Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38250.t1 | XP_003617895.1 | 98.6 | 357 | 5 | 0 | 1 | 357 | 1 | 357 | 4.00E-197 | 697.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38250.t1 | P46256 | 96.9 | 357 | 11 | 0 | 1 | 357 | 1 | 357 | 1.1e-195 | 683.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38250.t1 | G7K4T4 | 98.6 | 357 | 5 | 0 | 1 | 357 | 1 | 357 | 2.9e-197 | 697.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene38250 | 0.815187 | 1.05E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene38250 | 0.935651 | 6.07E-97 | -1.69E-46 |
| MS.gene049173 | MS.gene38250 | 0.835526 | 1.59E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene38250 | 0.848485 | 5.95E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene38250 | 0.883286 | 5.10E-71 | -1.69E-46 |
| MS.gene049232 | MS.gene38250 | 0.815656 | 8.27E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene38250 | -0.83755 | 4.87E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene38250 | 0.921092 | 5.57E-88 | -1.69E-46 |
| MS.gene049320 | MS.gene38250 | 0.920592 | 1.05E-87 | -1.69E-46 |
| MS.gene04939 | MS.gene38250 | 0.828801 | 7.35E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene38250 | 0.877299 | 7.02E-69 | -1.69E-46 |
| MS.gene049627 | MS.gene38250 | 0.805981 | 1.03E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene38250 | 0.878491 | 2.69E-69 | -1.69E-46 |
| MS.gene049805 | MS.gene38250 | 0.824055 | 9.93E-54 | -1.69E-46 |
| MS.gene049865 | MS.gene38250 | 0.806715 | 7.19E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene38250 | 0.87622 | 1.66E-68 | -1.69E-46 |
| MS.gene050163 | MS.gene38250 | 0.883272 | 5.16E-71 | -1.69E-46 |
| MS.gene050165 | MS.gene38250 | 0.879814 | 9.16E-70 | -1.69E-46 |
| MS.gene050170 | MS.gene38250 | 0.886061 | 4.75E-72 | -1.69E-46 |
| MS.gene050323 | MS.gene38250 | 0.871898 | 4.81E-67 | -1.69E-46 |
| MS.gene050333 | MS.gene38250 | 0.853006 | 3.18E-61 | -1.69E-46 |
| MS.gene050444 | MS.gene38250 | 0.83442 | 3.03E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene38250 | 0.88792 | 9.34E-73 | -1.69E-46 |
| MS.gene050504 | MS.gene38250 | 0.916307 | 2.08E-85 | -1.69E-46 |
| MS.gene050518 | MS.gene38250 | 0.886386 | 3.58E-72 | -1.69E-46 |
| MS.gene050538 | MS.gene38250 | 0.826986 | 2.01E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene38250 | 0.920464 | 1.24E-87 | -1.69E-46 |
| MS.gene050593 | MS.gene38250 | 0.81168 | 6.20E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene38250 | 0.918489 | 1.46E-86 | -1.69E-46 |
| MS.gene050675 | MS.gene38250 | 0.885676 | 6.62E-72 | -1.69E-46 |
| MS.gene050699 | MS.gene38250 | 0.946261 | 6.46E-105 | -1.69E-46 |
| MS.gene050747 | MS.gene38250 | 0.854087 | 1.55E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene38250 | 0.895067 | 1.36E-75 | -1.69E-46 |
| MS.gene05080 | MS.gene38250 | 0.851001 | 1.18E-60 | -1.69E-46 |
| MS.gene05081 | MS.gene38250 | 0.831892 | 1.29E-55 | -1.69E-46 |
| MS.gene050832 | MS.gene38250 | -0.803703 | 3.07E-49 | -1.69E-46 |
| MS.gene050833 | MS.gene38250 | -0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene38250 | 0.851778 | 7.11E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene38250 | 0.847467 | 1.14E-59 | -1.69E-46 |
| MS.gene050876 | MS.gene38250 | 0.831648 | 1.48E-55 | -1.69E-46 |
| MS.gene050883 | MS.gene38250 | -0.80225 | 6.13E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene38250 | 0.843918 | 1.04E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene38250 | 0.849106 | 4.00E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene38250 | 0.90824 | 2.12E-81 | -1.69E-46 |
| MS.gene05100 | MS.gene38250 | 0.858011 | 1.10E-62 | -1.69E-46 |
| MS.gene051044 | MS.gene38250 | -0.802991 | 4.31E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene38250 | -0.807371 | 5.22E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene38250 | -0.801508 | 8.71E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene38250 | 0.896051 | 5.35E-76 | -1.69E-46 |
| MS.gene051336 | MS.gene38250 | 0.829937 | 3.89E-55 | -1.69E-46 |
| MS.gene051364 | MS.gene38250 | -0.833356 | 5.59E-56 | -1.69E-46 |
| MS.gene051366 | MS.gene38250 | -0.827478 | 1.53E-54 | -1.69E-46 |
| MS.gene051517 | MS.gene38250 | -0.800824 | 1.20E-48 | -1.69E-46 |
| MS.gene051551 | MS.gene38250 | 0.884189 | 2.37E-71 | -1.69E-46 |
| MS.gene051651 | MS.gene38250 | -0.836952 | 6.92E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene38250 | 0.804044 | 2.61E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene38250 | 0.885654 | 6.75E-72 | -1.69E-46 |
| MS.gene051838 | MS.gene38250 | 0.845897 | 3.05E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene38250 | 0.838612 | 2.59E-57 | -1.69E-46 |
| MS.gene051949 | MS.gene38250 | 0.840816 | 6.92E-58 | -1.69E-46 |
| MS.gene051973 | MS.gene38250 | -0.813297 | 2.75E-51 | -1.69E-46 |
| MS.gene052129 | MS.gene38250 | -0.800247 | 1.58E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene38250 | 0.852453 | 4.57E-61 | -1.69E-46 |
| MS.gene052271 | MS.gene38250 | 0.821262 | 4.43E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene38250 | 0.866371 | 3.00E-65 | -1.69E-46 |
| MS.gene052486 | MS.gene38250 | 0.876202 | 1.68E-68 | -1.69E-46 |
| MS.gene052501 | MS.gene38250 | 0.827196 | 1.79E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene38250 | 0.895811 | 6.72E-76 | -1.69E-46 |
| MS.gene052504 | MS.gene38250 | 0.814706 | 1.34E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene38250 | 0.803269 | 3.78E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene38250 | 0.860958 | 1.44E-63 | -1.69E-46 |
| MS.gene052615 | MS.gene38250 | 0.871397 | 7.05E-67 | -1.69E-46 |
| MS.gene052820 | MS.gene38250 | 0.80596 | 1.04E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene38250 | 0.869435 | 3.10E-66 | -1.69E-46 |
| MS.gene052823 | MS.gene38250 | 0.892673 | 1.28E-74 | -1.69E-46 |
| MS.gene052825 | MS.gene38250 | 0.890627 | 8.30E-74 | -1.69E-46 |
| MS.gene052870 | MS.gene38250 | 0.808193 | 3.49E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene38250 | 0.836491 | 9.07E-57 | -1.69E-46 |
| MS.gene052916 | MS.gene38250 | 0.813595 | 2.36E-51 | -1.69E-46 |
| MS.gene052937 | MS.gene38250 | -0.801784 | 7.65E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene38250 | 0.830918 | 2.24E-55 | -1.69E-46 |
| MS.gene053117 | MS.gene38250 | 0.80126 | 9.79E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene38250 | 0.882076 | 1.41E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene38250 | 0.835169 | 1.96E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene38250 | 0.893177 | 8.01E-75 | -1.69E-46 |
| MS.gene053286 | MS.gene38250 | 0.890999 | 5.92E-74 | -1.69E-46 |
| MS.gene053420 | MS.gene38250 | -0.80673 | 7.14E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene38250 | 0.852247 | 5.23E-61 | -1.69E-46 |
| MS.gene053479 | MS.gene38250 | 0.858304 | 9.03E-63 | -1.69E-46 |
| MS.gene053480 | MS.gene38250 | 0.891334 | 4.37E-74 | -1.69E-46 |
| MS.gene053561 | MS.gene38250 | -0.800212 | 1.60E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene38250 | 0.85415 | 1.49E-61 | -1.69E-46 |
| MS.gene053632 | MS.gene38250 | 0.882284 | 1.19E-70 | -1.69E-46 |
| MS.gene053824 | MS.gene38250 | 0.879452 | 1.23E-69 | -1.69E-46 |
| MS.gene053916 | MS.gene38250 | 0.833021 | 6.77E-56 | -1.69E-46 |
| MS.gene054343 | MS.gene38250 | 0.850806 | 1.34E-60 | -1.69E-46 |
| MS.gene054344 | MS.gene38250 | 0.871687 | 5.65E-67 | -1.69E-46 |
| MS.gene054408 | MS.gene38250 | 0.837999 | 3.73E-57 | -1.69E-46 |
| MS.gene054555 | MS.gene38250 | -0.806125 | 9.57E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene38250 | 0.843917 | 1.04E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene38250 | 0.886262 | 3.98E-72 | -1.69E-46 |
| MS.gene054642 | MS.gene38250 | 0.899606 | 1.68E-77 | -1.69E-46 |
| MS.gene054706 | MS.gene38250 | -0.819966 | 8.80E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene38250 | 0.909207 | 7.35E-82 | -1.69E-46 |
| MS.gene054884 | MS.gene38250 | -0.81144 | 6.99E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene38250 | 0.819568 | 1.08E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene38250 | 0.918847 | 9.39E-87 | -1.69E-46 |
| MS.gene054959 | MS.gene38250 | -0.845014 | 5.29E-59 | -1.69E-46 |
| MS.gene055134 | MS.gene38250 | -0.802007 | 6.88E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene38250 | -0.826131 | 3.21E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene38250 | 0.86572 | 4.81E-65 | -1.69E-46 |
| MS.gene055224 | MS.gene38250 | 0.807546 | 4.79E-50 | -1.69E-46 |
| MS.gene055251 | MS.gene38250 | -0.831502 | 1.61E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene38250 | 0.827313 | 1.68E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene38250 | 0.933084 | 3.22E-95 | -1.69E-46 |
| MS.gene055502 | MS.gene38250 | 0.917149 | 7.55E-86 | -1.69E-46 |
| MS.gene055577 | MS.gene38250 | 0.895984 | 5.70E-76 | -1.69E-46 |
| MS.gene055719 | MS.gene38250 | -0.820182 | 7.85E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene38250 | 0.838287 | 3.15E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene38250 | 0.882494 | 9.94E-71 | -1.69E-46 |
| MS.gene055750 | MS.gene38250 | 0.867916 | 9.62E-66 | -1.69E-46 |
| MS.gene055751 | MS.gene38250 | 0.8843 | 2.16E-71 | -1.69E-46 |
| MS.gene055776 | MS.gene38250 | 0.870529 | 1.36E-66 | -1.69E-46 |
| MS.gene05589 | MS.gene38250 | 0.896912 | 2.34E-76 | -1.69E-46 |
| MS.gene055941 | MS.gene38250 | 0.848891 | 4.59E-60 | -1.69E-46 |
| MS.gene055942 | MS.gene38250 | -0.816403 | 5.63E-52 | -1.69E-46 |
| MS.gene055956 | MS.gene38250 | -0.842204 | 2.98E-58 | -1.69E-46 |
| MS.gene056046 | MS.gene38250 | 0.813308 | 2.73E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene38250 | 0.825507 | 4.51E-54 | -1.69E-46 |
| MS.gene056266 | MS.gene38250 | 0.803289 | 3.74E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene38250 | 0.854067 | 1.58E-61 | -1.69E-46 |
| MS.gene056409 | MS.gene38250 | 0.815845 | 7.50E-52 | -1.69E-46 |
| MS.gene056446 | MS.gene38250 | 0.81161 | 6.42E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene38250 | 0.915548 | 5.16E-85 | -1.69E-46 |
| MS.gene056510 | MS.gene38250 | 0.886365 | 3.64E-72 | -1.69E-46 |
| MS.gene056550 | MS.gene38250 | -0.829474 | 5.04E-55 | -1.69E-46 |
| MS.gene056610 | MS.gene38250 | 0.839237 | 1.79E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene38250 | 0.915752 | 4.05E-85 | -1.69E-46 |
| MS.gene056692 | MS.gene38250 | 0.887256 | 1.67E-72 | -1.69E-46 |
| MS.gene056761 | MS.gene38250 | -0.808057 | 3.73E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene38250 | -0.801846 | 7.42E-49 | -1.69E-46 |
| MS.gene056898 | MS.gene38250 | 0.812987 | 3.21E-51 | -1.69E-46 |
| MS.gene056946 | MS.gene38250 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene056988 | MS.gene38250 | -0.807703 | 4.44E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene38250 | -0.800404 | 1.46E-48 | -1.69E-46 |
| MS.gene057048 | MS.gene38250 | 0.806673 | 7.34E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene38250 | 0.835389 | 1.73E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene38250 | 0.801341 | 9.43E-49 | -1.69E-46 |
| MS.gene057196 | MS.gene38250 | 0.844696 | 6.44E-59 | -1.69E-46 |
| MS.gene057331 | MS.gene38250 | 0.828242 | 1.00E-54 | -1.69E-46 |
| MS.gene057332 | MS.gene38250 | 0.859645 | 3.58E-63 | -1.69E-46 |
| MS.gene057416 | MS.gene38250 | 0.856054 | 4.17E-62 | -1.69E-46 |
| MS.gene057658 | MS.gene38250 | 0.881076 | 3.24E-70 | -1.69E-46 |
| MS.gene057831 | MS.gene38250 | 0.873121 | 1.88E-67 | -1.69E-46 |
| MS.gene058019 | MS.gene38250 | 0.811433 | 7.02E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene38250 | -0.870464 | 1.43E-66 | -1.69E-46 |
| MS.gene058338 | MS.gene38250 | 0.861846 | 7.70E-64 | -1.69E-46 |
| MS.gene05837 | MS.gene38250 | 0.868398 | 6.72E-66 | -1.69E-46 |
| MS.gene058382 | MS.gene38250 | -0.812452 | 4.21E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene38250 | 0.939592 | 9.80E-100 | -1.69E-46 |
| MS.gene058544 | MS.gene38250 | 0.909995 | 3.07E-82 | -1.69E-46 |
| MS.gene058603 | MS.gene38250 | -0.813883 | 2.04E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene38250 | 0.880374 | 5.78E-70 | -1.69E-46 |
| MS.gene058773 | MS.gene38250 | 0.870995 | 9.57E-67 | -1.69E-46 |
| MS.gene058838 | MS.gene38250 | 0.901911 | 1.66E-78 | -1.69E-46 |
| MS.gene05883 | MS.gene38250 | 0.807804 | 4.23E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene38250 | 0.926883 | 2.54E-91 | -1.69E-46 |
| MS.gene059023 | MS.gene38250 | 0.923811 | 1.62E-89 | -1.69E-46 |
| MS.gene059029 | MS.gene38250 | 0.809463 | 1.87E-50 | -1.69E-46 |
| MS.gene059103 | MS.gene38250 | -0.815362 | 9.61E-52 | -1.69E-46 |
| MS.gene05912 | MS.gene38250 | 0.819145 | 1.35E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene38250 | 0.816947 | 4.25E-52 | -1.69E-46 |
| MS.gene05914 | MS.gene38250 | 0.870851 | 1.07E-66 | -1.69E-46 |
| MS.gene05934 | MS.gene38250 | 0.829945 | 3.87E-55 | -1.69E-46 |
| MS.gene059480 | MS.gene38250 | -0.816647 | 4.96E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene38250 | 0.826157 | 3.16E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene38250 | 0.94134 | 4.93E-101 | -1.69E-46 |
| MS.gene059718 | MS.gene38250 | 0.893499 | 5.94E-75 | -1.69E-46 |
| MS.gene059756 | MS.gene38250 | 0.914059 | 2.99E-84 | -1.69E-46 |
| MS.gene059770 | MS.gene38250 | -0.835324 | 1.79E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene38250 | 0.820112 | 8.15E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene38250 | 0.85763 | 1.43E-62 | -1.69E-46 |
| MS.gene059865 | MS.gene38250 | 0.891189 | 4.98E-74 | -1.69E-46 |
| MS.gene059902 | MS.gene38250 | 0.83559 | 1.54E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene38250 | 0.848033 | 7.93E-60 | -1.69E-46 |
| MS.gene060337 | MS.gene38250 | -0.807794 | 4.25E-50 | -1.69E-46 |
| MS.gene060341 | MS.gene38250 | 0.806053 | 9.92E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene38250 | -0.803501 | 3.38E-49 | -1.69E-46 |
| MS.gene060694 | MS.gene38250 | -0.814184 | 1.75E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene38250 | 0.888371 | 6.27E-73 | -1.69E-46 |
| MS.gene060728 | MS.gene38250 | 0.821631 | 3.64E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene38250 | 0.884984 | 1.20E-71 | -1.69E-46 |
| MS.gene060778 | MS.gene38250 | 0.840914 | 6.52E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene38250 | 0.921424 | 3.64E-88 | -1.69E-46 |
| MS.gene060823 | MS.gene38250 | -0.808994 | 2.36E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene38250 | 0.824292 | 8.74E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene38250 | 0.872904 | 2.22E-67 | -1.69E-46 |
| MS.gene060982 | MS.gene38250 | 0.90255 | 8.65E-79 | -1.69E-46 |
| MS.gene061044 | MS.gene38250 | -0.837376 | 5.39E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene38250 | 0.894305 | 2.79E-75 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38250 | MS.gene003647 | PPI |
| MS.gene38250 | MS.gene50712 | PPI |
| MS.gene38250 | MS.gene50709 | PPI |
| MS.gene38250 | MS.gene062923 | PPI |
| MS.gene003645 | MS.gene38250 | PPI |
| MS.gene38250 | MS.gene062925 | PPI |
| MS.gene23350 | MS.gene38250 | PPI |
| MS.gene38250 | MS.gene23352 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38250.t1 | MTR_5g096670 | 98.599 | 357 | 5 | 0 | 1 | 357 | 1 | 357 | 0.0 | 723 |
| MS.gene38250.t1 | MTR_5g069055 | 78.212 | 358 | 77 | 1 | 1 | 357 | 1 | 358 | 0.0 | 582 |
| MS.gene38250.t1 | MTR_1g061050 | 77.374 | 358 | 80 | 1 | 1 | 357 | 1 | 358 | 0.0 | 570 |
| MS.gene38250.t1 | MTR_5g069050 | 74.212 | 349 | 74 | 2 | 10 | 357 | 51 | 384 | 0.0 | 526 |
| MS.gene38250.t1 | MTR_4g057670 | 57.507 | 353 | 146 | 3 | 6 | 357 | 51 | 400 | 2.64e-138 | 399 |
| MS.gene38250.t1 | MTR_4g071860 | 57.507 | 353 | 146 | 3 | 6 | 357 | 51 | 400 | 3.36e-138 | 399 |
| MS.gene38250.t1 | MTR_1g109200 | 55.840 | 351 | 151 | 3 | 8 | 357 | 44 | 391 | 4.92e-136 | 393 |
| MS.gene38250.t1 | MTR_4g071880 | 51.404 | 356 | 151 | 5 | 6 | 357 | 49 | 386 | 2.61e-115 | 340 |
| MS.gene38250.t1 | MTR_7g103920 | 64.583 | 96 | 9 | 1 | 112 | 207 | 11 | 81 | 3.59e-34 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38250.t1 | AT4G26530 | 86.592 | 358 | 47 | 1 | 1 | 357 | 1 | 358 | 0.0 | 634 |
| MS.gene38250.t1 | AT4G26530 | 86.592 | 358 | 47 | 1 | 1 | 357 | 1 | 358 | 0.0 | 634 |
| MS.gene38250.t1 | AT4G26530 | 86.592 | 358 | 47 | 1 | 1 | 357 | 1 | 358 | 0.0 | 634 |
| MS.gene38250.t1 | AT2G36460 | 79.609 | 358 | 72 | 1 | 1 | 357 | 1 | 358 | 0.0 | 587 |
| MS.gene38250.t1 | AT3G52930 | 80.447 | 358 | 69 | 1 | 1 | 357 | 1 | 358 | 0.0 | 586 |
| MS.gene38250.t1 | AT4G26520 | 79.330 | 358 | 73 | 1 | 1 | 357 | 1 | 358 | 0.0 | 575 |
| MS.gene38250.t1 | AT4G26520 | 79.494 | 356 | 72 | 1 | 1 | 355 | 1 | 356 | 0.0 | 571 |
| MS.gene38250.t1 | AT4G26520 | 79.143 | 350 | 72 | 1 | 9 | 357 | 6 | 355 | 0.0 | 561 |
| MS.gene38250.t1 | AT4G26520 | 79.143 | 350 | 72 | 1 | 9 | 357 | 6 | 355 | 0.0 | 561 |
| MS.gene38250.t1 | AT5G03690 | 76.045 | 359 | 84 | 2 | 1 | 357 | 1 | 359 | 0.0 | 540 |
| MS.gene38250.t1 | AT5G03690 | 76.504 | 349 | 80 | 2 | 11 | 357 | 45 | 393 | 0.0 | 528 |
| MS.gene38250.t1 | AT2G36460 | 79.026 | 267 | 55 | 1 | 92 | 357 | 1 | 267 | 2.56e-155 | 437 |
| MS.gene38250.t1 | AT2G36460 | 79.026 | 267 | 55 | 1 | 92 | 357 | 1 | 267 | 2.56e-155 | 437 |
| MS.gene38250.t1 | AT5G03690 | 76.404 | 267 | 61 | 2 | 93 | 357 | 1 | 267 | 4.26e-139 | 396 |
| MS.gene38250.t1 | AT5G03690 | 76.404 | 267 | 61 | 2 | 93 | 357 | 1 | 267 | 4.26e-139 | 396 |
| MS.gene38250.t1 | AT4G38970 | 57.550 | 351 | 145 | 3 | 8 | 357 | 51 | 398 | 5.03e-139 | 400 |
| MS.gene38250.t1 | AT2G21330 | 56.695 | 351 | 148 | 3 | 8 | 357 | 52 | 399 | 4.72e-138 | 398 |
| MS.gene38250.t1 | AT2G01140 | 55.524 | 353 | 153 | 3 | 6 | 357 | 42 | 391 | 8.70e-136 | 392 |
| MS.gene38250.t1 | AT2G21330 | 54.701 | 351 | 145 | 4 | 8 | 357 | 52 | 389 | 3.39e-129 | 375 |
| MS.gene38250.t1 | AT4G38970 | 57.588 | 257 | 107 | 2 | 8 | 263 | 51 | 306 | 2.06e-99 | 299 |
| MS.gene38250.t1 | AT2G21330 | 56.031 | 257 | 111 | 2 | 8 | 263 | 52 | 307 | 2.47e-98 | 294 |
Find 119 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGACACTTTCGTTCTCATT+TGG | 0.289922 | 5.3:+78054594 | MS.gene38250:CDS |
| TAAAGCTCAAGAGGTATTTC+TGG | 0.290855 | 5.3:+78054674 | MS.gene38250:CDS |
| TGTTAAGGACTATAAGTATT+AGG | 0.314080 | 5.3:+78054779 | MS.gene38250:CDS |
| GCTTCCCATCGGAGGAATTC+TGG | 0.334173 | 5.3:-78053674 | None:intergenic |
| TTCTGAGAGTTTATATGTTA+AGG | 0.341237 | 5.3:+78054764 | MS.gene38250:CDS |
| TTCAGTGACAGCAGCGCATT+TGG | 0.358382 | 5.3:-78054018 | None:intergenic |
| GGACACTTTCGTTCTCATTT+GGG | 0.360833 | 5.3:+78054595 | MS.gene38250:CDS |
| GACAACTCAGAGGGCTCATT+GGG | 0.363446 | 5.3:-78053885 | None:intergenic |
| ACAATCCCCGGTACCGCGGC+TGG | 0.363608 | 5.3:-78054492 | None:intergenic |
| TATGGTGGTGGAAGTGGAAC+TGG | 0.368319 | 5.3:+78054735 | MS.gene38250:CDS |
| ATCATTCAGTGCCTTGTAAC+AGG | 0.375839 | 5.3:-78054054 | None:intergenic |
| GGATGACACCGGAGAGGTAT+TGG | 0.377053 | 5.3:-78053632 | None:intergenic |
| GCCAGGGGTGGCTATGTACT+TGG | 0.377454 | 5.3:-78053481 | None:intergenic |
| AACTGTCCCAGCCGCGGTAC+CGG | 0.386545 | 5.3:+78054485 | MS.gene38250:CDS |
| GAAGCTACTCTAGGCAAATA+TGG | 0.391926 | 5.3:+78054717 | MS.gene38250:CDS |
| CCAGCAAAACGCACAGGGCT+TGG | 0.395404 | 5.3:+78053911 | MS.gene38250:CDS |
| CTGGTATGACATTGTTCTCT+TGG | 0.404955 | 5.3:-78053713 | None:intergenic |
| CCCTTGTCAACTTTGATGCC+TGG | 0.408200 | 5.3:-78053732 | None:intergenic |
| GGCAAATATGGTGGTGGAAG+TGG | 0.408704 | 5.3:+78054729 | MS.gene38250:CDS |
| AAAATCTCAGGCTCAACAAT+AGG | 0.410743 | 5.3:-78053972 | None:intergenic |
| CACCCCTGGCAAGGGTATCT+TGG | 0.410912 | 5.3:+78053494 | MS.gene38250:CDS |
| GCCTAGAGTAGCTTCAGAAT+TGG | 0.410977 | 5.3:-78054709 | None:intergenic |
| GTATGACATTGTTCTCTTGG+AGG | 0.415484 | 5.3:-78053710 | None:intergenic |
| CTCCGGCCTTGTAGTACTGC+TGG | 0.419506 | 5.3:-78053824 | None:intergenic |
| GAACCTGGAGTAACCATGTT+AGG | 0.426285 | 5.3:-78054110 | None:intergenic |
| CTCCGGTGTCATCCTCTTTG+AGG | 0.427295 | 5.3:+78053641 | MS.gene38250:CDS |
| TCTTGGAGGATTTCAACAAA+AGG | 0.428975 | 5.3:-78053696 | None:intergenic |
| GATCCATCGGTTAAAATCTC+AGG | 0.430763 | 5.3:-78053984 | None:intergenic |
| CAAAGCATGTCGGCCTTTGT+TGG | 0.432883 | 5.3:+78053047 | None:intergenic |
| AGACAACTCAGAGGGCTCAT+TGG | 0.443250 | 5.3:-78053886 | None:intergenic |
| GATCAGCATGTCCTTCTTGA+AGG | 0.445985 | 5.3:+78054074 | MS.gene38250:CDS |
| GAGAGGTATTGGAGTGCATT+GGG | 0.455590 | 5.3:-78053621 | None:intergenic |
| CCGGGGATTGTATTTCTGTC+AGG | 0.472014 | 5.3:+78054504 | MS.gene38250:CDS |
| ACTGTCCCAGCCGCGGTACC+GGG | 0.479499 | 5.3:+78054486 | MS.gene38250:CDS |
| AGCACACTCAAGACATGGGC+TGG | 0.480358 | 5.3:+78054633 | MS.gene38250:CDS |
| CTTGAGTACCGCACGCCACT+TGG | 0.484408 | 5.3:-78053856 | None:intergenic |
| GCCTTTGTTGGAAAGTATGC+AGG | 0.487704 | 5.3:+78053059 | MS.gene38250:CDS |
| AAGGGTGTTGTTGAATTAGC+TGG | 0.490593 | 5.3:+78053750 | MS.gene38250:CDS |
| GCTGCCAAGATACCCTTGCC+AGG | 0.495182 | 5.3:-78053498 | None:intergenic |
| TTCACGGAGGGCTTGACGGT+TGG | 0.495893 | 5.3:-78053583 | None:intergenic |
| GTCTATCCAGCAAAACGCAC+AGG | 0.499555 | 5.3:+78053905 | MS.gene38250:CDS |
| GAAGTTCACGGAGGGCTTGA+CGG | 0.504237 | 5.3:-78053587 | None:intergenic |
| TCCAAGAGAGTCAAAACCTT+GGG | 0.506085 | 5.3:-78053793 | None:intergenic |
| GCCATTCTCCTGGCAAATGA+TGG | 0.507357 | 5.3:-78053943 | None:intergenic |
| TGGCGTGCGGTACTCAAGAT+TGG | 0.507577 | 5.3:+78053861 | MS.gene38250:CDS |
| GATGAGAGCACTGGAACCAT+TGG | 0.508526 | 5.3:+78053522 | MS.gene38250:CDS |
| GTTGAATTAGCTGGAACAAA+TGG | 0.509964 | 5.3:+78053759 | MS.gene38250:CDS |
| ACCTTTGGGCTATCAGAACC+TGG | 0.510328 | 5.3:-78054125 | None:intergenic |
| GCCATCATTTGCCAGGAGAA+TGG | 0.511001 | 5.3:+78053942 | MS.gene38250:CDS |
| GGAGAGGTATTGGAGTGCAT+TGG | 0.512442 | 5.3:-78053622 | None:intergenic |
| CTGCCAAGATACCCTTGCCA+GGG | 0.516454 | 5.3:-78053497 | None:intergenic |
| TAGGCACAAGGCCATTCTCC+TGG | 0.518706 | 5.3:-78053953 | None:intergenic |
| TCGCTACGCCATCATTTGCC+AGG | 0.522141 | 5.3:+78053935 | MS.gene38250:CDS |
| GTATTGGAGTGCATTGGGAG+AGG | 0.525633 | 5.3:-78053616 | None:intergenic |
| AGGTGGACAAAGTGAAGAGC+AGG | 0.526814 | 5.3:+78054524 | MS.gene38250:CDS |
| CAATCCCCGGTACCGCGGCT+GGG | 0.528479 | 5.3:-78054491 | None:intergenic |
| TGGTGGAAGTGGAACTGGGT+TGG | 0.532441 | 5.3:+78054740 | MS.gene38250:CDS |
| AGCTAGATGTTGTGAAGCCA+TGG | 0.532979 | 5.3:+78054574 | MS.gene38250:CDS |
| GAGAGGTGAAGAGAAGTTCA+CGG | 0.536141 | 5.3:-78053599 | None:intergenic |
| CAGGTATCACCTGAGGTGAT+TGG | 0.538803 | 5.3:+78054435 | MS.gene38250:intron |
| CCACTTGGCAAACCGTGCTC+CGG | 0.542305 | 5.3:-78053841 | None:intergenic |
| GGCGATGTCATGAGATCCAT+CGG | 0.542710 | 5.3:-78053997 | None:intergenic |
| AGCAAAGCACACTCAAGACA+TGG | 0.549591 | 5.3:+78054628 | MS.gene38250:CDS |
| TGAGAAGAGTTCCTTCAAGA+AGG | 0.549810 | 5.3:-78054085 | None:intergenic |
| TACATAGCCACCCCTGGCAA+GGG | 0.556199 | 5.3:+78053486 | MS.gene38250:CDS |
| GGTAAAGAGTTTCCTCAAAG+AGG | 0.556676 | 5.3:-78053653 | None:intergenic |
| CAAGAGAACAATGTCATACC+AGG | 0.556695 | 5.3:+78053714 | MS.gene38250:CDS |
| GCTTGCTAGACGCTTGCCAA+TGG | 0.565429 | 5.3:-78053538 | None:intergenic |
| AAGCCTAACATGGTTACTCC+AGG | 0.566895 | 5.3:+78054107 | MS.gene38250:CDS |
| CTGTCCCAGCCGCGGTACCG+GGG | 0.567758 | 5.3:+78054487 | MS.gene38250:CDS |
| CTCCAAGAGAGTCAAAACCT+TGG | 0.567895 | 5.3:-78053794 | None:intergenic |
| AATGCACTCCAATACCTCTC+CGG | 0.571465 | 5.3:+78053624 | MS.gene38250:CDS |
| GTACATAGCCACCCCTGGCA+AGG | 0.572440 | 5.3:+78053485 | MS.gene38250:CDS |
| GCCAAGTACATAGCCACCCC+TGG | 0.573393 | 5.3:+78053480 | MS.gene38250:CDS |
| TGCCAGCAGTACTACAAGGC+CGG | 0.573670 | 5.3:+78053822 | MS.gene38250:CDS |
| TGTGCTTGCAGCCTGTTACA+AGG | 0.574695 | 5.3:+78054043 | MS.gene38250:CDS |
| AACAAAAGGCTTCCCATCGG+AGG | 0.574707 | 5.3:-78053682 | None:intergenic |
| AATGAGAACGAAAGTGTCCA+TGG | 0.576476 | 5.3:-78054591 | None:intergenic |
| GAATGTTGGTAAAGCTCAAG+AGG | 0.577411 | 5.3:+78054665 | MS.gene38250:CDS |
| GTGTACTCACCAATCACCTC+AGG | 0.577943 | 5.3:-78054444 | None:intergenic |
| ATGGTGGTGGAAGTGGAACT+GGG | 0.578626 | 5.3:+78054736 | MS.gene38250:CDS |
| AACTCTTCTCAAGCCTAACA+TGG | 0.582067 | 5.3:+78054097 | MS.gene38250:CDS |
| TTGGCAGCAGATGAGAGCAC+TGG | 0.583087 | 5.3:+78053513 | MS.gene38250:CDS |
| ACTCTAGGCAAATATGGTGG+TGG | 0.586057 | 5.3:+78054723 | MS.gene38250:CDS |
| GGTATTTCTGGCAAGATGCA+AGG | 0.586405 | 5.3:+78054686 | MS.gene38250:CDS |
| CAAGATACCCTTGCCAGGGG+TGG | 0.589488 | 5.3:-78053493 | None:intergenic |
| ACCAGGCATCAAAGTTGACA+AGG | 0.595336 | 5.3:+78053731 | MS.gene38250:CDS |
| CCTGACAGAAATACAATCCC+CGG | 0.595672 | 5.3:-78054504 | None:intergenic |
| CTTTACCAGAATTCCTCCGA+TGG | 0.596117 | 5.3:+78053669 | MS.gene38250:CDS |
| GGGATTGTATTTCTGTCAGG+TGG | 0.597741 | 5.3:+78054507 | MS.gene38250:CDS |
| GCCAATTCTGAAGCTACTCT+AGG | 0.598126 | 5.3:+78054708 | MS.gene38250:CDS |
| ACCTGCATACTTTCCAACAA+AGG | 0.607177 | 5.3:-78053060 | None:intergenic |
| TTTACCAGAATTCCTCCGAT+GGG | 0.613347 | 5.3:+78053670 | MS.gene38250:CDS |
| TGCTGGATAGACAACTCAGA+GGG | 0.616996 | 5.3:-78053894 | None:intergenic |
| GGTGAAGAGAAGTTCACGGA+GGG | 0.617088 | 5.3:-78053595 | None:intergenic |
| CCGGAGCACGGTTTGCCAAG+TGG | 0.620912 | 5.3:+78053841 | MS.gene38250:CDS |
| TTCAACAAAAGGCTTCCCAT+CGG | 0.623890 | 5.3:-78053685 | None:intergenic |
| TGCCAAGATACCCTTGCCAG+GGG | 0.625578 | 5.3:-78053496 | None:intergenic |
| GCTGGAAAGAAAGAGAATGT+TGG | 0.625630 | 5.3:+78054651 | MS.gene38250:CDS |
| TAGATGCCAGCAGTACTACA+AGG | 0.629007 | 5.3:+78053818 | MS.gene38250:CDS |
| ACGGTTTGCCAAGTGGCGTG+CGG | 0.639426 | 5.3:+78053848 | MS.gene38250:CDS |
| AATGGTGAAACAACAACCCA+AGG | 0.641211 | 5.3:+78053777 | MS.gene38250:CDS |
| AGTACTACAAGGCCGGAGCA+CGG | 0.644656 | 5.3:+78053829 | MS.gene38250:CDS |
| ACGCAGAACTGTCCCAGCCG+CGG | 0.649683 | 5.3:+78054479 | MS.gene38250:CDS |
| CAGGCTCAACAATAGGCACA+AGG | 0.650137 | 5.3:-78053965 | None:intergenic |
| AAATACAATCCCCGGTACCG+CGG | 0.654312 | 5.3:-78054496 | None:intergenic |
| TCTATCCAGCAAAACGCACA+GGG | 0.656184 | 5.3:+78053906 | MS.gene38250:CDS |
| GCAAAGCACACTCAAGACAT+GGG | 0.661511 | 5.3:+78054629 | MS.gene38250:CDS |
| TTGTGTGCAGGTATCACCTG+AGG | 0.664367 | 5.3:+78054428 | MS.gene38250:intron |
| TCCAGGTTCTGATAGCCCAA+AGG | 0.674535 | 5.3:+78054124 | MS.gene38250:CDS |
| TTCCTCAAAGAGGATGACAC+CGG | 0.677291 | 5.3:-78053643 | None:intergenic |
| CATCAACGTTGAGAACATTG+AGG | 0.688570 | 5.3:+78053560 | MS.gene38250:CDS |
| CAAAGAGGATGACACCGGAG+AGG | 0.703503 | 5.3:-78053638 | None:intergenic |
| CTAGCTTGTTCATTGCATCG+AGG | 0.707440 | 5.3:-78054557 | None:intergenic |
| GCTACTCTAGGCAAATATGG+TGG | 0.710878 | 5.3:+78054720 | MS.gene38250:CDS |
| CCAGGCATCAAAGTTGACAA+GGG | 0.714216 | 5.3:+78053732 | MS.gene38250:CDS |
| ACAACTCAGAGGGCTCATTG+GGG | 0.714515 | 5.3:-78053884 | None:intergenic |
| TTGCTGGATAGACAACTCAG+AGG | 0.728361 | 5.3:-78053895 | None:intergenic |
| AGGTGAAGAGAAGTTCACGG+AGG | 0.734150 | 5.3:-78053596 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAAAAAGAAATACA+AGG | - | chr5.3:78053270-78053289 | None:intergenic | 10.0% |
| !! | TTAAAACATTTATTTAAGAA+CGG | - | chr5.3:78053168-78053187 | None:intergenic | 10.0% |
| !!! | ATTATATAAACTTGTTAATG+AGG | - | chr5.3:78053418-78053437 | None:intergenic | 15.0% |
| !! | ACAAAATGTAAGAAATTAAC+GGG | + | chr5.3:78054297-78054316 | MS.gene38250:intron | 20.0% |
| !! | GACAAAATGTAAGAAATTAA+CGG | + | chr5.3:78054296-78054315 | MS.gene38250:intron | 20.0% |
| !!! | AAAAATTGAGTTTTACCTTT+GGG | - | chr5.3:78054142-78054161 | None:intergenic | 20.0% |
| !!! | TAAAAATTGAGTTTTACCTT+TGG | - | chr5.3:78054143-78054162 | None:intergenic | 20.0% |
| !!! | TATTATCTTTATTTACTCGA+GGG | + | chr5.3:78054349-78054368 | MS.gene38250:intron | 20.0% |
| !!! | TTATTATCTTTATTTACTCG+AGG | + | chr5.3:78054348-78054367 | MS.gene38250:intron | 20.0% |
| ! | AACATTTATTTAAGAACGGA+TGG | - | chr5.3:78053164-78053183 | None:intergenic | 25.0% |
| ! | AGCTTATATCAAAAGAAGAA+AGG | - | chr5.3:78053098-78053117 | None:intergenic | 25.0% |
| ! | CTTATATCAAAAGAAGAAAG+GGG | - | chr5.3:78053096-78053115 | None:intergenic | 25.0% |
| ! | GCATAATAATAGGAATTAAC+CGG | - | chr5.3:78054273-78054292 | None:intergenic | 25.0% |
| ! | GCTTATATCAAAAGAAGAAA+GGG | - | chr5.3:78053097-78053116 | None:intergenic | 25.0% |
| ! | GTTTATATAATAGTTGACTG+TGG | + | chr5.3:78053427-78053446 | MS.gene38250:intron | 25.0% |
| ! | TAATTGTTCTTGTATGTGTT+TGG | - | chr5.3:78053139-78053158 | None:intergenic | 25.0% |
| ! | TTATATCAAAAGAAGAAAGG+GGG | - | chr5.3:78053095-78053114 | None:intergenic | 25.0% |
| !! | TTCTGAGAGTTTATATGTTA+AGG | + | chr5.3:78054764-78054783 | MS.gene38250:CDS | 25.0% |
| !! | TTTTGTCGATGCATAATAAT+AGG | - | chr5.3:78054283-78054302 | None:intergenic | 25.0% |
| !!! | GTTTTTTTTCTTCATCATTC+CGG | + | chr5.3:78054251-78054270 | MS.gene38250:intron | 25.0% |
| ACATATCATGAACCATTTCT+AGG | - | chr5.3:78053371-78053390 | None:intergenic | 30.0% | |
| GTTAATGAGGATTGAAATTG+AGG | - | chr5.3:78053405-78053424 | None:intergenic | 30.0% | |
| TGAAACTAGTAACCTAGAAA+TGG | + | chr5.3:78053356-78053375 | MS.gene38250:intron | 30.0% | |
| !! | TATGCACTTCTTAATTTGTG+TGG | + | chr5.3:78053289-78053308 | MS.gene38250:intron | 30.0% |
| !! | TTCTTGTATGTGTTTGGTTT+TGG | - | chr5.3:78053133-78053152 | None:intergenic | 30.0% |
| AAAATCTCAGGCTCAACAAT+AGG | - | chr5.3:78053975-78053994 | None:intergenic | 35.0% | |
| GTTGAATTAGCTGGAACAAA+TGG | + | chr5.3:78053759-78053778 | MS.gene38250:CDS | 35.0% | |
| TCTTGGAGGATTTCAACAAA+AGG | - | chr5.3:78053699-78053718 | None:intergenic | 35.0% | |
| ! | CAATTTGCATTTTTGTGTGC+AGG | + | chr5.3:78054416-78054435 | MS.gene38250:intron | 35.0% |
| !! | TAAAGCTCAAGAGGTATTTC+TGG | + | chr5.3:78054674-78054693 | MS.gene38250:CDS | 35.0% |
| AACTCTTCTCAAGCCTAACA+TGG | + | chr5.3:78054097-78054116 | MS.gene38250:CDS | 40.0% | |
| AATGGTGAAACAACAACCCA+AGG | + | chr5.3:78053777-78053796 | MS.gene38250:CDS | 40.0% | |
| ACCTGCATACTTTCCAACAA+AGG | - | chr5.3:78053063-78053082 | None:intergenic | 40.0% | |
| ATCATTCAGTGCCTTGTAAC+AGG | - | chr5.3:78054057-78054076 | None:intergenic | 40.0% | |
| CAAGAGAACAATGTCATACC+AGG | + | chr5.3:78053714-78053733 | MS.gene38250:CDS | 40.0% | |
| CATCAACGTTGAGAACATTG+AGG | + | chr5.3:78053560-78053579 | MS.gene38250:CDS | 40.0% | |
| CTGGTATGACATTGTTCTCT+TGG | - | chr5.3:78053716-78053735 | None:intergenic | 40.0% | |
| GAAGCTACTCTAGGCAAATA+TGG | + | chr5.3:78054717-78054736 | MS.gene38250:CDS | 40.0% | |
| GCTGGAAAGAAAGAGAATGT+TGG | + | chr5.3:78054651-78054670 | MS.gene38250:CDS | 40.0% | |
| GGACACTTTCGTTCTCATTT+GGG | + | chr5.3:78054595-78054614 | MS.gene38250:CDS | 40.0% | |
| GGTAAAGAGTTTCCTCAAAG+AGG | - | chr5.3:78053656-78053675 | None:intergenic | 40.0% | |
| GTATGACATTGTTCTCTTGG+AGG | - | chr5.3:78053713-78053732 | None:intergenic | 40.0% | |
| GTGTAAGCTAGTGACAAGAT+TGG | - | chr5.3:78054181-78054200 | None:intergenic | 40.0% | |
| TCCAAGAGAGTCAAAACCTT+GGG | - | chr5.3:78053796-78053815 | None:intergenic | 40.0% | |
| TGAGAAGAGTTCCTTCAAGA+AGG | - | chr5.3:78054088-78054107 | None:intergenic | 40.0% | |
| TGGACACTTTCGTTCTCATT+TGG | + | chr5.3:78054594-78054613 | MS.gene38250:CDS | 40.0% | |
| TTCAACAAAAGGCTTCCCAT+CGG | - | chr5.3:78053688-78053707 | None:intergenic | 40.0% | |
| TTTACCAGAATTCCTCCGAT+GGG | + | chr5.3:78053670-78053689 | MS.gene38250:CDS | 40.0% | |
| ! | ACCTAGTGCGAGAGTTATTT+TGG | + | chr5.3:78053317-78053336 | MS.gene38250:intron | 40.0% |
| ! | GAATGTTGGTAAAGCTCAAG+AGG | + | chr5.3:78054665-78054684 | MS.gene38250:CDS | 40.0% |
| ! | GATCCATCGGTTAAAATCTC+AGG | - | chr5.3:78053987-78054006 | None:intergenic | 40.0% |
| !! | AAGGGTGTTGTTGAATTAGC+TGG | + | chr5.3:78053750-78053769 | MS.gene38250:CDS | 40.0% |
| !! | AATGAGAACGAAAGTGTCCA+TGG | - | chr5.3:78054594-78054613 | None:intergenic | 40.0% |
| !! | CCTAGTGCGAGAGTTATTTT+GGG | + | chr5.3:78053318-78053337 | MS.gene38250:intron | 40.0% |
| !!! | GAGAGTTATTTTGGGACAGA+GGG | + | chr5.3:78053326-78053345 | MS.gene38250:intron | 40.0% |
| AAGCCTAACATGGTTACTCC+AGG | + | chr5.3:78054107-78054126 | MS.gene38250:CDS | 45.0% | |
| AATGCACTCCAATACCTCTC+CGG | + | chr5.3:78053624-78053643 | MS.gene38250:CDS | 45.0% | |
| ACCAGGCATCAAAGTTGACA+AGG | + | chr5.3:78053731-78053750 | MS.gene38250:CDS | 45.0% | |
| ACTCTAGGCAAATATGGTGG+TGG | + | chr5.3:78054723-78054742 | MS.gene38250:CDS | 45.0% | |
| AGCAAAGCACACTCAAGACA+TGG | + | chr5.3:78054628-78054647 | MS.gene38250:CDS | 45.0% | |
| AGCTAGATGTTGTGAAGCCA+TGG | + | chr5.3:78054574-78054593 | MS.gene38250:CDS | 45.0% | |
| CCAGGCATCAAAGTTGACAA+GGG | + | chr5.3:78053732-78053751 | MS.gene38250:CDS | 45.0% | |
| CCCAAAATAACTCTCGCACT+AGG | - | chr5.3:78053321-78053340 | None:intergenic | 45.0% | |
| CCTGACAGAAATACAATCCC+CGG | - | chr5.3:78054507-78054526 | None:intergenic | 45.0% | |
| CTCCAAGAGAGTCAAAACCT+TGG | - | chr5.3:78053797-78053816 | None:intergenic | 45.0% | |
| CTTTACCAGAATTCCTCCGA+TGG | + | chr5.3:78053669-78053688 | MS.gene38250:CDS | 45.0% | |
| GAACCTGGAGTAACCATGTT+AGG | - | chr5.3:78054113-78054132 | None:intergenic | 45.0% | |
| GAGAGGTGAAGAGAAGTTCA+CGG | - | chr5.3:78053602-78053621 | None:intergenic | 45.0% | |
| GATCAGCATGTCCTTCTTGA+AGG | + | chr5.3:78054074-78054093 | MS.gene38250:CDS | 45.0% | |
| GCAAAGCACACTCAAGACAT+GGG | + | chr5.3:78054629-78054648 | MS.gene38250:CDS | 45.0% | |
| GCCTAGAGTAGCTTCAGAAT+TGG | - | chr5.3:78054712-78054731 | None:intergenic | 45.0% | |
| GCTACTCTAGGCAAATATGG+TGG | + | chr5.3:78054720-78054739 | MS.gene38250:CDS | 45.0% | |
| TAGATGCCAGCAGTACTACA+AGG | + | chr5.3:78053818-78053837 | MS.gene38250:CDS | 45.0% | |
| TCTATCCAGCAAAACGCACA+GGG | + | chr5.3:78053906-78053925 | MS.gene38250:CDS | 45.0% | |
| TGCTGGATAGACAACTCAGA+GGG | - | chr5.3:78053897-78053916 | None:intergenic | 45.0% | |
| TTCCTCAAAGAGGATGACAC+CGG | - | chr5.3:78053646-78053665 | None:intergenic | 45.0% | |
| TTGCTGGATAGACAACTCAG+AGG | - | chr5.3:78053898-78053917 | None:intergenic | 45.0% | |
| ! | GCCTTTGTTGGAAAGTATGC+AGG | + | chr5.3:78053059-78053078 | MS.gene38250:CDS | 45.0% |
| ! | GGGATTGTATTTCTGTCAGG+TGG | + | chr5.3:78054507-78054526 | MS.gene38250:CDS | 45.0% |
| !! | CTAGCTTGTTCATTGCATCG+AGG | - | chr5.3:78054560-78054579 | None:intergenic | 45.0% |
| !! | GAGAGGTATTGGAGTGCATT+GGG | - | chr5.3:78053624-78053643 | None:intergenic | 45.0% |
| !! | GAGCCTGAGATTTTAACCGA+TGG | + | chr5.3:78053981-78054000 | MS.gene38250:CDS | 45.0% |
| !! | GCCAATTCTGAAGCTACTCT+AGG | + | chr5.3:78054708-78054727 | MS.gene38250:CDS | 45.0% |
| !! | GGTATTTCTGGCAAGATGCA+AGG | + | chr5.3:78054686-78054705 | MS.gene38250:CDS | 45.0% |
| !!! | ACCCAAGGTTTTGACTCTCT+TGG | + | chr5.3:78053792-78053811 | MS.gene38250:CDS | 45.0% |
| !!! | CGAGAGTTATTTTGGGACAG+AGG | + | chr5.3:78053325-78053344 | MS.gene38250:intron | 45.0% |
| AAATACAATCCCCGGTACCG+CGG | - | chr5.3:78054499-78054518 | None:intergenic | 50.0% | |
| AACAAAAGGCTTCCCATCGG+AGG | - | chr5.3:78053685-78053704 | None:intergenic | 50.0% | |
| ACAACTCAGAGGGCTCATTG+GGG | - | chr5.3:78053887-78053906 | None:intergenic | 50.0% | |
| ACCTTTGGGCTATCAGAACC+TGG | - | chr5.3:78054128-78054147 | None:intergenic | 50.0% | |
| AGACAACTCAGAGGGCTCAT+TGG | - | chr5.3:78053889-78053908 | None:intergenic | 50.0% | |
| AGGTGAAGAGAAGTTCACGG+AGG | - | chr5.3:78053599-78053618 | None:intergenic | 50.0% | |
| AGGTGGACAAAGTGAAGAGC+AGG | + | chr5.3:78054524-78054543 | MS.gene38250:CDS | 50.0% | |
| CAGGCTCAACAATAGGCACA+AGG | - | chr5.3:78053968-78053987 | None:intergenic | 50.0% | |
| CAGGTATCACCTGAGGTGAT+TGG | + | chr5.3:78054435-78054454 | MS.gene38250:intron | 50.0% | |
| CCCTTGTCAACTTTGATGCC+TGG | - | chr5.3:78053735-78053754 | None:intergenic | 50.0% | |
| GACAACTCAGAGGGCTCATT+GGG | - | chr5.3:78053888-78053907 | None:intergenic | 50.0% | |
| GCCATCATTTGCCAGGAGAA+TGG | + | chr5.3:78053942-78053961 | MS.gene38250:CDS | 50.0% | |
| GCCATTCTCCTGGCAAATGA+TGG | - | chr5.3:78053946-78053965 | None:intergenic | 50.0% | |
| GGCGATGTCATGAGATCCAT+CGG | - | chr5.3:78054000-78054019 | None:intergenic | 50.0% | |
| GGTGAAGAGAAGTTCACGGA+GGG | - | chr5.3:78053598-78053617 | None:intergenic | 50.0% | |
| GTATTGGAGTGCATTGGGAG+AGG | - | chr5.3:78053619-78053638 | None:intergenic | 50.0% | |
| GTCTATCCAGCAAAACGCAC+AGG | + | chr5.3:78053905-78053924 | MS.gene38250:CDS | 50.0% | |
| GTGTACTCACCAATCACCTC+AGG | - | chr5.3:78054447-78054466 | None:intergenic | 50.0% | |
| TCGAGGGACAAAGTCAGAGA+GGG | + | chr5.3:78054365-78054384 | MS.gene38250:intron | 50.0% | |
| TGTGCTTGCAGCCTGTTACA+AGG | + | chr5.3:78054043-78054062 | MS.gene38250:CDS | 50.0% | |
| TTCAGTGACAGCAGCGCATT+TGG | - | chr5.3:78054021-78054040 | None:intergenic | 50.0% | |
| TTGTGTGCAGGTATCACCTG+AGG | + | chr5.3:78054428-78054447 | MS.gene38250:intron | 50.0% | |
| ! | CCGGGGATTGTATTTCTGTC+AGG | + | chr5.3:78054504-78054523 | MS.gene38250:CDS | 50.0% |
| ! | TCCAGGTTCTGATAGCCCAA+AGG | + | chr5.3:78054124-78054143 | MS.gene38250:CDS | 50.0% |
| !! | ATGGTGGTGGAAGTGGAACT+GGG | + | chr5.3:78054736-78054755 | MS.gene38250:CDS | 50.0% |
| !! | GATGAGAGCACTGGAACCAT+TGG | + | chr5.3:78053522-78053541 | MS.gene38250:CDS | 50.0% |
| !! | GGAGAGGTATTGGAGTGCAT+TGG | - | chr5.3:78053625-78053644 | None:intergenic | 50.0% |
| !! | GGCAAATATGGTGGTGGAAG+TGG | + | chr5.3:78054729-78054748 | MS.gene38250:CDS | 50.0% |
| !! | TATGGTGGTGGAAGTGGAAC+TGG | + | chr5.3:78054735-78054754 | MS.gene38250:CDS | 50.0% |
| AGCACACTCAAGACATGGGC+TGG | + | chr5.3:78054633-78054652 | MS.gene38250:CDS | 55.0% | |
| AGTACTACAAGGCCGGAGCA+CGG | + | chr5.3:78053829-78053848 | MS.gene38250:CDS | 55.0% | |
| CAAAGAGGATGACACCGGAG+AGG | - | chr5.3:78053641-78053660 | None:intergenic | 55.0% | |
| CTCGAGGGACAAAGTCAGAG+AGG | + | chr5.3:78054364-78054383 | MS.gene38250:intron | 55.0% | |
| CTGCCAAGATACCCTTGCCA+GGG | - | chr5.3:78053500-78053519 | None:intergenic | 55.0% | |
| GAAGTTCACGGAGGGCTTGA+CGG | - | chr5.3:78053590-78053609 | None:intergenic | 55.0% | |
| GCTTCCCATCGGAGGAATTC+TGG | - | chr5.3:78053677-78053696 | None:intergenic | 55.0% | |
| TACATAGCCACCCCTGGCAA+GGG | + | chr5.3:78053486-78053505 | MS.gene38250:CDS | 55.0% | |
| TAGGCACAAGGCCATTCTCC+TGG | - | chr5.3:78053956-78053975 | None:intergenic | 55.0% | |
| TCGCTACGCCATCATTTGCC+AGG | + | chr5.3:78053935-78053954 | MS.gene38250:CDS | 55.0% | |
| TGCCAAGATACCCTTGCCAG+GGG | - | chr5.3:78053499-78053518 | None:intergenic | 55.0% | |
| TGCCAGCAGTACTACAAGGC+CGG | + | chr5.3:78053822-78053841 | MS.gene38250:CDS | 55.0% | |
| TGGCGTGCGGTACTCAAGAT+TGG | + | chr5.3:78053861-78053880 | MS.gene38250:CDS | 55.0% | |
| TGGTGGAAGTGGAACTGGGT+TGG | + | chr5.3:78054740-78054759 | MS.gene38250:CDS | 55.0% | |
| ! | GCTTGCTAGACGCTTGCCAA+TGG | - | chr5.3:78053541-78053560 | None:intergenic | 55.0% |
| ! | GGATGACACCGGAGAGGTAT+TGG | - | chr5.3:78053635-78053654 | None:intergenic | 55.0% |
| ! | TTGGCAGCAGATGAGAGCAC+TGG | + | chr5.3:78053513-78053532 | MS.gene38250:CDS | 55.0% |
| !! | CTCCGGTGTCATCCTCTTTG+AGG | + | chr5.3:78053641-78053660 | MS.gene38250:CDS | 55.0% |
| ACGGTTTGCCAAGTGGCGTG+CGG | + | chr5.3:78053848-78053867 | MS.gene38250:CDS | 60.0% | |
| CAAGATACCCTTGCCAGGGG+TGG | - | chr5.3:78053496-78053515 | None:intergenic | 60.0% | |
| CCACTTGGCAAACCGTGCTC+CGG | - | chr5.3:78053844-78053863 | None:intergenic | 60.0% | |
| CCAGCAAAACGCACAGGGCT+TGG | + | chr5.3:78053911-78053930 | MS.gene38250:CDS | 60.0% | |
| GCCAAGTACATAGCCACCCC+TGG | + | chr5.3:78053480-78053499 | MS.gene38250:CDS | 60.0% | |
| GCCAGGGGTGGCTATGTACT+TGG | - | chr5.3:78053484-78053503 | None:intergenic | 60.0% | |
| GCTGCCAAGATACCCTTGCC+AGG | - | chr5.3:78053501-78053520 | None:intergenic | 60.0% | |
| GTACATAGCCACCCCTGGCA+AGG | + | chr5.3:78053485-78053504 | MS.gene38250:CDS | 60.0% | |
| TTCACGGAGGGCTTGACGGT+TGG | - | chr5.3:78053586-78053605 | None:intergenic | 60.0% | |
| ! | CCAAGCCCTGTGCGTTTTGC+TGG | - | chr5.3:78053914-78053933 | None:intergenic | 60.0% |
| ! | CTCCGGCCTTGTAGTACTGC+TGG | - | chr5.3:78053827-78053846 | None:intergenic | 60.0% |
| ! | CTTGAGTACCGCACGCCACT+TGG | - | chr5.3:78053859-78053878 | None:intergenic | 60.0% |
| !! | CACCCCTGGCAAGGGTATCT+TGG | + | chr5.3:78053494-78053513 | MS.gene38250:CDS | 60.0% |
| AACTGTCCCAGCCGCGGTAC+CGG | + | chr5.3:78054485-78054504 | MS.gene38250:CDS | 65.0% | |
| ACGCAGAACTGTCCCAGCCG+CGG | + | chr5.3:78054479-78054498 | MS.gene38250:CDS | 65.0% | |
| CCGGAGCACGGTTTGCCAAG+TGG | + | chr5.3:78053841-78053860 | MS.gene38250:CDS | 65.0% | |
| ACAATCCCCGGTACCGCGGC+TGG | - | chr5.3:78054495-78054514 | None:intergenic | 70.0% | |
| ACTGTCCCAGCCGCGGTACC+GGG | + | chr5.3:78054486-78054505 | MS.gene38250:CDS | 70.0% | |
| CAATCCCCGGTACCGCGGCT+GGG | - | chr5.3:78054494-78054513 | None:intergenic | 70.0% | |
| CTGTCCCAGCCGCGGTACCG+GGG | + | chr5.3:78054487-78054506 | MS.gene38250:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 78053053 | 78054800 | 78053053 | ID=MS.gene38250 |
| chr5.3 | mRNA | 78053053 | 78054800 | 78053053 | ID=MS.gene38250.t1;Parent=MS.gene38250 |
| chr5.3 | exon | 78053053 | 78053080 | 78053053 | ID=MS.gene38250.t1.exon1;Parent=MS.gene38250.t1 |
| chr5.3 | CDS | 78053053 | 78053080 | 78053053 | ID=cds.MS.gene38250.t1;Parent=MS.gene38250.t1 |
| chr5.3 | exon | 78053463 | 78054145 | 78053463 | ID=MS.gene38250.t1.exon2;Parent=MS.gene38250.t1 |
| chr5.3 | CDS | 78053463 | 78054145 | 78053463 | ID=cds.MS.gene38250.t1;Parent=MS.gene38250.t1 |
| chr5.3 | exon | 78054438 | 78054800 | 78054438 | ID=MS.gene38250.t1.exon3;Parent=MS.gene38250.t1 |
| chr5.3 | CDS | 78054438 | 78054800 | 78054438 | ID=cds.MS.gene38250.t1;Parent=MS.gene38250.t1 |
| Gene Sequence |
| Protein sequence |
