Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416600 | sp|Q9C9C0|SPPA1_ARATH | 39.965 | 568 | 280 | 13 | 22 | 531 | 32 | 596 | 6.16e-126 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416600 | A0A2Z6LLX4 | 49.807 | 518 | 203 | 10 | 73 | 535 | 58 | 573 | 1.48e-157 | 476 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1406450 | Msa1416600 | 0.900696 | 5.655870e-78 | -8.615850e-47 |
| Msa1406460 | Msa1416600 | 0.989244 | 2.699124e-177 | -8.615850e-47 |
| Msa1416540 | Msa1416600 | 0.926390 | 5.006183e-91 | -8.615850e-47 |
| Msa1416590 | Msa1416600 | 0.909459 | 5.565102e-82 | -8.615850e-47 |
| Msa1334140 | Msa1416600 | 0.900368 | 7.859035e-78 | -8.615850e-47 |
| Msa1334180 | Msa1416600 | 0.908575 | 1.471344e-81 | -8.615850e-47 |
| Msa1334250 | Msa1416600 | 0.842682 | 2.227883e-58 | -8.615850e-47 |
| Msa1222490 | Msa1416600 | 0.928674 | 2.065965e-92 | -8.615850e-47 |
| Msa1222610 | Msa1416600 | 0.825698 | 4.068431e-54 | -8.615850e-47 |
| Msa1222620 | Msa1416600 | 0.854086 | 1.555600e-61 | -8.615850e-47 |
| Msa1222640 | Msa1416600 | 0.912494 | 1.826408e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416600 | MtrunA17_Chr4g0061881 | 49.807 | 518 | 203 | 9 | 74 | 535 | 66 | 582 | 2.13e-160 | 474 |
| Msa1416600 | MtrunA17_Chr2g0307851 | 45.508 | 512 | 223 | 9 | 79 | 535 | 84 | 594 | 3.21e-143 | 430 |
| Msa1416600 | MtrunA17_Chr4g0073611 | 48.529 | 272 | 134 | 3 | 149 | 416 | 2 | 271 | 7.67e-84 | 264 |
| Msa1416600 | MtrunA17_Chr5g0437391 | 39.053 | 338 | 140 | 9 | 197 | 513 | 8 | 300 | 2.23e-63 | 212 |
| Msa1416600 | MtrunA17_Chr5g0408331 | 39.118 | 340 | 137 | 10 | 76 | 404 | 32 | 312 | 6.88e-63 | 210 |
| Msa1416600 | MtrunA17_Chr4g0069071 | 36.207 | 348 | 185 | 8 | 130 | 445 | 5 | 347 | 1.12e-51 | 182 |
| Msa1416600 | MtrunA17_Chr4g0061841 | 35.000 | 300 | 89 | 6 | 148 | 417 | 8 | 231 | 1.87e-43 | 155 |
| Msa1416600 | MtrunA17_Chr8g0344851 | 47.134 | 157 | 74 | 3 | 386 | 533 | 1 | 157 | 1.43e-38 | 140 |
| Msa1416600 | MtrunA17_Chr4g0064001 | 52.756 | 127 | 60 | 0 | 409 | 535 | 2 | 128 | 3.80e-36 | 135 |
| Msa1416600 | MtrunA17_Chr4g0076561 | 42.929 | 198 | 99 | 5 | 303 | 499 | 2 | 186 | 6.23e-36 | 133 |
| Msa1416600 | MtrunA17_Chr4g0076571 | 61.728 | 81 | 31 | 0 | 144 | 224 | 1 | 81 | 1.71e-26 | 103 |
| Msa1416600 | MtrunA17_Chr4g0061831 | 67.143 | 70 | 23 | 0 | 469 | 538 | 44 | 113 | 3.13e-25 | 100 |
| Msa1416600 | MtrunA17_Chr5g0437441 | 51.961 | 102 | 43 | 3 | 104 | 202 | 4 | 102 | 1.93e-24 | 98.2 |
| Msa1416600 | MtrunA17_Chr8g0344821 | 66.667 | 63 | 21 | 0 | 473 | 535 | 38 | 100 | 2.09e-21 | 89.7 |
| Msa1416600 | MtrunA17_Chr8g0344831 | 44.828 | 116 | 62 | 2 | 296 | 410 | 7 | 121 | 1.45e-20 | 87.8 |
| Msa1416600 | MtrunA17_Chr4g0073621 | 73.077 | 52 | 12 | 1 | 486 | 535 | 1 | 52 | 1.17e-16 | 75.1 |
| Msa1416600 | MtrunA17_Chr5g0437451 | 56.923 | 65 | 25 | 1 | 474 | 535 | 81 | 145 | 4.80e-16 | 75.9 |
| Msa1416600 | MtrunA17_Chr4g0069081 | 51.613 | 62 | 30 | 0 | 473 | 534 | 8 | 69 | 6.89e-15 | 71.2 |
| Msa1416600 | MtrunA17_Chr5g0408341 | 64.444 | 45 | 16 | 0 | 491 | 535 | 1 | 45 | 2.64e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416600 | AT1G73990.1 | 39.965 | 568 | 280 | 13 | 22 | 531 | 32 | 596 | 6.26e-127 | 389 |
| Msa1416600 | AT1G73990.2 | 37.879 | 528 | 261 | 14 | 22 | 488 | 32 | 553 | 1.98e-103 | 325 |
Find 133 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAGATTCCTTGGTTTAAA+AGG | 0.176058 | tig0024372:-59596 | None:intergenic |
| TTTGATTTCGTCCCGCATTC+TGG | 0.209844 | tig0024372:+59039 | Msa1416600:CDS |
| TTGTGAATGTGAGGGGTTTC+GGG | 0.245290 | tig0024372:-58868 | None:intergenic |
| AATTCAAGGCACTTATTATA+CGG | 0.250692 | tig0024372:+59880 | Msa1416600:CDS |
| TTTGTGAATGTGAGGGGTTT+CGG | 0.257624 | tig0024372:-58869 | None:intergenic |
| TTGGTATAAGTACCCATTTC+CGG | 0.263741 | tig0024372:-61328 | None:intergenic |
| AATCTCTAAAATTGACAAAA+TGG | 0.271316 | tig0024372:-59716 | None:intergenic |
| GTCAATGACAATAAAGAATA+TGG | 0.271451 | tig0024372:+60238 | Msa1416600:CDS |
| ATTGCTATCATTCGCGTGTC+TGG | 0.277060 | tig0024372:+59792 | Msa1416600:CDS |
| AGTGCTTCTGTTTGTTTGTT+TGG | 0.278755 | tig0024372:+59423 | Msa1416600:CDS |
| CCATTGGTTGATGTGCATTC+AGG | 0.286389 | tig0024372:+61392 | Msa1416600:exon |
| ATTGTACTTGTTTGAATTGA+TGG | 0.297339 | tig0024372:-59817 | None:intergenic |
| TGGATGATTTAGGAGAAATT+TGG | 0.298537 | tig0024372:+60585 | Msa1416600:intron |
| CATGGGTTAGTTGATGCTAT+TGG | 0.311818 | tig0024372:+60308 | Msa1416600:CDS |
| AACAGCTCCTTCTTCCAATC+AGG | 0.317463 | tig0024372:-61352 | None:intergenic |
| CGTAGTGCTTACAAACATTA+GGG | 0.322089 | tig0024372:-59470 | None:intergenic |
| CAATTGCACAAGGGAAAGTT+TGG | 0.326756 | tig0024372:+60264 | Msa1416600:CDS |
| TTTAGAGATTATTCTTTAGT+TGG | 0.348620 | tig0024372:+59729 | Msa1416600:CDS |
| AACTGGACAAAGCCCGGAAA+TGG | 0.348893 | tig0024372:+61315 | Msa1416600:CDS |
| GGGTCAATTGGTGTGGCATC+AGG | 0.355686 | tig0024372:+60074 | Msa1416600:CDS |
| TGAGGCAGTGACTGCACTCC+TGG | 0.364724 | tig0024372:+59503 | Msa1416600:CDS |
| ACCAGTTGGCACTGACTCTA+AGG | 0.365682 | tig0024372:+59164 | Msa1416600:CDS |
| ATGAGAAGCTGCGTCCTTAC+CGG | 0.370022 | tig0024372:-60288 | None:intergenic |
| CCTGACTGACATATTGTATC+AGG | 0.371000 | tig0024372:+59647 | Msa1416600:CDS |
| TATTATACGGATTGATTGTC+CGG | 0.372786 | tig0024372:+59893 | Msa1416600:CDS |
| TCGTAGTGCTTACAAACATT+AGG | 0.380712 | tig0024372:-59471 | None:intergenic |
| TGGTATAAGTACCCATTTCC+GGG | 0.381711 | tig0024372:-61327 | None:intergenic |
| TCTTCTTCCACTTCAGGTAA+TGG | 0.382352 | tig0024372:+58988 | Msa1416600:CDS |
| TCTTTGTCTGATGTTGCAAC+TGG | 0.395783 | tig0024372:+59990 | Msa1416600:CDS |
| CTGACTGTCTTGAGGTATCT+TGG | 0.396709 | tig0024372:-60369 | None:intergenic |
| TTCGCCAGTGACACAAGCTT+TGG | 0.398734 | tig0024372:-60137 | None:intergenic |
| CGTTCCAAAGCTTGTGTCAC+TGG | 0.410749 | tig0024372:+60133 | Msa1416600:CDS |
| CTTATCAGAACACAACAAAC+TGG | 0.418408 | tig0024372:+61298 | Msa1416600:CDS |
| AATTTGGCAACAATAATTCA+TGG | 0.421068 | tig0024372:+60601 | Msa1416600:CDS |
| GATGTGCATTCAGGAATAAC+AGG | 0.437794 | tig0024372:+61401 | Msa1416600:exon |
| TCCTTTGATATAAATTATCA+AGG | 0.441370 | tig0024372:-60106 | None:intergenic |
| GGAGGATACTACATAGCAAT+TGG | 0.443601 | tig0024372:+60014 | Msa1416600:CDS |
| GTAAAACAACAGTCCTTTGA+AGG | 0.445649 | tig0024372:-61276 | None:intergenic |
| TTGTCTGATGTTGCAACTGG+TGG | 0.446639 | tig0024372:+59993 | Msa1416600:CDS |
| GATCAAATGCGGCTTTCATA+AGG | 0.449687 | tig0024372:-59215 | None:intergenic |
| TGGATCATGTCTATTCCAAC+TGG | 0.452166 | tig0024372:+59523 | Msa1416600:CDS |
| TCAGACAAAGAAGCAACTAC+TGG | 0.468182 | tig0024372:-59978 | None:intergenic |
| TGTGTACTAGATAGATTCCT+TGG | 0.469219 | tig0024372:-59605 | None:intergenic |
| AACACGGTCCACAATGGAAA+TGG | 0.473603 | tig0024372:-58920 | None:intergenic |
| CTTCCAAGCAGGTGAAGACC+TGG | 0.477422 | tig0024372:-59671 | None:intergenic |
| TAGTGTGCGGTAGAATTTGA+GGG | 0.478545 | tig0024372:-58893 | None:intergenic |
| GACGAAATCAAACTCACCCT+TGG | 0.479725 | tig0024372:-59028 | None:intergenic |
| ACCTTAGAGTCAGTGCCAAC+TGG | 0.479839 | tig0024372:-59165 | None:intergenic |
| TTGCTATCATTCGCGTGTCT+GGG | 0.480681 | tig0024372:+59793 | Msa1416600:CDS |
| ACCGTTACCATTACCTGAAG+TGG | 0.483377 | tig0024372:-58995 | None:intergenic |
| ACCTTGATAATTTATATCAA+AGG | 0.487316 | tig0024372:+60105 | Msa1416600:CDS |
| CCTGATACAATATGTCAGTC+AGG | 0.487980 | tig0024372:-59647 | None:intergenic |
| ACAACAAACTGGACAAAGCC+CGG | 0.491518 | tig0024372:+61309 | Msa1416600:CDS |
| CTTCAAGAAATTTATTGTGA+AGG | 0.493765 | tig0024372:+59062 | Msa1416600:CDS |
| ACTGGACAAAGCCCGGAAAT+GGG | 0.496394 | tig0024372:+61316 | Msa1416600:CDS |
| TATAGCTATTGCAAAACTGC+AGG | 0.501094 | tig0024372:+60346 | Msa1416600:CDS |
| GGTAAGGACGCAGCTTCTCA+TGG | 0.501365 | tig0024372:+60290 | Msa1416600:CDS |
| TCTAAAATTGACAAAATGGA+TGG | 0.504099 | tig0024372:-59712 | None:intergenic |
| GTACTTATACCAACCCTGAT+TGG | 0.505029 | tig0024372:+61338 | Msa1416600:CDS |
| TCTAGTACACAAACTTAAAG+AGG | 0.505294 | tig0024372:+59617 | Msa1416600:CDS |
| TTAGTTGGAAAATCAACTGT+AGG | 0.505437 | tig0024372:+59744 | Msa1416600:CDS |
| CAAGATACCTCAAGACAGTC+AGG | 0.506343 | tig0024372:+60370 | Msa1416600:CDS |
| GGACCAGGTCTTCACCTGCT+TGG | 0.507013 | tig0024372:+59668 | Msa1416600:CDS |
| ATAGTGTGCGGTAGAATTTG+AGG | 0.507587 | tig0024372:-58894 | None:intergenic |
| GATCAAATTTGTTGTTCTAG+AGG | 0.512507 | tig0024372:+59549 | Msa1416600:CDS |
| AAACAAACAGAAGCACTTGA+AGG | 0.514691 | tig0024372:-59417 | None:intergenic |
| CAATTGACCCAGTAAAAGAA+AGG | 0.524155 | tig0024372:-60061 | None:intergenic |
| TCTGATGTTGCAACTGGTGG+AGG | 0.524370 | tig0024372:+59996 | Msa1416600:CDS |
| CTCCTTCTTCCAATCAGGGT+TGG | 0.525262 | tig0024372:-61347 | None:intergenic |
| GGGTTAGTTGATGCTATTGG+CGG | 0.525269 | tig0024372:+60311 | Msa1416600:CDS |
| ATTTCTTGAAGCCAGAATGC+GGG | 0.525455 | tig0024372:-59050 | None:intergenic |
| TCAACATCAGTGTACTCCAT+TGG | 0.529318 | tig0024372:+61376 | Msa1416600:CDS |
| ACGAAATCAAACTCACCCTT+GGG | 0.529474 | tig0024372:-59027 | None:intergenic |
| TTACAAGGAAATATTTCCGA+TGG | 0.530898 | tig0024372:+59141 | Msa1416600:CDS |
| ATTTGGCAACAATAATTCAT+GGG | 0.533369 | tig0024372:+60602 | Msa1416600:CDS |
| GTCAGTGCCAACTGGTCCAT+CGG | 0.538824 | tig0024372:-59157 | None:intergenic |
| ACTATCTTCCATTTCCATTG+TGG | 0.545148 | tig0024372:+58912 | Msa1416600:CDS |
| GTTGTTTGAGATGAAGATGA+AGG | 0.549690 | tig0024372:-58824 | None:intergenic |
| GCCTCGGAGCATGTGGAACA+TGG | 0.549933 | tig0024372:+59099 | Msa1416600:CDS |
| ACAAATTTGATCCAACCAGT+TGG | 0.551473 | tig0024372:-59538 | None:intergenic |
| ACTAACGTTGGTTCTTGAGT+AGG | 0.554396 | tig0024372:-58958 | None:intergenic |
| TCATGTCTATTCCAACTGGT+TGG | 0.556000 | tig0024372:+59527 | Msa1416600:CDS |
| TCCACTTCAGGTAATGGTAA+CGG | 0.563991 | tig0024372:+58994 | Msa1416600:CDS |
| TCTGTTAGCCTCGGAGCATG+TGG | 0.564327 | tig0024372:+59092 | Msa1416600:CDS |
| CAGACAAAGAAGCAACTACT+GGG | 0.565420 | tig0024372:-59977 | None:intergenic |
| GGTCAATTGGTGTGGCATCA+GGG | 0.569385 | tig0024372:+60075 | Msa1416600:CDS |
| TACCAACCCTGATTGGAAGA+AGG | 0.572792 | tig0024372:+61345 | Msa1416600:CDS |
| GGGGTTTCGGGAAGATGAAG+AGG | 0.574598 | tig0024372:-58856 | None:intergenic |
| TTCAGGAATAACAGGAGGGA+TGG | 0.577523 | tig0024372:+61409 | Msa1416600:three_prime_UTR |
| ATATTGAGAATCAATTTACA+AGG | 0.578147 | tig0024372:+59126 | Msa1416600:CDS |
| TCCGCTGTGTTTCTTTACAT+AGG | 0.579171 | tig0024372:+59246 | Msa1416600:CDS |
| TGAGGGATTTGTGAATGTGA+GGG | 0.580001 | tig0024372:-58876 | None:intergenic |
| GTAAGGACGCAGCTTCTCAT+GGG | 0.580359 | tig0024372:+60291 | Msa1416600:CDS |
| AGGGAAAGTTTGGACCGGTA+AGG | 0.580820 | tig0024372:+60274 | Msa1416600:CDS |
| GTCGTCTATCTGAATTAATG+TGG | 0.582403 | tig0024372:+59925 | Msa1416600:CDS |
| GTACACAAACTTAAAGAGGA+GGG | 0.582498 | tig0024372:+59621 | Msa1416600:CDS |
| ACAGCTCCTTCTTCCAATCA+GGG | 0.583747 | tig0024372:-61351 | None:intergenic |
| TGGATGTTGTATGCCTTCAA+AGG | 0.592887 | tig0024372:+61263 | Msa1416600:CDS |
| AGTTGGAATAGACATGATCC+AGG | 0.594385 | tig0024372:-59521 | None:intergenic |
| GATAGACGACAAGACCCTCC+CGG | 0.596316 | tig0024372:-59912 | None:intergenic |
| GGTTAAGACTCTGTTAGCCT+CGG | 0.596334 | tig0024372:+59083 | Msa1416600:CDS |
| AATATTTCCGATGGACCAGT+TGG | 0.597583 | tig0024372:+59150 | Msa1416600:CDS |
| TACGGATTGATTGTCCGGGA+GGG | 0.601418 | tig0024372:+59898 | Msa1416600:CDS |
| TTGAGGGATTTGTGAATGTG+AGG | 0.606072 | tig0024372:-58877 | None:intergenic |
| GCACAAGGGAAAGTTTGGAC+CGG | 0.606671 | tig0024372:+60269 | Msa1416600:CDS |
| GAGGGATTTGTGAATGTGAG+GGG | 0.607039 | tig0024372:-58875 | None:intergenic |
| ATTATACGGATTGATTGTCC+GGG | 0.607923 | tig0024372:+59894 | Msa1416600:CDS |
| GGTTAGTTGATGCTATTGGC+GGG | 0.616077 | tig0024372:+60312 | Msa1416600:CDS |
| TACACAAACTTAAAGAGGAG+GGG | 0.616915 | tig0024372:+59622 | Msa1416600:CDS |
| AATTTCTTGAAGCCAGAATG+CGG | 0.621440 | tig0024372:-59051 | None:intergenic |
| TGCTGCAACACGGTCCACAA+TGG | 0.622831 | tig0024372:-58926 | None:intergenic |
| AGTACACAAACTTAAAGAGG+AGG | 0.624938 | tig0024372:+59620 | Msa1416600:CDS |
| GAAGATGAAAACACTAACGT+TGG | 0.631994 | tig0024372:-58970 | None:intergenic |
| TGACATATTGTATCAGGACC+AGG | 0.643786 | tig0024372:+59653 | Msa1416600:CDS |
| GTGCATTCAGGAATAACAGG+AGG | 0.649237 | tig0024372:+61404 | Msa1416600:three_prime_UTR |
| CCTGAATGCACATCAACCAA+TGG | 0.649333 | tig0024372:-61392 | None:intergenic |
| GTAGTGCTTACAAACATTAG+GGG | 0.660253 | tig0024372:-59469 | None:intergenic |
| AATATGGAATCAATTGCACA+AGG | 0.663725 | tig0024372:+60254 | Msa1416600:CDS |
| GGAGTGCAGTCACTGCCTCA+CGG | 0.663983 | tig0024372:-59500 | None:intergenic |
| AGCGTAACCTGACTGTCTTG+AGG | 0.664382 | tig0024372:-60377 | None:intergenic |
| AGAAACACAGCGGACACACG+AGG | 0.667158 | tig0024372:-59237 | None:intergenic |
| TGCATTCAGGAATAACAGGA+GGG | 0.668569 | tig0024372:+61405 | Msa1416600:three_prime_UTR |
| TTTCGGGAAGATGAAGAGGA+TGG | 0.668798 | tig0024372:-58852 | None:intergenic |
| ATATATTGCTCATGTGTCGT+AGG | 0.670620 | tig0024372:-60185 | None:intergenic |
| TAGTGCTTACAAACATTAGG+GGG | 0.677292 | tig0024372:-59468 | None:intergenic |
| GAAGTAAAGATGCTGCAACA+CGG | 0.695209 | tig0024372:-58936 | None:intergenic |
| ATATGGAATCAATTGCACAA+GGG | 0.697277 | tig0024372:+60255 | Msa1416600:CDS |
| TCCATGTTCCACATGCTCCG+AGG | 0.700945 | tig0024372:-59100 | None:intergenic |
| TGGAAATGGAAGATAGTGTG+CGG | 0.715103 | tig0024372:-58906 | None:intergenic |
| TAATGTTTGTAAGCACTACG+AGG | 0.742944 | tig0024372:+59473 | Msa1416600:CDS |
| GGACACACGAGGATCAAATG+CGG | 0.763717 | tig0024372:-59226 | None:intergenic |
| ACCTATGTAAAGAAACACAG+CGG | 0.782898 | tig0024372:-59247 | None:intergenic |
| GCACTACGAGGATAGCCGTG+AGG | 0.785191 | tig0024372:+59485 | Msa1416600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATCAAATTTTAAAAAATC+TGG | + | tig0024372:59315-59334 | Msa1416600:CDS | 10.0% |
| !! | ATATTGAGAATCAATTTACA+AGG | + | tig0024372:59126-59145 | Msa1416600:CDS | 20.0% |
| !!! | AATCTCTAAAATTGACAAAA+TGG | - | tig0024372:59719-59738 | None:intergenic | 20.0% |
| !! | TTTAGAGATTATTCTTTAGT+TGG | + | tig0024372:59729-59748 | Msa1416600:CDS | 20.0% |
| !!! | ACCTTGATAATTTATATCAA+AGG | + | tig0024372:60105-60124 | Msa1416600:CDS | 20.0% |
| !! | TCCTTTGATATAAATTATCA+AGG | - | tig0024372:60109-60128 | None:intergenic | 20.0% |
| !! | GTTAATTACTTATTTCGTTA+TGG | + | tig0024372:60737-60756 | Msa1416600:intron | 20.0% |
| !!! | GTTTCTAAATTTTAGACTTA+TGG | + | tig0024372:61211-61230 | Msa1416600:intron | 20.0% |
| ! | CTTCAAGAAATTTATTGTGA+AGG | + | tig0024372:59062-59081 | Msa1416600:CDS | 25.0% |
| !! | TACATAGGTGATTTTTATTG+TGG | + | tig0024372:59261-59280 | Msa1416600:CDS | 25.0% |
| !! | TATGTTTTCGGTACAATTAA+AGG | - | tig0024372:59363-59382 | None:intergenic | 25.0% |
| !! | CTAGCAATGTAATATGTTTT+CGG | - | tig0024372:59375-59394 | None:intergenic | 25.0% |
| !! | TCTAAAATTGACAAAATGGA+TGG | - | tig0024372:59715-59734 | None:intergenic | 25.0% |
| ! | ATTGTACTTGTTTGAATTGA+TGG | - | tig0024372:59820-59839 | None:intergenic | 25.0% |
| ! | CATGATGTCAAAAAAATTCA+AGG | + | tig0024372:59866-59885 | Msa1416600:CDS | 25.0% |
| !! | AATTCAAGGCACTTATTATA+CGG | + | tig0024372:59880-59899 | Msa1416600:CDS | 25.0% |
| ! | GTCAATGACAATAAAGAATA+TGG | + | tig0024372:60238-60257 | Msa1416600:CDS | 25.0% |
| ! | CATTAACATAATCATAGAGT+AGG | - | tig0024372:60554-60573 | None:intergenic | 25.0% |
| ! | AATTTGGCAACAATAATTCA+TGG | + | tig0024372:60601-60620 | Msa1416600:CDS | 25.0% |
| ! | ATTTGGCAACAATAATTCAT+GGG | + | tig0024372:60602-60621 | Msa1416600:CDS | 25.0% |
| ! | GTGTCATACAAAAATTCAAT+TGG | - | tig0024372:60688-60707 | None:intergenic | 25.0% |
| ! | AAAAACATAGAAGTCAAAAC+AGG | - | tig0024372:60768-60787 | None:intergenic | 25.0% |
| !!! | TTACCAGTAATTTTTTTGCT+AGG | + | tig0024372:61092-61111 | Msa1416600:intron | 25.0% |
| ! | AATCCTAGCAAAAAAATTAC+TGG | - | tig0024372:61098-61117 | None:intergenic | 25.0% |
| !!! | AGTAATTTTTTTGCTAGGAT+TGG | + | tig0024372:61097-61116 | Msa1416600:intron | 25.0% |
| !!! | AATTTTCTAAAATCAAGGAC+TGG | - | tig0024372:61147-61166 | None:intergenic | 25.0% |
| !!! | AGTCCTTGATTTTAGAAAAT+TGG | + | tig0024372:61146-61165 | Msa1416600:intron | 25.0% |
| !!! | GAACCAATTTTCTAAAATCA+AGG | - | tig0024372:61152-61171 | None:intergenic | 25.0% |
| ! | AAAATTTAGAAACCAGAAAC+CGG | - | tig0024372:61204-61223 | None:intergenic | 25.0% |
| ! | CTGCAGAAAAAAAAAACAAA+TGG | - | tig0024372:61241-61260 | None:intergenic | 25.0% |
| TTACAAGGAAATATTTCCGA+TGG | + | tig0024372:59141-59160 | Msa1416600:CDS | 30.0% | |
| ! | TAGGTGATTTTTATTGTGGT+TGG | + | tig0024372:59265-59284 | Msa1416600:CDS | 30.0% |
| ! | AGGTGATTTTTATTGTGGTT+GGG | + | tig0024372:59266-59285 | Msa1416600:CDS | 30.0% |
| !! | GATCAAATTTGTTGTTCTAG+AGG | + | tig0024372:59549-59568 | Msa1416600:CDS | 30.0% |
| ! | GTTGAAAACCTTTTAAACCA+AGG | + | tig0024372:59588-59607 | Msa1416600:CDS | 30.0% |
| GATAGATTCCTTGGTTTAAA+AGG | - | tig0024372:59599-59618 | None:intergenic | 30.0% | |
| TCTAGTACACAAACTTAAAG+AGG | + | tig0024372:59617-59636 | Msa1416600:CDS | 30.0% | |
| TTAGTTGGAAAATCAACTGT+AGG | + | tig0024372:59744-59763 | Msa1416600:CDS | 30.0% | |
| ! | TATTATACGGATTGATTGTC+CGG | + | tig0024372:59893-59912 | Msa1416600:CDS | 30.0% |
| ! | TCTGAAAACCTTTCTTTTAC+TGG | + | tig0024372:60053-60072 | Msa1416600:CDS | 30.0% |
| ! | CTGAAAACCTTTCTTTTACT+GGG | + | tig0024372:60054-60073 | Msa1416600:CDS | 30.0% |
| AATATGGAATCAATTGCACA+AGG | + | tig0024372:60254-60273 | Msa1416600:CDS | 30.0% | |
| ATATGGAATCAATTGCACAA+GGG | + | tig0024372:60255-60274 | Msa1416600:CDS | 30.0% | |
| TGATAAGTTGTACTGAAAAC+TGG | + | tig0024372:60518-60537 | Msa1416600:intron | 30.0% | |
| GATAAGTTGTACTGAAAACT+GGG | + | tig0024372:60519-60538 | Msa1416600:intron | 30.0% | |
| TGATTATGTTAATGAGCTTG+AGG | + | tig0024372:60560-60579 | Msa1416600:intron | 30.0% | |
| TGGATGATTTAGGAGAAATT+TGG | + | tig0024372:60585-60604 | Msa1416600:intron | 30.0% | |
| ! | TTTTATGCTCAACTTGTACA+TGG | + | tig0024372:60785-60804 | Msa1416600:intron | 30.0% |
| TCTCGTATTAAAATACCACA+CGG | + | tig0024372:60864-60883 | Msa1416600:intron | 30.0% | |
| ! | AAATTTTACGTTATACCGTG+TGG | - | tig0024372:60882-60901 | None:intergenic | 30.0% |
| AATGATATTGTCAACCTTCA+TGG | - | tig0024372:60929-60948 | None:intergenic | 30.0% | |
| ! | GCATTGACACTTAAATTGAA+TGG | - | tig0024372:61027-61046 | None:intergenic | 30.0% |
| ! | ACTGTTTGATGTATTTCTGT+CGG | + | tig0024372:61175-61194 | Msa1416600:intron | 30.0% |
| !!! | TGTTTTTTTTTTCTGCAGTC+TGG | + | tig0024372:61243-61262 | Msa1416600:intron | 30.0% |
| ! | GTTGTTTGAGATGAAGATGA+AGG | - | tig0024372:58827-58846 | None:intergenic | 35.0% |
| ACTATCTTCCATTTCCATTG+TGG | + | tig0024372:58912-58931 | Msa1416600:CDS | 35.0% | |
| GAAGATGAAAACACTAACGT+TGG | - | tig0024372:58973-58992 | None:intergenic | 35.0% | |
| ! | TTTTCATCTTCTTCCACTTC+AGG | + | tig0024372:58982-59001 | Msa1416600:CDS | 35.0% |
| AATTTCTTGAAGCCAGAATG+CGG | - | tig0024372:59054-59073 | None:intergenic | 35.0% | |
| ! | ATAAGGTTTTCACTTAGCTG+AGG | - | tig0024372:59201-59220 | None:intergenic | 35.0% |
| ACCTATGTAAAGAAACACAG+CGG | - | tig0024372:59250-59269 | None:intergenic | 35.0% | |
| !! | AAACAAACAGAAGCACTTGA+AGG | - | tig0024372:59420-59439 | None:intergenic | 35.0% |
| AGTGCTTCTGTTTGTTTGTT+TGG | + | tig0024372:59423-59442 | Msa1416600:CDS | 35.0% | |
| TAGTGCTTACAAACATTAGG+GGG | - | tig0024372:59471-59490 | None:intergenic | 35.0% | |
| GTAGTGCTTACAAACATTAG+GGG | - | tig0024372:59472-59491 | None:intergenic | 35.0% | |
| CGTAGTGCTTACAAACATTA+GGG | - | tig0024372:59473-59492 | None:intergenic | 35.0% | |
| TCGTAGTGCTTACAAACATT+AGG | - | tig0024372:59474-59493 | None:intergenic | 35.0% | |
| TAATGTTTGTAAGCACTACG+AGG | + | tig0024372:59473-59492 | Msa1416600:CDS | 35.0% | |
| ACAAATTTGATCCAACCAGT+TGG | - | tig0024372:59541-59560 | None:intergenic | 35.0% | |
| TGTGTACTAGATAGATTCCT+TGG | - | tig0024372:59608-59627 | None:intergenic | 35.0% | |
| AGTACACAAACTTAAAGAGG+AGG | + | tig0024372:59620-59639 | Msa1416600:CDS | 35.0% | |
| GTACACAAACTTAAAGAGGA+GGG | + | tig0024372:59621-59640 | Msa1416600:CDS | 35.0% | |
| TACACAAACTTAAAGAGGAG+GGG | + | tig0024372:59622-59641 | Msa1416600:CDS | 35.0% | |
| ACCTGCTTGGAAGAAAAATT+GGG | + | tig0024372:59681-59700 | Msa1416600:CDS | 35.0% | |
| ! | ATTATACGGATTGATTGTCC+GGG | + | tig0024372:59894-59913 | Msa1416600:CDS | 35.0% |
| GTCGTCTATCTGAATTAATG+TGG | + | tig0024372:59925-59944 | Msa1416600:CDS | 35.0% | |
| CAATTGACCCAGTAAAAGAA+AGG | - | tig0024372:60064-60083 | None:intergenic | 35.0% | |
| ! | CTTTCTTTTACTGGGTCAAT+TGG | + | tig0024372:60062-60081 | Msa1416600:CDS | 35.0% |
| ATATATTGCTCATGTGTCGT+AGG | - | tig0024372:60188-60207 | None:intergenic | 35.0% | |
| !!! | GTAATAACGCAGCTTTTTCA+AGG | + | tig0024372:60216-60235 | Msa1416600:CDS | 35.0% |
| TATAGCTATTGCAAAACTGC+AGG | + | tig0024372:60346-60365 | Msa1416600:CDS | 35.0% | |
| ATGTTAATGAGCTTGAGGAT+TGG | + | tig0024372:60565-60584 | Msa1416600:intron | 35.0% | |
| CTGAGCTGTATCAATTAGTA+AGG | + | tig0024372:60649-60668 | Msa1416600:intron | 35.0% | |
| CATGGATAGTTAGGAATAGA+GGG | - | tig0024372:60911-60930 | None:intergenic | 35.0% | |
| TCATGGATAGTTAGGAATAG+AGG | - | tig0024372:60912-60931 | None:intergenic | 35.0% | |
| CTATTCCTAACTATCCATGA+AGG | + | tig0024372:60912-60931 | Msa1416600:intron | 35.0% | |
| GTAAAACAACAGTCCTTTGA+AGG | - | tig0024372:61279-61298 | None:intergenic | 35.0% | |
| CTTATCAGAACACAACAAAC+TGG | + | tig0024372:61298-61317 | Msa1416600:CDS | 35.0% | |
| TTGGTATAAGTACCCATTTC+CGG | - | tig0024372:61331-61350 | None:intergenic | 35.0% | |
| TTTGTGAATGTGAGGGGTTT+CGG | - | tig0024372:58872-58891 | None:intergenic | 40.0% | |
| TGAGGGATTTGTGAATGTGA+GGG | - | tig0024372:58879-58898 | None:intergenic | 40.0% | |
| TTGAGGGATTTGTGAATGTG+AGG | - | tig0024372:58880-58899 | None:intergenic | 40.0% | |
| TAGTGTGCGGTAGAATTTGA+GGG | - | tig0024372:58896-58915 | None:intergenic | 40.0% | |
| ATAGTGTGCGGTAGAATTTG+AGG | - | tig0024372:58897-58916 | None:intergenic | 40.0% | |
| TGGAAATGGAAGATAGTGTG+CGG | - | tig0024372:58909-58928 | None:intergenic | 40.0% | |
| GAAGTAAAGATGCTGCAACA+CGG | - | tig0024372:58939-58958 | None:intergenic | 40.0% | |
| !! | ACTAACGTTGGTTCTTGAGT+AGG | - | tig0024372:58961-58980 | None:intergenic | 40.0% |
| TCTTCTTCCACTTCAGGTAA+TGG | + | tig0024372:58988-59007 | Msa1416600:CDS | 40.0% | |
| ! | TCCACTTCAGGTAATGGTAA+CGG | + | tig0024372:58994-59013 | Msa1416600:CDS | 40.0% |
| !!! | TAACGGTGTTGATTTTCCCA+AGG | + | tig0024372:59011-59030 | Msa1416600:CDS | 40.0% |
| !!! | AACGGTGTTGATTTTCCCAA+GGG | + | tig0024372:59012-59031 | Msa1416600:CDS | 40.0% |
| ACGAAATCAAACTCACCCTT+GGG | - | tig0024372:59030-59049 | None:intergenic | 40.0% | |
| ATTTCTTGAAGCCAGAATGC+GGG | - | tig0024372:59053-59072 | None:intergenic | 40.0% | |
| AATATTTCCGATGGACCAGT+TGG | + | tig0024372:59150-59169 | Msa1416600:CDS | 40.0% | |
| GATCAAATGCGGCTTTCATA+AGG | - | tig0024372:59218-59237 | None:intergenic | 40.0% | |
| TCCGCTGTGTTTCTTTACAT+AGG | + | tig0024372:59246-59265 | Msa1416600:CDS | 40.0% | |
| AGTTGGAATAGACATGATCC+AGG | - | tig0024372:59524-59543 | None:intergenic | 40.0% | |
| TGGATCATGTCTATTCCAAC+TGG | + | tig0024372:59523-59542 | Msa1416600:CDS | 40.0% | |
| TCATGTCTATTCCAACTGGT+TGG | + | tig0024372:59527-59546 | Msa1416600:CDS | 40.0% | |
| CCTGATACAATATGTCAGTC+AGG | - | tig0024372:59650-59669 | None:intergenic | 40.0% | |
| CCTGACTGACATATTGTATC+AGG | + | tig0024372:59647-59666 | Msa1416600:CDS | 40.0% | |
| TGACATATTGTATCAGGACC+AGG | + | tig0024372:59653-59672 | Msa1416600:CDS | 40.0% | |
| CACCTGCTTGGAAGAAAAAT+TGG | + | tig0024372:59680-59699 | Msa1416600:CDS | 40.0% | |
| ! | ACCCAATTTTTCTTCCAAGC+AGG | - | tig0024372:59685-59704 | None:intergenic | 40.0% |
| !!! | GATTTTTGAAGCAACTGAGG+TGG | - | tig0024372:59958-59977 | None:intergenic | 40.0% |
| !!! | TGGGATTTTTGAAGCAACTG+AGG | - | tig0024372:59961-59980 | None:intergenic | 40.0% |
| CAGACAAAGAAGCAACTACT+GGG | - | tig0024372:59980-59999 | None:intergenic | 40.0% | |
| TCAGACAAAGAAGCAACTAC+TGG | - | tig0024372:59981-60000 | None:intergenic | 40.0% | |
| TCTTTGTCTGATGTTGCAAC+TGG | + | tig0024372:59990-60009 | Msa1416600:CDS | 40.0% | |
| GGAGGATACTACATAGCAAT+TGG | + | tig0024372:60014-60033 | Msa1416600:CDS | 40.0% | |
| ! | TTTTACTGGGTCAATTGGTG+TGG | + | tig0024372:60067-60086 | Msa1416600:CDS | 40.0% |
| CAATTGCACAAGGGAAAGTT+TGG | + | tig0024372:60264-60283 | Msa1416600:CDS | 40.0% | |
| !! | CATGGGTTAGTTGATGCTAT+TGG | + | tig0024372:60308-60327 | Msa1416600:CDS | 40.0% |
| ! | TTTTGCAATAGCTATAGCGC+AGG | - | tig0024372:60342-60361 | None:intergenic | 40.0% |
| GCTTGAGGATTGGATGATTT+AGG | + | tig0024372:60575-60594 | Msa1416600:intron | 40.0% | |
| GTCAACCTTCATGGATAGTT+AGG | - | tig0024372:60920-60939 | None:intergenic | 40.0% | |
| ! | GGACTGGCATTAGTAGTTTA+CGG | - | tig0024372:61131-61150 | None:intergenic | 40.0% |
| TGGATGTTGTATGCCTTCAA+AGG | + | tig0024372:61263-61282 | Msa1416600:CDS | 40.0% | |
| TGGTATAAGTACCCATTTCC+GGG | - | tig0024372:61330-61349 | None:intergenic | 40.0% | |
| GTACTTATACCAACCCTGAT+TGG | + | tig0024372:61338-61357 | Msa1416600:CDS | 40.0% | |
| TCAACATCAGTGTACTCCAT+TGG | + | tig0024372:61376-61395 | Msa1416600:CDS | 40.0% | |
| GATGTGCATTCAGGAATAAC+AGG | + | tig0024372:61401-61420 | Msa1416600:exon | 40.0% | |
| TGCATTCAGGAATAACAGGA+GGG | + | tig0024372:61405-61424 | Msa1416600:three_prime_UTR | 40.0% | |
| TTTCGGGAAGATGAAGAGGA+TGG | - | tig0024372:58855-58874 | None:intergenic | 45.0% | |
| TTGTGAATGTGAGGGGTTTC+GGG | - | tig0024372:58871-58890 | None:intergenic | 45.0% | |
| GAGGGATTTGTGAATGTGAG+GGG | - | tig0024372:58878-58897 | None:intergenic | 45.0% | |
| AACACGGTCCACAATGGAAA+TGG | - | tig0024372:58923-58942 | None:intergenic | 45.0% | |
| ACCGTTACCATTACCTGAAG+TGG | - | tig0024372:58998-59017 | None:intergenic | 45.0% | |
| GACGAAATCAAACTCACCCT+TGG | - | tig0024372:59031-59050 | None:intergenic | 45.0% | |
| ! | TTTGATTTCGTCCCGCATTC+TGG | + | tig0024372:59039-59058 | Msa1416600:CDS | 45.0% |
| ! | GGTTAAGACTCTGTTAGCCT+CGG | + | tig0024372:59083-59102 | Msa1416600:CDS | 45.0% |
| ATTGCTATCATTCGCGTGTC+TGG | + | tig0024372:59792-59811 | Msa1416600:CDS | 45.0% | |
| TTGCTATCATTCGCGTGTCT+GGG | + | tig0024372:59793-59812 | Msa1416600:CDS | 45.0% | |
| TTGTCTGATGTTGCAACTGG+TGG | + | tig0024372:59993-60012 | Msa1416600:CDS | 45.0% | |
| !! | GGGTTAGTTGATGCTATTGG+CGG | + | tig0024372:60311-60330 | Msa1416600:CDS | 45.0% |
| ! | GGTTAGTTGATGCTATTGGC+GGG | + | tig0024372:60312-60331 | Msa1416600:CDS | 45.0% |
| ! | CTGACTGTCTTGAGGTATCT+TGG | - | tig0024372:60372-60391 | None:intergenic | 45.0% |
| CAAGATACCTCAAGACAGTC+AGG | + | tig0024372:60370-60389 | Msa1416600:CDS | 45.0% | |
| AACTTCAGTCCCTGTGCTTA+AGG | + | tig0024372:61051-61070 | Msa1416600:intron | 45.0% | |
| !! | GATGTATTTCTGTCGGCTTC+CGG | + | tig0024372:61182-61201 | Msa1416600:intron | 45.0% |
| ACAACAAACTGGACAAAGCC+CGG | + | tig0024372:61309-61328 | Msa1416600:CDS | 45.0% | |
| TACCAACCCTGATTGGAAGA+AGG | + | tig0024372:61345-61364 | Msa1416600:CDS | 45.0% | |
| ACAGCTCCTTCTTCCAATCA+GGG | - | tig0024372:61354-61373 | None:intergenic | 45.0% | |
| AACAGCTCCTTCTTCCAATC+AGG | - | tig0024372:61355-61374 | None:intergenic | 45.0% | |
| CCTGAATGCACATCAACCAA+TGG | - | tig0024372:61395-61414 | None:intergenic | 45.0% | |
| ! | CCATTGGTTGATGTGCATTC+AGG | + | tig0024372:61392-61411 | Msa1416600:exon | 45.0% |
| GTGCATTCAGGAATAACAGG+AGG | + | tig0024372:61404-61423 | Msa1416600:three_prime_UTR | 45.0% | |
| TTCAGGAATAACAGGAGGGA+TGG | + | tig0024372:61409-61428 | Msa1416600:three_prime_UTR | 45.0% | |
| !! | ACCAGTTGGCACTGACTCTA+AGG | + | tig0024372:59164-59183 | Msa1416600:CDS | 50.0% |
| ACCTTAGAGTCAGTGCCAAC+TGG | - | tig0024372:59168-59187 | None:intergenic | 50.0% | |
| GGACACACGAGGATCAAATG+CGG | - | tig0024372:59229-59248 | None:intergenic | 50.0% | |
| ! | ATACGGATTGATTGTCCGGG+AGG | + | tig0024372:59897-59916 | Msa1416600:CDS | 50.0% |
| ! | TACGGATTGATTGTCCGGGA+GGG | + | tig0024372:59898-59917 | Msa1416600:CDS | 50.0% |
| TCTGATGTTGCAACTGGTGG+AGG | + | tig0024372:59996-60015 | Msa1416600:CDS | 50.0% | |
| GGTCAATTGGTGTGGCATCA+GGG | + | tig0024372:60075-60094 | Msa1416600:CDS | 50.0% | |
| CGTTCCAAAGCTTGTGTCAC+TGG | + | tig0024372:60133-60152 | Msa1416600:CDS | 50.0% | |
| TTCGCCAGTGACACAAGCTT+TGG | - | tig0024372:60140-60159 | None:intergenic | 50.0% | |
| GCACAAGGGAAAGTTTGGAC+CGG | + | tig0024372:60269-60288 | Msa1416600:CDS | 50.0% | |
| AGGGAAAGTTTGGACCGGTA+AGG | + | tig0024372:60274-60293 | Msa1416600:CDS | 50.0% | |
| ATGAGAAGCTGCGTCCTTAC+CGG | - | tig0024372:60291-60310 | None:intergenic | 50.0% | |
| GTAAGGACGCAGCTTCTCAT+GGG | + | tig0024372:60291-60310 | Msa1416600:CDS | 50.0% | |
| AGCGTAACCTGACTGTCTTG+AGG | - | tig0024372:60380-60399 | None:intergenic | 50.0% | |
| GAACCTCTGCCTTAAGCACA+GGG | - | tig0024372:61063-61082 | None:intergenic | 50.0% | |
| AGAACCTCTGCCTTAAGCAC+AGG | - | tig0024372:61064-61083 | None:intergenic | 50.0% | |
| AACTGGACAAAGCCCGGAAA+TGG | + | tig0024372:61315-61334 | Msa1416600:CDS | 50.0% | |
| ACTGGACAAAGCCCGGAAAT+GGG | + | tig0024372:61316-61335 | Msa1416600:CDS | 50.0% | |
| CTCCTTCTTCCAATCAGGGT+TGG | - | tig0024372:61350-61369 | None:intergenic | 50.0% | |
| GGGGTTTCGGGAAGATGAAG+AGG | - | tig0024372:58859-58878 | None:intergenic | 55.0% | |
| TGCTGCAACACGGTCCACAA+TGG | - | tig0024372:58929-58948 | None:intergenic | 55.0% | |
| ! | TCTGTTAGCCTCGGAGCATG+TGG | + | tig0024372:59092-59111 | Msa1416600:CDS | 55.0% |
| TCCATGTTCCACATGCTCCG+AGG | - | tig0024372:59103-59122 | None:intergenic | 55.0% | |
| GTCAGTGCCAACTGGTCCAT+CGG | - | tig0024372:59160-59179 | None:intergenic | 55.0% | |
| AGAAACACAGCGGACACACG+AGG | - | tig0024372:59240-59259 | None:intergenic | 55.0% | |
| CTTCCAAGCAGGTGAAGACC+TGG | - | tig0024372:59674-59693 | None:intergenic | 55.0% | |
| GATAGACGACAAGACCCTCC+CGG | - | tig0024372:59915-59934 | None:intergenic | 55.0% | |
| GGGTCAATTGGTGTGGCATC+AGG | + | tig0024372:60074-60093 | Msa1416600:CDS | 55.0% | |
| GGTAAGGACGCAGCTTCTCA+TGG | + | tig0024372:60290-60309 | Msa1416600:CDS | 55.0% | |
| AGTTGTGTTGCGCACTGAGC+AGG | + | tig0024372:60437-60456 | Msa1416600:intron | 55.0% | |
| AGTCCCTGTGCTTAAGGCAG+AGG | + | tig0024372:61057-61076 | Msa1416600:intron | 55.0% | |
| !! | TTCTGTCGGCTTCCGGTTTC+TGG | + | tig0024372:61189-61208 | Msa1416600:intron | 55.0% |
| GCCTCGGAGCATGTGGAACA+TGG | + | tig0024372:59099-59118 | Msa1416600:CDS | 60.0% | |
| GCACTACGAGGATAGCCGTG+AGG | + | tig0024372:59485-59504 | Msa1416600:CDS | 60.0% | |
| GGAGTGCAGTCACTGCCTCA+CGG | - | tig0024372:59503-59522 | None:intergenic | 60.0% | |
| TGAGGCAGTGACTGCACTCC+TGG | + | tig0024372:59503-59522 | Msa1416600:CDS | 60.0% | |
| GGACCAGGTCTTCACCTGCT+TGG | + | tig0024372:59668-59687 | Msa1416600:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024372 | gene | 58787 | 61472 | 58787 | ID=Msa1416600;Name=Msa1416600 |
| tig0024372 | mRNA | 58787 | 61472 | 58787 | ID=Msa1416600-mRNA-1;Parent=Msa1416600;Name=Msa1416600-mRNA-1;_AED=0.32;_eAED=0.33;_QI=0|0|0.33|0.66|1|1|3|70|601 |
| tig0024372 | exon | 58787 | 60391 | 58787 | ID=Msa1416600-mRNA-1:exon:22989;Parent=Msa1416600-mRNA-1 |
| tig0024372 | exon | 60597 | 60655 | 60597 | ID=Msa1416600-mRNA-1:exon:22990;Parent=Msa1416600-mRNA-1 |
| tig0024372 | exon | 61261 | 61472 | 61261 | ID=Msa1416600-mRNA-1:exon:22991;Parent=Msa1416600-mRNA-1 |
| tig0024372 | CDS | 58787 | 60391 | 58787 | ID=Msa1416600-mRNA-1:cds;Parent=Msa1416600-mRNA-1 |
| tig0024372 | CDS | 60597 | 60655 | 60597 | ID=Msa1416600-mRNA-1:cds;Parent=Msa1416600-mRNA-1 |
| tig0024372 | CDS | 61261 | 61402 | 61261 | ID=Msa1416600-mRNA-1:cds;Parent=Msa1416600-mRNA-1 |
| tig0024372 | three_prime_UTR | 61403 | 61472 | 61403 | ID=Msa1416600-mRNA-1:three_prime_utr;Parent=Msa1416600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
