Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37999.t1 | XP_003617895.1 | 98.6 | 357 | 5 | 0 | 1 | 357 | 1 | 357 | 4.00E-197 | 697.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37999.t1 | P46256 | 96.9 | 357 | 11 | 0 | 1 | 357 | 1 | 357 | 1.1e-195 | 683.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37999.t1 | G7K4T4 | 98.6 | 357 | 5 | 0 | 1 | 357 | 1 | 357 | 2.9e-197 | 697.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene37999 | 0.800989 | 1.11E-48 | -1.69E-46 |
| MS.gene049171 | MS.gene37999 | 0.927213 | 1.61E-91 | -1.69E-46 |
| MS.gene049173 | MS.gene37999 | 0.832551 | 8.86E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene37999 | 0.850818 | 1.33E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene37999 | 0.881504 | 2.27E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene37999 | 0.817656 | 2.95E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene37999 | -0.832555 | 8.84E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene37999 | 0.926648 | 3.51E-91 | -1.69E-46 |
| MS.gene049320 | MS.gene37999 | 0.922874 | 5.57E-89 | -1.69E-46 |
| MS.gene04939 | MS.gene37999 | 0.829999 | 3.76E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene37999 | 0.868833 | 4.87E-66 | -1.69E-46 |
| MS.gene049633 | MS.gene37999 | 0.875562 | 2.79E-68 | -1.69E-46 |
| MS.gene049805 | MS.gene37999 | 0.824723 | 6.92E-54 | -1.69E-46 |
| MS.gene049865 | MS.gene37999 | 0.808414 | 3.13E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene37999 | 0.885308 | 9.09E-72 | -1.69E-46 |
| MS.gene050163 | MS.gene37999 | 0.88386 | 3.14E-71 | -1.69E-46 |
| MS.gene050165 | MS.gene37999 | 0.882321 | 1.15E-70 | -1.69E-46 |
| MS.gene050170 | MS.gene37999 | 0.876602 | 1.23E-68 | -1.69E-46 |
| MS.gene050323 | MS.gene37999 | 0.876328 | 1.52E-68 | -1.69E-46 |
| MS.gene050333 | MS.gene37999 | 0.860101 | 2.61E-63 | -1.69E-46 |
| MS.gene050444 | MS.gene37999 | 0.844287 | 8.30E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene37999 | 0.890501 | 9.30E-74 | -1.69E-46 |
| MS.gene050504 | MS.gene37999 | 0.917332 | 6.04E-86 | -1.69E-46 |
| MS.gene050518 | MS.gene37999 | 0.889959 | 1.52E-73 | -1.69E-46 |
| MS.gene050538 | MS.gene37999 | 0.817992 | 2.47E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene37999 | 0.910343 | 2.08E-82 | -1.69E-46 |
| MS.gene050593 | MS.gene37999 | 0.808646 | 2.80E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene37999 | 0.922856 | 5.70E-89 | -1.69E-46 |
| MS.gene050675 | MS.gene37999 | 0.886828 | 2.43E-72 | -1.69E-46 |
| MS.gene050699 | MS.gene37999 | 0.943671 | 7.90E-103 | -1.69E-46 |
| MS.gene050747 | MS.gene37999 | 0.843654 | 1.23E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene37999 | 0.894295 | 2.82E-75 | -1.69E-46 |
| MS.gene05080 | MS.gene37999 | 0.849518 | 3.07E-60 | -1.69E-46 |
| MS.gene05081 | MS.gene37999 | 0.823606 | 1.27E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene37999 | 0.855249 | 7.16E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene37999 | 0.850388 | 1.75E-60 | -1.69E-46 |
| MS.gene050876 | MS.gene37999 | 0.850611 | 1.52E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene37999 | 0.841633 | 4.22E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene37999 | 0.839437 | 1.59E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene37999 | 0.908667 | 1.33E-81 | -1.69E-46 |
| MS.gene05100 | MS.gene37999 | 0.855861 | 4.75E-62 | -1.69E-46 |
| MS.gene051317 | MS.gene37999 | 0.895856 | 6.44E-76 | -1.69E-46 |
| MS.gene051336 | MS.gene37999 | 0.832355 | 9.91E-56 | -1.69E-46 |
| MS.gene051364 | MS.gene37999 | -0.82654 | 2.57E-54 | -1.69E-46 |
| MS.gene051366 | MS.gene37999 | -0.824182 | 9.27E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene37999 | 0.88192 | 1.61E-70 | -1.69E-46 |
| MS.gene051651 | MS.gene37999 | -0.828457 | 8.90E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene37999 | 0.801714 | 7.91E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene37999 | 0.895101 | 1.32E-75 | -1.69E-46 |
| MS.gene051838 | MS.gene37999 | 0.839714 | 1.34E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene37999 | 0.8417 | 4.05E-58 | -1.69E-46 |
| MS.gene051949 | MS.gene37999 | 0.852835 | 3.56E-61 | -1.69E-46 |
| MS.gene052129 | MS.gene37999 | -0.801966 | 7.02E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene37999 | 0.844021 | 9.78E-59 | -1.69E-46 |
| MS.gene052271 | MS.gene37999 | 0.832345 | 9.97E-56 | -1.69E-46 |
| MS.gene052379 | MS.gene37999 | 0.80199 | 6.94E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene37999 | 0.858527 | 7.75E-63 | -1.69E-46 |
| MS.gene052486 | MS.gene37999 | 0.870762 | 1.14E-66 | -1.69E-46 |
| MS.gene052501 | MS.gene37999 | 0.812122 | 4.97E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene37999 | 0.88449 | 1.83E-71 | -1.69E-46 |
| MS.gene052504 | MS.gene37999 | 0.823523 | 1.32E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene37999 | 0.86401 | 1.65E-64 | -1.69E-46 |
| MS.gene052615 | MS.gene37999 | 0.870003 | 2.03E-66 | -1.69E-46 |
| MS.gene052820 | MS.gene37999 | 0.811179 | 7.97E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene37999 | 0.874249 | 7.83E-68 | -1.69E-46 |
| MS.gene052823 | MS.gene37999 | 0.877948 | 4.17E-69 | -1.69E-46 |
| MS.gene052825 | MS.gene37999 | 0.87702 | 8.78E-69 | -1.69E-46 |
| MS.gene052870 | MS.gene37999 | 0.819389 | 1.19E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene37999 | 0.846054 | 2.76E-59 | -1.69E-46 |
| MS.gene052916 | MS.gene37999 | 0.82472 | 6.93E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene37999 | 0.832414 | 9.58E-56 | -1.69E-46 |
| MS.gene053117 | MS.gene37999 | 0.800587 | 1.34E-48 | -1.69E-46 |
| MS.gene053203 | MS.gene37999 | 0.870896 | 1.03E-66 | -1.69E-46 |
| MS.gene053207 | MS.gene37999 | 0.835594 | 1.53E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene37999 | 0.891338 | 4.35E-74 | -1.69E-46 |
| MS.gene053286 | MS.gene37999 | 0.889875 | 1.64E-73 | -1.69E-46 |
| MS.gene053420 | MS.gene37999 | -0.806884 | 6.62E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene37999 | 0.843458 | 1.38E-58 | -1.69E-46 |
| MS.gene053479 | MS.gene37999 | 0.858258 | 9.32E-63 | -1.69E-46 |
| MS.gene053480 | MS.gene37999 | 0.893099 | 8.61E-75 | -1.69E-46 |
| MS.gene053561 | MS.gene37999 | -0.802152 | 6.42E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene37999 | 0.846223 | 2.49E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene37999 | 0.884 | 2.78E-71 | -1.69E-46 |
| MS.gene053824 | MS.gene37999 | 0.883323 | 4.94E-71 | -1.69E-46 |
| MS.gene053916 | MS.gene37999 | 0.845243 | 4.59E-59 | -1.69E-46 |
| MS.gene054343 | MS.gene37999 | 0.826507 | 2.61E-54 | -1.69E-46 |
| MS.gene054344 | MS.gene37999 | 0.865602 | 5.24E-65 | -1.69E-46 |
| MS.gene054408 | MS.gene37999 | 0.834028 | 3.80E-56 | -1.69E-46 |
| MS.gene054555 | MS.gene37999 | -0.819754 | 9.84E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene37999 | 0.841466 | 4.67E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene37999 | 0.889859 | 1.66E-73 | -1.69E-46 |
| MS.gene054642 | MS.gene37999 | 0.902497 | 9.13E-79 | -1.69E-46 |
| MS.gene054706 | MS.gene37999 | -0.811715 | 6.09E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene37999 | 0.894624 | 2.07E-75 | -1.69E-46 |
| MS.gene054954 | MS.gene37999 | 0.92146 | 3.48E-88 | -1.69E-46 |
| MS.gene054959 | MS.gene37999 | -0.841176 | 5.57E-58 | -1.69E-46 |
| MS.gene055134 | MS.gene37999 | -0.813814 | 2.12E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene37999 | -0.819634 | 1.05E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene37999 | 0.865658 | 5.03E-65 | -1.69E-46 |
| MS.gene055212 | MS.gene37999 | 0.801399 | 9.17E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene37999 | 0.81519 | 1.05E-51 | -1.69E-46 |
| MS.gene055251 | MS.gene37999 | -0.829103 | 6.21E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene37999 | 0.818349 | 2.05E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene37999 | 0.929151 | 1.05E-92 | -1.69E-46 |
| MS.gene055502 | MS.gene37999 | 0.919141 | 6.52E-87 | -1.69E-46 |
| MS.gene055577 | MS.gene37999 | 0.896591 | 3.18E-76 | -1.69E-46 |
| MS.gene055722 | MS.gene37999 | 0.839651 | 1.39E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene37999 | 0.881238 | 2.83E-70 | -1.69E-46 |
| MS.gene055750 | MS.gene37999 | 0.875493 | 2.95E-68 | -1.69E-46 |
| MS.gene055751 | MS.gene37999 | 0.887534 | 1.31E-72 | -1.69E-46 |
| MS.gene055776 | MS.gene37999 | 0.876264 | 1.60E-68 | -1.69E-46 |
| MS.gene05589 | MS.gene37999 | 0.889581 | 2.13E-73 | -1.69E-46 |
| MS.gene055941 | MS.gene37999 | 0.859793 | 3.23E-63 | -1.69E-46 |
| MS.gene055942 | MS.gene37999 | -0.825105 | 5.62E-54 | -1.69E-46 |
| MS.gene055956 | MS.gene37999 | -0.842071 | 3.23E-58 | -1.69E-46 |
| MS.gene056046 | MS.gene37999 | 0.817631 | 2.98E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene37999 | 0.8109 | 9.16E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene37999 | 0.859155 | 5.03E-63 | -1.69E-46 |
| MS.gene056409 | MS.gene37999 | 0.812158 | 4.88E-51 | -1.69E-46 |
| MS.gene056446 | MS.gene37999 | 0.809251 | 2.08E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene37999 | 0.916927 | 9.87E-86 | -1.69E-46 |
| MS.gene056510 | MS.gene37999 | 0.892164 | 2.04E-74 | -1.69E-46 |
| MS.gene056550 | MS.gene37999 | -0.810071 | 1.38E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene37999 | 0.829606 | 4.69E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene37999 | 0.921895 | 1.99E-88 | -1.69E-46 |
| MS.gene056692 | MS.gene37999 | 0.881656 | 2.00E-70 | -1.69E-46 |
| MS.gene056761 | MS.gene37999 | -0.806628 | 7.50E-50 | -1.69E-46 |
| MS.gene056898 | MS.gene37999 | 0.824336 | 8.53E-54 | -1.69E-46 |
| MS.gene056946 | MS.gene37999 | 0.806486 | 8.04E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene37999 | 0.844434 | 7.58E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene37999 | 0.811429 | 7.03E-51 | -1.69E-46 |
| MS.gene057196 | MS.gene37999 | 0.828464 | 8.86E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene37999 | 0.830207 | 3.35E-55 | -1.69E-46 |
| MS.gene057332 | MS.gene37999 | 0.850423 | 1.71E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene37999 | 0.85347 | 2.34E-61 | -1.69E-46 |
| MS.gene057658 | MS.gene37999 | 0.868068 | 8.59E-66 | -1.69E-46 |
| MS.gene057831 | MS.gene37999 | 0.865285 | 6.60E-65 | -1.69E-46 |
| MS.gene057857 | MS.gene37999 | 0.802276 | 6.06E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene37999 | 0.808262 | 3.38E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene37999 | -0.862313 | 5.54E-64 | -1.69E-46 |
| MS.gene058338 | MS.gene37999 | 0.854097 | 1.54E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene37999 | 0.859817 | 3.18E-63 | -1.69E-46 |
| MS.gene058382 | MS.gene37999 | -0.816421 | 5.58E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene37999 | 0.938427 | 6.85E-99 | -1.69E-46 |
| MS.gene058544 | MS.gene37999 | 0.893523 | 5.81E-75 | -1.69E-46 |
| MS.gene058603 | MS.gene37999 | -0.808902 | 2.46E-50 | -1.69E-46 |
| MS.gene058719 | MS.gene37999 | 0.80261 | 5.17E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene37999 | 0.880072 | 7.42E-70 | -1.69E-46 |
| MS.gene058773 | MS.gene37999 | 0.870656 | 1.24E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene37999 | 0.895031 | 1.41E-75 | -1.69E-46 |
| MS.gene059022 | MS.gene37999 | 0.923392 | 2.82E-89 | -1.69E-46 |
| MS.gene059023 | MS.gene37999 | 0.916714 | 1.28E-85 | -1.69E-46 |
| MS.gene059029 | MS.gene37999 | 0.816916 | 4.32E-52 | -1.69E-46 |
| MS.gene05912 | MS.gene37999 | 0.81909 | 1.39E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene37999 | 0.827396 | 1.60E-54 | -1.69E-46 |
| MS.gene05914 | MS.gene37999 | 0.858007 | 1.11E-62 | -1.69E-46 |
| MS.gene05934 | MS.gene37999 | 0.826894 | 2.11E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene37999 | 0.815346 | 9.69E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene37999 | 0.94154 | 3.48E-101 | -1.69E-46 |
| MS.gene059718 | MS.gene37999 | 0.89318 | 7.99E-75 | -1.69E-46 |
| MS.gene059756 | MS.gene37999 | 0.903361 | 3.75E-79 | -1.69E-46 |
| MS.gene059770 | MS.gene37999 | -0.821656 | 3.60E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene37999 | 0.822205 | 2.68E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene37999 | 0.854194 | 1.45E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene37999 | 0.890262 | 1.15E-73 | -1.69E-46 |
| MS.gene059902 | MS.gene37999 | 0.836723 | 7.92E-57 | -1.69E-46 |
| MS.gene06000 | MS.gene37999 | 0.843575 | 1.29E-58 | -1.69E-46 |
| MS.gene060337 | MS.gene37999 | -0.812536 | 4.04E-51 | -1.69E-46 |
| MS.gene060341 | MS.gene37999 | 0.808186 | 3.51E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene37999 | 0.899518 | 1.83E-77 | -1.69E-46 |
| MS.gene060728 | MS.gene37999 | 0.827158 | 1.83E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene37999 | 0.884825 | 1.38E-71 | -1.69E-46 |
| MS.gene060778 | MS.gene37999 | 0.846699 | 1.84E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene37999 | 0.913979 | 3.28E-84 | -1.69E-46 |
| MS.gene060823 | MS.gene37999 | -0.802227 | 6.20E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene37999 | 0.824542 | 7.63E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene37999 | 0.860852 | 1.55E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene37999 | 0.904406 | 1.27E-79 | -1.69E-46 |
| MS.gene061044 | MS.gene37999 | -0.82407 | 9.85E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene37999 | 0.887847 | 9.96E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37999 | MS.gene50712 | PPI |
| MS.gene003645 | MS.gene37999 | PPI |
| MS.gene23352 | MS.gene37999 | PPI |
| MS.gene37999 | MS.gene50709 | PPI |
| MS.gene23350 | MS.gene37999 | PPI |
| MS.gene37999 | MS.gene062923 | PPI |
| MS.gene062925 | MS.gene37999 | PPI |
| MS.gene003647 | MS.gene37999 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37999.t1 | MTR_5g096670 | 98.599 | 357 | 5 | 0 | 1 | 357 | 1 | 357 | 0.0 | 723 |
| MS.gene37999.t1 | MTR_5g069055 | 78.212 | 358 | 77 | 1 | 1 | 357 | 1 | 358 | 0.0 | 582 |
| MS.gene37999.t1 | MTR_1g061050 | 77.374 | 358 | 80 | 1 | 1 | 357 | 1 | 358 | 0.0 | 570 |
| MS.gene37999.t1 | MTR_5g069050 | 74.212 | 349 | 74 | 2 | 10 | 357 | 51 | 384 | 0.0 | 526 |
| MS.gene37999.t1 | MTR_4g057670 | 57.507 | 353 | 146 | 3 | 6 | 357 | 51 | 400 | 2.64e-138 | 399 |
| MS.gene37999.t1 | MTR_4g071860 | 57.507 | 353 | 146 | 3 | 6 | 357 | 51 | 400 | 3.36e-138 | 399 |
| MS.gene37999.t1 | MTR_1g109200 | 55.840 | 351 | 151 | 3 | 8 | 357 | 44 | 391 | 4.92e-136 | 393 |
| MS.gene37999.t1 | MTR_4g071880 | 51.404 | 356 | 151 | 5 | 6 | 357 | 49 | 386 | 2.61e-115 | 340 |
| MS.gene37999.t1 | MTR_7g103920 | 64.583 | 96 | 9 | 1 | 112 | 207 | 11 | 81 | 3.59e-34 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37999.t1 | AT4G26530 | 86.592 | 358 | 47 | 1 | 1 | 357 | 1 | 358 | 0.0 | 634 |
| MS.gene37999.t1 | AT4G26530 | 86.592 | 358 | 47 | 1 | 1 | 357 | 1 | 358 | 0.0 | 634 |
| MS.gene37999.t1 | AT4G26530 | 86.592 | 358 | 47 | 1 | 1 | 357 | 1 | 358 | 0.0 | 634 |
| MS.gene37999.t1 | AT2G36460 | 79.609 | 358 | 72 | 1 | 1 | 357 | 1 | 358 | 0.0 | 587 |
| MS.gene37999.t1 | AT3G52930 | 80.447 | 358 | 69 | 1 | 1 | 357 | 1 | 358 | 0.0 | 586 |
| MS.gene37999.t1 | AT4G26520 | 79.330 | 358 | 73 | 1 | 1 | 357 | 1 | 358 | 0.0 | 575 |
| MS.gene37999.t1 | AT4G26520 | 79.494 | 356 | 72 | 1 | 1 | 355 | 1 | 356 | 0.0 | 571 |
| MS.gene37999.t1 | AT4G26520 | 79.143 | 350 | 72 | 1 | 9 | 357 | 6 | 355 | 0.0 | 561 |
| MS.gene37999.t1 | AT4G26520 | 79.143 | 350 | 72 | 1 | 9 | 357 | 6 | 355 | 0.0 | 561 |
| MS.gene37999.t1 | AT5G03690 | 76.045 | 359 | 84 | 2 | 1 | 357 | 1 | 359 | 0.0 | 540 |
| MS.gene37999.t1 | AT5G03690 | 76.504 | 349 | 80 | 2 | 11 | 357 | 45 | 393 | 0.0 | 528 |
| MS.gene37999.t1 | AT2G36460 | 79.026 | 267 | 55 | 1 | 92 | 357 | 1 | 267 | 2.56e-155 | 437 |
| MS.gene37999.t1 | AT2G36460 | 79.026 | 267 | 55 | 1 | 92 | 357 | 1 | 267 | 2.56e-155 | 437 |
| MS.gene37999.t1 | AT5G03690 | 76.404 | 267 | 61 | 2 | 93 | 357 | 1 | 267 | 4.26e-139 | 396 |
| MS.gene37999.t1 | AT5G03690 | 76.404 | 267 | 61 | 2 | 93 | 357 | 1 | 267 | 4.26e-139 | 396 |
| MS.gene37999.t1 | AT4G38970 | 57.550 | 351 | 145 | 3 | 8 | 357 | 51 | 398 | 5.03e-139 | 400 |
| MS.gene37999.t1 | AT2G21330 | 56.695 | 351 | 148 | 3 | 8 | 357 | 52 | 399 | 4.72e-138 | 398 |
| MS.gene37999.t1 | AT2G01140 | 55.524 | 353 | 153 | 3 | 6 | 357 | 42 | 391 | 8.70e-136 | 392 |
| MS.gene37999.t1 | AT2G21330 | 54.701 | 351 | 145 | 4 | 8 | 357 | 52 | 389 | 3.39e-129 | 375 |
| MS.gene37999.t1 | AT4G38970 | 57.588 | 257 | 107 | 2 | 8 | 263 | 51 | 306 | 2.06e-99 | 299 |
| MS.gene37999.t1 | AT2G21330 | 56.031 | 257 | 111 | 2 | 8 | 263 | 52 | 307 | 2.47e-98 | 294 |
Find 121 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGCTCAAGAGGTATTTC+TGG | 0.277971 | 5.1:+77009910 | MS.gene37999:CDS |
| TGGACACTTTCGTTCTCATT+TGG | 0.289922 | 5.1:+77009830 | MS.gene37999:CDS |
| TGTTAAGGACTATAAGTATT+AGG | 0.314080 | 5.1:+77010015 | MS.gene37999:CDS |
| TATGGTGGTGGAAGTGGAAC+TGG | 0.319297 | 5.1:+77009971 | MS.gene37999:CDS |
| GCTTCCCATCGGAGGAATTC+TGG | 0.334173 | 5.1:-77008901 | None:intergenic |
| TTCTGAGAGTTTATATGTTA+AGG | 0.341237 | 5.1:+77010000 | MS.gene37999:CDS |
| GGACACTTTCGTTCTCATTT+GGG | 0.360833 | 5.1:+77009831 | MS.gene37999:CDS |
| ACAATCCCCGGTACCGCGGC+TGG | 0.363608 | 5.1:-77009728 | None:intergenic |
| TTCAGTGACAGCCGCGCATT+TGG | 0.365987 | 5.1:-77009245 | None:intergenic |
| GAGGCTACTCTTGGGAAATA+TGG | 0.368467 | 5.1:+77009953 | MS.gene37999:CDS |
| ATCATTCAGTGCCTTGTAAC+AGG | 0.375839 | 5.1:-77009281 | None:intergenic |
| GGATGACACCGGAGAGGTAT+TGG | 0.377053 | 5.1:-77008859 | None:intergenic |
| GCCAGGGGTGGCTATGTACT+TGG | 0.377454 | 5.1:-77008708 | None:intergenic |
| AACTGTCCCAGCCGCGGTAC+CGG | 0.386545 | 5.1:+77009721 | MS.gene37999:CDS |
| CCAGCAAAACGCACAGGGCT+TGG | 0.395404 | 5.1:+77009138 | MS.gene37999:CDS |
| CCCAAGAGTAGCCTCAGAAT+TGG | 0.401663 | 5.1:-77009945 | None:intergenic |
| CTGGTATGACATTGTTCTCT+TGG | 0.404955 | 5.1:-77008940 | None:intergenic |
| CCCTTGTCAACTTTGATGCC+TGG | 0.408200 | 5.1:-77008959 | None:intergenic |
| AAAATCTCAGGCTCAACAAT+AGG | 0.410743 | 5.1:-77009199 | None:intergenic |
| CACCCCTGGCAAGGGTATCT+TGG | 0.410912 | 5.1:+77008721 | MS.gene37999:CDS |
| GGGAAATATGGTGGTGGAAG+TGG | 0.413510 | 5.1:+77009965 | MS.gene37999:CDS |
| GTATGACATTGTTCTCTTGG+AGG | 0.415484 | 5.1:-77008937 | None:intergenic |
| CTCCGGCCTTGTAGTACTGC+TGG | 0.419506 | 5.1:-77009051 | None:intergenic |
| GCCAATTCTGAGGCTACTCT+TGG | 0.424506 | 5.1:+77009944 | MS.gene37999:CDS |
| GAACCTGGAGTAACCATGTT+AGG | 0.426285 | 5.1:-77009337 | None:intergenic |
| CTCCGGTGTCATCCTCTTTG+AGG | 0.427295 | 5.1:+77008868 | MS.gene37999:CDS |
| TCTTGGAGGATTTCAACAAA+AGG | 0.428975 | 5.1:-77008923 | None:intergenic |
| GATCCATCGGTTAAAATCTC+AGG | 0.430763 | 5.1:-77009211 | None:intergenic |
| CAAAGCATGTCGGCCTTTGT+TGG | 0.432883 | 5.1:+77008232 | None:intergenic |
| GATCAGCATGTCCTTCTTGA+AGG | 0.445985 | 5.1:+77009301 | MS.gene37999:CDS |
| GACAACTCAGAGGGCTCATT+GGG | 0.447754 | 5.1:-77009112 | None:intergenic |
| GAGAGGTATTGGAGTGCATT+GGG | 0.455590 | 5.1:-77008848 | None:intergenic |
| AGACAACTCAGAGGGCTCAT+TGG | 0.455669 | 5.1:-77009113 | None:intergenic |
| CCGGGGATTGTATTTCTGTC+AGG | 0.472014 | 5.1:+77009740 | MS.gene37999:CDS |
| ACTGTCCCAGCCGCGGTACC+GGG | 0.479499 | 5.1:+77009722 | MS.gene37999:CDS |
| AGCACACTCAAGACATGGGC+TGG | 0.480358 | 5.1:+77009869 | MS.gene37999:CDS |
| CTTGAGTACCGCACGCCACT+TGG | 0.484408 | 5.1:-77009083 | None:intergenic |
| GCCTTTGTTGGAAAGTATGC+AGG | 0.487704 | 5.1:+77008244 | MS.gene37999:CDS |
| AAGGGTGTTGTTGAATTAGC+TGG | 0.490593 | 5.1:+77008977 | MS.gene37999:CDS |
| GCTGCCAAGATACCCTTGCC+AGG | 0.495182 | 5.1:-77008725 | None:intergenic |
| TTCACGGAGGGCTTGACGGT+TGG | 0.495893 | 5.1:-77008810 | None:intergenic |
| GTCTATCCAGCAAAACGCAC+AGG | 0.499555 | 5.1:+77009132 | MS.gene37999:CDS |
| GAAGTTCACGGAGGGCTTGA+CGG | 0.504237 | 5.1:-77008814 | None:intergenic |
| TCCAAGAGAGTCAAAACCTT+GGG | 0.506085 | 5.1:-77009020 | None:intergenic |
| GCCATTCTCCTGGCAAATGA+TGG | 0.507357 | 5.1:-77009170 | None:intergenic |
| GATGAGAGCACTGGAACCAT+TGG | 0.508526 | 5.1:+77008749 | MS.gene37999:CDS |
| GTTGAATTAGCTGGAACAAA+TGG | 0.509964 | 5.1:+77008986 | MS.gene37999:CDS |
| GCCATCATTTGCCAGGAGAA+TGG | 0.511001 | 5.1:+77009169 | MS.gene37999:CDS |
| GGAGAGGTATTGGAGTGCAT+TGG | 0.512442 | 5.1:-77008849 | None:intergenic |
| TGGCGTGCGGTACTCAAGAT+TGG | 0.516046 | 5.1:+77009088 | MS.gene37999:CDS |
| CTGCCAAGATACCCTTGCCA+GGG | 0.516454 | 5.1:-77008724 | None:intergenic |
| TAGGCACAAGGCCATTCTCC+TGG | 0.518706 | 5.1:-77009180 | None:intergenic |
| TCGCTACGCCATCATTTGCC+AGG | 0.522141 | 5.1:+77009162 | MS.gene37999:CDS |
| GTATTGGAGTGCATTGGGAG+AGG | 0.525633 | 5.1:-77008843 | None:intergenic |
| ACCTTTGGGCTATCAGAACC+TGG | 0.526805 | 5.1:-77009352 | None:intergenic |
| AGGTGGACAAAGTGAAGAGC+AGG | 0.526814 | 5.1:+77009760 | MS.gene37999:CDS |
| CAATCCCCGGTACCGCGGCT+GGG | 0.528479 | 5.1:-77009727 | None:intergenic |
| TGGTGGAAGTGGAACTGGGT+TGG | 0.532441 | 5.1:+77009976 | MS.gene37999:CDS |
| AGCTAGATGTTGTGAAGCCA+TGG | 0.532979 | 5.1:+77009810 | MS.gene37999:CDS |
| GAGAGGTGAAGAGAAGTTCA+CGG | 0.536141 | 5.1:-77008826 | None:intergenic |
| CAGGTATCACCTGAGGTGAT+TGG | 0.538803 | 5.1:+77009671 | MS.gene37999:intron |
| CCAATTCTGAGGCTACTCTT+GGG | 0.539766 | 5.1:+77009945 | MS.gene37999:CDS |
| CCACTTGGCAAACCGTGCTC+CGG | 0.542305 | 5.1:-77009068 | None:intergenic |
| GGCGATGTCATGAGATCCAT+CGG | 0.542710 | 5.1:-77009224 | None:intergenic |
| AGCAAAGCACACTCAAGACA+TGG | 0.549591 | 5.1:+77009864 | MS.gene37999:CDS |
| TGAGAAGAGTTCCTTCAAGA+AGG | 0.549810 | 5.1:-77009312 | None:intergenic |
| TACATAGCCACCCCTGGCAA+GGG | 0.556199 | 5.1:+77008713 | MS.gene37999:CDS |
| GGTAAAGAGTTTCCTCAAAG+AGG | 0.556676 | 5.1:-77008880 | None:intergenic |
| CAAGAGAACAATGTCATACC+AGG | 0.556695 | 5.1:+77008941 | MS.gene37999:CDS |
| GCTTGCTAGACGCTTGCCAA+TGG | 0.565429 | 5.1:-77008765 | None:intergenic |
| AAGCCTAACATGGTTACTCC+AGG | 0.566895 | 5.1:+77009334 | MS.gene37999:CDS |
| CTGTCCCAGCCGCGGTACCG+GGG | 0.567758 | 5.1:+77009723 | MS.gene37999:CDS |
| CTCCAAGAGAGTCAAAACCT+TGG | 0.567895 | 5.1:-77009021 | None:intergenic |
| AATGCACTCCAATACCTCTC+CGG | 0.571465 | 5.1:+77008851 | MS.gene37999:CDS |
| GTACATAGCCACCCCTGGCA+AGG | 0.572440 | 5.1:+77008712 | MS.gene37999:CDS |
| GCCAAGTACATAGCCACCCC+TGG | 0.573393 | 5.1:+77008707 | MS.gene37999:CDS |
| TGCCAGCAGTACTACAAGGC+CGG | 0.573670 | 5.1:+77009049 | MS.gene37999:CDS |
| TGTGCTTGCAGCCTGTTACA+AGG | 0.574695 | 5.1:+77009270 | MS.gene37999:CDS |
| AACAAAAGGCTTCCCATCGG+AGG | 0.574707 | 5.1:-77008909 | None:intergenic |
| AATGAGAACGAAAGTGTCCA+TGG | 0.576476 | 5.1:-77009827 | None:intergenic |
| GTGTACTCACCAATCACCTC+AGG | 0.577943 | 5.1:-77009680 | None:intergenic |
| ATGGTGGTGGAAGTGGAACT+GGG | 0.578626 | 5.1:+77009972 | MS.gene37999:CDS |
| AACTCTTCTCAAGCCTAACA+TGG | 0.582067 | 5.1:+77009324 | MS.gene37999:CDS |
| TTGGCAGCAGATGAGAGCAC+TGG | 0.583087 | 5.1:+77008740 | MS.gene37999:CDS |
| GGTATTTCTGGCAAGATGCA+AGG | 0.586405 | 5.1:+77009922 | MS.gene37999:CDS |
| GAATGTTGGCAAAGCTCAAG+AGG | 0.587899 | 5.1:+77009901 | MS.gene37999:CDS |
| CAAGATACCCTTGCCAGGGG+TGG | 0.589488 | 5.1:-77008720 | None:intergenic |
| ACCAGGCATCAAAGTTGACA+AGG | 0.595336 | 5.1:+77008958 | MS.gene37999:CDS |
| CCTGACAGAAATACAATCCC+CGG | 0.595672 | 5.1:-77009740 | None:intergenic |
| CTTTACCAGAATTCCTCCGA+TGG | 0.596117 | 5.1:+77008896 | MS.gene37999:CDS |
| GGGATTGTATTTCTGTCAGG+TGG | 0.597741 | 5.1:+77009743 | MS.gene37999:CDS |
| ACTCTTGGGAAATATGGTGG+TGG | 0.603458 | 5.1:+77009959 | MS.gene37999:CDS |
| ACCTGCATACTTTCCAACAA+AGG | 0.607177 | 5.1:-77008245 | None:intergenic |
| TTTACCAGAATTCCTCCGAT+GGG | 0.613347 | 5.1:+77008897 | MS.gene37999:CDS |
| TGCTGGATAGACAACTCAGA+GGG | 0.616996 | 5.1:-77009121 | None:intergenic |
| GGTGAAGAGAAGTTCACGGA+GGG | 0.617088 | 5.1:-77008822 | None:intergenic |
| CCGGAGCACGGTTTGCCAAG+TGG | 0.620912 | 5.1:+77009068 | MS.gene37999:CDS |
| TTCAACAAAAGGCTTCCCAT+CGG | 0.623890 | 5.1:-77008912 | None:intergenic |
| TGCCAAGATACCCTTGCCAG+GGG | 0.625578 | 5.1:-77008723 | None:intergenic |
| TAGATGCCAGCAGTACTACA+AGG | 0.629007 | 5.1:+77009045 | MS.gene37999:CDS |
| ACGGTTTGCCAAGTGGCGTG+CGG | 0.639426 | 5.1:+77009075 | MS.gene37999:CDS |
| AATGGTGAAACAACAACCCA+AGG | 0.641211 | 5.1:+77009004 | MS.gene37999:CDS |
| GCTGGAAAGAAAGAGAATGT+TGG | 0.643496 | 5.1:+77009887 | MS.gene37999:CDS |
| AAGATGCAAGGCCAATTCTG+AGG | 0.643797 | 5.1:+77009934 | MS.gene37999:CDS |
| AGTACTACAAGGCCGGAGCA+CGG | 0.644656 | 5.1:+77009056 | MS.gene37999:CDS |
| TCATGACATCGCCAAATGCG+CGG | 0.648775 | 5.1:+77009234 | MS.gene37999:CDS |
| ACGCAGAACTGTCCCAGCCG+CGG | 0.649683 | 5.1:+77009715 | MS.gene37999:CDS |
| CAGGCTCAACAATAGGCACA+AGG | 0.650137 | 5.1:-77009192 | None:intergenic |
| GCTACTCTTGGGAAATATGG+TGG | 0.651590 | 5.1:+77009956 | MS.gene37999:CDS |
| AAATACAATCCCCGGTACCG+CGG | 0.654312 | 5.1:-77009732 | None:intergenic |
| TCTATCCAGCAAAACGCACA+GGG | 0.656184 | 5.1:+77009133 | MS.gene37999:CDS |
| GCAAAGCACACTCAAGACAT+GGG | 0.661511 | 5.1:+77009865 | MS.gene37999:CDS |
| TTGTGTGCAGGTATCACCTG+AGG | 0.664367 | 5.1:+77009664 | MS.gene37999:intron |
| TCCAGGTTCTGATAGCCCAA+AGG | 0.674535 | 5.1:+77009351 | MS.gene37999:CDS |
| TTCCTCAAAGAGGATGACAC+CGG | 0.677291 | 5.1:-77008870 | None:intergenic |
| CATCAACGTTGAGAACATTG+AGG | 0.688570 | 5.1:+77008787 | MS.gene37999:CDS |
| CAAAGAGGATGACACCGGAG+AGG | 0.703503 | 5.1:-77008865 | None:intergenic |
| CTAGCTTGTTCATTGCATCG+AGG | 0.707440 | 5.1:-77009793 | None:intergenic |
| CCAGGCATCAAAGTTGACAA+GGG | 0.714216 | 5.1:+77008959 | MS.gene37999:CDS |
| TTGCTGGATAGACAACTCAG+AGG | 0.728361 | 5.1:-77009122 | None:intergenic |
| AGGTGAAGAGAAGTTCACGG+AGG | 0.734150 | 5.1:-77008823 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAAAAAGAAATACA+AGG | - | chr5.1:77008454-77008473 | None:intergenic | 10.0% |
| !! | TTAAAACATTTATTTAAGAA+CGG | - | chr5.1:77008353-77008372 | None:intergenic | 10.0% |
| !! | ACAAAATGTAAGAAATTAAC+GGG | + | chr5.1:77009524-77009543 | MS.gene37999:intron | 20.0% |
| !! | GACAAAATGTAAGAAATTAA+CGG | + | chr5.1:77009523-77009542 | MS.gene37999:intron | 20.0% |
| !! | TATCATGAACCATTATTATT+TGG | - | chr5.1:77008595-77008614 | None:intergenic | 20.0% |
| !!! | ATTATATAAACTTGCTAATG+AGG | - | chr5.1:77008645-77008664 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTTCATCATTC+CGG | + | chr5.1:77009478-77009497 | MS.gene37999:intron | 20.0% |
| !!! | TATTATCTTTATTTACTCGA+GGG | + | chr5.1:77009576-77009595 | MS.gene37999:intron | 20.0% |
| !!! | TTATTATCTTTATTTACTCG+AGG | + | chr5.1:77009575-77009594 | MS.gene37999:intron | 20.0% |
| ! | AAAAATTGAGTGTTACCTTT+GGG | - | chr5.1:77009369-77009388 | None:intergenic | 25.0% |
| ! | AACATTTATTTAAGAACGGA+TGG | - | chr5.1:77008349-77008368 | None:intergenic | 25.0% |
| ! | AGCTTATATCAAAAGAAGAA+AGG | - | chr5.1:77008283-77008302 | None:intergenic | 25.0% |
| ! | CTTATATCAAAAGAAGAAAG+GGG | - | chr5.1:77008281-77008300 | None:intergenic | 25.0% |
| ! | GCTTATATCAAAAGAAGAAA+GGG | - | chr5.1:77008282-77008301 | None:intergenic | 25.0% |
| ! | GTTTATATAATAGTTGACTG+TGG | + | chr5.1:77008654-77008673 | MS.gene37999:intron | 25.0% |
| ! | TAAAAATTGAGTGTTACCTT+TGG | - | chr5.1:77009370-77009389 | None:intergenic | 25.0% |
| ! | TAATTGTTCTTGTATGTGTT+TGG | - | chr5.1:77008324-77008343 | None:intergenic | 25.0% |
| ! | TTATATCAAAAGAAGAAAGG+GGG | - | chr5.1:77008280-77008299 | None:intergenic | 25.0% |
| !! | TCTAAAGTGCCAAATAATAA+TGG | + | chr5.1:77008583-77008602 | MS.gene37999:intron | 25.0% |
| !! | TTCTGAGAGTTTATATGTTA+AGG | + | chr5.1:77010000-77010019 | MS.gene37999:CDS | 25.0% |
| !! | TTTTGTCGATGCATAATAAT+AGG | - | chr5.1:77009510-77009529 | None:intergenic | 25.0% |
| GCATAATAATAGGAACTAAC+CGG | - | chr5.1:77009500-77009519 | None:intergenic | 30.0% | |
| !! | TATGCACTTCTTAATTTGTG+TGG | + | chr5.1:77008473-77008492 | MS.gene37999:intron | 30.0% |
| !! | TTCTTGTATGTGTTTGGTTT+TGG | - | chr5.1:77008318-77008337 | None:intergenic | 30.0% |
| AAAATCTCAGGCTCAACAAT+AGG | - | chr5.1:77009202-77009221 | None:intergenic | 35.0% | |
| GCTAATGAGGATTGAAATTG+AGG | - | chr5.1:77008632-77008651 | None:intergenic | 35.0% | |
| GTTGAATTAGCTGGAACAAA+TGG | + | chr5.1:77008986-77009005 | MS.gene37999:CDS | 35.0% | |
| TCTTGGAGGATTTCAACAAA+AGG | - | chr5.1:77008926-77008945 | None:intergenic | 35.0% | |
| TTAGAATGACTAGTGTATGC+TGG | - | chr5.1:77008568-77008587 | None:intergenic | 35.0% | |
| ! | CAATTTGCATTTTTGTGTGC+AGG | + | chr5.1:77009652-77009671 | MS.gene37999:intron | 35.0% |
| AACTCTTCTCAAGCCTAACA+TGG | + | chr5.1:77009324-77009343 | MS.gene37999:CDS | 40.0% | |
| AATGGTGAAACAACAACCCA+AGG | + | chr5.1:77009004-77009023 | MS.gene37999:CDS | 40.0% | |
| ACCTGCATACTTTCCAACAA+AGG | - | chr5.1:77008248-77008267 | None:intergenic | 40.0% | |
| ATCATTCAGTGCCTTGTAAC+AGG | - | chr5.1:77009284-77009303 | None:intergenic | 40.0% | |
| CAAGAGAACAATGTCATACC+AGG | + | chr5.1:77008941-77008960 | MS.gene37999:CDS | 40.0% | |
| CATCAACGTTGAGAACATTG+AGG | + | chr5.1:77008787-77008806 | MS.gene37999:CDS | 40.0% | |
| CTGGTATGACATTGTTCTCT+TGG | - | chr5.1:77008943-77008962 | None:intergenic | 40.0% | |
| GCTGGAAAGAAAGAGAATGT+TGG | + | chr5.1:77009887-77009906 | MS.gene37999:CDS | 40.0% | |
| GGACACTTTCGTTCTCATTT+GGG | + | chr5.1:77009831-77009850 | MS.gene37999:CDS | 40.0% | |
| GGTAAAGAGTTTCCTCAAAG+AGG | - | chr5.1:77008883-77008902 | None:intergenic | 40.0% | |
| GTATGACATTGTTCTCTTGG+AGG | - | chr5.1:77008940-77008959 | None:intergenic | 40.0% | |
| GTGTAAGCTAGTGACAAGAT+TGG | - | chr5.1:77009408-77009427 | None:intergenic | 40.0% | |
| TCCAAGAGAGTCAAAACCTT+GGG | - | chr5.1:77009023-77009042 | None:intergenic | 40.0% | |
| TGAGAAGAGTTCCTTCAAGA+AGG | - | chr5.1:77009315-77009334 | None:intergenic | 40.0% | |
| TGGACACTTTCGTTCTCATT+TGG | + | chr5.1:77009830-77009849 | MS.gene37999:CDS | 40.0% | |
| TTCAACAAAAGGCTTCCCAT+CGG | - | chr5.1:77008915-77008934 | None:intergenic | 40.0% | |
| TTTACCAGAATTCCTCCGAT+GGG | + | chr5.1:77008897-77008916 | MS.gene37999:CDS | 40.0% | |
| ! | ACCTAGTGCGAGAGTTATTT+TGG | + | chr5.1:77008501-77008520 | MS.gene37999:intron | 40.0% |
| ! | GATCCATCGGTTAAAATCTC+AGG | - | chr5.1:77009214-77009233 | None:intergenic | 40.0% |
| !! | AAGGGTGTTGTTGAATTAGC+TGG | + | chr5.1:77008977-77008996 | MS.gene37999:CDS | 40.0% |
| !! | AATGAGAACGAAAGTGTCCA+TGG | - | chr5.1:77009830-77009849 | None:intergenic | 40.0% |
| !! | CAAAGCTCAAGAGGTATTTC+TGG | + | chr5.1:77009910-77009929 | MS.gene37999:CDS | 40.0% |
| !! | CCTAGTGCGAGAGTTATTTT+GGG | + | chr5.1:77008502-77008521 | MS.gene37999:intron | 40.0% |
| !!! | GAGAGTTATTTTGGGACAGA+GGG | + | chr5.1:77008510-77008529 | MS.gene37999:intron | 40.0% |
| AAGATGCAAGGCCAATTCTG+AGG | + | chr5.1:77009934-77009953 | MS.gene37999:CDS | 45.0% | |
| AAGCCTAACATGGTTACTCC+AGG | + | chr5.1:77009334-77009353 | MS.gene37999:CDS | 45.0% | |
| AATGCACTCCAATACCTCTC+CGG | + | chr5.1:77008851-77008870 | MS.gene37999:CDS | 45.0% | |
| ACCAGGCATCAAAGTTGACA+AGG | + | chr5.1:77008958-77008977 | MS.gene37999:CDS | 45.0% | |
| ACTCTTGGGAAATATGGTGG+TGG | + | chr5.1:77009959-77009978 | MS.gene37999:CDS | 45.0% | |
| AGCAAAGCACACTCAAGACA+TGG | + | chr5.1:77009864-77009883 | MS.gene37999:CDS | 45.0% | |
| AGCTAGATGTTGTGAAGCCA+TGG | + | chr5.1:77009810-77009829 | MS.gene37999:CDS | 45.0% | |
| CCAGGCATCAAAGTTGACAA+GGG | + | chr5.1:77008959-77008978 | MS.gene37999:CDS | 45.0% | |
| CCCAAAATAACTCTCGCACT+AGG | - | chr5.1:77008505-77008524 | None:intergenic | 45.0% | |
| CCTGACAGAAATACAATCCC+CGG | - | chr5.1:77009743-77009762 | None:intergenic | 45.0% | |
| CTCCAAGAGAGTCAAAACCT+TGG | - | chr5.1:77009024-77009043 | None:intergenic | 45.0% | |
| CTTTACCAGAATTCCTCCGA+TGG | + | chr5.1:77008896-77008915 | MS.gene37999:CDS | 45.0% | |
| GAACCTGGAGTAACCATGTT+AGG | - | chr5.1:77009340-77009359 | None:intergenic | 45.0% | |
| GAATGTTGGCAAAGCTCAAG+AGG | + | chr5.1:77009901-77009920 | MS.gene37999:CDS | 45.0% | |
| GAGAGGTGAAGAGAAGTTCA+CGG | - | chr5.1:77008829-77008848 | None:intergenic | 45.0% | |
| GAGGCTACTCTTGGGAAATA+TGG | + | chr5.1:77009953-77009972 | MS.gene37999:CDS | 45.0% | |
| GATCAGCATGTCCTTCTTGA+AGG | + | chr5.1:77009301-77009320 | MS.gene37999:CDS | 45.0% | |
| GCAAAGCACACTCAAGACAT+GGG | + | chr5.1:77009865-77009884 | MS.gene37999:CDS | 45.0% | |
| GCTACTCTTGGGAAATATGG+TGG | + | chr5.1:77009956-77009975 | MS.gene37999:CDS | 45.0% | |
| TAGATGCCAGCAGTACTACA+AGG | + | chr5.1:77009045-77009064 | MS.gene37999:CDS | 45.0% | |
| TCTATCCAGCAAAACGCACA+GGG | + | chr5.1:77009133-77009152 | MS.gene37999:CDS | 45.0% | |
| TGCTGGATAGACAACTCAGA+GGG | - | chr5.1:77009124-77009143 | None:intergenic | 45.0% | |
| TGTATGCTGGCAGCATTTCT+AGG | - | chr5.1:77008555-77008574 | None:intergenic | 45.0% | |
| TTCCTCAAAGAGGATGACAC+CGG | - | chr5.1:77008873-77008892 | None:intergenic | 45.0% | |
| TTGCTGGATAGACAACTCAG+AGG | - | chr5.1:77009125-77009144 | None:intergenic | 45.0% | |
| ! | GCCTTTGTTGGAAAGTATGC+AGG | + | chr5.1:77008244-77008263 | MS.gene37999:CDS | 45.0% |
| ! | GGGATTGTATTTCTGTCAGG+TGG | + | chr5.1:77009743-77009762 | MS.gene37999:CDS | 45.0% |
| !! | CCAATTCTGAGGCTACTCTT+GGG | + | chr5.1:77009945-77009964 | MS.gene37999:CDS | 45.0% |
| !! | CTAGCTTGTTCATTGCATCG+AGG | - | chr5.1:77009796-77009815 | None:intergenic | 45.0% |
| !! | GAGAGGTATTGGAGTGCATT+GGG | - | chr5.1:77008851-77008870 | None:intergenic | 45.0% |
| !! | GAGCCTGAGATTTTAACCGA+TGG | + | chr5.1:77009208-77009227 | MS.gene37999:CDS | 45.0% |
| !! | GGTATTTCTGGCAAGATGCA+AGG | + | chr5.1:77009922-77009941 | MS.gene37999:CDS | 45.0% |
| !!! | ACCCAAGGTTTTGACTCTCT+TGG | + | chr5.1:77009019-77009038 | MS.gene37999:CDS | 45.0% |
| !!! | CGAGAGTTATTTTGGGACAG+AGG | + | chr5.1:77008509-77008528 | MS.gene37999:intron | 45.0% |
| AAATACAATCCCCGGTACCG+CGG | - | chr5.1:77009735-77009754 | None:intergenic | 50.0% | |
| AACAAAAGGCTTCCCATCGG+AGG | - | chr5.1:77008912-77008931 | None:intergenic | 50.0% | |
| ACCTTTGGGCTATCAGAACC+TGG | - | chr5.1:77009355-77009374 | None:intergenic | 50.0% | |
| AGACAACTCAGAGGGCTCAT+TGG | - | chr5.1:77009116-77009135 | None:intergenic | 50.0% | |
| AGGTGAAGAGAAGTTCACGG+AGG | - | chr5.1:77008826-77008845 | None:intergenic | 50.0% | |
| AGGTGGACAAAGTGAAGAGC+AGG | + | chr5.1:77009760-77009779 | MS.gene37999:CDS | 50.0% | |
| CAGGCTCAACAATAGGCACA+AGG | - | chr5.1:77009195-77009214 | None:intergenic | 50.0% | |
| CAGGTATCACCTGAGGTGAT+TGG | + | chr5.1:77009671-77009690 | MS.gene37999:intron | 50.0% | |
| CCCAAGAGTAGCCTCAGAAT+TGG | - | chr5.1:77009948-77009967 | None:intergenic | 50.0% | |
| CCCTTGTCAACTTTGATGCC+TGG | - | chr5.1:77008962-77008981 | None:intergenic | 50.0% | |
| GACAACTCAGAGGGCTCATT+GGG | - | chr5.1:77009115-77009134 | None:intergenic | 50.0% | |
| GCCATCATTTGCCAGGAGAA+TGG | + | chr5.1:77009169-77009188 | MS.gene37999:CDS | 50.0% | |
| GCCATTCTCCTGGCAAATGA+TGG | - | chr5.1:77009173-77009192 | None:intergenic | 50.0% | |
| GGCGATGTCATGAGATCCAT+CGG | - | chr5.1:77009227-77009246 | None:intergenic | 50.0% | |
| GGTGAAGAGAAGTTCACGGA+GGG | - | chr5.1:77008825-77008844 | None:intergenic | 50.0% | |
| GTATTGGAGTGCATTGGGAG+AGG | - | chr5.1:77008846-77008865 | None:intergenic | 50.0% | |
| GTCTATCCAGCAAAACGCAC+AGG | + | chr5.1:77009132-77009151 | MS.gene37999:CDS | 50.0% | |
| GTGTACTCACCAATCACCTC+AGG | - | chr5.1:77009683-77009702 | None:intergenic | 50.0% | |
| TCATGACATCGCCAAATGCG+CGG | + | chr5.1:77009234-77009253 | MS.gene37999:CDS | 50.0% | |
| TCGAGGGACAAAGTCAGAGA+GGG | + | chr5.1:77009592-77009611 | MS.gene37999:intron | 50.0% | |
| TGTGCTTGCAGCCTGTTACA+AGG | + | chr5.1:77009270-77009289 | MS.gene37999:CDS | 50.0% | |
| TTGTGTGCAGGTATCACCTG+AGG | + | chr5.1:77009664-77009683 | MS.gene37999:intron | 50.0% | |
| ! | CCGGGGATTGTATTTCTGTC+AGG | + | chr5.1:77009740-77009759 | MS.gene37999:CDS | 50.0% |
| ! | TCCAGGTTCTGATAGCCCAA+AGG | + | chr5.1:77009351-77009370 | MS.gene37999:CDS | 50.0% |
| !! | ATGGTGGTGGAAGTGGAACT+GGG | + | chr5.1:77009972-77009991 | MS.gene37999:CDS | 50.0% |
| !! | GATGAGAGCACTGGAACCAT+TGG | + | chr5.1:77008749-77008768 | MS.gene37999:CDS | 50.0% |
| !! | GCCAATTCTGAGGCTACTCT+TGG | + | chr5.1:77009944-77009963 | MS.gene37999:CDS | 50.0% |
| !! | GGAGAGGTATTGGAGTGCAT+TGG | - | chr5.1:77008852-77008871 | None:intergenic | 50.0% |
| !! | GGGAAATATGGTGGTGGAAG+TGG | + | chr5.1:77009965-77009984 | MS.gene37999:CDS | 50.0% |
| !! | TATGGTGGTGGAAGTGGAAC+TGG | + | chr5.1:77009971-77009990 | MS.gene37999:CDS | 50.0% |
| AGCACACTCAAGACATGGGC+TGG | + | chr5.1:77009869-77009888 | MS.gene37999:CDS | 55.0% | |
| AGTACTACAAGGCCGGAGCA+CGG | + | chr5.1:77009056-77009075 | MS.gene37999:CDS | 55.0% | |
| CAAAGAGGATGACACCGGAG+AGG | - | chr5.1:77008868-77008887 | None:intergenic | 55.0% | |
| CTCGAGGGACAAAGTCAGAG+AGG | + | chr5.1:77009591-77009610 | MS.gene37999:intron | 55.0% | |
| CTGCCAAGATACCCTTGCCA+GGG | - | chr5.1:77008727-77008746 | None:intergenic | 55.0% | |
| GAAGTTCACGGAGGGCTTGA+CGG | - | chr5.1:77008817-77008836 | None:intergenic | 55.0% | |
| GCTTCCCATCGGAGGAATTC+TGG | - | chr5.1:77008904-77008923 | None:intergenic | 55.0% | |
| TACATAGCCACCCCTGGCAA+GGG | + | chr5.1:77008713-77008732 | MS.gene37999:CDS | 55.0% | |
| TAGGCACAAGGCCATTCTCC+TGG | - | chr5.1:77009183-77009202 | None:intergenic | 55.0% | |
| TCGCTACGCCATCATTTGCC+AGG | + | chr5.1:77009162-77009181 | MS.gene37999:CDS | 55.0% | |
| TGCCAAGATACCCTTGCCAG+GGG | - | chr5.1:77008726-77008745 | None:intergenic | 55.0% | |
| TGCCAGCAGTACTACAAGGC+CGG | + | chr5.1:77009049-77009068 | MS.gene37999:CDS | 55.0% | |
| TGGCGTGCGGTACTCAAGAT+TGG | + | chr5.1:77009088-77009107 | MS.gene37999:CDS | 55.0% | |
| TGGTGGAAGTGGAACTGGGT+TGG | + | chr5.1:77009976-77009995 | MS.gene37999:CDS | 55.0% | |
| TTCAGTGACAGCCGCGCATT+TGG | - | chr5.1:77009248-77009267 | None:intergenic | 55.0% | |
| ! | GCTTGCTAGACGCTTGCCAA+TGG | - | chr5.1:77008768-77008787 | None:intergenic | 55.0% |
| ! | GGATGACACCGGAGAGGTAT+TGG | - | chr5.1:77008862-77008881 | None:intergenic | 55.0% |
| ! | TTGGCAGCAGATGAGAGCAC+TGG | + | chr5.1:77008740-77008759 | MS.gene37999:CDS | 55.0% |
| !! | CTCCGGTGTCATCCTCTTTG+AGG | + | chr5.1:77008868-77008887 | MS.gene37999:CDS | 55.0% |
| ACGGTTTGCCAAGTGGCGTG+CGG | + | chr5.1:77009075-77009094 | MS.gene37999:CDS | 60.0% | |
| CAAGATACCCTTGCCAGGGG+TGG | - | chr5.1:77008723-77008742 | None:intergenic | 60.0% | |
| CCACTTGGCAAACCGTGCTC+CGG | - | chr5.1:77009071-77009090 | None:intergenic | 60.0% | |
| CCAGCAAAACGCACAGGGCT+TGG | + | chr5.1:77009138-77009157 | MS.gene37999:CDS | 60.0% | |
| GCCAAGTACATAGCCACCCC+TGG | + | chr5.1:77008707-77008726 | MS.gene37999:CDS | 60.0% | |
| GCCAGGGGTGGCTATGTACT+TGG | - | chr5.1:77008711-77008730 | None:intergenic | 60.0% | |
| GCTGCCAAGATACCCTTGCC+AGG | - | chr5.1:77008728-77008747 | None:intergenic | 60.0% | |
| GTACATAGCCACCCCTGGCA+AGG | + | chr5.1:77008712-77008731 | MS.gene37999:CDS | 60.0% | |
| TTCACGGAGGGCTTGACGGT+TGG | - | chr5.1:77008813-77008832 | None:intergenic | 60.0% | |
| ! | CCAAGCCCTGTGCGTTTTGC+TGG | - | chr5.1:77009141-77009160 | None:intergenic | 60.0% |
| ! | CTCCGGCCTTGTAGTACTGC+TGG | - | chr5.1:77009054-77009073 | None:intergenic | 60.0% |
| ! | CTTGAGTACCGCACGCCACT+TGG | - | chr5.1:77009086-77009105 | None:intergenic | 60.0% |
| !! | CACCCCTGGCAAGGGTATCT+TGG | + | chr5.1:77008721-77008740 | MS.gene37999:CDS | 60.0% |
| AACTGTCCCAGCCGCGGTAC+CGG | + | chr5.1:77009721-77009740 | MS.gene37999:CDS | 65.0% | |
| ACGCAGAACTGTCCCAGCCG+CGG | + | chr5.1:77009715-77009734 | MS.gene37999:CDS | 65.0% | |
| CCGGAGCACGGTTTGCCAAG+TGG | + | chr5.1:77009068-77009087 | MS.gene37999:CDS | 65.0% | |
| ACAATCCCCGGTACCGCGGC+TGG | - | chr5.1:77009731-77009750 | None:intergenic | 70.0% | |
| ACTGTCCCAGCCGCGGTACC+GGG | + | chr5.1:77009722-77009741 | MS.gene37999:CDS | 70.0% | |
| CAATCCCCGGTACCGCGGCT+GGG | - | chr5.1:77009730-77009749 | None:intergenic | 70.0% | |
| CTGTCCCAGCCGCGGTACCG+GGG | + | chr5.1:77009723-77009742 | MS.gene37999:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 77008238 | 77010036 | 77008238 | ID=MS.gene37999 |
| chr5.1 | mRNA | 77008238 | 77010036 | 77008238 | ID=MS.gene37999.t1;Parent=MS.gene37999 |
| chr5.1 | exon | 77008238 | 77008265 | 77008238 | ID=MS.gene37999.t1.exon1;Parent=MS.gene37999.t1 |
| chr5.1 | CDS | 77008238 | 77008265 | 77008238 | ID=cds.MS.gene37999.t1;Parent=MS.gene37999.t1 |
| chr5.1 | exon | 77008690 | 77009372 | 77008690 | ID=MS.gene37999.t1.exon2;Parent=MS.gene37999.t1 |
| chr5.1 | CDS | 77008690 | 77009372 | 77008690 | ID=cds.MS.gene37999.t1;Parent=MS.gene37999.t1 |
| chr5.1 | exon | 77009674 | 77010036 | 77009674 | ID=MS.gene37999.t1.exon3;Parent=MS.gene37999.t1 |
| chr5.1 | CDS | 77009674 | 77010036 | 77009674 | ID=cds.MS.gene37999.t1;Parent=MS.gene37999.t1 |
| Gene Sequence |
| Protein sequence |
