Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006556.t1 | XP_013456629.1 | 98.5 | 342 | 5 | 0 | 1 | 342 | 1 | 342 | 8.00E-171 | 609.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006556.t1 | Q9FNY2 | 67.5 | 289 | 60 | 5 | 87 | 342 | 98 | 385 | 6.1e-95 | 349.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006556.t1 | A0A072UXQ9 | 98.5 | 342 | 5 | 0 | 1 | 342 | 1 | 342 | 5.7e-171 | 609.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene006556.t1 | TF | E2F-DP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene94315 | MS.gene006556 | PPI |
| MS.gene006556 | MS.gene81646 | PPI |
| MS.gene09552 | MS.gene006556 | PPI |
| MS.gene20253 | MS.gene006556 | PPI |
| MS.gene064876 | MS.gene006556 | PPI |
| MS.gene57177 | MS.gene006556 | PPI |
| MS.gene57178 | MS.gene006556 | PPI |
| MS.gene006556 | MS.gene069975 | PPI |
| MS.gene041917 | MS.gene006556 | PPI |
| MS.gene011754 | MS.gene006556 | PPI |
| MS.gene99648 | MS.gene006556 | PPI |
| MS.gene09551 | MS.gene006556 | PPI |
| MS.gene006556 | MS.gene20252 | PPI |
| MS.gene006556 | MS.gene024895 | PPI |
| MS.gene92318 | MS.gene006556 | PPI |
| MS.gene94307 | MS.gene006556 | PPI |
| MS.gene98552 | MS.gene006556 | PPI |
| MS.gene014301 | MS.gene006556 | PPI |
| MS.gene000128 | MS.gene006556 | PPI |
| MS.gene006556 | MS.gene015213 | PPI |
| MS.gene006556 | MS.gene91416 | PPI |
| MS.gene006556 | MS.gene80094 | PPI |
| MS.gene070538 | MS.gene006556 | PPI |
| MS.gene006556 | MS.gene44510 | PPI |
| MS.gene66836 | MS.gene006556 | PPI |
| MS.gene016712 | MS.gene006556 | PPI |
| MS.gene006556 | MS.gene015212 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006556.t1 | MTR_4g077797 | 98.830 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 0.0 | 699 |
| MS.gene006556.t1 | MTR_4g077803 | 84.393 | 346 | 48 | 3 | 1 | 342 | 1 | 344 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006556.t1 | AT5G03415 | 64.067 | 359 | 91 | 8 | 21 | 342 | 28 | 385 | 8.14e-148 | 422 |
| MS.gene006556.t1 | AT5G03415 | 62.117 | 359 | 92 | 9 | 21 | 342 | 28 | 379 | 1.06e-139 | 401 |
| MS.gene006556.t1 | AT5G02470 | 51.376 | 218 | 97 | 3 | 63 | 279 | 32 | 241 | 1.28e-75 | 235 |
| MS.gene006556.t1 | AT5G02470 | 51.376 | 218 | 97 | 3 | 63 | 279 | 32 | 241 | 1.28e-75 | 235 |
| MS.gene006556.t1 | AT5G02470 | 51.376 | 218 | 97 | 3 | 63 | 279 | 32 | 241 | 1.28e-75 | 235 |
Find 89 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTCAAGGCAATGGATTT+TGG | 0.207282 | 4.4:-32772147 | MS.gene006556:CDS |
| TCCACTCCCTGGAATATTAA+AGG | 0.271571 | 4.4:-32771986 | MS.gene006556:CDS |
| GGTTGTGGAACTACGCTTTC+CGG | 0.284948 | 4.4:-32775782 | MS.gene006556:CDS |
| TATTATTGCTACAAGTTTGT+AGG | 0.286595 | 4.4:-32773138 | MS.gene006556:intron |
| ATTGTTCATTTCGTTGAATA+AGG | 0.299922 | 4.4:+32773106 | None:intergenic |
| TATACCTGAACCAGAATAAA+AGG | 0.312486 | 4.4:+32773042 | None:intergenic |
| ACTCTTGCCTTTAATATTCC+AGG | 0.333887 | 4.4:+32771979 | None:intergenic |
| TGATGCTCTGAATGTTCTTA+TGG | 0.333958 | 4.4:-32773557 | MS.gene006556:CDS |
| AACCTTTCATACTAAATTGC+CGG | 0.339281 | 4.4:+32774782 | None:intergenic |
| TGGTGGTTTGTCCCCTGATC+AGG | 0.346346 | 4.4:-32773723 | MS.gene006556:intron |
| CAGTTTCAAACATGTTAGTT+AGG | 0.354238 | 4.4:-32772023 | MS.gene006556:CDS |
| TCCTGCTGGTTGAGCCTGAT+TGG | 0.355296 | 4.4:+32775759 | None:intergenic |
| GAAGATAAGAAAACCTGATC+AGG | 0.380867 | 4.4:+32773710 | None:intergenic |
| CGAAGAGGACGAGGAATTGA+TGG | 0.402627 | 4.4:-32775804 | MS.gene006556:CDS |
| ACTACGCTTTCCGGCCAATC+AGG | 0.405110 | 4.4:-32775773 | MS.gene006556:CDS |
| GGCTCAACCAGCAGGAGTGC+CGG | 0.417822 | 4.4:-32775752 | MS.gene006556:CDS |
| TTAAATAGACACAGCGTCTT+GGG | 0.420475 | 4.4:-32773356 | MS.gene006556:intron |
| GCCTTTAATATTCCAGGGAG+TGG | 0.432840 | 4.4:+32771985 | None:intergenic |
| AGACACAGCGTCTTGGGCTT+AGG | 0.448668 | 4.4:-32773350 | MS.gene006556:CDS |
| TCCTCATGCAACTGTGGAAG+TGG | 0.457569 | 4.4:-32772516 | MS.gene006556:CDS |
| ATTAAATAGACACAGCGTCT+TGG | 0.463317 | 4.4:-32773357 | MS.gene006556:intron |
| GGGGAAGGTTCTAGCATGTC+AGG | 0.468504 | 4.4:-32772072 | MS.gene006556:CDS |
| AGACTCACGCAACTACTGCC+TGG | 0.468595 | 4.4:+32775627 | None:intergenic |
| GCCAATCAGGCTCAACCAGC+AGG | 0.469228 | 4.4:-32775760 | MS.gene006556:CDS |
| GACGAGGAATTGATGGGTTG+TGG | 0.469944 | 4.4:-32775797 | MS.gene006556:CDS |
| GGCTATGAATATTATTTCCA+AGG | 0.477616 | 4.4:-32773536 | MS.gene006556:CDS |
| AGGTAAAGATACACCTCCAC+TGG | 0.479385 | 4.4:+32773062 | None:intergenic |
| CTGCTCAAGCTCCTGCAGAT+AGG | 0.480130 | 4.4:+32773305 | None:intergenic |
| GCTCAACCAGCAGGAGTGCC+GGG | 0.480925 | 4.4:-32775751 | MS.gene006556:CDS |
| GAGTGATATTGAAGAACTAA+AGG | 0.483152 | 4.4:-32773470 | MS.gene006556:intron |
| CTCCGGCAATTTAGTATGAA+AGG | 0.485877 | 4.4:-32774784 | MS.gene006556:intron |
| CGGTAACCCGGCACTCCTGC+TGG | 0.489023 | 4.4:+32775745 | None:intergenic |
| GCTGGTTGAGCCTGATTGGC+CGG | 0.493558 | 4.4:+32775763 | None:intergenic |
| AATGAACAATTATATAGCTC+AGG | 0.501710 | 4.4:-32773093 | MS.gene006556:CDS |
| AGCCGGAGTGAGCAGACCAC+GGG | 0.509849 | 4.4:-32775719 | MS.gene006556:CDS |
| GGGGACAAACCACCATTGCT+TGG | 0.511216 | 4.4:+32773731 | None:intergenic |
| GACTCACGCAACTACTGCCT+GGG | 0.512394 | 4.4:+32775628 | None:intergenic |
| ATAAGAATGGAAGAGGGCTC+CGG | 0.512718 | 4.4:-32774801 | MS.gene006556:CDS |
| GTCCGTGGACGAAGAGGACG+AGG | 0.514783 | 4.4:-32775813 | MS.gene006556:CDS |
| CTCTTGCCTTTAATATTCCA+GGG | 0.515553 | 4.4:+32771980 | None:intergenic |
| TGTGAGAAGGTAGAAAGTAA+AGG | 0.516897 | 4.4:-32774272 | MS.gene006556:CDS |
| TGATGACGATGCTGCTTCCC+AGG | 0.519370 | 4.4:-32775645 | MS.gene006556:CDS |
| CAATTATGTTCTCAAGGCAA+TGG | 0.525211 | 4.4:-32772154 | MS.gene006556:CDS |
| CCGACATCACCTCCACTCCC+TGG | 0.527073 | 4.4:-32771997 | MS.gene006556:CDS |
| TTCCTCGTCCTCTTCGTCCA+CGG | 0.529381 | 4.4:+32775811 | None:intergenic |
| GTCAGGCATGTATCAATCAC+AGG | 0.555543 | 4.4:-32772055 | MS.gene006556:CDS |
| TTGTCGTCATGCAGCTCGAA+AGG | 0.559999 | 4.4:+32772174 | None:intergenic |
| AAGATAAGAAAACCTGATCA+GGG | 0.563158 | 4.4:+32773711 | None:intergenic |
| CACACAATATTGCGGATGGA+GGG | 0.564114 | 4.4:-32772092 | MS.gene006556:CDS |
| GGCTTAGGAGTAGAATTGAA+AGG | 0.565800 | 4.4:-32773335 | MS.gene006556:CDS |
| TTTAATATTCCAGGGAGTGG+AGG | 0.566833 | 4.4:+32771988 | None:intergenic |
| GTCTGCTCACTCCGGCTAGA+CGG | 0.569869 | 4.4:+32775725 | None:intergenic |
| TTTGAGAGCAGCGTTATCAC+CGG | 0.570401 | 4.4:+32775688 | None:intergenic |
| CAGACCACGGGGACAGCCGC+CGG | 0.573222 | 4.4:-32775707 | MS.gene006556:CDS |
| GTGCCGGGTTACCGTCTAGC+CGG | 0.573556 | 4.4:-32775736 | MS.gene006556:CDS |
| AAGGAAAGCAGCCTATCTGC+AGG | 0.574961 | 4.4:-32773316 | MS.gene006556:CDS |
| AATATTGCGGATGGAGGGGA+AGG | 0.575401 | 4.4:-32772087 | MS.gene006556:CDS |
| TTCTTCAATATCACTCAGAC+TGG | 0.575701 | 4.4:+32773477 | None:intergenic |
| CCAGGGAGTGGAGGTGATGT+CGG | 0.580031 | 4.4:+32771997 | None:intergenic |
| ACACAATATTGCGGATGGAG+GGG | 0.585147 | 4.4:-32772091 | MS.gene006556:CDS |
| TCCCCGTGGTCTGCTCACTC+CGG | 0.599110 | 4.4:+32775717 | None:intergenic |
| ACACACAATATTGCGGATGG+AGG | 0.602906 | 4.4:-32772093 | MS.gene006556:CDS |
| GAAGAGGACGAGGAATTGAT+GGG | 0.603441 | 4.4:-32775803 | MS.gene006556:CDS |
| TGACGACAATTATGTTCTCA+AGG | 0.607641 | 4.4:-32772160 | MS.gene006556:CDS |
| TCCACTTCCACAGTTGCATG+AGG | 0.608745 | 4.4:+32772515 | None:intergenic |
| GTTACACACAATATTGCGGA+TGG | 0.615879 | 4.4:-32772096 | MS.gene006556:CDS |
| GGGAGTGGAGGTGATGTCGG+AGG | 0.628434 | 4.4:+32772000 | None:intergenic |
| TCAATCGTCCGTGGACGAAG+AGG | 0.631369 | 4.4:-32775819 | MS.gene006556:CDS |
| CAATGTTACACACAATATTG+CGG | 0.641067 | 4.4:-32772100 | MS.gene006556:CDS |
| TCAGGAAATCCTCCCAGTGG+AGG | 0.644133 | 4.4:-32773075 | MS.gene006556:CDS |
| GACACGTCCTCATGCAACTG+TGG | 0.649899 | 4.4:-32772522 | MS.gene006556:CDS |
| TAGCCGGAGTGAGCAGACCA+CGG | 0.651050 | 4.4:-32775720 | MS.gene006556:CDS |
| TGTGTAACATTGTCACTCTG+TGG | 0.651492 | 4.4:+32772111 | None:intergenic |
| ATCACCGGCGGCTGTCCCCG+TGG | 0.656058 | 4.4:+32775703 | None:intergenic |
| ACTCCGGCTAGACGGTAACC+CGG | 0.657214 | 4.4:+32775733 | None:intergenic |
| AGGAAGAACAACTTACAATG+AGG | 0.663086 | 4.4:-32774252 | MS.gene006556:intron |
| GAGCATCATAGACCCTTCGA+CGG | 0.678223 | 4.4:+32773572 | None:intergenic |
| GGTAAAGATACACCTCCACT+GGG | 0.679973 | 4.4:+32773063 | None:intergenic |
| AGCTCAGGAAATCCTCCCAG+TGG | 0.682103 | 4.4:-32773078 | MS.gene006556:CDS |
| GCAGCCGCATCAATCGTCCG+TGG | 0.683605 | 4.4:-32775828 | MS.gene006556:CDS |
| AGATAAGAAAACCTGATCAG+GGG | 0.686331 | 4.4:+32773712 | None:intergenic |
| ATAGGTGGCAGATGAACTTG+TGG | 0.689893 | 4.4:-32773768 | MS.gene006556:intron |
| AACATGTTTGAAACTGACTG+AGG | 0.695881 | 4.4:+32772030 | None:intergenic |
| TCGTCCACGGACGATTGATG+CGG | 0.696336 | 4.4:+32775824 | None:intergenic |
| GAGAGCAGCGTTATCACCGG+CGG | 0.697043 | 4.4:+32775691 | None:intergenic |
| GGGGTGATAAGAATGGAAGA+GGG | 0.716134 | 4.4:-32774807 | MS.gene006556:CDS |
| AAAGATACACCTCCACTGGG+AGG | 0.724160 | 4.4:+32773066 | None:intergenic |
| ATATCACTCAGACTGGTACG+AGG | 0.734989 | 4.4:+32773484 | None:intergenic |
| GCCGGAGTGAGCAGACCACG+GGG | 0.739516 | 4.4:-32775718 | MS.gene006556:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAATTTTTTTTTT+AGG | + | chr4.4:32774015-32773996 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTAAATAT+AGG | - | chr4.4:32774013-32774032 | MS.gene006556:intron | 0.0% |
| !! | AAGTATAGATATAAATAAAA+AGG | + | chr4.4:32772851-32772870 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTTTAGGAAATA+AGG | + | chr4.4:32773988-32774007 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAATATAGG+TGG | - | chr4.4:32774016-32774035 | MS.gene006556:intron | 10.0% |
| !! | AAATTAATTAGTGGTTAATT+TGG | - | chr4.4:32772708-32772727 | MS.gene006556:intron | 15.0% |
| !! | CTATTTAAAAAACTAATTGA+AGG | + | chr4.4:32773798-32773817 | None:intergenic | 15.0% |
| !! | TTATTTATATCTATACTTTG+TGG | - | chr4.4:32772853-32772872 | MS.gene006556:intron | 15.0% |
| !!! | AAATAATTTTCCCTTTTTTT+GGG | - | chr4.4:32774996-32775015 | MS.gene006556:intron | 15.0% |
| !!! | ATCTTATGAACTTATTTTTT+TGG | - | chr4.4:32774162-32774181 | MS.gene006556:intron | 15.0% |
| !!! | CTTCAATTAGTTTTTTAAAT+AGG | - | chr4.4:32773796-32773815 | MS.gene006556:intron | 15.0% |
| !!! | TCTTATGAACTTATTTTTTT+GGG | - | chr4.4:32774163-32774182 | MS.gene006556:intron | 15.0% |
| !! | AAAAAAGAAATACAATGGAA+GGG | - | chr4.4:32774288-32774307 | MS.gene006556:intron | 20.0% |
| !! | AATTAACCACTAATTAATTC+AGG | + | chr4.4:32772607-32772626 | None:intergenic | 20.0% |
| !! | AATTTAAAAAATAGCAATCC+AGG | + | chr4.4:32774566-32774585 | None:intergenic | 20.0% |
| !! | AGGATAAAAAAGAAATACAA+TGG | - | chr4.4:32774283-32774302 | MS.gene006556:intron | 20.0% |
| !! | ATGTAATATATTATCATCCA+AGG | + | chr4.4:32774846-32774865 | None:intergenic | 20.0% |
| !! | GAATTAATTAGTGGTTAATT+TGG | - | chr4.4:32772607-32772626 | MS.gene006556:intron | 20.0% |
| !! | TAAAAAAGAAATACAATGGA+AGG | - | chr4.4:32774287-32774306 | MS.gene006556:intron | 20.0% |
| !! | TAAAAAGTTAAAGATCAAAG+TGG | + | chr4.4:32773062-32773081 | None:intergenic | 20.0% |
| !! | TAAGAATCAATCGAAAATAA+TGG | + | chr4.4:32772923-32772942 | None:intergenic | 20.0% |
| !! | TATAAATCCAATTTCATGTT+TGG | - | chr4.4:32772260-32772279 | MS.gene006556:intron | 20.0% |
| !! | TTAAAACCTGAATTAATTAG+TGG | - | chr4.4:32772598-32772617 | MS.gene006556:intron | 20.0% |
| !! | TTCATTGCAAAATTAATTAG+TGG | - | chr4.4:32772699-32772718 | MS.gene006556:intron | 20.0% |
| !! | TTCTATAAATACATACATGT+TGG | - | chr4.4:32773720-32773739 | MS.gene006556:intron | 20.0% |
| !! | TTTATTCAAGGTCTAAAAAA+TGG | - | chr4.4:32772442-32772461 | MS.gene006556:intron | 20.0% |
| !!! | AAAAAACTGGTTTAAAGTAA+AGG | + | chr4.4:32773578-32773597 | None:intergenic | 20.0% |
| !!! | AAGATTTTCAATTAGTGAAA+AGG | - | chr4.4:32772367-32772386 | MS.gene006556:intron | 20.0% |
| !!! | CTTATGAACTTATTTTTTTG+GGG | - | chr4.4:32774164-32774183 | MS.gene006556:intron | 20.0% |
| !!! | GAAATAATTTTCCCTTTTTT+TGG | - | chr4.4:32774995-32775014 | MS.gene006556:intron | 20.0% |
| !!! | TATTTGCTATTTACACATTA+AGG | - | chr4.4:32774129-32774148 | MS.gene006556:intron | 20.0% |
| !!! | TTGTATTTCTTTTTTATCCT+TGG | + | chr4.4:32774283-32774302 | None:intergenic | 20.0% |
| !!! | TTGTTCATTTTGATTTCAAT+AGG | - | chr4.4:32775327-32775346 | MS.gene006556:intron | 20.0% |
| ! | AAAATCAACAGTAATTAGAG+AGG | + | chr4.4:32773499-32773518 | None:intergenic | 25.0% |
| ! | AAATCAACAGTAATTAGAGA+GGG | + | chr4.4:32773498-32773517 | None:intergenic | 25.0% |
| ! | AATAAAAACAGAGAATTGAC+AGG | + | chr4.4:32772889-32772908 | None:intergenic | 25.0% |
| ! | AATGAACAATTATATAGCTC+AGG | - | chr4.4:32774706-32774725 | MS.gene006556:intron | 25.0% |
| ! | AATTGAACAACAATTTCTAC+TGG | + | chr4.4:32774820-32774839 | None:intergenic | 25.0% |
| ! | AGAGAGTAAACATAAATAAG+TGG | + | chr4.4:32775595-32775614 | None:intergenic | 25.0% |
| ! | ATAACATAGACCCATAAAAT+AGG | + | chr4.4:32775113-32775132 | None:intergenic | 25.0% |
| ! | ATATTGAAGAACTAAAGGTT+TGG | - | chr4.4:32774334-32774353 | MS.gene006556:intron | 25.0% |
| ! | ATTACATGAACTTAAGTAGT+TGG | - | chr4.4:32774890-32774909 | MS.gene006556:intron | 25.0% |
| ! | ATTGTTCATTTCGTTGAATA+AGG | + | chr4.4:32774696-32774715 | None:intergenic | 25.0% |
| ! | CTTTATGATACCACAAAATT+AGG | + | chr4.4:32775438-32775457 | None:intergenic | 25.0% |
| ! | GATAAATCACAACATGAAAT+GGG | + | chr4.4:32773921-32773940 | None:intergenic | 25.0% |
| ! | GGTATTAAATCAATTAGAGT+GGG | + | chr4.4:32774533-32774552 | None:intergenic | 25.0% |
| ! | GTAGAGAAAATTGTCAAAAA+TGG | + | chr4.4:32773459-32773478 | None:intergenic | 25.0% |
| ! | TAAACATTTGTGTAAAGGTT+TGG | - | chr4.4:32773153-32773172 | MS.gene006556:intron | 25.0% |
| ! | TAGTATATAGCAGTAACTTT+CGG | + | chr4.4:32775043-32775062 | None:intergenic | 25.0% |
| ! | TATTATTGCTACAAGTTTGT+AGG | - | chr4.4:32774661-32774680 | MS.gene006556:intron | 25.0% |
| ! | TGAAAAGGAAAATGATATAC+TGG | - | chr4.4:32772382-32772401 | MS.gene006556:intron | 25.0% |
| ! | TGACATAAACATTTGTGTAA+AGG | - | chr4.4:32773148-32773167 | MS.gene006556:intron | 25.0% |
| ! | TGATAAATCACAACATGAAA+TGG | + | chr4.4:32773922-32773941 | None:intergenic | 25.0% |
| !! | ATTTTATGGGTCTATGTTAT+GGG | - | chr4.4:32775113-32775132 | MS.gene006556:intron | 25.0% |
| !! | CAAATAAGTTGTTTCAAACA+AGG | + | chr4.4:32773122-32773141 | None:intergenic | 25.0% |
| !! | CACTCTAATTGATTTAATAC+CGG | - | chr4.4:32774532-32774551 | MS.gene006556:intron | 25.0% |
| !! | TATTTTATGGGTCTATGTTA+TGG | - | chr4.4:32775112-32775131 | MS.gene006556:intron | 25.0% |
| !! | TGTATCTTTACCTTTTATTC+TGG | - | chr4.4:32774747-32774766 | MS.gene006556:intron | 25.0% |
| !!! | AATAAAAAGGTTTTGAATCG+TGG | + | chr4.4:32772838-32772857 | None:intergenic | 25.0% |
| !!! | AGACTTTATATTTTAGAACG+TGG | + | chr4.4:32773678-32773697 | None:intergenic | 25.0% |
| !!! | ATGCGTTCAATTTTGATTTA+GGG | - | chr4.4:32772332-32772351 | MS.gene006556:intron | 25.0% |
| !!! | ATTTTCAAGTAGATAAGTCT+TGG | - | chr4.4:32775516-32775535 | MS.gene006556:intron | 25.0% |
| !!! | GACAGAGATTTATTTTATTC+AGG | - | chr4.4:32773433-32773452 | MS.gene006556:intron | 25.0% |
| !!! | TGACAATTTTCTCTACTTTT+TGG | - | chr4.4:32773463-32773482 | MS.gene006556:intron | 25.0% |
| !!! | TTTTCAAGTAGATAAGTCTT+GGG | - | chr4.4:32775517-32775536 | MS.gene006556:intron | 25.0% |
| AACATAGTGAACAAACGTTA+TGG | - | chr4.4:32772495-32772514 | MS.gene006556:CDS | 30.0% | |
| AACCTTTCATACTAAATTGC+CGG | + | chr4.4:32773020-32773039 | None:intergenic | 30.0% | |
| AAGATAAGAAAACCTGATCA+GGG | + | chr4.4:32774091-32774110 | None:intergenic | 30.0% | |
| AATCAAATATCAGCACCAAT+AGG | + | chr4.4:32775233-32775252 | None:intergenic | 30.0% | |
| AATCAACAGTAATTAGAGAG+GGG | + | chr4.4:32773497-32773516 | None:intergenic | 30.0% | |
| AGCTAAACCAAACATGAAAT+TGG | + | chr4.4:32772270-32772289 | None:intergenic | 30.0% | |
| AGGAAGTCTAAACATTAAGA+CGG | + | chr4.4:32775418-32775437 | None:intergenic | 30.0% | |
| AGTTACTGCTATATACTAGA+TGG | - | chr4.4:32775045-32775064 | MS.gene006556:intron | 30.0% | |
| CAAACAAATGCCCAAAAAAA+GGG | + | chr4.4:32775009-32775028 | None:intergenic | 30.0% | |
| CAATGTTACACACAATATTG+CGG | - | chr4.4:32775699-32775718 | MS.gene006556:CDS | 30.0% | |
| CAGTTTCAAACATGTTAGTT+AGG | - | chr4.4:32775776-32775795 | MS.gene006556:CDS | 30.0% | |
| CCTTGAATAAAATGTACCAT+TGG | + | chr4.4:32772433-32772452 | None:intergenic | 30.0% | |
| CGGTATTAAATCAATTAGAG+TGG | + | chr4.4:32774534-32774553 | None:intergenic | 30.0% | |
| GAGTGATATTGAAGAACTAA+AGG | - | chr4.4:32774329-32774348 | MS.gene006556:intron | 30.0% | |
| GGCTATGAATATTATTTCCA+AGG | - | chr4.4:32774263-32774282 | MS.gene006556:CDS | 30.0% | |
| GTCTATGTTATGGGTTTATA+CGG | - | chr4.4:32775122-32775141 | MS.gene006556:intron | 30.0% | |
| TATACCTGAACCAGAATAAA+AGG | + | chr4.4:32774760-32774779 | None:intergenic | 30.0% | |
| TCTAAAAAATGGTCCGTTAT+AGG | - | chr4.4:32772453-32772472 | MS.gene006556:intron | 30.0% | |
| TTGTTCTATACCAATTACCA+TGG | + | chr4.4:32772527-32772546 | None:intergenic | 30.0% | |
| ! | ATTGTTGTTCAATTATGCCT+TGG | - | chr4.4:32774826-32774845 | MS.gene006556:CDS | 30.0% |
| ! | ATTTCATGTTTGGTTTAGCT+TGG | - | chr4.4:32772270-32772289 | MS.gene006556:intron | 30.0% |
| ! | CAGATAAATTTTCCAACACA+GGG | + | chr4.4:32775572-32775591 | None:intergenic | 30.0% |
| ! | CCAATGGTACATTTTATTCA+AGG | - | chr4.4:32772430-32772449 | MS.gene006556:intron | 30.0% |
| ! | CTTTTAACGTGGTAAAAAAC+TGG | + | chr4.4:32773591-32773610 | None:intergenic | 30.0% |
| ! | GCAATGAATTTTTCATAGAC+TGG | + | chr4.4:32772687-32772706 | None:intergenic | 30.0% |
| ! | GTTTAGACTTCCTAATTTTG+TGG | - | chr4.4:32775425-32775444 | MS.gene006556:intron | 30.0% |
| ! | GTTTTGTCAATGATTAAGCA+CGG | - | chr4.4:32773818-32773837 | MS.gene006556:intron | 30.0% |
| ! | TAATTATTAGCCTCAGAAAC+TGG | - | chr4.4:32773869-32773888 | MS.gene006556:intron | 30.0% |
| ! | TTTCATGTTTGGTTTAGCTT+GGG | - | chr4.4:32772271-32772290 | MS.gene006556:intron | 30.0% |
| !! | GTTATGATGTGATTAGCTTT+AGG | - | chr4.4:32775384-32775403 | MS.gene006556:intron | 30.0% |
| !!! | CAATTTTCTCTACTTTTTGG+TGG | - | chr4.4:32773466-32773485 | MS.gene006556:intron | 30.0% |
| !!! | CATGCGTTCAATTTTGATTT+AGG | - | chr4.4:32772331-32772350 | MS.gene006556:intron | 30.0% |
| !!! | TTTACCTTTTATTCTGGTTC+AGG | - | chr4.4:32774753-32774772 | MS.gene006556:intron | 30.0% |
| AACTCAGATAATGACAAGCA+AGG | + | chr4.4:32775367-32775386 | None:intergenic | 35.0% | |
| AATCACAACATGAAATGGGT+AGG | + | chr4.4:32773917-32773936 | None:intergenic | 35.0% | |
| ACTCTTGCCTTTAATATTCC+AGG | + | chr4.4:32775823-32775842 | None:intergenic | 35.0% | |
| AGAGTTTATGCATAAGCTCT+TGG | - | chr4.4:32773284-32773303 | MS.gene006556:intron | 35.0% | |
| AGATAAGAAAACCTGATCAG+GGG | + | chr4.4:32774090-32774109 | None:intergenic | 35.0% | |
| AGGAAGAACAACTTACAATG+AGG | - | chr4.4:32773547-32773566 | MS.gene006556:CDS | 35.0% | |
| ATGAACTTAAGTAGTTGGCT+TGG | - | chr4.4:32774895-32774914 | MS.gene006556:intron | 35.0% | |
| ATTAAATAGACACAGCGTCT+TGG | - | chr4.4:32774442-32774461 | MS.gene006556:intron | 35.0% | |
| ATTGGAAGTAATGTATAGCC+AGG | + | chr4.4:32772415-32772434 | None:intergenic | 35.0% | |
| CAATTATGTTCTCAAGGCAA+TGG | - | chr4.4:32775645-32775664 | MS.gene006556:CDS | 35.0% | |
| CCAAACAAATGCCCAAAAAA+AGG | + | chr4.4:32775010-32775029 | None:intergenic | 35.0% | |
| CGCTAAGAATTTCATGACTT+TGG | + | chr4.4:32772812-32772831 | None:intergenic | 35.0% | |
| CGCTATAGCATTTATTGAGT+TGG | + | chr4.4:32773649-32773668 | None:intergenic | 35.0% | |
| CTCAATCATGGATAGCAAAT+CGG | - | chr4.4:32773618-32773637 | MS.gene006556:intron | 35.0% | |
| CTCTTGCCTTTAATATTCCA+GGG | + | chr4.4:32775822-32775841 | None:intergenic | 35.0% | |
| CTGGACAAAATGACCAAAAA+AGG | + | chr4.4:32774801-32774820 | None:intergenic | 35.0% | |
| GAAAATAGATCTTATCCAGC+TGG | - | chr4.4:32774957-32774976 | MS.gene006556:intron | 35.0% | |
| GAAACTAGTGTATCCTATTG+TGG | - | chr4.4:32775469-32775488 | MS.gene006556:intron | 35.0% | |
| GAACAACTTACAATGAGGTT+AGG | - | chr4.4:32773552-32773571 | MS.gene006556:CDS | 35.0% | |
| GAAGATAAGAAAACCTGATC+AGG | + | chr4.4:32774092-32774111 | None:intergenic | 35.0% | |
| GAATAATATGCTCATCCTGT+TGG | - | chr4.4:32775191-32775210 | MS.gene006556:intron | 35.0% | |
| GTACTGCATAAACATTGAGT+GGG | + | chr4.4:32772946-32772965 | None:intergenic | 35.0% | |
| GTATCAGACACTACCTATAA+CGG | + | chr4.4:32772469-32772488 | None:intergenic | 35.0% | |
| GTTATAGGTAGTGTCTGATA+CGG | - | chr4.4:32772468-32772487 | MS.gene006556:intron | 35.0% | |
| TAGTTAATTCACTAACCAGC+TGG | + | chr4.4:32774975-32774994 | None:intergenic | 35.0% | |
| TGACGACAATTATGTTCTCA+AGG | - | chr4.4:32775639-32775658 | MS.gene006556:CDS | 35.0% | |
| TGGCTATACATTACTTCCAA+TGG | - | chr4.4:32772414-32772433 | MS.gene006556:intron | 35.0% | |
| TGTGAGAAGGTAGAAAGTAA+AGG | - | chr4.4:32773527-32773546 | MS.gene006556:CDS | 35.0% | |
| TTAAATAGACACAGCGTCTT+GGG | - | chr4.4:32774443-32774462 | MS.gene006556:intron | 35.0% | |
| TTAAATCAATTAGAGTGGGC+TGG | + | chr4.4:32774529-32774548 | None:intergenic | 35.0% | |
| TTAGATCAGAACATCACTGA+AGG | + | chr4.4:32774404-32774423 | None:intergenic | 35.0% | |
| TTCTTCAATATCACTCAGAC+TGG | + | chr4.4:32774325-32774344 | None:intergenic | 35.0% | |
| TTTCATGACTTTGGCTGTTA+CGG | + | chr4.4:32772803-32772822 | None:intergenic | 35.0% | |
| ! | AAAAGCACAGTTCTCAATCA+TGG | - | chr4.4:32773606-32773625 | MS.gene006556:intron | 35.0% |
| ! | AACATGTTTGAAACTGACTG+AGG | + | chr4.4:32775772-32775791 | None:intergenic | 35.0% |
| ! | AATCTAGAAAGTGCAGAGAT+TGG | + | chr4.4:32772201-32772220 | None:intergenic | 35.0% |
| ! | ACTCTGGTTGCCTATTTTAT+GGG | - | chr4.4:32775100-32775119 | MS.gene006556:intron | 35.0% |
| ! | ATACACTAGTTTCCACTTTC+CGG | + | chr4.4:32775462-32775481 | None:intergenic | 35.0% |
| ! | GAATTTTCTGATCCAAGCAA+TGG | - | chr4.4:32774056-32774075 | MS.gene006556:intron | 35.0% |
| ! | GCAGATAAATTTTCCAACAC+AGG | + | chr4.4:32775573-32775592 | None:intergenic | 35.0% |
| ! | TACTCTGGTTGCCTATTTTA+TGG | - | chr4.4:32775099-32775118 | MS.gene006556:intron | 35.0% |
| ! | TCTGAGGCTAATAATTACCA+CGG | + | chr4.4:32773866-32773885 | None:intergenic | 35.0% |
| ! | TGATGCTCTGAATGTTCTTA+TGG | - | chr4.4:32774242-32774261 | MS.gene006556:intron | 35.0% |
| ! | TTGTTTAGTTCAGCTTACTC+TGG | - | chr4.4:32775084-32775103 | MS.gene006556:intron | 35.0% |
| ! | TTTTGTGGTATCATAAAGCC+CGG | - | chr4.4:32775440-32775459 | MS.gene006556:intron | 35.0% |
| !!! | ATCTCAGTATCTGCCTTTTT+TGG | - | chr4.4:32774785-32774804 | MS.gene006556:CDS | 35.0% |
| !!! | ATTAAGCACGGTGGTTTTTT+GGG | - | chr4.4:32773830-32773849 | MS.gene006556:intron | 35.0% |
| !!! | CCTTTTTTTGGGCATTTGTT+TGG | - | chr4.4:32775007-32775026 | MS.gene006556:intron | 35.0% |
| AAAGGCAGATACTGAGATGA+TGG | + | chr4.4:32774783-32774802 | None:intergenic | 40.0% | |
| AATTGTGAAACTTGCAGCAG+TGG | - | chr4.4:32773395-32773414 | MS.gene006556:intron | 40.0% | |
| ACTCAGCATTCAGCATACTA+AGG | + | chr4.4:32773364-32773383 | None:intergenic | 40.0% | |
| AGGATAAGTGCAACTTTGCA+AGG | + | chr4.4:32773102-32773121 | None:intergenic | 40.0% | |
| ATAAGTCTTGGGAGCTAGTT+AGG | - | chr4.4:32775528-32775547 | MS.gene006556:intron | 40.0% | |
| ATGAGAAAAACATCCGTCGA+AGG | - | chr4.4:32774214-32774233 | MS.gene006556:intron | 40.0% | |
| CTCAGCATTCAGCATACTAA+GGG | + | chr4.4:32773363-32773382 | None:intergenic | 40.0% | |
| CTCCGGCAATTTAGTATGAA+AGG | - | chr4.4:32773015-32773034 | MS.gene006556:intron | 40.0% | |
| GGCTTAGGAGTAGAATTGAA+AGG | - | chr4.4:32774464-32774483 | MS.gene006556:intron | 40.0% | |
| GGTACTGCATAAACATTGAG+TGG | + | chr4.4:32772947-32772966 | None:intergenic | 40.0% | |
| GTACCAAGAAGAAAAAGCGA+CGG | - | chr4.4:32772962-32772981 | MS.gene006556:intron | 40.0% | |
| GTGAACAAACGTTATGGAAG+CGG | - | chr4.4:32772501-32772520 | MS.gene006556:CDS | 40.0% | |
| GTTACACACAATATTGCGGA+TGG | - | chr4.4:32775703-32775722 | MS.gene006556:CDS | 40.0% | |
| TAAGTCTTGGGAGCTAGTTA+GGG | - | chr4.4:32775529-32775548 | MS.gene006556:intron | 40.0% | |
| TACCAAGAAGAAAAAGCGAC+GGG | - | chr4.4:32772963-32772982 | MS.gene006556:intron | 40.0% | |
| TCAGCATTCAGCATACTAAG+GGG | + | chr4.4:32773362-32773381 | None:intergenic | 40.0% | |
| TCCACTCCCTGGAATATTAA+AGG | - | chr4.4:32775813-32775832 | MS.gene006556:CDS | 40.0% | |
| TCCTATTGTGGTCAAACACT+CGG | - | chr4.4:32775481-32775500 | MS.gene006556:intron | 40.0% | |
| TGAGAAAAACATCCGTCGAA+GGG | - | chr4.4:32774215-32774234 | MS.gene006556:intron | 40.0% | |
| TGATATACTGGACTTGAACC+TGG | - | chr4.4:32772394-32772413 | MS.gene006556:intron | 40.0% | |
| TGCTTCGATAAGCTATTGTG+AGG | + | chr4.4:32773216-32773235 | None:intergenic | 40.0% | |
| TGTGTAACATTGTCACTCTG+TGG | + | chr4.4:32775691-32775710 | None:intergenic | 40.0% | |
| TTAATACCGGAATGCTAACC+TGG | - | chr4.4:32774545-32774564 | MS.gene006556:intron | 40.0% | |
| TTGTCAATGATTAAGCACGG+TGG | - | chr4.4:32773821-32773840 | MS.gene006556:intron | 40.0% | |
| TTTAATATTCCAGGGAGTGG+AGG | + | chr4.4:32775814-32775833 | None:intergenic | 40.0% | |
| ! | ATTTTCTGCAGTGTGTGAGA+AGG | - | chr4.4:32773514-32773533 | MS.gene006556:CDS | 40.0% |
| ! | TACACTAGTTTCCACTTTCC+GGG | + | chr4.4:32775461-32775480 | None:intergenic | 40.0% |
| ! | TGAGAACTGTGCTTTTAACG+TGG | + | chr4.4:32773602-32773621 | None:intergenic | 40.0% |
| ! | TTTTCTGATCCAAGCAATGG+TGG | - | chr4.4:32774059-32774078 | MS.gene006556:intron | 40.0% |
| !! | ACTTTCTAAGATCCATGACC+AGG | + | chr4.4:32775154-32775173 | None:intergenic | 40.0% |
| !! | GTTCTCAAGGCAATGGATTT+TGG | - | chr4.4:32775652-32775671 | MS.gene006556:CDS | 40.0% |
| !! | TCAAGGCAATGGATTTTGGT+GGG | - | chr4.4:32775656-32775675 | MS.gene006556:CDS | 40.0% |
| !! | TTTAGCTTGGGATGAGATTC+TGG | - | chr4.4:32772283-32772302 | MS.gene006556:intron | 40.0% |
| !!! | GATTAAGCACGGTGGTTTTT+TGG | - | chr4.4:32773829-32773848 | MS.gene006556:intron | 40.0% |
| AAGTCCACTACCAGTTTCTG+AGG | + | chr4.4:32773882-32773901 | None:intergenic | 45.0% | |
| ACAACATGAAATGGGTAGGC+AGG | + | chr4.4:32773913-32773932 | None:intergenic | 45.0% | |
| ACACAATATTGCGGATGGAG+GGG | - | chr4.4:32775708-32775727 | MS.gene006556:CDS | 45.0% | |
| ACACACAATATTGCGGATGG+AGG | - | chr4.4:32775706-32775725 | MS.gene006556:CDS | 45.0% | |
| AGCAATCCAGGTTAGCATTC+CGG | + | chr4.4:32774554-32774573 | None:intergenic | 45.0% | |
| AGGTAAAGATACACCTCCAC+TGG | + | chr4.4:32774740-32774759 | None:intergenic | 45.0% | |
| ATAAGAATGGAAGAGGGCTC+CGG | - | chr4.4:32772998-32773017 | MS.gene006556:intron | 45.0% | |
| ATACGGAGAATTCCTGGTCA+TGG | - | chr4.4:32775139-32775158 | MS.gene006556:intron | 45.0% | |
| ATAGGTGGCAGATGAACTTG+TGG | - | chr4.4:32774031-32774050 | MS.gene006556:intron | 45.0% | |
| ATATCACTCAGACTGGTACG+AGG | + | chr4.4:32774318-32774337 | None:intergenic | 45.0% | |
| CACACAATATTGCGGATGGA+GGG | - | chr4.4:32775707-32775726 | MS.gene006556:CDS | 45.0% | |
| CTGTTACGGATGTTGCGTTA+TGG | + | chr4.4:32772789-32772808 | None:intergenic | 45.0% | |
| GAAGAGGACGAGGAATTGAT+GGG | - | chr4.4:32771996-32772015 | MS.gene006556:CDS | 45.0% | |
| GCCTTTAATATTCCAGGGAG+TGG | + | chr4.4:32775817-32775836 | None:intergenic | 45.0% | |
| GGGGTGATAAGAATGGAAGA+GGG | - | chr4.4:32772992-32773011 | MS.gene006556:intron | 45.0% | |
| GGGTTTATACGGAGAATTCC+TGG | - | chr4.4:32775133-32775152 | MS.gene006556:intron | 45.0% | |
| GGTAAAGATACACCTCCACT+GGG | + | chr4.4:32774739-32774758 | None:intergenic | 45.0% | |
| GTATCATAAAGCCCGGAAAG+TGG | - | chr4.4:32775447-32775466 | MS.gene006556:intron | 45.0% | |
| GTCAGGCATGTATCAATCAC+AGG | - | chr4.4:32775744-32775763 | MS.gene006556:CDS | 45.0% | |
| TCCGAGTGTTTGACCACAAT+AGG | + | chr4.4:32775485-32775504 | None:intergenic | 45.0% | |
| TTAGCCTCAGAAACTGGTAG+TGG | - | chr4.4:32773875-32773894 | MS.gene006556:intron | 45.0% | |
| TTTGAGAGCAGCGTTATCAC+CGG | + | chr4.4:32772114-32772133 | None:intergenic | 45.0% | |
| ! | CTGTATCTTTTCTCTCTGCG+TGG | - | chr4.4:32774367-32774386 | MS.gene006556:intron | 45.0% |
| ! | GGATGTTGCGTTATGGATTG+TGG | + | chr4.4:32772782-32772801 | None:intergenic | 45.0% |
| ! | GTTATGGATTGTGGTCGTTG+CGG | + | chr4.4:32772773-32772792 | None:intergenic | 45.0% |
| !! | AAGGCAATGGATTTTGGTGG+GGG | - | chr4.4:32775658-32775677 | MS.gene006556:CDS | 45.0% |
| !! | CAAGGCAATGGATTTTGGTG+GGG | - | chr4.4:32775657-32775676 | MS.gene006556:CDS | 45.0% |
| !! | CTCAAGGCAATGGATTTTGG+TGG | - | chr4.4:32775655-32775674 | MS.gene006556:CDS | 45.0% |
| !!! | TTTTGGGATCAAGTTGTCCG+TGG | - | chr4.4:32773846-32773865 | MS.gene006556:intron | 45.0% |
| !! | AAAAAAAAATATAAGTAATA+CGG | + | chr4.4:32773950-32773969 | None:intergenic | 5.0% |
| !!! | TTTAATCAAATTTATATTTT+TGG | + | chr4.4:32774428-32774447 | None:intergenic | 5.0% |
| AAACGTTATGGAAGCGGCCA+TGG | - | chr4.4:32772507-32772526 | MS.gene006556:CDS | 50.0% | |
| AAAGATACACCTCCACTGGG+AGG | + | chr4.4:32774736-32774755 | None:intergenic | 50.0% | |
| AAGGAAAGCAGCCTATCTGC+AGG | - | chr4.4:32774483-32774502 | MS.gene006556:intron | 50.0% | |
| AATATTGCGGATGGAGGGGA+AGG | - | chr4.4:32775712-32775731 | MS.gene006556:CDS | 50.0% | |
| ATGGAAGCGGCCATGGTAAT+TGG | - | chr4.4:32772514-32772533 | MS.gene006556:CDS | 50.0% | |
| CGAAGAGGACGAGGAATTGA+TGG | - | chr4.4:32771995-32772014 | MS.gene006556:CDS | 50.0% | |
| GAGCATCATAGACCCTTCGA+CGG | + | chr4.4:32774230-32774249 | None:intergenic | 50.0% | |
| GCTGTTGGGGGTGATAAGAA+TGG | - | chr4.4:32772985-32773004 | MS.gene006556:intron | 50.0% | |
| GGGGGTGATAAGAATGGAAG+AGG | - | chr4.4:32772991-32773010 | MS.gene006556:intron | 50.0% | |
| GGTTGTGGAACTACGCTTTC+CGG | - | chr4.4:32772017-32772036 | MS.gene006556:CDS | 50.0% | |
| TCCACTTCCACAGTTGCATG+AGG | + | chr4.4:32775287-32775306 | None:intergenic | 50.0% | |
| TCCTCATGCAACTGTGGAAG+TGG | - | chr4.4:32775283-32775302 | MS.gene006556:intron | 50.0% | |
| TGCTGTGATGTGGCTCCTAT+TGG | - | chr4.4:32775215-32775234 | MS.gene006556:intron | 50.0% | |
| TTGTCGTCATGCAGCTCGAA+AGG | + | chr4.4:32775628-32775647 | None:intergenic | 50.0% | |
| ! | TGGTGCTTTTGTCCCTGTGT+TGG | - | chr4.4:32775557-32775576 | MS.gene006556:intron | 50.0% |
| !! | AAGAAAAAGCGACGGGCTGT+TGG | - | chr4.4:32772970-32772989 | MS.gene006556:intron | 50.0% |
| !! | AGAAAAAGCGACGGGCTGTT+GGG | - | chr4.4:32772971-32772990 | MS.gene006556:intron | 50.0% |
| !! | GACGAGGAATTGATGGGTTG+TGG | - | chr4.4:32772002-32772021 | MS.gene006556:CDS | 50.0% |
| !!! | AGCCCGTCGCTTTTTCTTCT+TGG | + | chr4.4:32772968-32772987 | None:intergenic | 50.0% |
| ACTACGCTTTCCGGCCAATC+AGG | - | chr4.4:32772026-32772045 | MS.gene006556:CDS | 55.0% | |
| AGACACAGCGTCTTGGGCTT+AGG | - | chr4.4:32774449-32774468 | MS.gene006556:intron | 55.0% | |
| AGACTCACGCAACTACTGCC+TGG | + | chr4.4:32772175-32772194 | None:intergenic | 55.0% | |
| AGCTCAGGAAATCCTCCCAG+TGG | - | chr4.4:32774721-32774740 | MS.gene006556:intron | 55.0% | |
| CATGAAATGGGTAGGCAGGC+AGG | + | chr4.4:32773909-32773928 | None:intergenic | 55.0% | |
| CTGCTCAAGCTCCTGCAGAT+AGG | + | chr4.4:32774497-32774516 | None:intergenic | 55.0% | |
| GACACGTCCTCATGCAACTG+TGG | - | chr4.4:32775277-32775296 | MS.gene006556:intron | 55.0% | |
| GACTCACGCAACTACTGCCT+GGG | + | chr4.4:32772174-32772193 | None:intergenic | 55.0% | |
| GGGGACAAACCACCATTGCT+TGG | + | chr4.4:32774071-32774090 | None:intergenic | 55.0% | |
| GTCTTGGGAGCTAGTTAGGG+TGG | - | chr4.4:32775532-32775551 | MS.gene006556:intron | 55.0% | |
| TCAATCGTCCGTGGACGAAG+AGG | - | chr4.4:32771980-32771999 | MS.gene006556:CDS | 55.0% | |
| TCAGGAAATCCTCCCAGTGG+AGG | - | chr4.4:32774724-32774743 | MS.gene006556:intron | 55.0% | |
| TCGTCCACGGACGATTGATG+CGG | + | chr4.4:32771978-32771997 | None:intergenic | 55.0% | |
| TTCCTCGTCCTCTTCGTCCA+CGG | + | chr4.4:32771991-32772010 | None:intergenic | 55.0% | |
| ! | GGGGAAGGTTCTAGCATGTC+AGG | - | chr4.4:32775727-32775746 | MS.gene006556:CDS | 55.0% |
| ! | TCCTGCTGGTTGAGCCTGAT+TGG | + | chr4.4:32772043-32772062 | None:intergenic | 55.0% |
| ! | TCCTGTTGGCTGCTGTGATG+TGG | - | chr4.4:32775205-32775224 | MS.gene006556:intron | 55.0% |
| ! | TGATGACGATGCTGCTTCCC+AGG | - | chr4.4:32772154-32772173 | MS.gene006556:CDS | 55.0% |
| ! | TGGTGGTTTGTCCCCTGATC+AGG | - | chr4.4:32774076-32774095 | MS.gene006556:intron | 55.0% |
| !! | AAAAAGCGACGGGCTGTTGG+GGG | - | chr4.4:32772973-32772992 | MS.gene006556:intron | 55.0% |
| !! | GAAAAAGCGACGGGCTGTTG+GGG | - | chr4.4:32772972-32772991 | MS.gene006556:intron | 55.0% |
| ACTCCGGCTAGACGGTAACC+CGG | + | chr4.4:32772069-32772088 | None:intergenic | 60.0% | |
| CCAGGGAGTGGAGGTGATGT+CGG | + | chr4.4:32775805-32775824 | None:intergenic | 60.0% | |
| GAGAGCAGCGTTATCACCGG+CGG | + | chr4.4:32772111-32772130 | None:intergenic | 60.0% | |
| GCCAATCAGGCTCAACCAGC+AGG | - | chr4.4:32772039-32772058 | MS.gene006556:CDS | 60.0% | |
| GCCACATCACAGCAGCCAAC+AGG | + | chr4.4:32775209-32775228 | None:intergenic | 60.0% | |
| GCTGGTTGAGCCTGATTGGC+CGG | + | chr4.4:32772039-32772058 | None:intergenic | 60.0% | |
| GGGAGCTAGTTAGGGTGGTG+TGG | - | chr4.4:32775537-32775556 | MS.gene006556:intron | 60.0% | |
| GTCTGCTCACTCCGGCTAGA+CGG | + | chr4.4:32772077-32772096 | None:intergenic | 60.0% | |
| TAGCCGGAGTGAGCAGACCA+CGG | - | chr4.4:32772079-32772098 | MS.gene006556:CDS | 60.0% | |
| AGCCGGAGTGAGCAGACCAC+GGG | - | chr4.4:32772080-32772099 | MS.gene006556:CDS | 65.0% | |
| CCGACATCACCTCCACTCCC+TGG | - | chr4.4:32775802-32775821 | MS.gene006556:CDS | 65.0% | |
| GCAGCCGCATCAATCGTCCG+TGG | - | chr4.4:32771971-32771990 | MS.gene006556:CDS | 65.0% | |
| GGGAGTGGAGGTGATGTCGG+AGG | + | chr4.4:32775802-32775821 | None:intergenic | 65.0% | |
| GTCCGTGGACGAAGAGGACG+AGG | - | chr4.4:32771986-32772005 | MS.gene006556:CDS | 65.0% | |
| GTGCCGGGTTACCGTCTAGC+CGG | - | chr4.4:32772063-32772082 | MS.gene006556:CDS | 65.0% | |
| TCCCCGTGGTCTGCTCACTC+CGG | + | chr4.4:32772085-32772104 | None:intergenic | 65.0% | |
| ! | GGCTCAACCAGCAGGAGTGC+CGG | - | chr4.4:32772047-32772066 | MS.gene006556:CDS | 65.0% |
| !! | GCTCAACCAGCAGGAGTGCC+GGG | - | chr4.4:32772048-32772067 | MS.gene006556:CDS | 65.0% |
| CGGTAACCCGGCACTCCTGC+TGG | + | chr4.4:32772057-32772076 | None:intergenic | 70.0% | |
| GCCGGAGTGAGCAGACCACG+GGG | - | chr4.4:32772081-32772100 | MS.gene006556:CDS | 70.0% | |
| ATCACCGGCGGCTGTCCCCG+TGG | + | chr4.4:32772099-32772118 | None:intergenic | 75.0% | |
| CAGACCACGGGGACAGCCGC+CGG | - | chr4.4:32772092-32772111 | MS.gene006556:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 32771963 | 32775858 | 32771963 | ID=MS.gene006556 |
| chr4.4 | mRNA | 32771963 | 32775858 | 32771963 | ID=MS.gene006556.t1;Parent=MS.gene006556 |
| chr4.4 | exon | 32775635 | 32775858 | 32775635 | ID=MS.gene006556.t1.exon1;Parent=MS.gene006556.t1 |
| chr4.4 | CDS | 32775635 | 32775858 | 32775635 | ID=cds.MS.gene006556.t1;Parent=MS.gene006556.t1 |
| chr4.4 | exon | 32774785 | 32774858 | 32774785 | ID=MS.gene006556.t1.exon2;Parent=MS.gene006556.t1 |
| chr4.4 | CDS | 32774785 | 32774858 | 32774785 | ID=cds.MS.gene006556.t1;Parent=MS.gene006556.t1 |
| chr4.4 | exon | 32774253 | 32774296 | 32774253 | ID=MS.gene006556.t1.exon3;Parent=MS.gene006556.t1 |
| chr4.4 | CDS | 32774253 | 32774296 | 32774253 | ID=cds.MS.gene006556.t1;Parent=MS.gene006556.t1 |
| chr4.4 | exon | 32773724 | 32773786 | 32773724 | ID=MS.gene006556.t1.exon4;Parent=MS.gene006556.t1 |
| chr4.4 | CDS | 32773724 | 32773786 | 32773724 | ID=cds.MS.gene006556.t1;Parent=MS.gene006556.t1 |
| chr4.4 | exon | 32773471 | 32773617 | 32773471 | ID=MS.gene006556.t1.exon5;Parent=MS.gene006556.t1 |
| chr4.4 | CDS | 32773471 | 32773617 | 32773471 | ID=cds.MS.gene006556.t1;Parent=MS.gene006556.t1 |
| chr4.4 | exon | 32773302 | 32773370 | 32773302 | ID=MS.gene006556.t1.exon6;Parent=MS.gene006556.t1 |
| chr4.4 | CDS | 32773302 | 32773370 | 32773302 | ID=cds.MS.gene006556.t1;Parent=MS.gene006556.t1 |
| chr4.4 | exon | 32773047 | 32773145 | 32773047 | ID=MS.gene006556.t1.exon7;Parent=MS.gene006556.t1 |
| chr4.4 | CDS | 32773047 | 32773145 | 32773047 | ID=cds.MS.gene006556.t1;Parent=MS.gene006556.t1 |
| chr4.4 | exon | 32772473 | 32772543 | 32772473 | ID=MS.gene006556.t1.exon8;Parent=MS.gene006556.t1 |
| chr4.4 | CDS | 32772473 | 32772543 | 32772473 | ID=cds.MS.gene006556.t1;Parent=MS.gene006556.t1 |
| chr4.4 | exon | 32771963 | 32772200 | 32771963 | ID=MS.gene006556.t1.exon9;Parent=MS.gene006556.t1 |
| chr4.4 | CDS | 32771963 | 32772200 | 32771963 | ID=cds.MS.gene006556.t1;Parent=MS.gene006556.t1 |
| Gene Sequence |
| Protein sequence |
