AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002990.t1 MTR_2g023910 98.039 510 10 0 1 510 1 510 0.0 1036
MS.gene002990.t1 MTR_4g132420 71.511 523 132 4 1 510 1 519 0.0 769
MS.gene002990.t1 MTR_1g484940 58.594 512 206 5 1 510 1 508 0.0 599
MS.gene002990.t1 MTR_7g111530 57.455 503 208 4 9 510 14 511 0.0 586
MS.gene002990.t1 MTR_7g111530 57.455 503 208 4 9 510 7 504 0.0 586
MS.gene002990.t1 MTR_4g123563 50.395 506 240 2 5 510 3 497 0.0 557
MS.gene002990.t1 MTR_2g045420 49.312 509 251 2 5 510 3 507 0.0 535
MS.gene002990.t1 MTR_2g045420 46.916 535 251 3 5 510 3 533 0.0 521
MS.gene002990.t1 MTR_2g045420 46.828 536 251 3 5 510 3 534 0.0 520
MS.gene002990.t1 MTR_7g111530 55.381 446 193 4 9 453 7 447 3.70e-172 493
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002990.t1 AT1G11910 70.297 505 146 1 6 510 6 506 0.0 751
MS.gene002990.t1 AT1G11910 70.297 505 146 1 6 510 17 517 0.0 750
MS.gene002990.t1 AT1G62290 68.811 513 155 2 1 509 1 512 0.0 749
MS.gene002990.t1 AT1G62290 68.811 513 155 2 1 509 1 512 0.0 749
MS.gene002990.t1 AT1G62290 68.378 487 149 2 1 483 1 486 0.0 704
MS.gene002990.t1 AT4G04460 65.504 516 164 6 1 510 1 508 0.0 694
MS.gene002990.t1 AT4G04460 65.116 516 162 7 1 510 1 504 0.0 684
MS.gene002990.t1 AT1G62290 67.396 457 144 2 1 453 1 456 0.0 645
MS.gene002990.t1 AT1G62290 67.396 457 144 2 1 453 1 456 0.0 645
MS.gene002990.t1 AT1G62290 67.225 418 132 2 1 414 1 417 0.0 586
MS.gene002990.t1 AT4G22050 45.492 244 125 6 74 313 34 273 1.65e-55 190
MS.gene002990.t1 AT1G69100 39.919 248 139 7 77 316 46 291 9.39e-51 178
MS.gene002990.t1 AT1G69100 39.919 248 139 7 77 316 38 283 1.02e-50 177

Find 132 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGTACTGGAGCAGTTTC+TGG 0.150462 2.2:+62020478 MS.gene002990:CDS
ATTTGAAATTATACCTCTTC+TGG 0.170940 2.2:-62022448 None:intergenic
CTTGGAACCATACTTCTTAA+TGG 0.236719 2.2:-62019853 None:intergenic
CAAATGTGCACAGCCCAATT+TGG 0.251367 2.2:-62021784 None:intergenic
TCACCTCCTTGCTCCTCATT+TGG 0.306254 2.2:-62020912 None:intergenic
AAGAAACCAAAGAAAACAAT+AGG 0.321446 2.2:-62019731 None:intergenic
TGGTCTTCCATTAAGAAGTA+TGG 0.324456 2.2:+62019846 MS.gene002990:CDS
CATTAGTGGCTTTACTGCTT+TGG 0.330010 2.2:+62022681 MS.gene002990:CDS
TATCATACAGTCTTTGACTA+TGG 0.334757 2.2:+62023119 MS.gene002990:CDS
AGCTCCTCCAAGGATGTTCT+TGG 0.335186 2.2:-62019871 None:intergenic
TTTCTGCCACAGGTACAAAA+TGG 0.338479 2.2:+62020836 MS.gene002990:intron
CTGTTTGATTCTGCTTCAGC+TGG 0.343565 2.2:-62022205 None:intergenic
TGGTGTTAAGTTTGTGTTTG+TGG 0.371202 2.2:+62019706 MS.gene002990:CDS
AACCAAGCAATTGGAGCATC+TGG 0.373746 2.2:+62021499 MS.gene002990:CDS
TGTTGATCCTGCTCACTTCA+AGG 0.379733 2.2:+62020950 MS.gene002990:CDS
TTGGAAATGCTGTCCCAATA+TGG 0.383429 2.2:+62020733 MS.gene002990:CDS
ATCAGTTAAATGTTACTTCT+CGG 0.383576 2.2:+62020022 MS.gene002990:CDS
AAAAGGTCTGCTCCCAAATT+GGG 0.392569 2.2:+62021771 MS.gene002990:CDS
TTTGATGGTTTGCTTGGACT+TGG 0.393686 2.2:+62020693 MS.gene002990:CDS
TACTTGGATGCTCAGTACTA+TGG 0.395769 2.2:+62019924 MS.gene002990:CDS
AGACAAACCATTTGGCTTGT+AGG 0.400295 2.2:-62020192 None:intergenic
TATGCGAGATGGCTGTTGTC+TGG 0.401356 2.2:+62022174 MS.gene002990:CDS
TTGATGGCACTCATGGTGTT+AGG 0.401957 2.2:+62021804 MS.gene002990:CDS
TTTGTCGCGGCTAAGTTTGA+TGG 0.405170 2.2:+62020678 MS.gene002990:CDS
TTTGAAATTATACCTCTTCT+GGG 0.407540 2.2:-62022447 None:intergenic
GTTTCTTGTGTACCAAATGA+TGG 0.409083 2.2:+62019747 MS.gene002990:CDS
TACGTGCCTGTGACGCGAAA+AGG 0.413351 2.2:+62020984 MS.gene002990:CDS
AAATGTGCACAGCCCAATTT+GGG 0.415023 2.2:-62021783 None:intergenic
AAGAACATCCTTGGAGGAGC+TGG 0.416218 2.2:+62019873 MS.gene002990:CDS
ATCCTACGCAACCCATCATT+TGG 0.424565 2.2:-62019759 None:intergenic
CTTTATAAATGCAGGATCCT+TGG 0.426317 2.2:+62023077 MS.gene002990:intron
ATTGGGCTGTGCACATTTGA+TGG 0.433145 2.2:+62021788 MS.gene002990:CDS
GCTAAGTTTGATGGTTTGCT+TGG 0.435069 2.2:+62020687 MS.gene002990:CDS
GATAATAAACTACGCCGATT+CGG 0.436523 2.2:+62022235 MS.gene002990:CDS
AGGACTGTTGTTGATCAATA+TGG 0.438787 2.2:+62021541 MS.gene002990:CDS
ACTATGATAAACCAAGCAAT+TGG 0.441944 2.2:+62021490 MS.gene002990:CDS
CTCCAGATGCTCCAATTGCT+TGG 0.442375 2.2:-62021501 None:intergenic
GACAAAATGCCTAACCCATT+GGG 0.442813 2.2:+62022343 MS.gene002990:CDS
CTTTCTTCAGTACATATTGA+AGG 0.445847 2.2:+62022633 MS.gene002990:intron
CTGTGACGCGAAAAGGATAT+TGG 0.451124 2.2:+62020991 MS.gene002990:CDS
AGACTCAGGGACGTCTTTGT+TGG 0.458656 2.2:+62021298 MS.gene002990:CDS
TTGTTGGGGTCGAAGGGTTG+TGG 0.460294 2.2:+62019816 MS.gene002990:CDS
ATGTGCACAGATACCATATT+GGG 0.461759 2.2:-62020746 None:intergenic
AAAGTTTCCTTCACCATTGG+TGG 0.463805 2.2:+62022406 MS.gene002990:CDS
TGTTGCATTGAAGAATTACT+TGG 0.466682 2.2:+62019908 MS.gene002990:CDS
CTCCTCCACGTGGCCCACTC+TGG 0.467933 2.2:+62022710 MS.gene002990:CDS
GGTTAAACAAGGTCTTGTTA+AGG 0.471257 2.2:+62020857 MS.gene002990:CDS
ATGGGAGATGTACTTATTGA+TGG 0.474879 2.2:+62021124 MS.gene002990:CDS
CCTAAAGTTTCCTTCACCAT+TGG 0.475640 2.2:+62022403 MS.gene002990:CDS
ACTCATGCTGCAATTCAGTA+TGG 0.476846 2.2:+62020460 MS.gene002990:CDS
TGACAAAATGCCTAACCCAT+TGG 0.477180 2.2:+62022342 MS.gene002990:CDS
TTGAGCCAAAATGAAAATAC+AGG 0.478978 2.2:-62020882 None:intergenic
AATGATGGGTTGCGTAGGAT+TGG 0.479080 2.2:+62019762 MS.gene002990:CDS
GCTGCAGCCCAATGCATTAG+TGG 0.479385 2.2:+62022667 MS.gene002990:CDS
AGCTACGACAATGTAAAAGT+TGG 0.480154 2.2:+62020508 MS.gene002990:CDS
GATGATTGTCCCAATGGGTT+AGG 0.482537 2.2:-62022352 None:intergenic
GATCCTTGGAGATATCTTCA+TGG 0.488764 2.2:+62023091 MS.gene002990:CDS
GCTGCAATTCAGTATGGTAC+TGG 0.489085 2.2:+62020466 MS.gene002990:CDS
AATGTGCACAGATACCATAT+TGG 0.492384 2.2:-62020747 None:intergenic
GACTATGGTAAACTCAGAGT+TGG 0.498049 2.2:+62023134 MS.gene002990:CDS
AGTAAAGCCACTAATGCATT+GGG 0.502172 2.2:-62022674 None:intergenic
TATGGTTCCAAGAACATCCT+TGG 0.504781 2.2:+62019864 MS.gene002990:CDS
TCAGGGACGTCTTTGTTGGC+AGG 0.505869 2.2:+62021302 MS.gene002990:CDS
GTCTTTGTTGGCAGGTCCAA+CGG 0.508348 2.2:+62021310 MS.gene002990:CDS
TGCACATTTGATGGCACTCA+TGG 0.508356 2.2:+62021797 MS.gene002990:CDS
GAATATTCTCTATGCTGCTT+CGG 0.515448 2.2:-62023162 None:intergenic
GGATTTCAAGAGATATCAGT+TGG 0.516373 2.2:+62020714 MS.gene002990:CDS
TTGGCTTGTAGGTACTTGAC+TGG 0.518956 2.2:-62020181 None:intergenic
CGGTCTGTTCCACCACACTC+TGG 0.522135 2.2:-62022109 None:intergenic
CAGTAAAGCCACTAATGCAT+TGG 0.522571 2.2:-62022675 None:intergenic
CAACAGATGATTGTCCCAAT+GGG 0.523924 2.2:-62022357 None:intergenic
GTTGATCCTGCTCACTTCAA+GGG 0.527930 2.2:+62020951 MS.gene002990:CDS
TCTTCAGTACATATTGAAGG+TGG 0.529391 2.2:+62022636 MS.gene002990:intron
ATCCTTGGAGATATCTTCAT+GGG 0.531315 2.2:+62023092 MS.gene002990:CDS
GCCGCGACAAATGTAAGTCC+AGG 0.533163 2.2:-62020666 None:intergenic
AGAAACCAAAGAAAACAATA+GGG 0.536435 2.2:-62019730 None:intergenic
TCAACAGATGATTGTCCCAA+TGG 0.536746 2.2:-62022358 None:intergenic
TGTTCGCCCTTGAAGTGAGC+AGG 0.537690 2.2:-62020957 None:intergenic
TACTGGTAGCTCTAATACCT+GGG 0.537864 2.2:+62019995 MS.gene002990:CDS
CCAATGGTGAAGGAAACTTT+AGG 0.538511 2.2:-62022403 None:intergenic
TTTCTTGTGTACCAAATGAT+GGG 0.539047 2.2:+62019748 MS.gene002990:CDS
ATACTGGTAGCTCTAATACC+TGG 0.544445 2.2:+62019994 MS.gene002990:CDS
CAGAGTGGGCCACGTGGAGG+AGG 0.544746 2.2:-62022709 None:intergenic
TTGAAACTAAAGTACCGAAT+CGG 0.544906 2.2:-62022249 None:intergenic
CTTCAGTACATATTGAAGGT+GGG 0.547423 2.2:+62022637 MS.gene002990:intron
TCAAGTACCTACAAGCCAAA+TGG 0.548903 2.2:+62020185 MS.gene002990:CDS
ATTGAAGCGACTAGAGAGCC+TGG 0.549120 2.2:+62020648 MS.gene002990:CDS
TACTATGGTGAAATATCCAT+TGG 0.551083 2.2:+62019939 MS.gene002990:CDS
TACATATTGAAGGTGGGTGA+AGG 0.551930 2.2:+62022643 MS.gene002990:CDS
ATTTGACCTTGCCCCAGAAG+AGG 0.561464 2.2:+62022435 MS.gene002990:CDS
TGTTCAGCAATAGCAGACTC+AGG 0.564304 2.2:+62021284 MS.gene002990:CDS
AAACTTTGATGTACCAGAGT+GGG 0.565063 2.2:-62022723 None:intergenic
GGCTAGACTTGTACTTAGCA+TGG 0.565504 2.2:-62020160 None:intergenic
GGTGAAGGAAACTTTAGGCA+TGG 0.568347 2.2:-62022398 None:intergenic
CAGCTTCTCCAGCTCCTCCA+AGG 0.571220 2.2:-62019881 None:intergenic
GAGTTTACAGTCAAGAATGC+AGG 0.573602 2.2:+62021521 MS.gene002990:CDS
CTTATTGATGGAAAACCCAC+TGG 0.573688 2.2:+62021136 MS.gene002990:CDS
GACGCGAAAAGGATATTGGC+AGG 0.577867 2.2:+62020995 MS.gene002990:CDS
CGAAGGGTTGTGGATCATCA+TGG 0.583877 2.2:+62019826 MS.gene002990:CDS
ATTATACCTCTTCTGGGGCA+AGG 0.592540 2.2:-62022441 None:intergenic
GCCTGGACTTACATTTGTCG+CGG 0.598101 2.2:+62020665 MS.gene002990:CDS
GAGAAGTAACATTTAACTGA+TGG 0.604372 2.2:-62020020 None:intergenic
AGTTGGCGATGTAGTTGTGA+AGG 0.604962 2.2:+62020525 MS.gene002990:CDS
GGTTCCAAGAACATCCTTGG+AGG 0.606106 2.2:+62019867 MS.gene002990:CDS
AGTAGCATCTTGATGACCAC+CGG 0.613662 2.2:-62022144 None:intergenic
GCTCAATCGTAATCCAAATG+AGG 0.614784 2.2:+62020899 MS.gene002990:CDS
TAGTATGGGTATCCAGAGTG+TGG 0.620668 2.2:+62022097 MS.gene002990:intron
AGTCTGAGGAGGAGTACCAA+TGG 0.621304 2.2:-62019955 None:intergenic
CGTAATCCAAATGAGGAGCA+AGG 0.621432 2.2:+62020906 MS.gene002990:CDS
AAAATCACAGTAAAAGTCTG+AGG 0.621645 2.2:-62019969 None:intergenic
TTGAAATTATACCTCTTCTG+GGG 0.624603 2.2:-62022446 None:intergenic
TACTTGTTCTGTATGCGAGA+TGG 0.625056 2.2:+62022163 MS.gene002990:CDS
ACCACCGGATGATACTCTAT+CGG 0.633965 2.2:-62022129 None:intergenic
CAGACCGATAGAGTATCATC+CGG 0.638815 2.2:+62022125 MS.gene002990:CDS
TTGGATGTTCCTCCTCCACG+TGG 0.643322 2.2:+62022700 MS.gene002990:CDS
TATGGGTATCCAGAGTGTGG+TGG 0.643466 2.2:+62022100 MS.gene002990:CDS
ATCACAGTAAAAGTCTGAGG+AGG 0.651253 2.2:-62019966 None:intergenic
TACCAGAGTGGGCCACGTGG+AGG 0.657844 2.2:-62022712 None:intergenic
GCCCCATGAAGATATCTCCA+AGG 0.660008 2.2:-62023094 None:intergenic
GTTCAGCAATAGCAGACTCA+GGG 0.660883 2.2:+62021285 MS.gene002990:CDS
ACATTTAACTGATGGCACCC+AGG 0.661281 2.2:-62020012 None:intergenic
CGATGTAGTTGTGAAGGACG+TGG 0.664182 2.2:+62020531 MS.gene002990:CDS
AGCAGAATCAAACAGAAGAG+CGG 0.677190 2.2:+62022213 MS.gene002990:CDS
AGGTACAAAATGGTTAAACA+AGG 0.677888 2.2:+62020846 MS.gene002990:intron
TAAACTTTGATGTACCAGAG+TGG 0.684226 2.2:-62022724 None:intergenic
AATGGGAAACAAGTTGAATG+TGG 0.690214 2.2:+62019683 None:intergenic
ACCGATAGAGTATCATCCGG+TGG 0.695201 2.2:+62022128 MS.gene002990:CDS
GGGAAACAAGTTGAATGTGG+TGG 0.697113 2.2:+62019686 MS.gene002990:CDS
ATGTACCAGAGTGGGCCACG+TGG 0.705272 2.2:-62022715 None:intergenic
TCCTTGGAGATATCTTCATG+GGG 0.706349 2.2:+62023093 MS.gene002990:CDS
TACCAAATGATGGGTTGCGT+AGG 0.717424 2.2:+62019757 MS.gene002990:CDS
AATCCAAATGAGGAGCAAGG+AGG 0.761109 2.2:+62020909 MS.gene002990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAAAAATAAATAAGGA+AGG + chr2.2:62022838-62022857 MS.gene002990:intron 10.0%
!! CAATGAAAGATTTAATAAAA+TGG - chr2.2:62022070-62022089 None:intergenic 15.0%
!!! ATTTATTTATATTCCGATTT+TGG + chr2.2:62020091-62020110 MS.gene002990:intron 15.0%
!! AAATTTCAGAAACAAAACAT+TGG - chr2.2:62020318-62020337 None:intergenic 20.0%
!! TCAGAAATAAAAATCTATAG+CGG - chr2.2:62021362-62021381 None:intergenic 20.0%
!! TTATTCTTTCAAATTATGAC+CGG - chr2.2:62021928-62021947 None:intergenic 20.0%
!! TTCTTCATGAAAATAAAACA+CGG - chr2.2:62022511-62022530 None:intergenic 20.0%
!!! ATCTATATTTACTTTTGAGA+AGG + chr2.2:62022469-62022488 MS.gene002990:intron 20.0%
!!! GTGTTTTTGTTTTCTTTTTT+GGG - chr2.2:62023019-62023038 None:intergenic 20.0%
!!! GTTTCTGAAATTTTGTAATT+TGG + chr2.2:62020325-62020344 MS.gene002990:intron 20.0%
!!! GTTTGATAATAATCACTTAA+TGG + chr2.2:62023051-62023070 MS.gene002990:intron 20.0%
!!! TATATTTTTTTATTCCCTTC+AGG + chr2.2:62020620-62020639 MS.gene002990:intron 20.0%
!!! TGAAATTTTGTAATTTGGTT+TGG + chr2.2:62020330-62020349 MS.gene002990:intron 20.0%
!!! TGTGTTTTTGTTTTCTTTTT+TGG - chr2.2:62023020-62023039 None:intergenic 20.0%
! AAATTTAACCAGATTGAACT+GGG - chr2.2:62022883-62022902 None:intergenic 25.0%
! AACAAACAAATATTTACCAG+TGG - chr2.2:62021155-62021174 None:intergenic 25.0%
! AAGAAACCAAAGAAAACAAT+AGG - chr2.2:62019734-62019753 None:intergenic 25.0%
! AAGCATTATTAATTCTTTCC+AGG - chr2.2:62021398-62021417 None:intergenic 25.0%
! AAGTTAACAATGGAATCTTT+GGG - chr2.2:62021835-62021854 None:intergenic 25.0%
! AATGGTATCTTTATAAATGC+AGG + chr2.2:62023069-62023088 MS.gene002990:intron 25.0%
! ACAAACAAATATTTACCAGT+GGG - chr2.2:62021154-62021173 None:intergenic 25.0%
! ACATGAAATGAAACAAACAA+AGG - chr2.2:62020243-62020262 None:intergenic 25.0%
! AGAAACCAAAGAAAACAATA+GGG - chr2.2:62019733-62019752 None:intergenic 25.0%
! CAAGCAAAAACAAGTATATT+AGG - chr2.2:62021456-62021475 None:intergenic 25.0%
! GAATAAATGCTTGAAGATTT+AGG + chr2.2:62021336-62021355 MS.gene002990:intron 25.0%
! TAAATTTAACCAGATTGAAC+TGG - chr2.2:62022884-62022903 None:intergenic 25.0%
! TGGTTTGAAAAAGAACAAAT+TGG + chr2.2:62019782-62019801 MS.gene002990:CDS 25.0%
!! ATCAGTTAAATGTTACTTCT+CGG + chr2.2:62020022-62020041 MS.gene002990:CDS 25.0%
!! ATTTGAAATTATACCTCTTC+TGG - chr2.2:62022451-62022470 None:intergenic 25.0%
!! ATTTTCTTATGGTTTTCACT+TGG + chr2.2:62021730-62021749 MS.gene002990:intron 25.0%
!! CTAAGTTCATTTGTATTTTC+TGG + chr2.2:62021091-62021110 MS.gene002990:intron 25.0%
!! TTGACTGTTGAATTTTCTTA+TGG + chr2.2:62021719-62021738 MS.gene002990:intron 25.0%
!! TTTGAAATTATACCTCTTCT+GGG - chr2.2:62022450-62022469 None:intergenic 25.0%
!!! AGAGTTTGTCTTGTTATTTA+GGG + chr2.2:62020437-62020456 MS.gene002990:intron 25.0%
!!! TAATTTGGTTTGGAATAACA+CGG + chr2.2:62020340-62020359 MS.gene002990:intron 25.0%
!!! TCTTCTTCTTTTGTTTTTTG+AGG + chr2.2:62020212-62020231 MS.gene002990:intron 25.0%
AAAATCACAGTAAAAGTCTG+AGG - chr2.2:62019972-62019991 None:intergenic 30.0%
AAAGAAGAAGACAAACCATT+TGG - chr2.2:62020203-62020222 None:intergenic 30.0%
AAATACCTCCTAATGAGTAA+TGG - chr2.2:62020817-62020836 None:intergenic 30.0%
AAGCAAATGGAAATTGAATC+AGG - chr2.2:62022616-62022635 None:intergenic 30.0%
ACTATGATAAACCAAGCAAT+TGG + chr2.2:62021490-62021509 MS.gene002990:CDS 30.0%
AGCAAATGGAAATTGAATCA+GGG - chr2.2:62022615-62022634 None:intergenic 30.0%
AGGTACAAAATGGTTAAACA+AGG + chr2.2:62020846-62020865 MS.gene002990:intron 30.0%
CAAGTTAACAATGGAATCTT+TGG - chr2.2:62021836-62021855 None:intergenic 30.0%
CACATTAACAAAGCCAAAAT+CGG - chr2.2:62020107-62020126 None:intergenic 30.0%
CATACAAATAAGCTACTCAA+AGG - chr2.2:62021432-62021451 None:intergenic 30.0%
CCAGATACATATTCATCATA+TGG - chr2.2:62020064-62020083 None:intergenic 30.0%
CCATATGATGAATATGTATC+TGG + chr2.2:62020061-62020080 MS.gene002990:intron 30.0%
CTTGAAAATAAATGCATGTC+CGG - chr2.2:62022012-62022031 None:intergenic 30.0%
CTTTCTTCAGTACATATTGA+AGG + chr2.2:62022633-62022652 MS.gene002990:intron 30.0%
GAGAAGTAACATTTAACTGA+TGG - chr2.2:62020023-62020042 None:intergenic 30.0%
GTAAATTACTCTCCATAGTT+TGG + chr2.2:62021599-62021618 MS.gene002990:intron 30.0%
TACTATGGTGAAATATCCAT+TGG + chr2.2:62019939-62019958 MS.gene002990:CDS 30.0%
TATCATACAGTCTTTGACTA+TGG + chr2.2:62023119-62023138 MS.gene002990:CDS 30.0%
TATGTACTGAAGAAAGCAAA+TGG - chr2.2:62022629-62022648 None:intergenic 30.0%
TCAACATATTATTCGTCTGA+AGG - chr2.2:62020587-62020606 None:intergenic 30.0%
TGTTGCATTGAAGAATTACT+TGG + chr2.2:62019908-62019927 MS.gene002990:CDS 30.0%
TTCAAAATACTTCGTCATTC+AGG + chr2.2:62021245-62021264 MS.gene002990:intron 30.0%
TTCATTGTTTCCTCTAGTAT+GGG + chr2.2:62022083-62022102 MS.gene002990:intron 30.0%
TTGAAATTATACCTCTTCTG+GGG - chr2.2:62022449-62022468 None:intergenic 30.0%
TTGAGCCAAAATGAAAATAC+AGG - chr2.2:62020885-62020904 None:intergenic 30.0%
TTTCATTGTTTCCTCTAGTA+TGG + chr2.2:62022082-62022101 MS.gene002990:intron 30.0%
TTTCTTGTGTACCAAATGAT+GGG + chr2.2:62019748-62019767 MS.gene002990:CDS 30.0%
! AGGATCCTGTATTTTCATTT+TGG + chr2.2:62020877-62020896 MS.gene002990:CDS 30.0%
! TAACTTTTCTACGCATGTAA+TGG + chr2.2:62022563-62022582 MS.gene002990:intron 30.0%
! TTTACTGTGATTTTCGATAC+TGG + chr2.2:62019978-62019997 MS.gene002990:CDS 30.0%
! TTTTCATGAAGAATTTGCCT+TGG + chr2.2:62022518-62022537 MS.gene002990:intron 30.0%
!! ATTTTCTGGATAGTTTGCAA+TGG + chr2.2:62021105-62021124 MS.gene002990:intron 30.0%
!! GAGAGTTTGTCTTGTTATTT+AGG + chr2.2:62020436-62020455 MS.gene002990:intron 30.0%
!! TTGAAACTAAAGTACCGAAT+CGG - chr2.2:62022252-62022271 None:intergenic 30.0%
!! TTTTCTGGATAGTTTGCAAT+GGG + chr2.2:62021106-62021125 MS.gene002990:intron 30.0%
!!! TAGGGTTTTCAAGTTAACAA+TGG - chr2.2:62021845-62021864 None:intergenic 30.0%
AAACTTTGATGTACCAGAGT+GGG - chr2.2:62022726-62022745 None:intergenic 35.0%
AAAGCTGCAATATCATCACA+AGG - chr2.2:62022321-62022340 None:intergenic 35.0%
AATGTGCACAGATACCATAT+TGG - chr2.2:62020750-62020769 None:intergenic 35.0%
AGCTACGACAATGTAAAAGT+TGG + chr2.2:62020508-62020527 MS.gene002990:CDS 35.0%
AGGACTGTTGTTGATCAATA+TGG + chr2.2:62021541-62021560 MS.gene002990:CDS 35.0%
AGTAAAGCCACTAATGCATT+GGG - chr2.2:62022677-62022696 None:intergenic 35.0%
ATCAGGGAAACAGATAAACA+TGG - chr2.2:62022599-62022618 None:intergenic 35.0%
ATCCTTGGAGATATCTTCAT+GGG + chr2.2:62023092-62023111 MS.gene002990:CDS 35.0%
ATGGGAGATGTACTTATTGA+TGG + chr2.2:62021124-62021143 MS.gene002990:CDS 35.0%
ATGTGCACAGATACCATATT+GGG - chr2.2:62020749-62020768 None:intergenic 35.0%
ATTGGAACCCAAAAACTTGT+TGG + chr2.2:62019800-62019819 MS.gene002990:CDS 35.0%
CAACTGTTGTTGAACCAATT+GGG + chr2.2:62022923-62022942 MS.gene002990:intron 35.0%
CAAGCATTTATTCATACCGT+TGG - chr2.2:62021329-62021348 None:intergenic 35.0%
CATGGTTCAATTGGTTGAAT+CGG + chr2.2:62022797-62022816 MS.gene002990:intron 35.0%
CGCTTCAATAAATTCCTGAA+GGG - chr2.2:62020637-62020656 None:intergenic 35.0%
CGTCTGAAGGAAACAAAATA+TGG - chr2.2:62020574-62020593 None:intergenic 35.0%
CTTCAGTACATATTGAAGGT+GGG + chr2.2:62022637-62022656 MS.gene002990:intron 35.0%
CTTGGAACCATACTTCTTAA+TGG - chr2.2:62019856-62019875 None:intergenic 35.0%
CTTTATAAATGCAGGATCCT+TGG + chr2.2:62023077-62023096 MS.gene002990:intron 35.0%
GAACCTAATCAACCAAACTA+TGG - chr2.2:62021614-62021633 None:intergenic 35.0%
GAATAAACATGTTGACAGTC+AGG - chr2.2:62021025-62021044 None:intergenic 35.0%
GGATTTCAAGAGATATCAGT+TGG + chr2.2:62020714-62020733 MS.gene002990:CDS 35.0%
GTATGTGTCAAGTAAAGAAC+CGG - chr2.2:62022979-62022998 None:intergenic 35.0%
GTTTCTTGTGTACCAAATGA+TGG + chr2.2:62019747-62019766 MS.gene002990:CDS 35.0%
TAAACTTTGATGTACCAGAG+TGG - chr2.2:62022727-62022746 None:intergenic 35.0%
TCATAGCATTAGACACAGTA+GGG - chr2.2:62021863-62021882 None:intergenic 35.0%
TCGCTTCAATAAATTCCTGA+AGG - chr2.2:62020638-62020657 None:intergenic 35.0%
TCTCCATAGTTTGGTTGATT+AGG + chr2.2:62021608-62021627 MS.gene002990:intron 35.0%
TCTTCAGTACATATTGAAGG+TGG + chr2.2:62022636-62022655 MS.gene002990:intron 35.0%
TGGTCTTCCATTAAGAAGTA+TGG + chr2.2:62019846-62019865 MS.gene002990:CDS 35.0%
TTCACAAAGCAACAAATCCA+AGG - chr2.2:62022538-62022557 None:intergenic 35.0%
TTCATAGCATTAGACACAGT+AGG - chr2.2:62021864-62021883 None:intergenic 35.0%
TTTCCATGCCATTACTCATT+AGG + chr2.2:62020806-62020825 MS.gene002990:intron 35.0%
! GATAATAAACTACGCCGATT+CGG + chr2.2:62022235-62022254 MS.gene002990:CDS 35.0%
! GTTTAACCATTTTGTACCTG+TGG - chr2.2:62020845-62020864 None:intergenic 35.0%
! TGGTGTTAAGTTTGTGTTTG+TGG + chr2.2:62019706-62019725 MS.gene002990:CDS 35.0%
! TTCAATTTTGCAATTGCTCG+TGG + chr2.2:62021567-62021586 MS.gene002990:CDS 35.0%
! TTGGAACCCAAAAACTTGTT+GGG + chr2.2:62019801-62019820 MS.gene002990:CDS 35.0%
!! GGTTAAACAAGGTCTTGTTA+AGG + chr2.2:62020857-62020876 MS.gene002990:CDS 35.0%
!!! GTCAAATTTTTTGCCACCAA+TGG - chr2.2:62022422-62022441 None:intergenic 35.0%
AAAAAGGTCTGCTCCCAAAT+TGG + chr2.2:62021770-62021789 MS.gene002990:CDS 40.0%
AAAAGGTCTGCTCCCAAATT+GGG + chr2.2:62021771-62021790 MS.gene002990:CDS 40.0%
AAAGTTTCCTTCACCATTGG+TGG + chr2.2:62022406-62022425 MS.gene002990:CDS 40.0%
AAATGTGCACAGCCCAATTT+GGG - chr2.2:62021786-62021805 None:intergenic 40.0%
AACAATGATTCCACACCATG+TGG - chr2.2:62021967-62021986 None:intergenic 40.0%
ACAGTCAACACTCATGACAA+TGG - chr2.2:62021641-62021660 None:intergenic 40.0%
ACTCATGCTGCAATTCAGTA+TGG + chr2.2:62020460-62020479 MS.gene002990:CDS 40.0%
AGCAGAATCAAACAGAAGAG+CGG + chr2.2:62022213-62022232 MS.gene002990:CDS 40.0%
AGTGATTGAGTGTAACCACA+TGG + chr2.2:62021949-62021968 MS.gene002990:intron 40.0%
ATCACAGTAAAAGTCTGAGG+AGG - chr2.2:62019969-62019988 None:intergenic 40.0%
ATTAGAGTTATGCAGCACTG+AGG - chr2.2:62022035-62022054 None:intergenic 40.0%
CAACAGATGATTGTCCCAAT+GGG - chr2.2:62022360-62022379 None:intergenic 40.0%
CACAAGGCTATAGTTAAGAG+AGG - chr2.2:62022305-62022324 None:intergenic 40.0%
CAGTAAAGCCACTAATGCAT+TGG - chr2.2:62022678-62022697 None:intergenic 40.0%
CCAACTGTTGTTGAACCAAT+TGG + chr2.2:62022922-62022941 MS.gene002990:intron 40.0%
CCAATGGTGAAGGAAACTTT+AGG - chr2.2:62022406-62022425 None:intergenic 40.0%
CCTAAAGTTTCCTTCACCAT+TGG + chr2.2:62022403-62022422 MS.gene002990:CDS 40.0%
CTATAGTTAAGAGAGGAAGC+AGG - chr2.2:62022298-62022317 None:intergenic 40.0%
CTTATTGATGGAAAACCCAC+TGG + chr2.2:62021136-62021155 MS.gene002990:CDS 40.0%
GACAAAATGCCTAACCCATT+GGG + chr2.2:62022343-62022362 MS.gene002990:CDS 40.0%
GACTATGGTAAACTCAGAGT+TGG + chr2.2:62023134-62023153 MS.gene002990:CDS 40.0%
GAGTTTACAGTCAAGAATGC+AGG + chr2.2:62021521-62021540 MS.gene002990:CDS 40.0%
GATCCTTGGAGATATCTTCA+TGG + chr2.2:62023091-62023110 MS.gene002990:CDS 40.0%
GCTCAATCGTAATCCAAATG+AGG + chr2.2:62020899-62020918 MS.gene002990:CDS 40.0%
GTGGAATCATTGTTTGACAC+TGG + chr2.2:62021973-62021992 MS.gene002990:intron 40.0%
TACATATTGAAGGTGGGTGA+AGG + chr2.2:62022643-62022662 MS.gene002990:CDS 40.0%
TACTTGGATGCTCAGTACTA+TGG + chr2.2:62019924-62019943 MS.gene002990:CDS 40.0%
TACTTGTTCTGTATGCGAGA+TGG + chr2.2:62022163-62022182 MS.gene002990:CDS 40.0%
TATGACCGGTATCTATGTGT+CGG - chr2.2:62021914-62021933 None:intergenic 40.0%
TATGGTTCCAAGAACATCCT+TGG + chr2.2:62019864-62019883 MS.gene002990:CDS 40.0%
TCAACAGATGATTGTCCCAA+TGG - chr2.2:62022361-62022380 None:intergenic 40.0%
TCAACCAATTGAACCATGAC+CGG - chr2.2:62022795-62022814 None:intergenic 40.0%
TCAAGTACCTACAAGCCAAA+TGG + chr2.2:62020185-62020204 MS.gene002990:CDS 40.0%
TCCTTGGAGATATCTTCATG+GGG + chr2.2:62023093-62023112 MS.gene002990:CDS 40.0%
TCTGACTAGAGTTTATGACC+TGG + chr2.2:62021377-62021396 MS.gene002990:intron 40.0%
TGACAAAATGCCTAACCCAT+TGG + chr2.2:62022342-62022361 MS.gene002990:CDS 40.0%
TTGGAAATGCTGTCCCAATA+TGG + chr2.2:62020733-62020752 MS.gene002990:CDS 40.0%
TTTCTGCCACAGGTACAAAA+TGG + chr2.2:62020836-62020855 MS.gene002990:intron 40.0%
! CATTAGTGGCTTTACTGCTT+TGG + chr2.2:62022681-62022700 MS.gene002990:CDS 40.0%
! CCAATTGGTTCAACAACAGT+TGG - chr2.2:62022925-62022944 None:intergenic 40.0%
! GCACTTTGTTTGATGCTTCA+TGG + chr2.2:62021201-62021220 MS.gene002990:intron 40.0%
! GTGGACCCTATTGTTTTCTT+TGG + chr2.2:62019725-62019744 MS.gene002990:CDS 40.0%
! TGGTTTTCACTTGGTTATGC+AGG + chr2.2:62021739-62021758 MS.gene002990:intron 40.0%
! TTCGACCCCAACAAGTTTTT+GGG - chr2.2:62019810-62019829 None:intergenic 40.0%
!! AAAAACTTGTTGGGGTCGAA+GGG + chr2.2:62019810-62019829 MS.gene002990:CDS 40.0%
!! AGACAAACCATTTGGCTTGT+AGG - chr2.2:62020195-62020214 None:intergenic 40.0%
!! ATACTGGTAGCTCTAATACC+TGG + chr2.2:62019994-62020013 MS.gene002990:CDS 40.0%
!! GCTAAGTTTGATGGTTTGCT+TGG + chr2.2:62020687-62020706 MS.gene002990:CDS 40.0%
!! TACTGGTAGCTCTAATACCT+GGG + chr2.2:62019995-62020014 MS.gene002990:CDS 40.0%
!! TGAAGTACTGACATAGACAC+TGG + chr2.2:62021880-62021899 MS.gene002990:intron 40.0%
!! TGGAACCCAAAAACTTGTTG+GGG + chr2.2:62019802-62019821 MS.gene002990:CDS 40.0%
!! TTTGATGGTTTGCTTGGACT+TGG + chr2.2:62020693-62020712 MS.gene002990:CDS 40.0%
!!! ACAGTTGGTTTTCAGTCTCT+TGG - chr2.2:62022910-62022929 None:intergenic 40.0%
!!! ATTTGGGAGCAGACCTTTTT+TGG - chr2.2:62021770-62021789 None:intergenic 40.0%
!!! TTTTTTGCCACCAATGGTGA+AGG - chr2.2:62022416-62022435 None:intergenic 40.0%
AAAAACCGGCATCTCCCAAT+TGG - chr2.2:62022940-62022959 None:intergenic 45.0%
AAAACCACACTAGAGATCCC+GGG + chr2.2:62022764-62022783 MS.gene002990:intron 45.0%
AATCCAAATGAGGAGCAAGG+AGG + chr2.2:62020909-62020928 MS.gene002990:CDS 45.0%
ACATTTAACTGATGGCACCC+AGG - chr2.2:62020015-62020034 None:intergenic 45.0%
ACCACCGGATGATACTCTAT+CGG - chr2.2:62022132-62022151 None:intergenic 45.0%
ACTCTGGATACCCATACTAG+AGG - chr2.2:62022096-62022115 None:intergenic 45.0%
AGTTGGCGATGTAGTTGTGA+AGG + chr2.2:62020525-62020544 MS.gene002990:CDS 45.0%
ATCCTACGCAACCCATCATT+TGG - chr2.2:62019762-62019781 None:intergenic 45.0%
ATTGGGCTGTGCACATTTGA+TGG + chr2.2:62021788-62021807 MS.gene002990:CDS 45.0%
CAAAACCACACTAGAGATCC+CGG + chr2.2:62022763-62022782 MS.gene002990:intron 45.0%
CAAATGTGCACAGCCCAATT+TGG - chr2.2:62021787-62021806 None:intergenic 45.0%
CAGATTGAACTGGGTTCTAC+TGG - chr2.2:62022874-62022893 None:intergenic 45.0%
CAGTAGAACCCAGTTCAATC+TGG + chr2.2:62022872-62022891 MS.gene002990:intron 45.0%
CCATGCCATTACTCATTAGG+AGG + chr2.2:62020809-62020828 MS.gene002990:intron 45.0%
CCTCCTAATGAGTAATGGCA+TGG - chr2.2:62020812-62020831 None:intergenic 45.0%
CGAAAAGGATATTGGCAGGT+TGG + chr2.2:62020999-62021018 MS.gene002990:intron 45.0%
CGTAATCCAAATGAGGAGCA+AGG + chr2.2:62020906-62020925 MS.gene002990:CDS 45.0%
CTGTGACGCGAAAAGGATAT+TGG + chr2.2:62020991-62021010 MS.gene002990:CDS 45.0%
CTGTTTGATTCTGCTTCAGC+TGG - chr2.2:62022208-62022227 None:intergenic 45.0%
GCTGCAATTCAGTATGGTAC+TGG + chr2.2:62020466-62020485 MS.gene002990:CDS 45.0%
GGCTAGACTTGTACTTAGCA+TGG - chr2.2:62020163-62020182 None:intergenic 45.0%
GGTGAAGGAAACTTTAGGCA+TGG - chr2.2:62022401-62022420 None:intergenic 45.0%
GTTCAGCAATAGCAGACTCA+GGG + chr2.2:62021285-62021304 MS.gene002990:CDS 45.0%
GTTGATCCTGCTCACTTCAA+GGG + chr2.2:62020951-62020970 MS.gene002990:CDS 45.0%
TAGTATGGGTATCCAGAGTG+TGG + chr2.2:62022097-62022116 MS.gene002990:intron 45.0%
TATGCAGGCACAGCCAAAAA+AGG + chr2.2:62021754-62021773 MS.gene002990:intron 45.0%
TGTCAAGTAAAGAACCGGAC+CGG - chr2.2:62022974-62022993 None:intergenic 45.0%
TGTTCAGCAATAGCAGACTC+AGG + chr2.2:62021284-62021303 MS.gene002990:CDS 45.0%
TGTTGATCCTGCTCACTTCA+AGG + chr2.2:62020950-62020969 MS.gene002990:CDS 45.0%
TTGAACCAATTGGGAGATGC+CGG + chr2.2:62022932-62022951 MS.gene002990:intron 45.0%
TTGAGTGTAACCACATGGTG+TGG + chr2.2:62021954-62021973 MS.gene002990:intron 45.0%
TTTGTCGCGGCTAAGTTTGA+TGG + chr2.2:62020678-62020697 MS.gene002990:CDS 45.0%
! AACCAAGCAATTGGAGCATC+TGG + chr2.2:62021499-62021518 MS.gene002990:CDS 45.0%
! AGTAGCATCTTGATGACCAC+CGG - chr2.2:62022147-62022166 None:intergenic 45.0%
! CAATATCCTTTTCGCGTCAC+AGG - chr2.2:62020993-62021012 None:intergenic 45.0%
! CAGACCGATAGAGTATCATC+CGG + chr2.2:62022125-62022144 MS.gene002990:CDS 45.0%
! CTTCGACCCCAACAAGTTTT+TGG - chr2.2:62019811-62019830 None:intergenic 45.0%
! GATGATTGTCCCAATGGGTT+AGG - chr2.2:62022355-62022374 None:intergenic 45.0%
! GGGAAACAAGTTGAATGTGG+TGG + chr2.2:62019686-62019705 MS.gene002990:CDS 45.0%
! TATGGTACTGGAGCAGTTTC+TGG + chr2.2:62020478-62020497 MS.gene002990:CDS 45.0%
! TGCACATTTGATGGCACTCA+TGG + chr2.2:62021797-62021816 MS.gene002990:CDS 45.0%
! TTGATGGCACTCATGGTGTT+AGG + chr2.2:62021804-62021823 MS.gene002990:CDS 45.0%
!! AATGATGGGTTGCGTAGGAT+TGG + chr2.2:62019762-62019781 MS.gene002990:CDS 45.0%
!! ATTATACCTCTTCTGGGGCA+AGG - chr2.2:62022444-62022463 None:intergenic 45.0%
!! CAAAAACTTGTTGGGGTCGA+AGG + chr2.2:62019809-62019828 MS.gene002990:CDS 45.0%
!! CAAGGAGGTGAGCTTGTTTT+TGG + chr2.2:62020924-62020943 MS.gene002990:CDS 45.0%
!! TACCAAATGATGGGTTGCGT+AGG + chr2.2:62019757-62019776 MS.gene002990:CDS 45.0%
!! TTGGCTTGTAGGTACTTGAC+TGG - chr2.2:62020184-62020203 None:intergenic 45.0%
!!! AATTGGGAGATGCCGGTTTT+TGG + chr2.2:62022939-62022958 MS.gene002990:intron 45.0%
!!! AGGAGGTATTTTTCTGCCAC+AGG + chr2.2:62020826-62020845 MS.gene002990:intron 45.0%
!! ACTTATTTAAAAAATAAATA+AGG + chr2.2:62022834-62022853 MS.gene002990:intron 5.0%
AAGAACATCCTTGGAGGAGC+TGG + chr2.2:62019873-62019892 MS.gene002990:CDS 50.0%
AGACTCAGGGACGTCTTTGT+TGG + chr2.2:62021298-62021317 MS.gene002990:CDS 50.0%
AGCTCCTCCAAGGATGTTCT+TGG - chr2.2:62019874-62019893 None:intergenic 50.0%
ATTGAAGCGACTAGAGAGCC+TGG + chr2.2:62020648-62020667 MS.gene002990:CDS 50.0%
ATTTGACCTTGCCCCAGAAG+AGG + chr2.2:62022435-62022454 MS.gene002990:CDS 50.0%
CGAAGGGTTGTGGATCATCA+TGG + chr2.2:62019826-62019845 MS.gene002990:CDS 50.0%
CGACACCGACACATAGATAC+CGG + chr2.2:62021906-62021925 MS.gene002990:intron 50.0%
CGATGTAGTTGTGAAGGACG+TGG + chr2.2:62020531-62020550 MS.gene002990:CDS 50.0%
CTCCAGATGCTCCAATTGCT+TGG - chr2.2:62021504-62021523 None:intergenic 50.0%
GACGCGAAAAGGATATTGGC+AGG + chr2.2:62020995-62021014 MS.gene002990:CDS 50.0%
GAGACCGGTCATGGTTCAAT+TGG + chr2.2:62022788-62022807 MS.gene002990:intron 50.0%
GCCCCATGAAGATATCTCCA+AGG - chr2.2:62023097-62023116 None:intergenic 50.0%
GCCTGGACTTACATTTGTCG+CGG + chr2.2:62020665-62020684 MS.gene002990:CDS 50.0%
GGTTCCAAGAACATCCTTGG+AGG + chr2.2:62019867-62019886 MS.gene002990:CDS 50.0%
GTCTTTGTTGGCAGGTCCAA+CGG + chr2.2:62021310-62021329 MS.gene002990:CDS 50.0%
TATGCGAGATGGCTGTTGTC+TGG + chr2.2:62022174-62022193 MS.gene002990:CDS 50.0%
TATGGGTATCCAGAGTGTGG+TGG + chr2.2:62022100-62022119 MS.gene002990:CDS 50.0%
TCACCTCCTTGCTCCTCATT+TGG - chr2.2:62020915-62020934 None:intergenic 50.0%
! ACCGATAGAGTATCATCCGG+TGG + chr2.2:62022128-62022147 MS.gene002990:CDS 50.0%
! CGGCTGGTTCAACCAAAAAC+CGG - chr2.2:62022954-62022973 None:intergenic 50.0%
!! AGTCTGAGGAGGAGTACCAA+TGG - chr2.2:62019958-62019977 None:intergenic 50.0%
!!! CGGTTTTTGGTTGAACCAGC+CGG + chr2.2:62022952-62022971 MS.gene002990:intron 50.0%
!!! GGAGGTGAGCTTGTTTTTGG+TGG + chr2.2:62020927-62020946 MS.gene002990:CDS 50.0%
AAGTAAAGAACCGGACCGGC+TGG - chr2.2:62022970-62022989 None:intergenic 55.0%
CACTGGCACACATCAGACAC+CGG + chr2.2:62021990-62022009 MS.gene002990:intron 55.0%
GCCGCGACAAATGTAAGTCC+AGG - chr2.2:62020669-62020688 None:intergenic 55.0%
GCTGCAGCCCAATGCATTAG+TGG + chr2.2:62022667-62022686 MS.gene002990:CDS 55.0%
TACGTGCCTGTGACGCGAAA+AGG + chr2.2:62020984-62021003 MS.gene002990:CDS 55.0%
TCAGGGACGTCTTTGTTGGC+AGG + chr2.2:62021302-62021321 MS.gene002990:CDS 55.0%
TGTTCGCCCTTGAAGTGAGC+AGG - chr2.2:62020960-62020979 None:intergenic 55.0%
TTGGATGTTCCTCCTCCACG+TGG + chr2.2:62022700-62022719 MS.gene002990:CDS 55.0%
TTGTTGGGGTCGAAGGGTTG+TGG + chr2.2:62019816-62019835 MS.gene002990:CDS 55.0%
TTTGGTTGAACCAGCCGGTC+CGG + chr2.2:62022957-62022976 MS.gene002990:intron 55.0%
AACCATGACCGGTCTCACCC+GGG - chr2.2:62022784-62022803 None:intergenic 60.0%
ATGTACCAGAGTGGGCCACG+TGG - chr2.2:62022718-62022737 None:intergenic 60.0%
CAGCTTCTCCAGCTCCTCCA+AGG - chr2.2:62019884-62019903 None:intergenic 60.0%
CGGTCTGTTCCACCACACTC+TGG - chr2.2:62022112-62022131 None:intergenic 60.0%
CTAGAGATCCCGGGTGAGAC+CGG + chr2.2:62022773-62022792 MS.gene002990:intron 60.0%
CTCACCCGGGATCTCTAGTG+TGG - chr2.2:62022771-62022790 None:intergenic 60.0%
GAACCATGACCGGTCTCACC+CGG - chr2.2:62022785-62022804 None:intergenic 60.0%
ATCCCGGGTGAGACCGGTCA+TGG + chr2.2:62022779-62022798 MS.gene002990:intron 65.0%
TACCAGAGTGGGCCACGTGG+AGG - chr2.2:62022715-62022734 None:intergenic 65.0%
CAGAGTGGGCCACGTGGAGG+AGG - chr2.2:62022712-62022731 None:intergenic 70.0%
CTCCTCCACGTGGCCCACTC+TGG + chr2.2:62022710-62022729 MS.gene002990:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 62019684 62023175 62019684 ID=MS.gene002990
chr2.2 mRNA 62019684 62023175 62019684 ID=MS.gene002990.t1;Parent=MS.gene002990
chr2.2 exon 62019684 62020043 62019684 ID=MS.gene002990.t1.exon1;Parent=MS.gene002990.t1
chr2.2 CDS 62019684 62020043 62019684 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62020146 62020206 62020146 ID=MS.gene002990.t1.exon2;Parent=MS.gene002990.t1
chr2.2 CDS 62020146 62020206 62020146 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62020458 62020552 62020458 ID=MS.gene002990.t1.exon3;Parent=MS.gene002990.t1
chr2.2 CDS 62020458 62020552 62020458 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62020642 62020754 62020642 ID=MS.gene002990.t1.exon4;Parent=MS.gene002990.t1
chr2.2 CDS 62020642 62020754 62020642 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62020848 62021016 62020848 ID=MS.gene002990.t1.exon5;Parent=MS.gene002990.t1
chr2.2 CDS 62020848 62021016 62020848 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62021118 62021157 62021118 ID=MS.gene002990.t1.exon6;Parent=MS.gene002990.t1
chr2.2 CDS 62021118 62021157 62021118 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62021267 62021331 62021267 ID=MS.gene002990.t1.exon7;Parent=MS.gene002990.t1
chr2.2 CDS 62021267 62021331 62021267 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62021481 62021594 62021481 ID=MS.gene002990.t1.exon8;Parent=MS.gene002990.t1
chr2.2 CDS 62021481 62021594 62021481 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62021761 62021825 62021761 ID=MS.gene002990.t1.exon9;Parent=MS.gene002990.t1
chr2.2 CDS 62021761 62021825 62021761 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62022100 62022256 62022100 ID=MS.gene002990.t1.exon10;Parent=MS.gene002990.t1
chr2.2 CDS 62022100 62022256 62022100 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62022337 62022456 62022337 ID=MS.gene002990.t1.exon11;Parent=MS.gene002990.t1
chr2.2 CDS 62022337 62022456 62022337 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62022643 62022731 62022643 ID=MS.gene002990.t1.exon12;Parent=MS.gene002990.t1
chr2.2 CDS 62022643 62022731 62022643 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
chr2.2 exon 62023091 62023175 62023091 ID=MS.gene002990.t1.exon13;Parent=MS.gene002990.t1
chr2.2 CDS 62023091 62023175 62023091 ID=cds.MS.gene002990.t1;Parent=MS.gene002990.t1
Gene Sequence

>MS.gene002990

ATGGGAAACAAGTTGAATGTGGTGGTGTTAAGTTTGTGTTTGTGGACCCTATTGTTTTCTTTGGTTTCTTGTGTACCAAATGATGGGTTGCGTAGGATTGGTTTGAAAAAGAACAAATTGGAACCCAAAAACTTGTTGGGGTCGAAGGGTTGTGGATCATCATGGTCTTCCATTAAGAAGTATGGTTCCAAGAACATCCTTGGAGGAGCTGGAGAAGCTGATGTTGTTGCATTGAAGAATTACTTGGATGCTCAGTACTATGGTGAAATATCCATTGGTACTCCTCCTCAGACTTTTACTGTGATTTTCGATACTGGTAGCTCTAATACCTGGGTGCCATCAGTTAAATGTTACTTCTCGGTGAGTTTTATTTTAATCCATATGATGAATATGTATCTGGTTTATATATTTATTTATATTCCGATTTTGGCTTTGTTAATGTGTTTTTGCATGTTTGTGCAGCTTGCATGTTTAGTCCATGCTAAGTACAAGTCTAGCCAGTCAAGTACCTACAAGCCAAATGGTTTGTCTTCTTCTTTTGTTTTTTGAGGATCTGCCTTTGTTTGTTTCATTTCATGTTTCTATAGAACTACTACGCTGCATAAAAGAATTTAAAAAATTGTTGCGAATACCAATGTTTTGTTTCTGAAATTTTGTAATTTGGTTTGGAATAACACGGTTTCATGATTTAAGAACTCATATTTGTTTATTTCTTTGTTTGTTGTTCGAAGTGATTTTTATTTTTTTCACACGAGAGTTTGTCTTGTTATTTAGGGACTCATGCTGCAATTCAGTATGGTACTGGAGCAGTTTCTGGCTTCTTTAGCTACGACAATGTAAAAGTTGGCGATGTAGTTGTGAAGGACGTGGTAATGTTGATTTTCATTCCATATTTTGTTTCCTTCAGACGAATAATATGTTGATCGATCTTGAGTATATATTTTTTTATTCCCTTCAGGAATTTATTGAAGCGACTAGAGAGCCTGGACTTACATTTGTCGCGGCTAAGTTTGATGGTTTGCTTGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGTCCCAATATGGTATCTGTGCACATTTAATCATTAATTTATCATTTTGTTATTGTTTTTTTATTTCCATGCCATTACTCATTAGGAGGTATTTTTCTGCCACAGGTACAAAATGGTTAAACAAGGTCTTGTTAAGGATCCTGTATTTTCATTTTGGCTCAATCGTAATCCAAATGAGGAGCAAGGAGGTGAGCTTGTTTTTGGTGGTGTTGATCCTGCTCACTTCAAGGGCGAACATACTTACGTGCCTGTGACGCGAAAAGGATATTGGCAGGTTGGCCTGACTGTCAACATGTTTATTCATTATGCTATGCTTATAATGCATTTTTTACAATATACTTGTGTTTGCTAAGTTCATTTGTATTTTCTGGATAGTTTGCAATGGGAGATGTACTTATTGATGGAAAACCCACTGGTAAATATTTGTTTGTTTCTTCAATGACACGATATTATTGACAGCACTTTGTTTGATGCTTCATGGTTTTTATTCATTGATACTGACTTCAAAATACTTCGTCATTCAGGATATTGTGCTAATGATTGTTCAGCAATAGCAGACTCAGGGACGTCTTTGTTGGCAGGTCCAACGGTATGAATAAATGCTTGAAGATTTAGGCCGCTATAGATTTTTATTTCTGACTAGAGTTTATGACCTGGAAAGAATTAATAATGCTTTTGTCATTGAACCTTTGAGTAGCTTATTTGTATGACCTAATATACTTGTTTTTGCTTGTTTAGACTGTAATTACTATGATAAACCAAGCAATTGGAGCATCTGGAGTTTACAGTCAAGAATGCAGGACTGTTGTTGATCAATATGGACATTCAATTTTGCAATTGCTCGTGGCTGAAGTAAGTAAATTACTCTCCATAGTTTGGTTGATTAGGTTCTTGACCATTGTCATGAGTGTTGACTGTTGAGTGATTGTTCATTATTATATAGTTGACTGTTGAGCATATGAGTGATTGTTGACTGTTGACTGTTGAATTTTCTTATGGTTTTCACTTGGTTATGCAGGCACAGCCAAAAAAGGTCTGCTCCCAAATTGGGCTGTGCACATTTGATGGCACTCATGGTGTTAGGTAAGACCCAAAGATTCCATTGTTAACTTGAAAACCCTACTGTGTCTAATGCTATGAAGTACTGACATAGACACTGGATACGACACCGACACATAGATACCGGTCATAATTTGAAAGAATAAAAGTGATTGAGTGTAACCACATGGTGTGGAATCATTGTTTGACACTGGCACACATCAGACACCGGACATGCATTTATTTTCAAGCCTCAGTGCTGCATAACTCTAATATACTGTGATTGCCATTTTATTAAATCTTTCATTGTTTCCTCTAGTATGGGTATCCAGAGTGTGGTGGAACAGACCGATAGAGTATCATCCGGTGGTCATCAAGATGCTACTTGTTCTGTATGCGAGATGGCTGTTGTCTGGATGCAGAACCAGCTGAAGCAGAATCAAACAGAAGAGCGGATAATAAACTACGCCGATTCGGTACTTTAGTTTCAAATTTGCTATTTGAGTTCTCAAATCCTGCTTCCTCTCTTAACTATAGCCTTGTGATGATATTGCAGCTTTGTGACAAAATGCCTAACCCATTGGGACAATCATCTGTTGATTGTGCAAAGATCTCTTCCATGCCTAAAGTTTCCTTCACCATTGGTGGCAAAAAATTTGACCTTGCCCCAGAAGAGGTATAATTTCAAATCTATATTTACTTTTGAGAAGGCTGATCTGATCATTGACCGTGTTTTATTTTCATGAAGAATTTGCCTTGGATTTGTTGCTTTGTGAATTGAGTAACTTTTCTACGCATGTAATGGCTGCTTTGTTCCATGTTTATCTGTTTCCCTGATTCAATTTCCATTTGCTTTCTTCAGTACATATTGAAGGTGGGTGAAGGTGCTGCAGCCCAATGCATTAGTGGCTTTACTGCTTTGGATGTTCCTCCTCCACGTGGCCCACTCTGGTACATCAAAGTTTAATTTAATTAATGTTTTCAAAACCACACTAGAGATCCCGGGTGAGACCGGTCATGGTTCAATTGGTTGAATCGGATGATTAACAAATAACTTATTTAAAAAATAAATAAGGAAGGAAAAAATGAACCAGTAGAACCCAGTTCAATCTGGTTAAATTTAATTCCAAGAGACTGAAAACCAACTGTTGTTGAACCAATTGGGAGATGCCGGTTTTTGGTTGAACCAGCCGGTCCGGTTCTTTACTTGACACATACACTATGACATTTGTTGACCCAAAAAAGAAAACAAAAACACACTATGCATTTAGTTTGATAATAATCACTTAATGGTATCTTTATAAATGCAGGATCCTTGGAGATATCTTCATGGGGCGCTATCATACAGTCTTTGACTATGGTAAACTCAGAGTTGGATTTGCCGAAGCAGCATAG
Protein sequence

>MS.gene002990.t1

MGNKLNVVVLSLCLWTLLFSLVSCVPNDGLRRIGLKKNKLEPKNLLGSKGCGSSWSSIKKYGSKNILGGAGEADVVALKNYLDAQYYGEISIGTPPQTFTVIFDTGSSNTWVPSVKCYFSLACLVHAKYKSSQSSTYKPNGTHAAIQYGTGAVSGFFSYDNVKVGDVVVKDVEFIEATREPGLTFVAAKFDGLLGLGFQEISVGNAVPIWYKMVKQGLVKDPVFSFWLNRNPNEEQGGELVFGGVDPAHFKGEHTYVPVTRKGYWQFAMGDVLIDGKPTGYCANDCSAIADSGTSLLAGPTTVITMINQAIGASGVYSQECRTVVDQYGHSILQLLVAEAQPKKVCSQIGLCTFDGTHGVSMGIQSVVEQTDRVSSGGHQDATCSVCEMAVVWMQNQLKQNQTEERIINYADSLCDKMPNPLGQSSVDCAKISSMPKVSFTIGGKKFDLAPEEYILKVGEGAAAQCISGFTALDVPPPRGPLWILGDIFMGRYHTVFDYGKLRVGFAEAA