Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81275.t1 | XP_003617895.1 | 98.6 | 357 | 5 | 0 | 1 | 357 | 1 | 357 | 4.00E-197 | 697.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81275.t1 | P46256 | 96.9 | 357 | 11 | 0 | 1 | 357 | 1 | 357 | 1.1e-195 | 683.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81275.t1 | G7K4T4 | 98.6 | 357 | 5 | 0 | 1 | 357 | 1 | 357 | 2.9e-197 | 697.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene81275 | 0.811326 | 7.40E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene81275 | 0.933341 | 2.18E-95 | -1.69E-46 |
| MS.gene049173 | MS.gene81275 | 0.836748 | 7.80E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene81275 | 0.852567 | 4.24E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene81275 | 0.883257 | 5.23E-71 | -1.69E-46 |
| MS.gene049232 | MS.gene81275 | 0.815126 | 1.08E-51 | -1.69E-46 |
| MS.gene049281 | MS.gene81275 | -0.834744 | 2.51E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene81275 | 0.92798 | 5.50E-92 | -1.69E-46 |
| MS.gene049320 | MS.gene81275 | 0.925743 | 1.21E-90 | -1.69E-46 |
| MS.gene04939 | MS.gene81275 | 0.833148 | 6.30E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene81275 | 0.87463 | 5.81E-68 | -1.69E-46 |
| MS.gene049627 | MS.gene81275 | 0.803486 | 3.41E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene81275 | 0.874857 | 4.87E-68 | -1.69E-46 |
| MS.gene049805 | MS.gene81275 | 0.824543 | 7.62E-54 | -1.69E-46 |
| MS.gene049865 | MS.gene81275 | 0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene05010 | MS.gene81275 | 0.884575 | 1.71E-71 | -1.69E-46 |
| MS.gene050163 | MS.gene81275 | 0.888572 | 5.24E-73 | -1.69E-46 |
| MS.gene050165 | MS.gene81275 | 0.885923 | 5.35E-72 | -1.69E-46 |
| MS.gene050170 | MS.gene81275 | 0.880918 | 3.69E-70 | -1.69E-46 |
| MS.gene050323 | MS.gene81275 | 0.871925 | 4.71E-67 | -1.69E-46 |
| MS.gene050333 | MS.gene81275 | 0.861278 | 1.15E-63 | -1.69E-46 |
| MS.gene050338 | MS.gene81275 | -0.800249 | 1.57E-48 | -1.69E-46 |
| MS.gene050444 | MS.gene81275 | 0.843485 | 1.36E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene81275 | 0.88701 | 2.08E-72 | -1.69E-46 |
| MS.gene050504 | MS.gene81275 | 0.919899 | 2.53E-87 | -1.69E-46 |
| MS.gene050518 | MS.gene81275 | 0.890255 | 1.16E-73 | -1.69E-46 |
| MS.gene050538 | MS.gene81275 | 0.827818 | 1.27E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene81275 | 0.915192 | 7.88E-85 | -1.69E-46 |
| MS.gene050593 | MS.gene81275 | 0.813447 | 2.55E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene81275 | 0.922543 | 8.57E-89 | -1.69E-46 |
| MS.gene050675 | MS.gene81275 | 0.890156 | 1.27E-73 | -1.69E-46 |
| MS.gene050699 | MS.gene81275 | 0.945258 | 4.28E-104 | -1.69E-46 |
| MS.gene050747 | MS.gene81275 | 0.848824 | 4.79E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene81275 | 0.896576 | 3.23E-76 | -1.69E-46 |
| MS.gene05080 | MS.gene81275 | 0.852843 | 3.54E-61 | -1.69E-46 |
| MS.gene05081 | MS.gene81275 | 0.830714 | 2.51E-55 | -1.69E-46 |
| MS.gene050832 | MS.gene81275 | -0.803949 | 2.73E-49 | -1.69E-46 |
| MS.gene050833 | MS.gene81275 | -0.802995 | 4.31E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene81275 | 0.854826 | 9.50E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene81275 | 0.850356 | 1.79E-60 | -1.69E-46 |
| MS.gene050876 | MS.gene81275 | 0.842107 | 3.16E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene81275 | 0.844913 | 5.63E-59 | -1.69E-46 |
| MS.gene050950 | MS.gene81275 | 0.844203 | 8.74E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene81275 | 0.913348 | 6.83E-84 | -1.69E-46 |
| MS.gene05100 | MS.gene81275 | 0.858141 | 1.01E-62 | -1.69E-46 |
| MS.gene051127 | MS.gene81275 | -0.801866 | 7.36E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene81275 | -0.803279 | 3.76E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene81275 | 0.801956 | 7.05E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene81275 | 0.89914 | 2.66E-77 | -1.69E-46 |
| MS.gene051336 | MS.gene81275 | 0.832443 | 9.43E-56 | -1.69E-46 |
| MS.gene051364 | MS.gene81275 | -0.828464 | 8.86E-55 | -1.69E-46 |
| MS.gene051366 | MS.gene81275 | -0.82387 | 1.10E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene81275 | 0.885274 | 9.37E-72 | -1.69E-46 |
| MS.gene051651 | MS.gene81275 | -0.829942 | 3.88E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene81275 | 0.807046 | 6.12E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene81275 | 0.894211 | 3.05E-75 | -1.69E-46 |
| MS.gene051838 | MS.gene81275 | 0.843655 | 1.23E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene81275 | 0.839302 | 1.72E-57 | -1.69E-46 |
| MS.gene051949 | MS.gene81275 | 0.852554 | 4.28E-61 | -1.69E-46 |
| MS.gene051973 | MS.gene81275 | -0.808841 | 2.54E-50 | -1.69E-46 |
| MS.gene052129 | MS.gene81275 | -0.804008 | 2.65E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene81275 | 0.850108 | 2.10E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene81275 | 0.831676 | 1.46E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene81275 | 0.860393 | 2.13E-63 | -1.69E-46 |
| MS.gene052486 | MS.gene81275 | 0.868906 | 4.61E-66 | -1.69E-46 |
| MS.gene052501 | MS.gene81275 | 0.821097 | 4.84E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene81275 | 0.89152 | 3.68E-74 | -1.69E-46 |
| MS.gene052504 | MS.gene81275 | 0.823992 | 1.03E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene81275 | 0.865602 | 5.24E-65 | -1.69E-46 |
| MS.gene052615 | MS.gene81275 | 0.871862 | 4.94E-67 | -1.69E-46 |
| MS.gene052820 | MS.gene81275 | 0.809713 | 1.65E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene81275 | 0.876922 | 9.49E-69 | -1.69E-46 |
| MS.gene052823 | MS.gene81275 | 0.886096 | 4.60E-72 | -1.69E-46 |
| MS.gene052825 | MS.gene81275 | 0.884167 | 2.42E-71 | -1.69E-46 |
| MS.gene052870 | MS.gene81275 | 0.820444 | 6.84E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene81275 | 0.84717 | 1.37E-59 | -1.69E-46 |
| MS.gene052916 | MS.gene81275 | 0.814558 | 1.45E-51 | -1.69E-46 |
| MS.gene052937 | MS.gene81275 | -0.801733 | 7.84E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene81275 | 0.831429 | 1.68E-55 | -1.69E-46 |
| MS.gene053117 | MS.gene81275 | 0.808354 | 3.23E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene81275 | 0.877711 | 5.05E-69 | -1.69E-46 |
| MS.gene053207 | MS.gene81275 | 0.840927 | 6.47E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene81275 | 0.893832 | 4.35E-75 | -1.69E-46 |
| MS.gene053286 | MS.gene81275 | 0.892626 | 1.33E-74 | -1.69E-46 |
| MS.gene053420 | MS.gene81275 | -0.810254 | 1.26E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene81275 | 0.849002 | 4.27E-60 | -1.69E-46 |
| MS.gene053479 | MS.gene81275 | 0.86054 | 1.92E-63 | -1.69E-46 |
| MS.gene053480 | MS.gene81275 | 0.89038 | 1.04E-73 | -1.69E-46 |
| MS.gene053561 | MS.gene81275 | -0.80032 | 1.52E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene81275 | 0.851825 | 6.89E-61 | -1.69E-46 |
| MS.gene053632 | MS.gene81275 | 0.888536 | 5.41E-73 | -1.69E-46 |
| MS.gene053824 | MS.gene81275 | 0.879636 | 1.06E-69 | -1.69E-46 |
| MS.gene053916 | MS.gene81275 | 0.84587 | 3.10E-59 | -1.69E-46 |
| MS.gene054343 | MS.gene81275 | 0.83492 | 2.27E-56 | -1.69E-46 |
| MS.gene054344 | MS.gene81275 | 0.866864 | 2.09E-65 | -1.69E-46 |
| MS.gene054408 | MS.gene81275 | 0.831258 | 1.85E-55 | -1.69E-46 |
| MS.gene054555 | MS.gene81275 | -0.813893 | 2.03E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene81275 | 0.845033 | 5.23E-59 | -1.69E-46 |
| MS.gene054600 | MS.gene81275 | 0.889203 | 2.99E-73 | -1.69E-46 |
| MS.gene054642 | MS.gene81275 | 0.905879 | 2.69E-80 | -1.69E-46 |
| MS.gene054706 | MS.gene81275 | -0.817311 | 3.52E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene81275 | 0.904451 | 1.21E-79 | -1.69E-46 |
| MS.gene054884 | MS.gene81275 | -0.803892 | 2.81E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene81275 | 0.809888 | 1.51E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene81275 | 0.923918 | 1.41E-89 | -1.69E-46 |
| MS.gene054959 | MS.gene81275 | -0.847253 | 1.30E-59 | -1.69E-46 |
| MS.gene055134 | MS.gene81275 | -0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene81275 | -0.826193 | 3.10E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene81275 | 0.866768 | 2.24E-65 | -1.69E-46 |
| MS.gene055212 | MS.gene81275 | 0.800154 | 1.65E-48 | -1.69E-46 |
| MS.gene055224 | MS.gene81275 | 0.814229 | 1.71E-51 | -1.69E-46 |
| MS.gene055251 | MS.gene81275 | -0.825099 | 5.64E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene81275 | 0.824277 | 8.81E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene81275 | 0.933441 | 1.87E-95 | -1.69E-46 |
| MS.gene055502 | MS.gene81275 | 0.917963 | 2.79E-86 | -1.69E-46 |
| MS.gene055577 | MS.gene81275 | 0.8966 | 3.16E-76 | -1.69E-46 |
| MS.gene055719 | MS.gene81275 | -0.803066 | 4.16E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene81275 | 0.836905 | 7.11E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene81275 | 0.888512 | 5.53E-73 | -1.69E-46 |
| MS.gene055750 | MS.gene81275 | 0.872155 | 3.95E-67 | -1.69E-46 |
| MS.gene055751 | MS.gene81275 | 0.891088 | 5.46E-74 | -1.69E-46 |
| MS.gene055776 | MS.gene81275 | 0.875739 | 2.43E-68 | -1.69E-46 |
| MS.gene05589 | MS.gene81275 | 0.892419 | 1.61E-74 | -1.69E-46 |
| MS.gene055941 | MS.gene81275 | 0.856707 | 2.68E-62 | -1.69E-46 |
| MS.gene055942 | MS.gene81275 | -0.819346 | 1.22E-52 | -1.69E-46 |
| MS.gene055956 | MS.gene81275 | -0.845201 | 4.71E-59 | -1.69E-46 |
| MS.gene056046 | MS.gene81275 | 0.814869 | 1.24E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene81275 | 0.824469 | 7.94E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene81275 | 0.859441 | 4.13E-63 | -1.69E-46 |
| MS.gene056409 | MS.gene81275 | 0.817288 | 3.56E-52 | -1.69E-46 |
| MS.gene056446 | MS.gene81275 | 0.806705 | 7.22E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene81275 | 0.915556 | 5.12E-85 | -1.69E-46 |
| MS.gene056510 | MS.gene81275 | 0.888131 | 7.75E-73 | -1.69E-46 |
| MS.gene056550 | MS.gene81275 | -0.825749 | 3.96E-54 | -1.69E-46 |
| MS.gene056610 | MS.gene81275 | 0.83417 | 3.50E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene81275 | 0.920707 | 9.10E-88 | -1.69E-46 |
| MS.gene056692 | MS.gene81275 | 0.88593 | 5.32E-72 | -1.69E-46 |
| MS.gene056761 | MS.gene81275 | -0.807894 | 4.04E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene81275 | -0.800636 | 1.31E-48 | -1.69E-46 |
| MS.gene056898 | MS.gene81275 | 0.827932 | 1.19E-54 | -1.69E-46 |
| MS.gene056946 | MS.gene81275 | 0.805424 | 1.34E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene81275 | -0.800047 | 1.73E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene81275 | 0.839635 | 1.41E-57 | -1.69E-46 |
| MS.gene057129 | MS.gene81275 | 0.812981 | 3.22E-51 | -1.69E-46 |
| MS.gene057196 | MS.gene81275 | 0.838146 | 3.42E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene81275 | 0.832315 | 1.01E-55 | -1.69E-46 |
| MS.gene057332 | MS.gene81275 | 0.856721 | 2.66E-62 | -1.69E-46 |
| MS.gene057416 | MS.gene81275 | 0.861129 | 1.27E-63 | -1.69E-46 |
| MS.gene057658 | MS.gene81275 | 0.881769 | 1.82E-70 | -1.69E-46 |
| MS.gene057831 | MS.gene81275 | 0.870125 | 1.85E-66 | -1.69E-46 |
| MS.gene057986 | MS.gene81275 | 0.801653 | 8.13E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene81275 | 0.808821 | 2.56E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene81275 | -0.863882 | 1.81E-64 | -1.69E-46 |
| MS.gene058338 | MS.gene81275 | 0.858308 | 9.01E-63 | -1.69E-46 |
| MS.gene05837 | MS.gene81275 | 0.861355 | 1.09E-63 | -1.69E-46 |
| MS.gene058382 | MS.gene81275 | -0.811588 | 6.49E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene81275 | 0.941441 | 4.14E-101 | -1.69E-46 |
| MS.gene058544 | MS.gene81275 | 0.904119 | 1.71E-79 | -1.69E-46 |
| MS.gene058603 | MS.gene81275 | -0.810809 | 9.58E-51 | -1.69E-46 |
| MS.gene058719 | MS.gene81275 | 0.806079 | 9.79E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene81275 | 0.884432 | 1.93E-71 | -1.69E-46 |
| MS.gene058773 | MS.gene81275 | 0.873874 | 1.05E-67 | -1.69E-46 |
| MS.gene058838 | MS.gene81275 | 0.900645 | 5.95E-78 | -1.69E-46 |
| MS.gene05883 | MS.gene81275 | 0.80018 | 1.63E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene81275 | 0.927193 | 1.65E-91 | -1.69E-46 |
| MS.gene059023 | MS.gene81275 | 0.921016 | 6.14E-88 | -1.69E-46 |
| MS.gene059029 | MS.gene81275 | 0.818341 | 2.06E-52 | -1.69E-46 |
| MS.gene059103 | MS.gene81275 | -0.806823 | 6.82E-50 | -1.69E-46 |
| MS.gene05912 | MS.gene81275 | 0.810924 | 9.05E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene81275 | 0.81937 | 1.20E-52 | -1.69E-46 |
| MS.gene05914 | MS.gene81275 | 0.868397 | 6.73E-66 | -1.69E-46 |
| MS.gene05934 | MS.gene81275 | 0.828712 | 7.72E-55 | -1.69E-46 |
| MS.gene059480 | MS.gene81275 | -0.805861 | 1.09E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene81275 | 0.822218 | 2.67E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene81275 | 0.946779 | 2.40E-105 | -1.69E-46 |
| MS.gene059718 | MS.gene81275 | 0.897344 | 1.54E-76 | -1.69E-46 |
| MS.gene059756 | MS.gene81275 | 0.910134 | 2.63E-82 | -1.69E-46 |
| MS.gene059770 | MS.gene81275 | -0.831349 | 1.76E-55 | -1.69E-46 |
| MS.gene059801 | MS.gene81275 | 0.818707 | 1.70E-52 | -1.69E-46 |
| MS.gene059837 | MS.gene81275 | 0.852917 | 3.37E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene81275 | 0.891136 | 5.23E-74 | -1.69E-46 |
| MS.gene059902 | MS.gene81275 | 0.835859 | 1.31E-56 | -1.69E-46 |
| MS.gene059953 | MS.gene81275 | -0.800758 | 1.24E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene81275 | 0.842139 | 3.10E-58 | -1.69E-46 |
| MS.gene060337 | MS.gene81275 | -0.816269 | 6.03E-52 | -1.69E-46 |
| MS.gene060341 | MS.gene81275 | 0.811737 | 6.03E-51 | -1.69E-46 |
| MS.gene060694 | MS.gene81275 | -0.813696 | 2.25E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene81275 | 0.888685 | 4.74E-73 | -1.69E-46 |
| MS.gene060728 | MS.gene81275 | 0.826506 | 2.61E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene81275 | 0.886598 | 2.97E-72 | -1.69E-46 |
| MS.gene060778 | MS.gene81275 | 0.840691 | 7.47E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene81275 | 0.918537 | 1.38E-86 | -1.69E-46 |
| MS.gene060823 | MS.gene81275 | -0.800373 | 1.49E-48 | -1.69E-46 |
| MS.gene060835 | MS.gene81275 | 0.823532 | 1.32E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene81275 | 0.868465 | 6.40E-66 | -1.69E-46 |
| MS.gene060982 | MS.gene81275 | 0.902138 | 1.32E-78 | -1.69E-46 |
| MS.gene061044 | MS.gene81275 | -0.82688 | 2.13E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene81275 | 0.89507 | 1.36E-75 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81275 | MS.gene003647 | PPI |
| MS.gene003645 | MS.gene81275 | PPI |
| MS.gene81275 | MS.gene23352 | PPI |
| MS.gene81275 | MS.gene50712 | PPI |
| MS.gene81275 | MS.gene23350 | PPI |
| MS.gene81275 | MS.gene062923 | PPI |
| MS.gene81275 | MS.gene062925 | PPI |
| MS.gene81275 | MS.gene50709 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81275.t1 | MTR_5g096670 | 98.599 | 357 | 5 | 0 | 1 | 357 | 1 | 357 | 0.0 | 723 |
| MS.gene81275.t1 | MTR_5g069055 | 78.212 | 358 | 77 | 1 | 1 | 357 | 1 | 358 | 0.0 | 582 |
| MS.gene81275.t1 | MTR_1g061050 | 77.374 | 358 | 80 | 1 | 1 | 357 | 1 | 358 | 0.0 | 570 |
| MS.gene81275.t1 | MTR_5g069050 | 74.212 | 349 | 74 | 2 | 10 | 357 | 51 | 384 | 0.0 | 526 |
| MS.gene81275.t1 | MTR_4g057670 | 57.507 | 353 | 146 | 3 | 6 | 357 | 51 | 400 | 2.64e-138 | 399 |
| MS.gene81275.t1 | MTR_4g071860 | 57.507 | 353 | 146 | 3 | 6 | 357 | 51 | 400 | 3.36e-138 | 399 |
| MS.gene81275.t1 | MTR_1g109200 | 55.840 | 351 | 151 | 3 | 8 | 357 | 44 | 391 | 4.92e-136 | 393 |
| MS.gene81275.t1 | MTR_4g071880 | 51.404 | 356 | 151 | 5 | 6 | 357 | 49 | 386 | 2.61e-115 | 340 |
| MS.gene81275.t1 | MTR_7g103920 | 64.583 | 96 | 9 | 1 | 112 | 207 | 11 | 81 | 3.59e-34 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81275.t1 | AT4G26530 | 86.592 | 358 | 47 | 1 | 1 | 357 | 1 | 358 | 0.0 | 634 |
| MS.gene81275.t1 | AT4G26530 | 86.592 | 358 | 47 | 1 | 1 | 357 | 1 | 358 | 0.0 | 634 |
| MS.gene81275.t1 | AT4G26530 | 86.592 | 358 | 47 | 1 | 1 | 357 | 1 | 358 | 0.0 | 634 |
| MS.gene81275.t1 | AT2G36460 | 79.609 | 358 | 72 | 1 | 1 | 357 | 1 | 358 | 0.0 | 587 |
| MS.gene81275.t1 | AT3G52930 | 80.447 | 358 | 69 | 1 | 1 | 357 | 1 | 358 | 0.0 | 586 |
| MS.gene81275.t1 | AT4G26520 | 79.330 | 358 | 73 | 1 | 1 | 357 | 1 | 358 | 0.0 | 575 |
| MS.gene81275.t1 | AT4G26520 | 79.494 | 356 | 72 | 1 | 1 | 355 | 1 | 356 | 0.0 | 571 |
| MS.gene81275.t1 | AT4G26520 | 79.143 | 350 | 72 | 1 | 9 | 357 | 6 | 355 | 0.0 | 561 |
| MS.gene81275.t1 | AT4G26520 | 79.143 | 350 | 72 | 1 | 9 | 357 | 6 | 355 | 0.0 | 561 |
| MS.gene81275.t1 | AT5G03690 | 76.045 | 359 | 84 | 2 | 1 | 357 | 1 | 359 | 0.0 | 540 |
| MS.gene81275.t1 | AT5G03690 | 76.504 | 349 | 80 | 2 | 11 | 357 | 45 | 393 | 0.0 | 528 |
| MS.gene81275.t1 | AT2G36460 | 79.026 | 267 | 55 | 1 | 92 | 357 | 1 | 267 | 2.56e-155 | 437 |
| MS.gene81275.t1 | AT2G36460 | 79.026 | 267 | 55 | 1 | 92 | 357 | 1 | 267 | 2.56e-155 | 437 |
| MS.gene81275.t1 | AT5G03690 | 76.404 | 267 | 61 | 2 | 93 | 357 | 1 | 267 | 4.26e-139 | 396 |
| MS.gene81275.t1 | AT5G03690 | 76.404 | 267 | 61 | 2 | 93 | 357 | 1 | 267 | 4.26e-139 | 396 |
| MS.gene81275.t1 | AT4G38970 | 57.550 | 351 | 145 | 3 | 8 | 357 | 51 | 398 | 5.03e-139 | 400 |
| MS.gene81275.t1 | AT2G21330 | 56.695 | 351 | 148 | 3 | 8 | 357 | 52 | 399 | 4.72e-138 | 398 |
| MS.gene81275.t1 | AT2G01140 | 55.524 | 353 | 153 | 3 | 6 | 357 | 42 | 391 | 8.70e-136 | 392 |
| MS.gene81275.t1 | AT2G21330 | 54.701 | 351 | 145 | 4 | 8 | 357 | 52 | 389 | 3.39e-129 | 375 |
| MS.gene81275.t1 | AT4G38970 | 57.588 | 257 | 107 | 2 | 8 | 263 | 51 | 306 | 2.06e-99 | 299 |
| MS.gene81275.t1 | AT2G21330 | 56.031 | 257 | 111 | 2 | 8 | 263 | 52 | 307 | 2.47e-98 | 294 |
Find 118 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGACACTTTCGTTCTCATT+TGG | 0.289922 | 5.2:+80989081 | MS.gene81275:CDS |
| TAAAGCTCAAGAGGTATTTC+TGG | 0.290855 | 5.2:+80989161 | MS.gene81275:CDS |
| TGTTAAGGACTATAAGTATT+AGG | 0.314080 | 5.2:+80989266 | MS.gene81275:CDS |
| GCTTCCCATCGGAGGAATTC+TGG | 0.334173 | 5.2:-80988161 | None:intergenic |
| TTCTGAGAGTTTATATGTTA+AGG | 0.341237 | 5.2:+80989251 | MS.gene81275:CDS |
| TTCAGTGACAGCAGCGCATT+TGG | 0.358382 | 5.2:-80988505 | None:intergenic |
| GGACACTTTCGTTCTCATTT+GGG | 0.360833 | 5.2:+80989082 | MS.gene81275:CDS |
| ACAATCCCCGGTACCGCGGC+TGG | 0.363608 | 5.2:-80988979 | None:intergenic |
| TATGGTGGTGGAAGTGGAAC+TGG | 0.368319 | 5.2:+80989222 | MS.gene81275:CDS |
| ATCATTCAGTGCCTTGTAAC+AGG | 0.375839 | 5.2:-80988541 | None:intergenic |
| GGATGACACCGGAGAGGTAT+TGG | 0.377053 | 5.2:-80988119 | None:intergenic |
| GCCAGGGGTGGCTATGTACT+TGG | 0.377454 | 5.2:-80987968 | None:intergenic |
| AACTGTCCCAGCCGCGGTAC+CGG | 0.386545 | 5.2:+80988972 | MS.gene81275:CDS |
| GAAGCTACTCTAGGCAAATA+TGG | 0.391926 | 5.2:+80989204 | MS.gene81275:CDS |
| CCAGCAAAACGCACAGGGCT+TGG | 0.395404 | 5.2:+80988398 | MS.gene81275:CDS |
| CTGGTATGACATTGTTCTCT+TGG | 0.404955 | 5.2:-80988200 | None:intergenic |
| CCCTTGTCAACTTTGATGCC+TGG | 0.408200 | 5.2:-80988219 | None:intergenic |
| GGCAAATATGGTGGTGGAAG+TGG | 0.408704 | 5.2:+80989216 | MS.gene81275:CDS |
| AAAATCTCAGGCTCAACAAT+AGG | 0.410743 | 5.2:-80988459 | None:intergenic |
| CACCCCTGGCAAGGGTATCT+TGG | 0.410912 | 5.2:+80987981 | MS.gene81275:CDS |
| GCCTAGAGTAGCTTCAGAAT+TGG | 0.410977 | 5.2:-80989196 | None:intergenic |
| GTATGACATTGTTCTCTTGG+AGG | 0.415484 | 5.2:-80988197 | None:intergenic |
| CTCCGGCCTTGTAGTACTGC+TGG | 0.419506 | 5.2:-80988311 | None:intergenic |
| GAACCTGGAGTAACCATGTT+AGG | 0.426285 | 5.2:-80988597 | None:intergenic |
| CTCCGGTGTCATCCTCTTTG+AGG | 0.427295 | 5.2:+80988128 | MS.gene81275:CDS |
| TCTTGGAGGATTTCAACAAA+AGG | 0.428975 | 5.2:-80988183 | None:intergenic |
| GATCCATCGGTTAAAATCTC+AGG | 0.430763 | 5.2:-80988471 | None:intergenic |
| CAAAGCATGTCGGCCTTTGT+TGG | 0.432883 | 5.2:+80987534 | None:intergenic |
| GATCAGCATGTCCTTCTTGA+AGG | 0.445985 | 5.2:+80988561 | MS.gene81275:CDS |
| GACAACTCAGAGGGCTCATT+GGG | 0.447754 | 5.2:-80988372 | None:intergenic |
| GAGAGGTATTGGAGTGCATT+GGG | 0.455590 | 5.2:-80988108 | None:intergenic |
| AGACAACTCAGAGGGCTCAT+TGG | 0.455669 | 5.2:-80988373 | None:intergenic |
| CCGGGGATTGTATTTCTGTC+AGG | 0.472014 | 5.2:+80988991 | MS.gene81275:CDS |
| ACTGTCCCAGCCGCGGTACC+GGG | 0.479499 | 5.2:+80988973 | MS.gene81275:CDS |
| AGCACACTCAAGACATGGGC+TGG | 0.480358 | 5.2:+80989120 | MS.gene81275:CDS |
| CTTGAGTACCGCACGCCACT+TGG | 0.484408 | 5.2:-80988343 | None:intergenic |
| GCCTTTGTTGGAAAGTATGC+AGG | 0.487704 | 5.2:+80987546 | MS.gene81275:CDS |
| AAGGGTGTTGTTGAATTAGC+TGG | 0.490593 | 5.2:+80988237 | MS.gene81275:CDS |
| GCTGCCAAGATACCCTTGCC+AGG | 0.495182 | 5.2:-80987985 | None:intergenic |
| TTCACGGAGGGCTTGACGGT+TGG | 0.495893 | 5.2:-80988070 | None:intergenic |
| GTCTATCCAGCAAAACGCAC+AGG | 0.499555 | 5.2:+80988392 | MS.gene81275:CDS |
| GAAGTTCACGGAGGGCTTGA+CGG | 0.504237 | 5.2:-80988074 | None:intergenic |
| TCCAAGAGAGTCAAAACCTT+GGG | 0.506085 | 5.2:-80988280 | None:intergenic |
| GCCATTCTCCTGGCAAATGA+TGG | 0.507357 | 5.2:-80988430 | None:intergenic |
| GATGAGAGCACTGGAACCAT+TGG | 0.508526 | 5.2:+80988009 | MS.gene81275:CDS |
| GTTGAATTAGCTGGAACAAA+TGG | 0.509964 | 5.2:+80988246 | MS.gene81275:CDS |
| ACCTTTGGGCTATCAGAACC+TGG | 0.510328 | 5.2:-80988612 | None:intergenic |
| GCCATCATTTGCCAGGAGAA+TGG | 0.511001 | 5.2:+80988429 | MS.gene81275:CDS |
| GGAGAGGTATTGGAGTGCAT+TGG | 0.512442 | 5.2:-80988109 | None:intergenic |
| TGGCGTGCGGTACTCAAGAT+TGG | 0.516046 | 5.2:+80988348 | MS.gene81275:CDS |
| CTGCCAAGATACCCTTGCCA+GGG | 0.516454 | 5.2:-80987984 | None:intergenic |
| TAGGCACAAGGCCATTCTCC+TGG | 0.518706 | 5.2:-80988440 | None:intergenic |
| TCGCTACGCCATCATTTGCC+AGG | 0.522141 | 5.2:+80988422 | MS.gene81275:CDS |
| GTATTGGAGTGCATTGGGAG+AGG | 0.525633 | 5.2:-80988103 | None:intergenic |
| AGGTGGACAAAGTGAAGAGC+AGG | 0.526814 | 5.2:+80989011 | MS.gene81275:CDS |
| CAATCCCCGGTACCGCGGCT+GGG | 0.528479 | 5.2:-80988978 | None:intergenic |
| TGGTGGAAGTGGAACTGGGT+TGG | 0.532441 | 5.2:+80989227 | MS.gene81275:CDS |
| AGCTAGATGTTGTGAAGCCA+TGG | 0.532979 | 5.2:+80989061 | MS.gene81275:CDS |
| GAGAGGTGAAGAGAAGTTCA+CGG | 0.536141 | 5.2:-80988086 | None:intergenic |
| CAGGTATCACCTGAGGTGAT+TGG | 0.538803 | 5.2:+80988922 | MS.gene81275:intron |
| CCACTTGGCAAACCGTGCTC+CGG | 0.542305 | 5.2:-80988328 | None:intergenic |
| GGCGATGTCATGAGATCCAT+CGG | 0.542710 | 5.2:-80988484 | None:intergenic |
| AGCAAAGCACACTCAAGACA+TGG | 0.549591 | 5.2:+80989115 | MS.gene81275:CDS |
| TGAGAAGAGTTCCTTCAAGA+AGG | 0.549810 | 5.2:-80988572 | None:intergenic |
| TACATAGCCACCCCTGGCAA+GGG | 0.556199 | 5.2:+80987973 | MS.gene81275:CDS |
| GGTAAAGAGTTTCCTCAAAG+AGG | 0.556676 | 5.2:-80988140 | None:intergenic |
| CAAGAGAACAATGTCATACC+AGG | 0.556695 | 5.2:+80988201 | MS.gene81275:CDS |
| GCTTGCTAGACGCTTGCCAA+TGG | 0.565429 | 5.2:-80988025 | None:intergenic |
| AAGCCTAACATGGTTACTCC+AGG | 0.566895 | 5.2:+80988594 | MS.gene81275:CDS |
| CTGTCCCAGCCGCGGTACCG+GGG | 0.567758 | 5.2:+80988974 | MS.gene81275:CDS |
| CTCCAAGAGAGTCAAAACCT+TGG | 0.567895 | 5.2:-80988281 | None:intergenic |
| AATGCACTCCAATACCTCTC+CGG | 0.571465 | 5.2:+80988111 | MS.gene81275:CDS |
| GTACATAGCCACCCCTGGCA+AGG | 0.572440 | 5.2:+80987972 | MS.gene81275:CDS |
| GCCAAGTACATAGCCACCCC+TGG | 0.573393 | 5.2:+80987967 | MS.gene81275:CDS |
| TGCCAGCAGTACTACAAGGC+CGG | 0.573670 | 5.2:+80988309 | MS.gene81275:CDS |
| TGTGCTTGCAGCCTGTTACA+AGG | 0.574695 | 5.2:+80988530 | MS.gene81275:CDS |
| AACAAAAGGCTTCCCATCGG+AGG | 0.574707 | 5.2:-80988169 | None:intergenic |
| AATGAGAACGAAAGTGTCCA+TGG | 0.576476 | 5.2:-80989078 | None:intergenic |
| GAATGTTGGTAAAGCTCAAG+AGG | 0.577411 | 5.2:+80989152 | MS.gene81275:CDS |
| GTGTACTCACCAATCACCTC+AGG | 0.577943 | 5.2:-80988931 | None:intergenic |
| ATGGTGGTGGAAGTGGAACT+GGG | 0.578626 | 5.2:+80989223 | MS.gene81275:CDS |
| AACTCTTCTCAAGCCTAACA+TGG | 0.582067 | 5.2:+80988584 | MS.gene81275:CDS |
| TTGGCAGCAGATGAGAGCAC+TGG | 0.583087 | 5.2:+80988000 | MS.gene81275:CDS |
| ACTCTAGGCAAATATGGTGG+TGG | 0.586057 | 5.2:+80989210 | MS.gene81275:CDS |
| GGTATTTCTGGCAAGATGCA+AGG | 0.586405 | 5.2:+80989173 | MS.gene81275:CDS |
| CAAGATACCCTTGCCAGGGG+TGG | 0.589488 | 5.2:-80987980 | None:intergenic |
| ACCAGGCATCAAAGTTGACA+AGG | 0.595336 | 5.2:+80988218 | MS.gene81275:CDS |
| CCTGACAGAAATACAATCCC+CGG | 0.595672 | 5.2:-80988991 | None:intergenic |
| CTTTACCAGAATTCCTCCGA+TGG | 0.596117 | 5.2:+80988156 | MS.gene81275:CDS |
| GGGATTGTATTTCTGTCAGG+TGG | 0.597741 | 5.2:+80988994 | MS.gene81275:CDS |
| GCCAATTCTGAAGCTACTCT+AGG | 0.598126 | 5.2:+80989195 | MS.gene81275:CDS |
| ACCTGCATACTTTCCAACAA+AGG | 0.607177 | 5.2:-80987547 | None:intergenic |
| TTTACCAGAATTCCTCCGAT+GGG | 0.613347 | 5.2:+80988157 | MS.gene81275:CDS |
| TGCTGGATAGACAACTCAGA+GGG | 0.616996 | 5.2:-80988381 | None:intergenic |
| GGTGAAGAGAAGTTCACGGA+GGG | 0.617088 | 5.2:-80988082 | None:intergenic |
| CCGGAGCACGGTTTGCCAAG+TGG | 0.620912 | 5.2:+80988328 | MS.gene81275:CDS |
| TTCAACAAAAGGCTTCCCAT+CGG | 0.623890 | 5.2:-80988172 | None:intergenic |
| TGCCAAGATACCCTTGCCAG+GGG | 0.625578 | 5.2:-80987983 | None:intergenic |
| GCTGGAAAGAAAGAGAATGT+TGG | 0.625630 | 5.2:+80989138 | MS.gene81275:CDS |
| TAGATGCCAGCAGTACTACA+AGG | 0.629007 | 5.2:+80988305 | MS.gene81275:CDS |
| ACGGTTTGCCAAGTGGCGTG+CGG | 0.639426 | 5.2:+80988335 | MS.gene81275:CDS |
| AATGGTGAAACAACAACCCA+AGG | 0.641211 | 5.2:+80988264 | MS.gene81275:CDS |
| AGTACTACAAGGCCGGAGCA+CGG | 0.644656 | 5.2:+80988316 | MS.gene81275:CDS |
| ACGCAGAACTGTCCCAGCCG+CGG | 0.649683 | 5.2:+80988966 | MS.gene81275:CDS |
| CAGGCTCAACAATAGGCACA+AGG | 0.650137 | 5.2:-80988452 | None:intergenic |
| AAATACAATCCCCGGTACCG+CGG | 0.654312 | 5.2:-80988983 | None:intergenic |
| TCTATCCAGCAAAACGCACA+GGG | 0.656184 | 5.2:+80988393 | MS.gene81275:CDS |
| GCAAAGCACACTCAAGACAT+GGG | 0.661511 | 5.2:+80989116 | MS.gene81275:CDS |
| TTGTGTGCAGGTATCACCTG+AGG | 0.664367 | 5.2:+80988915 | MS.gene81275:intron |
| TCCAGGTTCTGATAGCCCAA+AGG | 0.674535 | 5.2:+80988611 | MS.gene81275:CDS |
| TTCCTCAAAGAGGATGACAC+CGG | 0.677291 | 5.2:-80988130 | None:intergenic |
| CATCAACGTTGAGAACATTG+AGG | 0.688570 | 5.2:+80988047 | MS.gene81275:CDS |
| CAAAGAGGATGACACCGGAG+AGG | 0.703503 | 5.2:-80988125 | None:intergenic |
| CTAGCTTGTTCATTGCATCG+AGG | 0.707440 | 5.2:-80989044 | None:intergenic |
| GCTACTCTAGGCAAATATGG+TGG | 0.710878 | 5.2:+80989207 | MS.gene81275:CDS |
| CCAGGCATCAAAGTTGACAA+GGG | 0.714216 | 5.2:+80988219 | MS.gene81275:CDS |
| TTGCTGGATAGACAACTCAG+AGG | 0.728361 | 5.2:-80988382 | None:intergenic |
| AGGTGAAGAGAAGTTCACGG+AGG | 0.734150 | 5.2:-80988083 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAAAAAGAAATACA+AGG | - | chr5.2:80987757-80987776 | None:intergenic | 10.0% |
| !! | TTAAAACATTTATTTAAGAA+CGG | - | chr5.2:80987655-80987674 | None:intergenic | 10.0% |
| !!! | ATTATATAAACTTGTTAATG+AGG | - | chr5.2:80987905-80987924 | None:intergenic | 15.0% |
| !! | ACAAAATGTAAGAAATTAAC+GGG | + | chr5.2:80988784-80988803 | MS.gene81275:intron | 20.0% |
| !! | GACAAAATGTAAGAAATTAA+CGG | + | chr5.2:80988783-80988802 | MS.gene81275:intron | 20.0% |
| !!! | AAAAATTGAGTTTTACCTTT+GGG | - | chr5.2:80988629-80988648 | None:intergenic | 20.0% |
| !!! | TAAAAATTGAGTTTTACCTT+TGG | - | chr5.2:80988630-80988649 | None:intergenic | 20.0% |
| !!! | TATTATCTTTATTTACTCGA+GGG | + | chr5.2:80988836-80988855 | MS.gene81275:intron | 20.0% |
| !!! | TTATTATCTTTATTTACTCG+AGG | + | chr5.2:80988835-80988854 | MS.gene81275:intron | 20.0% |
| ! | AACATTTATTTAAGAACGGA+TGG | - | chr5.2:80987651-80987670 | None:intergenic | 25.0% |
| ! | AGCTTATATCAAAAGAAGAA+AGG | - | chr5.2:80987585-80987604 | None:intergenic | 25.0% |
| ! | CTTATATCAAAAGAAGAAAG+GGG | - | chr5.2:80987583-80987602 | None:intergenic | 25.0% |
| ! | GCATAATAATAGGAATTAAC+CGG | - | chr5.2:80988760-80988779 | None:intergenic | 25.0% |
| ! | GCTTATATCAAAAGAAGAAA+GGG | - | chr5.2:80987584-80987603 | None:intergenic | 25.0% |
| ! | GTTTATATAATAGTTGACTG+TGG | + | chr5.2:80987914-80987933 | MS.gene81275:intron | 25.0% |
| ! | TAATTGTTCTTGTATGTGTT+TGG | - | chr5.2:80987626-80987645 | None:intergenic | 25.0% |
| ! | TTATATCAAAAGAAGAAAGG+GGG | - | chr5.2:80987582-80987601 | None:intergenic | 25.0% |
| !! | TTCTGAGAGTTTATATGTTA+AGG | + | chr5.2:80989251-80989270 | MS.gene81275:CDS | 25.0% |
| !! | TTTTGTCGATGCATAATAAT+AGG | - | chr5.2:80988770-80988789 | None:intergenic | 25.0% |
| !!! | GTTTTTTTTCTTCATCATTC+CGG | + | chr5.2:80988738-80988757 | MS.gene81275:intron | 25.0% |
| ACATATCATGAACCATTTCT+AGG | - | chr5.2:80987858-80987877 | None:intergenic | 30.0% | |
| GTTAATGAGGATTGAAATTG+AGG | - | chr5.2:80987892-80987911 | None:intergenic | 30.0% | |
| TGAAACTAGTAACCTAGAAA+TGG | + | chr5.2:80987843-80987862 | MS.gene81275:intron | 30.0% | |
| !! | TATGCACTTCTTAATTTGTG+TGG | + | chr5.2:80987776-80987795 | MS.gene81275:intron | 30.0% |
| !! | TTCTTGTATGTGTTTGGTTT+TGG | - | chr5.2:80987620-80987639 | None:intergenic | 30.0% |
| AAAATCTCAGGCTCAACAAT+AGG | - | chr5.2:80988462-80988481 | None:intergenic | 35.0% | |
| GTTGAATTAGCTGGAACAAA+TGG | + | chr5.2:80988246-80988265 | MS.gene81275:CDS | 35.0% | |
| TCTTGGAGGATTTCAACAAA+AGG | - | chr5.2:80988186-80988205 | None:intergenic | 35.0% | |
| ! | CAATTTGCATTTTTGTGTGC+AGG | + | chr5.2:80988903-80988922 | MS.gene81275:intron | 35.0% |
| !! | TAAAGCTCAAGAGGTATTTC+TGG | + | chr5.2:80989161-80989180 | MS.gene81275:CDS | 35.0% |
| AACTCTTCTCAAGCCTAACA+TGG | + | chr5.2:80988584-80988603 | MS.gene81275:CDS | 40.0% | |
| AATGGTGAAACAACAACCCA+AGG | + | chr5.2:80988264-80988283 | MS.gene81275:CDS | 40.0% | |
| ACCTGCATACTTTCCAACAA+AGG | - | chr5.2:80987550-80987569 | None:intergenic | 40.0% | |
| ATCATTCAGTGCCTTGTAAC+AGG | - | chr5.2:80988544-80988563 | None:intergenic | 40.0% | |
| CAAGAGAACAATGTCATACC+AGG | + | chr5.2:80988201-80988220 | MS.gene81275:CDS | 40.0% | |
| CATCAACGTTGAGAACATTG+AGG | + | chr5.2:80988047-80988066 | MS.gene81275:CDS | 40.0% | |
| CTGGTATGACATTGTTCTCT+TGG | - | chr5.2:80988203-80988222 | None:intergenic | 40.0% | |
| GAAGCTACTCTAGGCAAATA+TGG | + | chr5.2:80989204-80989223 | MS.gene81275:CDS | 40.0% | |
| GCTGGAAAGAAAGAGAATGT+TGG | + | chr5.2:80989138-80989157 | MS.gene81275:CDS | 40.0% | |
| GGACACTTTCGTTCTCATTT+GGG | + | chr5.2:80989082-80989101 | MS.gene81275:CDS | 40.0% | |
| GGTAAAGAGTTTCCTCAAAG+AGG | - | chr5.2:80988143-80988162 | None:intergenic | 40.0% | |
| GTATGACATTGTTCTCTTGG+AGG | - | chr5.2:80988200-80988219 | None:intergenic | 40.0% | |
| GTGTAAGCTAGTGACAAGAT+TGG | - | chr5.2:80988668-80988687 | None:intergenic | 40.0% | |
| TCCAAGAGAGTCAAAACCTT+GGG | - | chr5.2:80988283-80988302 | None:intergenic | 40.0% | |
| TGAGAAGAGTTCCTTCAAGA+AGG | - | chr5.2:80988575-80988594 | None:intergenic | 40.0% | |
| TGGACACTTTCGTTCTCATT+TGG | + | chr5.2:80989081-80989100 | MS.gene81275:CDS | 40.0% | |
| TTCAACAAAAGGCTTCCCAT+CGG | - | chr5.2:80988175-80988194 | None:intergenic | 40.0% | |
| TTTACCAGAATTCCTCCGAT+GGG | + | chr5.2:80988157-80988176 | MS.gene81275:CDS | 40.0% | |
| ! | ACCTAGTGCGAGAGTTATTT+TGG | + | chr5.2:80987804-80987823 | MS.gene81275:intron | 40.0% |
| ! | GAATGTTGGTAAAGCTCAAG+AGG | + | chr5.2:80989152-80989171 | MS.gene81275:CDS | 40.0% |
| ! | GATCCATCGGTTAAAATCTC+AGG | - | chr5.2:80988474-80988493 | None:intergenic | 40.0% |
| !! | AAGGGTGTTGTTGAATTAGC+TGG | + | chr5.2:80988237-80988256 | MS.gene81275:CDS | 40.0% |
| !! | AATGAGAACGAAAGTGTCCA+TGG | - | chr5.2:80989081-80989100 | None:intergenic | 40.0% |
| !! | CCTAGTGCGAGAGTTATTTT+GGG | + | chr5.2:80987805-80987824 | MS.gene81275:intron | 40.0% |
| !!! | GAGAGTTATTTTGGGACAGA+GGG | + | chr5.2:80987813-80987832 | MS.gene81275:intron | 40.0% |
| AAGCCTAACATGGTTACTCC+AGG | + | chr5.2:80988594-80988613 | MS.gene81275:CDS | 45.0% | |
| AATGCACTCCAATACCTCTC+CGG | + | chr5.2:80988111-80988130 | MS.gene81275:CDS | 45.0% | |
| ACCAGGCATCAAAGTTGACA+AGG | + | chr5.2:80988218-80988237 | MS.gene81275:CDS | 45.0% | |
| ACTCTAGGCAAATATGGTGG+TGG | + | chr5.2:80989210-80989229 | MS.gene81275:CDS | 45.0% | |
| AGCAAAGCACACTCAAGACA+TGG | + | chr5.2:80989115-80989134 | MS.gene81275:CDS | 45.0% | |
| AGCTAGATGTTGTGAAGCCA+TGG | + | chr5.2:80989061-80989080 | MS.gene81275:CDS | 45.0% | |
| CCAGGCATCAAAGTTGACAA+GGG | + | chr5.2:80988219-80988238 | MS.gene81275:CDS | 45.0% | |
| CCCAAAATAACTCTCGCACT+AGG | - | chr5.2:80987808-80987827 | None:intergenic | 45.0% | |
| CCTGACAGAAATACAATCCC+CGG | - | chr5.2:80988994-80989013 | None:intergenic | 45.0% | |
| CTCCAAGAGAGTCAAAACCT+TGG | - | chr5.2:80988284-80988303 | None:intergenic | 45.0% | |
| CTTTACCAGAATTCCTCCGA+TGG | + | chr5.2:80988156-80988175 | MS.gene81275:CDS | 45.0% | |
| GAACCTGGAGTAACCATGTT+AGG | - | chr5.2:80988600-80988619 | None:intergenic | 45.0% | |
| GAGAGGTGAAGAGAAGTTCA+CGG | - | chr5.2:80988089-80988108 | None:intergenic | 45.0% | |
| GATCAGCATGTCCTTCTTGA+AGG | + | chr5.2:80988561-80988580 | MS.gene81275:CDS | 45.0% | |
| GCAAAGCACACTCAAGACAT+GGG | + | chr5.2:80989116-80989135 | MS.gene81275:CDS | 45.0% | |
| GCCTAGAGTAGCTTCAGAAT+TGG | - | chr5.2:80989199-80989218 | None:intergenic | 45.0% | |
| GCTACTCTAGGCAAATATGG+TGG | + | chr5.2:80989207-80989226 | MS.gene81275:CDS | 45.0% | |
| TAGATGCCAGCAGTACTACA+AGG | + | chr5.2:80988305-80988324 | MS.gene81275:CDS | 45.0% | |
| TCTATCCAGCAAAACGCACA+GGG | + | chr5.2:80988393-80988412 | MS.gene81275:CDS | 45.0% | |
| TGCTGGATAGACAACTCAGA+GGG | - | chr5.2:80988384-80988403 | None:intergenic | 45.0% | |
| TTCCTCAAAGAGGATGACAC+CGG | - | chr5.2:80988133-80988152 | None:intergenic | 45.0% | |
| TTGCTGGATAGACAACTCAG+AGG | - | chr5.2:80988385-80988404 | None:intergenic | 45.0% | |
| ! | GCCTTTGTTGGAAAGTATGC+AGG | + | chr5.2:80987546-80987565 | MS.gene81275:CDS | 45.0% |
| ! | GGGATTGTATTTCTGTCAGG+TGG | + | chr5.2:80988994-80989013 | MS.gene81275:CDS | 45.0% |
| !! | CTAGCTTGTTCATTGCATCG+AGG | - | chr5.2:80989047-80989066 | None:intergenic | 45.0% |
| !! | GAGAGGTATTGGAGTGCATT+GGG | - | chr5.2:80988111-80988130 | None:intergenic | 45.0% |
| !! | GAGCCTGAGATTTTAACCGA+TGG | + | chr5.2:80988468-80988487 | MS.gene81275:CDS | 45.0% |
| !! | GCCAATTCTGAAGCTACTCT+AGG | + | chr5.2:80989195-80989214 | MS.gene81275:CDS | 45.0% |
| !! | GGTATTTCTGGCAAGATGCA+AGG | + | chr5.2:80989173-80989192 | MS.gene81275:CDS | 45.0% |
| !!! | ACCCAAGGTTTTGACTCTCT+TGG | + | chr5.2:80988279-80988298 | MS.gene81275:CDS | 45.0% |
| !!! | CGAGAGTTATTTTGGGACAG+AGG | + | chr5.2:80987812-80987831 | MS.gene81275:intron | 45.0% |
| AAATACAATCCCCGGTACCG+CGG | - | chr5.2:80988986-80989005 | None:intergenic | 50.0% | |
| AACAAAAGGCTTCCCATCGG+AGG | - | chr5.2:80988172-80988191 | None:intergenic | 50.0% | |
| ACCTTTGGGCTATCAGAACC+TGG | - | chr5.2:80988615-80988634 | None:intergenic | 50.0% | |
| AGACAACTCAGAGGGCTCAT+TGG | - | chr5.2:80988376-80988395 | None:intergenic | 50.0% | |
| AGGTGAAGAGAAGTTCACGG+AGG | - | chr5.2:80988086-80988105 | None:intergenic | 50.0% | |
| AGGTGGACAAAGTGAAGAGC+AGG | + | chr5.2:80989011-80989030 | MS.gene81275:CDS | 50.0% | |
| CAGGCTCAACAATAGGCACA+AGG | - | chr5.2:80988455-80988474 | None:intergenic | 50.0% | |
| CAGGTATCACCTGAGGTGAT+TGG | + | chr5.2:80988922-80988941 | MS.gene81275:intron | 50.0% | |
| CCCTTGTCAACTTTGATGCC+TGG | - | chr5.2:80988222-80988241 | None:intergenic | 50.0% | |
| GACAACTCAGAGGGCTCATT+GGG | - | chr5.2:80988375-80988394 | None:intergenic | 50.0% | |
| GCCATCATTTGCCAGGAGAA+TGG | + | chr5.2:80988429-80988448 | MS.gene81275:CDS | 50.0% | |
| GCCATTCTCCTGGCAAATGA+TGG | - | chr5.2:80988433-80988452 | None:intergenic | 50.0% | |
| GGCGATGTCATGAGATCCAT+CGG | - | chr5.2:80988487-80988506 | None:intergenic | 50.0% | |
| GGTGAAGAGAAGTTCACGGA+GGG | - | chr5.2:80988085-80988104 | None:intergenic | 50.0% | |
| GTATTGGAGTGCATTGGGAG+AGG | - | chr5.2:80988106-80988125 | None:intergenic | 50.0% | |
| GTCTATCCAGCAAAACGCAC+AGG | + | chr5.2:80988392-80988411 | MS.gene81275:CDS | 50.0% | |
| GTGTACTCACCAATCACCTC+AGG | - | chr5.2:80988934-80988953 | None:intergenic | 50.0% | |
| TCGAGGGACAAAGTCAGAGA+GGG | + | chr5.2:80988852-80988871 | MS.gene81275:intron | 50.0% | |
| TGTGCTTGCAGCCTGTTACA+AGG | + | chr5.2:80988530-80988549 | MS.gene81275:CDS | 50.0% | |
| TTCAGTGACAGCAGCGCATT+TGG | - | chr5.2:80988508-80988527 | None:intergenic | 50.0% | |
| TTGTGTGCAGGTATCACCTG+AGG | + | chr5.2:80988915-80988934 | MS.gene81275:intron | 50.0% | |
| ! | CCGGGGATTGTATTTCTGTC+AGG | + | chr5.2:80988991-80989010 | MS.gene81275:CDS | 50.0% |
| ! | TCCAGGTTCTGATAGCCCAA+AGG | + | chr5.2:80988611-80988630 | MS.gene81275:CDS | 50.0% |
| !! | ATGGTGGTGGAAGTGGAACT+GGG | + | chr5.2:80989223-80989242 | MS.gene81275:CDS | 50.0% |
| !! | GATGAGAGCACTGGAACCAT+TGG | + | chr5.2:80988009-80988028 | MS.gene81275:CDS | 50.0% |
| !! | GGAGAGGTATTGGAGTGCAT+TGG | - | chr5.2:80988112-80988131 | None:intergenic | 50.0% |
| !! | GGCAAATATGGTGGTGGAAG+TGG | + | chr5.2:80989216-80989235 | MS.gene81275:CDS | 50.0% |
| !! | TATGGTGGTGGAAGTGGAAC+TGG | + | chr5.2:80989222-80989241 | MS.gene81275:CDS | 50.0% |
| AGCACACTCAAGACATGGGC+TGG | + | chr5.2:80989120-80989139 | MS.gene81275:CDS | 55.0% | |
| AGTACTACAAGGCCGGAGCA+CGG | + | chr5.2:80988316-80988335 | MS.gene81275:CDS | 55.0% | |
| CAAAGAGGATGACACCGGAG+AGG | - | chr5.2:80988128-80988147 | None:intergenic | 55.0% | |
| CTCGAGGGACAAAGTCAGAG+AGG | + | chr5.2:80988851-80988870 | MS.gene81275:intron | 55.0% | |
| CTGCCAAGATACCCTTGCCA+GGG | - | chr5.2:80987987-80988006 | None:intergenic | 55.0% | |
| GAAGTTCACGGAGGGCTTGA+CGG | - | chr5.2:80988077-80988096 | None:intergenic | 55.0% | |
| GCTTCCCATCGGAGGAATTC+TGG | - | chr5.2:80988164-80988183 | None:intergenic | 55.0% | |
| TACATAGCCACCCCTGGCAA+GGG | + | chr5.2:80987973-80987992 | MS.gene81275:CDS | 55.0% | |
| TAGGCACAAGGCCATTCTCC+TGG | - | chr5.2:80988443-80988462 | None:intergenic | 55.0% | |
| TCGCTACGCCATCATTTGCC+AGG | + | chr5.2:80988422-80988441 | MS.gene81275:CDS | 55.0% | |
| TGCCAAGATACCCTTGCCAG+GGG | - | chr5.2:80987986-80988005 | None:intergenic | 55.0% | |
| TGCCAGCAGTACTACAAGGC+CGG | + | chr5.2:80988309-80988328 | MS.gene81275:CDS | 55.0% | |
| TGGCGTGCGGTACTCAAGAT+TGG | + | chr5.2:80988348-80988367 | MS.gene81275:CDS | 55.0% | |
| TGGTGGAAGTGGAACTGGGT+TGG | + | chr5.2:80989227-80989246 | MS.gene81275:CDS | 55.0% | |
| ! | GCTTGCTAGACGCTTGCCAA+TGG | - | chr5.2:80988028-80988047 | None:intergenic | 55.0% |
| ! | GGATGACACCGGAGAGGTAT+TGG | - | chr5.2:80988122-80988141 | None:intergenic | 55.0% |
| ! | TTGGCAGCAGATGAGAGCAC+TGG | + | chr5.2:80988000-80988019 | MS.gene81275:CDS | 55.0% |
| !! | CTCCGGTGTCATCCTCTTTG+AGG | + | chr5.2:80988128-80988147 | MS.gene81275:CDS | 55.0% |
| ACGGTTTGCCAAGTGGCGTG+CGG | + | chr5.2:80988335-80988354 | MS.gene81275:CDS | 60.0% | |
| CAAGATACCCTTGCCAGGGG+TGG | - | chr5.2:80987983-80988002 | None:intergenic | 60.0% | |
| CCACTTGGCAAACCGTGCTC+CGG | - | chr5.2:80988331-80988350 | None:intergenic | 60.0% | |
| CCAGCAAAACGCACAGGGCT+TGG | + | chr5.2:80988398-80988417 | MS.gene81275:CDS | 60.0% | |
| GCCAAGTACATAGCCACCCC+TGG | + | chr5.2:80987967-80987986 | MS.gene81275:CDS | 60.0% | |
| GCCAGGGGTGGCTATGTACT+TGG | - | chr5.2:80987971-80987990 | None:intergenic | 60.0% | |
| GCTGCCAAGATACCCTTGCC+AGG | - | chr5.2:80987988-80988007 | None:intergenic | 60.0% | |
| GTACATAGCCACCCCTGGCA+AGG | + | chr5.2:80987972-80987991 | MS.gene81275:CDS | 60.0% | |
| TTCACGGAGGGCTTGACGGT+TGG | - | chr5.2:80988073-80988092 | None:intergenic | 60.0% | |
| ! | CCAAGCCCTGTGCGTTTTGC+TGG | - | chr5.2:80988401-80988420 | None:intergenic | 60.0% |
| ! | CTCCGGCCTTGTAGTACTGC+TGG | - | chr5.2:80988314-80988333 | None:intergenic | 60.0% |
| ! | CTTGAGTACCGCACGCCACT+TGG | - | chr5.2:80988346-80988365 | None:intergenic | 60.0% |
| !! | CACCCCTGGCAAGGGTATCT+TGG | + | chr5.2:80987981-80988000 | MS.gene81275:CDS | 60.0% |
| AACTGTCCCAGCCGCGGTAC+CGG | + | chr5.2:80988972-80988991 | MS.gene81275:CDS | 65.0% | |
| ACGCAGAACTGTCCCAGCCG+CGG | + | chr5.2:80988966-80988985 | MS.gene81275:CDS | 65.0% | |
| CCGGAGCACGGTTTGCCAAG+TGG | + | chr5.2:80988328-80988347 | MS.gene81275:CDS | 65.0% | |
| ACAATCCCCGGTACCGCGGC+TGG | - | chr5.2:80988982-80989001 | None:intergenic | 70.0% | |
| ACTGTCCCAGCCGCGGTACC+GGG | + | chr5.2:80988973-80988992 | MS.gene81275:CDS | 70.0% | |
| CAATCCCCGGTACCGCGGCT+GGG | - | chr5.2:80988981-80989000 | None:intergenic | 70.0% | |
| CTGTCCCAGCCGCGGTACCG+GGG | + | chr5.2:80988974-80988993 | MS.gene81275:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 80987540 | 80989287 | 80987540 | ID=MS.gene81275 |
| chr5.2 | mRNA | 80987540 | 80989287 | 80987540 | ID=MS.gene81275.t1;Parent=MS.gene81275 |
| chr5.2 | exon | 80987540 | 80987567 | 80987540 | ID=MS.gene81275.t1.exon1;Parent=MS.gene81275.t1 |
| chr5.2 | CDS | 80987540 | 80987567 | 80987540 | ID=cds.MS.gene81275.t1;Parent=MS.gene81275.t1 |
| chr5.2 | exon | 80987950 | 80988632 | 80987950 | ID=MS.gene81275.t1.exon2;Parent=MS.gene81275.t1 |
| chr5.2 | CDS | 80987950 | 80988632 | 80987950 | ID=cds.MS.gene81275.t1;Parent=MS.gene81275.t1 |
| chr5.2 | exon | 80988925 | 80989287 | 80988925 | ID=MS.gene81275.t1.exon3;Parent=MS.gene81275.t1 |
| chr5.2 | CDS | 80988925 | 80989287 | 80988925 | ID=cds.MS.gene81275.t1;Parent=MS.gene81275.t1 |
| Gene Sequence |
| Protein sequence |
