | Msa0268590:CDS | 20.0% |
| !! | TAACAAAAATGTATTGTTCT+CGG | + | chr2_2:70317900-70317919 | None:intergenic | 20.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | - | chr2_2:70318853-70318872 | Msa0268590:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | - | chr2_2:70318854-70318873 | Msa0268590:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | + | chr2_2:70319180-70319199 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | + | chr2_2:70319227-70319246 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | + | chr2_2:70319477-70319496 | None:intergenic | 20.0% |
| ! | GTTTCCAAAAATTGAAGATA+CGG | - | chr2_2:70317184-70317203 | Msa0268590:CDS | 25.0% |
| ! | ATTTGTGGAAACATATCAAT+TGG | - | chr2_2:70317229-70317248 | Msa0268590:CDS | 25.0% |
| !! | GATTAATTTGGAAAAACAGT+AGG | - | chr2_2:70317327-70317346 | Msa0268590:CDS | 25.0% |
| ! | TAGAAATTGATAGAAAAGCA+AGG | - | chr2_2:70317552-70317571 | Msa0268590:CDS | 25.0% |
| ! | AGGAAAGACATAAAAATTTC+GGG | + | chr2_2:70317677-70317696 | None:intergenic | 25.0% |
| ! | GAGGAAAGACATAAAAATTT+CGG | + | chr2_2:70317678-70317697 | None:intergenic | 25.0% |
| ! | GAAAAGGAGGAAAAAAAAAT+AGG | - | chr2_2:70317701-70317720 | Msa0268590:CDS | 25.0% |
| ! | CATAAAGATTCAGGAAATAT+GGG | + | chr2_2:70317785-70317804 | None:intergenic | 25.0% |
| ! | ACATAAAGATTCAGGAAATA+TGG | + | chr2_2:70317786-70317805 | None:intergenic | 25.0% |
| ! | ATTTCCTGAATCTTTATGTA+CGG | - | chr2_2:70317787-70317806 | Msa0268590:CDS | 25.0% |
| ! | TTTCAACAAAGATGTGAATT+AGG | - | chr2_2:70317827-70317846 | Msa0268590:CDS | 25.0% |
| ! | AACAAAAATGTATTGTTCTC+GGG | + | chr2_2:70317899-70317918 | None:intergenic | 25.0% |
| ! | CATTTGATTGGAATGAAATT+TGG | - | chr2_2:70317947-70317966 | Msa0268590:CDS | 25.0% |
| !! | ATTGGAATGAAATTTGGAAT+GGG | - | chr2_2:70317953-70317972 | Msa0268590:CDS | 25.0% |
| ! | GATCTATTACAAGATCAATT+TGG | - | chr2_2:70318028-70318047 | Msa0268590:CDS | 25.0% |
| ! | ATTACAAGATCAATTTGGAT+TGG | - | chr2_2:70318033-70318052 | Msa0268590:CDS | 25.0% |
| ! | CGTTTAGAAAATATAATTCG+AGG | - | chr2_2:70318064-70318083 | Msa0268590:CDS | 25.0% |
| !! | GATCTAAAACTTGAGATAAT+GGG | + | chr2_2:70318192-70318211 | None:intergenic | 25.0% |
| ! | CTCTCAGAAATTTCAAAAAA+TGG | + | chr2_2:70318433-70318452 | None:intergenic | 25.0% |
| ! | ATATAGTATTCATCTCTACT+TGG | + | chr2_2:70318487-70318506 | None:intergenic | 25.0% |
| ! | AAGTAGAGATGAATACTATA+TGG | - | chr2_2:70318486-70318505 | Msa0268590:CDS | 25.0% |
| ! | CAATAGTTAGAAATTCTTGA+CGG | + | chr2_2:70318579-70318598 | None:intergenic | 25.0% |
| ! | AAGAATTTCTAACTATTGCA+TGG | - | chr2_2:70318581-70318600 | Msa0268590:CDS | 25.0% |
| ! | AGAATTTCTAACTATTGCAT+GGG | - | chr2_2:70318582-70318601 | Msa0268590:CDS | 25.0% |
| ! | CCAATAGAAAAATATTGGAA+GGG | + | chr2_2:70318634-70318653 | None:intergenic | 25.0% |
| ! | TCCAATAGAAAAATATTGGA+AGG | + | chr2_2:70318635-70318654 | None:intergenic | 25.0% |
| ! | AAGCTCCAATAGAAAAATAT+TGG | + | chr2_2:70318639-70318658 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | - | chr2_2:70318847-70318866 | Msa0268590:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | + | chr2_2:70318895-70318914 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | - | chr2_2:70318954-70318973 | Msa0268590:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | - | chr2_2:70318955-70318974 | Msa0268590:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | - | chr2_2:70319237-70319256 | Msa0268590:CDS | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | - | chr2_2:70319512-70319531 | Msa0268590:CDS | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | + | chr2_2:70319891-70319910 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | - | chr2_2:70319930-70319949 | Msa0268590:CDS | 25.0% |
| !! | GGTTTTGTAGATTCATTGAT+CGG | - | chr2_2:70317138-70317157 | Msa0268590:CDS | 30.0% |
| ! | GTTTTGTAGATTCATTGATC+GGG | - | chr2_2:70317139-70317158 | Msa0268590:CDS | 30.0% |
| ! | TTTTGTAGATTCATTGATCG+GGG | - | chr2_2:70317140-70317159 | Msa0268590:CDS | 30.0% |
| ! | TGATCCGTATCTTCAATTTT+TGG | + | chr2_2:70317191-70317210 | None:intergenic | 30.0% |
| ! | GCATCTTTTTCTTTTATCGA+GGG | + | chr2_2:70317260-70317279 | None:intergenic | 30.0% |
| ! | AGCATCTTTTTCTTTTATCG+AGG | + | chr2_2:70317261-70317280 | None:intergenic | 30.0% |
| CTCTGAATTATATATATCCG+CGG | - | chr2_2:70317304-70317323 | Msa0268590:CDS | 30.0% | |
| TCTGAATTATATATATCCGC+GGG | - | chr2_2:70317305-70317324 | Msa0268590:CDS | 30.0% | |
| ATTTACTATAGAAGTTCCCA+GGG | + | chr2_2:70317402-70317421 | None:intergenic | 30.0% | |
| TATCTATTATCGTTCAGAGT+TGG | - | chr2_2:70317466-70317485 | Msa0268590:CDS | 30.0% | |
| TATAGACTGAAATTCCGTTA+TGG | + | chr2_2:70317493-70317512 | None:intergenic | 30.0% | |
| TTGATAGAAAAGCAAGGATA+TGG | - | chr2_2:70317558-70317577 | Msa0268590:CDS | 30.0% | |
| TGATAGAAAAGCAAGGATAT+GGG | - | chr2_2:70317559-70317578 | Msa0268590:CDS | 30.0% | |
| GGAAAGACATAAAAATTTCG+GGG | + | chr2_2:70317676-70317695 | None:intergenic | 30.0% | |
| TATGTCTTTCCTCAATGAAA+AGG | - | chr2_2:70317685-70317704 | Msa0268590:CDS | 30.0% | |
| !!! | TTTTTTCCTCCTTTTCATTG+AGG | + | chr2_2:70317697-70317716 | None:intergenic | 30.0% |
| !! | GTCAAAAGAAAATGCCATTT+TGG | - | chr2_2:70317724-70317743 | Msa0268590:CDS | 30.0% |
| TTGTCGATAAAACTCCAAAA+TGG | + | chr2_2:70317741-70317760 | None:intergenic | 30.0% | |
| AATTCCGTACATAAAGATTC+AGG | + | chr2_2:70317794-70317813 | None:intergenic | 30.0% | |
| AACAAAGATGTGAATTAGGA+GGG | - | chr2_2:70317831-70317850 | Msa0268590:CDS | 30.0% | |
| GTATATCAATGTTCAGTCTT+CGG | + | chr2_2:70317877-70317896 | None:intergenic | 30.0% | |
| GATTGGAATGAAATTTGGAA+TGG | - | chr2_2:70317952-70317971 | Msa0268590:CDS | 30.0% | |
| ATCTTGTAATAGATCTGCTA+CGG | + | chr2_2:70318023-70318042 | None:intergenic | 30.0% | |
| ATAATTCGAGGAACTATATC+TGG | - | chr2_2:70318076-70318095 | Msa0268590:CDS | 30.0% | |
| GATTCATAAGTGGTTGTTAA+TGG | + | chr2_2:70318154-70318173 | None:intergenic | 30.0% | |
| !!! | ACCACTTATGAATCGTTTTT+TGG | - | chr2_2:70318160-70318179 | Msa0268590:CDS | 30.0% |
| TCCAAAAAACGATTCATAAG+TGG | + | chr2_2:70318164-70318183 | None:intergenic | 30.0% | |
| ! | CGATCTAAAACTTGAGATAA+TGG | + | chr2_2:70318193-70318212 | None:intergenic | 30.0% |
| ! | TTTTCTCCCATGAACTATTT+GGG | + | chr2_2:70318230-70318249 | None:intergenic | 30.0% |
| ! | ATTTTCTCCCATGAACTATT+TGG | + | chr2_2:70318231-70318250 | None:intergenic | 30.0% |
| TGGGAGAAAATTGAGTTATT+TGG | - | chr2_2:70318240-70318259 | Msa0268590:CDS | 30.0% | |
| GGGAGAAAATTGAGTTATTT+GGG | - | chr2_2:70318241-70318260 | Msa0268590:CDS | 30.0% | |
| !!! | AATTTTTTAGCACTGAATCG+AGG | - | chr2_2:70318520-70318539 | Msa0268590:CDS | 30.0% |
| ! | CCCTTCCAATATTTTTCTAT+TGG | - | chr2_2:70318631-70318650 | Msa0268590:CDS | 30.0% |
| !! | ATGCATGCAAGTATTTTTGT+TGG | + | chr2_2:70318917-70318936 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | - | chr2_2:70319037-70319056 | Msa0268590:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | - | chr2_2:70319038-70319057 | Msa0268590:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | + | chr2_2:70319217-70319236 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | + | chr2_2:70319218-70319237 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | - | chr2_2:70319222-70319241 | Msa0268590:CDS | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | - | chr2_2:70319236-70319255 | Msa0268590:CDS | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | - | chr2_2:70319342-70319361 | Msa0268590:CDS | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | - | chr2_2:70319343-70319362 | Msa0268590:CDS | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | + | chr2_2:70319382-70319401 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | - | chr2_2:70319390-70319409 | Msa0268590:CDS | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | - | chr2_2:70319501-70319520 | Msa0268590:CDS | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | - | chr2_2:70319563-70319582 | Msa0268590:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | - | chr2_2:70319653-70319672 | Msa0268590:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | + | chr2_2:70319732-70319751 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | - | chr2_2:70319731-70319750 | Msa0268590:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | + | chr2_2:70319763-70319782 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | - | chr2_2:70319850-70319869 | Msa0268590:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | + | chr2_2:70319879-70319898 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | - | chr2_2:70319879-70319898 | Msa0268590:CDS | 30.0% | |
| ATGGGGAAATTGAAAATGCT+TGG | - | chr2_2:70317059-70317078 | Msa0268590:CDS | 35.0% | |
| TGGGGAAATTGAAAATGCTT+GGG | - | chr2_2:70317060-70317079 | Msa0268590:CDS | 35.0% | |
| AAATTGAAAATGCTTGGGGT+TGG | - | chr2_2:70317065-70317084 | Msa0268590:CDS | 35.0% | |
| AATTGAAAATGCTTGGGGTT+GGG | - | chr2_2:70317066-70317085 | Msa0268590:CDS | 35.0% | |
| CGCGGATATATATAATTCAG+AGG | + | chr2_2:70317306-70317325 | None:intergenic | 35.0% | |
| ATATATCCGCGGGATTAATT+TGG | - | chr2_2:70317315-70317334 | Msa0268590:CDS | 35.0% | |
| ! | GTTTTTCCAAATTAATCCCG+CGG | + | chr2_2:70317324-70317343 | None:intergenic | 35.0% |
| ATTCCTCTAATGAATTCCCT+GGG | - | chr2_2:70317383-70317402 | Msa0268590:CDS | 35.0% | |
| CATTTACTATAGAAGTTCCC+AGG | + | chr2_2:70317403-70317422 | None:intergenic | 35.0% | |
| CTGGGAACTTCTATAGTAAA+TGG | - | chr2_2:70317401-70317420 | Msa0268590:CDS | 35.0% | |
| AATCAAATATTGCAAAGCCC+TGG | - | chr2_2:70317443-70317462 | Msa0268590:CDS | 35.0% | |
| CTGAACGATAATAGATACCA+GGG | + | chr2_2:70317463-70317482 | None:intergenic | 35.0% | |
| TCTGAACGATAATAGATACC+AGG | + | chr2_2:70317464-70317483 | None:intergenic | 35.0% | |
| AACGGAATTTCAGTCTATAC+TGG | - | chr2_2:70317494-70317513 | Msa0268590:CDS | 35.0% | |
| TGGCACAATAATATCCGATT+GGG | - | chr2_2:70317514-70317533 | Msa0268590:CDS | 35.0% | |
| !! | TCTAGTTCTATCATCAGCTA+TGG | - | chr2_2:70317613-70317632 | Msa0268590:CDS | 35.0% |
| !! | CTAGTTCTATCATCAGCTAT+GGG | - | chr2_2:70317614-70317633 | Msa0268590:CDS | 35.0% |
| ! | TATCGACAATTTGCTTGTGT+AGG | - | chr2_2:70317752-70317771 | Msa0268590:CDS | 35.0% |
| CAACAAAGATGTGAATTAGG+AGG | - | chr2_2:70317830-70317849 | Msa0268590:CDS | 35.0% | |
| TCAGTCTTCGGTTCATATTT+CGG | + | chr2_2:70317865-70317884 | None:intergenic | 35.0% | |
| GTTGAAGTCACTAAATTCTG+AGG | + | chr2_2:70318130-70318149 | None:intergenic | 35.0% | |
| AACTATTTGGGTCAATGGAT+TGG | + | chr2_2:70318218-70318237 | None:intergenic | 35.0% | |
| CATTGACCCAAATAGTTCAT+GGG | - | chr2_2:70318221-70318240 | Msa0268590:CDS | 35.0% | |
| AAATTGAGTTATTTGGGTCC+TGG | - | chr2_2:70318247-70318266 | Msa0268590:CDS | 35.0% | |
| GGAATCAATGTAGGACTTAT+TGG | - | chr2_2:70318358-70318377 | Msa0268590:CDS | 35.0% | |
| ! | TGAATACTATATGGTAGCGA+CGG | - | chr2_2:70318495-70318514 | Msa0268590:CDS | 35.0% |
| ATGCTCGATAAAAGGAATCA+GGG | + | chr2_2:70318662-70318681 | None:intergenic | 35.0% | |
| TATGCTCGATAAAAGGAATC+AGG | + | chr2_2:70318663-70318682 | None:intergenic | 35.0% | |
| GCATCATTATGCTCGATAAA+AGG | + | chr2_2:70318670-70318689 | None:intergenic | 35.0% | |
| ! | AGTTCCAACAATGCACTTTT+CGG | + | chr2_2:70318749-70318768 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | - | chr2_2:70318937-70318956 | Msa0268590:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | + | chr2_2:70318947-70318966 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | - | chr2_2:70318973-70318992 | Msa0268590:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | - | chr2_2:70319245-70319264 | Msa0268590:CDS | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | - | chr2_2:70319269-70319288 | Msa0268590:CDS | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | - | chr2_2:70319270-70319289 | Msa0268590:CDS | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | + | chr2_2:70319336-70319355 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | - | chr2_2:70319393-70319412 | Msa0268590:CDS | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | - | chr2_2:70319397-70319416 | Msa0268590:CDS | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | - | chr2_2:70319398-70319417 | Msa0268590:CDS | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | + | chr2_2:70319425-70319444 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | - | chr2_2:70319438-70319457 | Msa0268590:CDS | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | + | chr2_2:70319449-70319468 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | - | chr2_2:70319585-70319604 | Msa0268590:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | - | chr2_2:70319619-70319638 | Msa0268590:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | - | chr2_2:70319666-70319685 | Msa0268590:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | + | chr2_2:70319796-70319815 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | - | chr2_2:70319796-70319815 | Msa0268590:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | - | chr2_2:70319849-70319868 | Msa0268590:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | - | chr2_2:70320252-70320271 | Msa0268590:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | + | chr2_2:70320265-70320284 | None:intergenic | 35.0% | |
| GGGGAAATTGAAAATGCTTG+GGG | - | chr2_2:70317061-70317080 | Msa0268590:CDS | 40.0% | |
| CATTCCTCTAATGAATTCCC+TGG | - | chr2_2:70317382-70317401 | Msa0268590:CDS | 40.0% | |
| CTGGCACAATAATATCCGAT+TGG | - | chr2_2:70317513-70317532 | Msa0268590:CDS | 40.0% | |
| GGCACAATAATATCCGATTG+GGG | - | chr2_2:70317515-70317534 | Msa0268590:CDS | 40.0% | |
| GCACAATAATATCCGATTGG+GGG | - | chr2_2:70317516-70317535 | Msa0268590:CDS | 40.0% | |
| CACAATAATATCCGATTGGG+GGG | - | chr2_2:70317517-70317536 | Msa0268590:CDS | 40.0% | |
| ACAATAATATCCGATTGGGG+GGG | - | chr2_2:70317518-70317537 | Msa0268590:CDS | 40.0% | |
| GTCTTTCCTCAATGAAAAGG+AGG | - | chr2_2:70317688-70317707 | Msa0268590:CDS | 40.0% | |
| AGATGTGAATTAGGAGGGAT+TGG | - | chr2_2:70317836-70317855 | Msa0268590:CDS | 40.0% | |
| ! | GTCACTAAATTCTGAGGAGT+AGG | + | chr2_2:70318124-70318143 | None:intergenic | 40.0% |
| CCATGAACTATTTGGGTCAA+TGG | + | chr2_2:70318223-70318242 | None:intergenic | 40.0% | |
| CCATTGACCCAAATAGTTCA+TGG | - | chr2_2:70318220-70318239 | Msa0268590:CDS | 40.0% | |
| !!! | GAACTGCTAGTTTTCGGATA+CGG | - | chr2_2:70318284-70318303 | Msa0268590:CDS | 40.0% |
| !!! | AACTGCTAGTTTTCGGATAC+GGG | - | chr2_2:70318285-70318304 | Msa0268590:CDS | 40.0% |
| GATATCCATCCTAGTCACTA+TGG | - | chr2_2:70318307-70318326 | Msa0268590:CDS | 40.0% | |
| CATTTGTCCAATTGACACCT+CGG | - | chr2_2:70318333-70318352 | Msa0268590:CDS | 40.0% | |
| TGTAGGACTTATTGGATCCT+TGG | - | chr2_2:70318366-70318385 | Msa0268590:CDS | 40.0% | |
| ! | GAATACTATATGGTAGCGAC+GGG | - | chr2_2:70318496-70318515 | Msa0268590:CDS | 40.0% |
| TCTAACTATTGCATGGGAAC+AGG | - | chr2_2:70318588-70318607 | Msa0268590:CDS | 40.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | - | chr2_2:70318748-70318767 | Msa0268590:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | - | chr2_2:70318927-70318946 | Msa0268590:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | + | chr2_2:70318948-70318967 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | + | chr2_2:70319057-70319076 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | - | chr2_2:70319083-70319102 | Msa0268590:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | + | chr2_2:70319173-70319192 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | + | chr2_2:70319204-70319223 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | - | chr2_2:70319244-70319263 | Msa0268590:CDS | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | - | chr2_2:70319290-70319309 | Msa0268590:CDS | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | + | chr2_2:70319328-70319347 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | - | chr2_2:70319399-70319418 | Msa0268590:CDS | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | - | chr2_2:70319516-70319535 | Msa0268590:CDS | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | + | chr2_2:70319538-70319557 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | + | chr2_2:70319594-70319613 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | + | chr2_2:70319616-70319635 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | - | chr2_2:70319618-70319637 | Msa0268590:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | - | chr2_2:70319620-70319639 | Msa0268590:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | + | chr2_2:70319648-70319667 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | - | chr2_2:70319676-70319695 | Msa0268590:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | - | chr2_2:70319734-70319753 | Msa0268590:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | + | chr2_2:70319816-70319835 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | - | chr2_2:70319818-70319837 | Msa0268590:CDS | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | - | chr2_2:70319819-70319838 | Msa0268590:CDS | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | + | chr2_2:70319840-70319859 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | - | chr2_2:70319840-70319859 | Msa0268590:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | - | chr2_2:70319942-70319961 | Msa0268590:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | + | chr2_2:70319961-70319980 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | - | chr2_2:70319978-70319997 | Msa0268590:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | - | chr2_2:70319983-70320002 | Msa0268590:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | + | chr2_2:70319994-70320013 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | - | chr2_2:70320113-70320132 | Msa0268590:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | - | chr2_2:70320128-70320147 | Msa0268590:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | - | chr2_2:70320151-70320170 | Msa0268590:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | + | chr2_2:70320182-70320201 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | + | chr2_2:70320244-70320263 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | - | chr2_2:70320256-70320275 | Msa0268590:CDS | 40.0% | |
| GAAGGAATGTCTACACTACC+CGG | - | chr2_2:70317092-70317111 | Msa0268590:CDS | 45.0% | |
| GTTCCCAGGGAATTCATTAG+AGG | + | chr2_2:70317389-70317408 | None:intergenic | 45.0% | |
| CGTTCAGAGTTGGACCATAA+CGG | - | chr2_2:70317476-70317495 | Msa0268590:CDS | 45.0% | |
| ! | CGACAATTTGCTTGTGTAGG+CGG | - | chr2_2:70317755-70317774 | Msa0268590:CDS | 45.0% |
| GCAGCTGTCAATATATCTCG+CGG | + | chr2_2:70317923-70317942 | None:intergenic | 45.0% | |
| GCGAGATATATTGACAGCTG+CGG | - | chr2_2:70317922-70317941 | Msa0268590:CDS | 45.0% | |
| ACAGCTGCGGATCATTTGAT+TGG | - | chr2_2:70317935-70317954 | Msa0268590:CDS | 45.0% | |
| TTGAGTTATTTGGGTCCTGG+AGG | - | chr2_2:70318250-70318269 | Msa0268590:CDS | 45.0% | |
| CAAATGCGTCCATAGTGACT+AGG | + | chr2_2:70318319-70318338 | None:intergenic | 45.0% | |
| ! | ATTCCTTCCGAGGTGTCAAT+TGG | + | chr2_2:70318343-70318362 | None:intergenic | 45.0% |
| ACCTCGGAAGGAATCAATGT+AGG | - | chr2_2:70318349-70318368 | Msa0268590:CDS | 45.0% | |
| !! | TCCTACATTGATTCCTTCCG+AGG | + | chr2_2:70318353-70318372 | None:intergenic | 45.0% |
| AATCCTTGCGTGAATTGCCA+AGG | + | chr2_2:70318386-70318405 | None:intergenic | 45.0% | |
| TTGGCAATTCACGCAAGGAT+TGG | - | chr2_2:70318385-70318404 | Msa0268590:CDS | 45.0% | |
| ! | AGCACTGAATCGAGGTATTC+AGG | - | chr2_2:70318528-70318547 | Msa0268590:CDS | 45.0% |
| ! | ACTGAATCGAGGTATTCAGG+AGG | - | chr2_2:70318531-70318550 | Msa0268590:CDS | 45.0% |
| ! | AATTCTTGACGGTATCGAGC+TGG | + | chr2_2:70318568-70318587 | None:intergenic | 45.0% |
| GTCAAGCAGTTCCTCTTTCT+CGG | - | chr2_2:70318722-70318741 | Msa0268590:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | - | chr2_2:70318753-70318772 | Msa0268590:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | + | chr2_2:70318818-70318837 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | - | chr2_2:70319042-70319061 | Msa0268590:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | - | chr2_2:70319256-70319275 | Msa0268590:CDS | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | + | chr2_2:70319306-70319325 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | - | chr2_2:70319314-70319333 | Msa0268590:CDS | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | - | chr2_2:70319350-70319369 | Msa0268590:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | - | chr2_2:70319365-70319384 | Msa0268590:CDS | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | - | chr2_2:70319421-70319440 | Msa0268590:CDS | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | - | chr2_2:70319517-70319536 | Msa0268590:CDS | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | - | chr2_2:70319602-70319621 | Msa0268590:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | + | chr2_2:70319615-70319634 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | - | chr2_2:70319642-70319661 | Msa0268590:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | + | chr2_2:70319649-70319668 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | - | chr2_2:70319675-70319694 | Msa0268590:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | - | chr2_2:70319982-70320001 | Msa0268590:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | + | chr2_2:70319993-70320012 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | + | chr2_2:70319995-70320014 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | - | chr2_2:70319993-70320012 | Msa0268590:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | - | chr2_2:70320131-70320150 | Msa0268590:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | + | chr2_2:70320170-70320189 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | - | chr2_2:70320199-70320218 | Msa0268590:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | - | chr2_2:70320205-70320224 | Msa0268590:CDS | 45.0% |
| ATGCTTGGGGTTGGGAATGA+AGG | - | chr2_2:70317074-70317093 | Msa0268590:CDS | 50.0% | |
| CTCTAATCTTCCCCCCCAAT+CGG | + | chr2_2:70317531-70317550 | None:intergenic | 50.0% | |
| GGATATGGGCTCGTGTAAGT+AGG | - | chr2_2:70317573-70317592 | Msa0268590:CDS | 50.0% | |
| TTTGGGTCCTGGAGGATTGA+CGG | - | chr2_2:70318258-70318277 | Msa0268590:CDS | 50.0% | |
| TGCGTCCATAGTGACTAGGA+TGG | + | chr2_2:70318315-70318334 | None:intergenic | 50.0% | |
| TGTCCAATTGACACCTCGGA+AGG | - | chr2_2:70318337-70318356 | Msa0268590:CDS | 50.0% | |
| GATCCTTGGCAATTCACGCA+AGG | - | chr2_2:70318380-70318399 | Msa0268590:CDS | 50.0% | |
| !! | TTCACGCAAGGATTGGTCCT+TGG | - | chr2_2:70318392-70318411 | Msa0268590:CDS | 50.0% |
| !! | TCACGCAAGGATTGGTCCTT+GGG | - | chr2_2:70318393-70318412 | Msa0268590:CDS | 50.0% |
| GGACTTTCTATAGACCCCCA+AGG | + | chr2_2:70318412-70318431 | None:intergenic | 50.0% | |
| ! | CACTTTTCGGACCGAGAAAG+AGG | + | chr2_2:70318736-70318755 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | - | chr2_2:70318742-70318761 | Msa0268590:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | - | chr2_2:70318765-70318784 | Msa0268590:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | + | chr2_2:70318783-70318802 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | + | chr2_2:70318791-70318810 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | - | chr2_2:70319153-70319172 | Msa0268590:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | - | chr2_2:70319255-70319274 | Msa0268590:CDS | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | - | chr2_2:70319257-70319276 | Msa0268590:CDS | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | + | chr2_2:70319325-70319344 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | - | chr2_2:70319534-70319553 | Msa0268590:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | + | chr2_2:70319635-70319654 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | + | chr2_2:70319636-70319655 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | - | chr2_2:70319996-70320015 | Msa0268590:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | - | chr2_2:70320008-70320027 | Msa0268590:CDS | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | - | chr2_2:70320025-70320044 | Msa0268590:CDS | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | + | chr2_2:70320164-70320183 | None:intergenic | 50.0% |
| TTGGGTCCTGGAGGATTGAC+GGG | - | chr2_2:70318259-70318278 | Msa0268590:CDS | 55.0% | |
| !!! | CGGGGCGAACTGCTAGTTTT+CGG | - | chr2_2:70318278-70318297 | Msa0268590:CDS | 55.0% |
| !! | CACGCAAGGATTGGTCCTTG+GGG | - | chr2_2:70318394-70318413 | Msa0268590:CDS | 55.0% |
| !! | ACGCAAGGATTGGTCCTTGG+GGG | - | chr2_2:70318395-70318414 | Msa0268590:CDS | 55.0% |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | - | chr2_2:70318778-70318797 | Msa0268590:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | + | chr2_2:70318809-70318828 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | - | chr2_2:70318988-70319007 | Msa0268590:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | - | chr2_2:70318991-70319010 | Msa0268590:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | - | chr2_2:70319005-70319024 | Msa0268590:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | - | chr2_2:70319006-70319025 | Msa0268590:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | - | chr2_2:70319525-70319544 | Msa0268590:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | + | chr2_2:70319832-70319851 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | - | chr2_2:70320003-70320022 | Msa0268590:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | - | chr2_2:70320004-70320023 | Msa0268590:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | - | chr2_2:70320016-70320035 | Msa0268590:CDS | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | - | chr2_2:70320019-70320038 | Msa0268590:CDS | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | - | chr2_2:70320024-70320043 | Msa0268590:CDS | 55.0% | |
| TGGGTCCTGGAGGATTGACG+GGG | - | chr2_2:70318260-70318279 | Msa0268590:CDS | 60.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | + | chr2_2:70318808-70318827 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | + | chr2_2:70319408-70319427 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | + | chr2_2:70319831-70319850 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | - | chr2_2:70319828-70319847 | Msa0268590:CDS | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | - | chr2_2:70320034-70320053 | Msa0268590:CDS | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | - | chr2_2:70320035-70320054 | Msa0268590:CDS | 60.0% | |
| GTTCGCCCCGTCAATCCTCC+AGG | + | chr2_2:70318268-70318287 | None:intergenic | 65.0% | |
| CCCGCTATAGCCGAACACGC+AGG | - | chr2_2:70318805-70318824 | Msa0268590:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | - | chr2_2:70320036-70320055 | Msa0268590:CDS | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | - | chr2_2:70320041-70320060 | Msa0268590:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 70317059 | 70320286 | 70317059 | ID=Msa0268590;Name=Msa0268590 |
| chr2_2 | mRNA | 70317059 | 70320286 | 70317059 | ID=Msa0268590-mRNA-1;Parent=Msa0268590;Name=Msa0268590-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|1075 |
| chr2_2 | exon | 70317059 | 70320286 | 70317059 | ID=Msa0268590-mRNA-1:exon:22580;Parent=Msa0268590-mRNA-1 |
| chr2_2 | CDS | 70317059 | 70320286 | 70317059 | ID=Msa0268590-mRNA-1:cds;Parent=Msa0268590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
