AlfalfaGEDB | MS.gene94307

M. sativa cultivar XinJiangDaYe / MS.gene94307

KEGG: K11649
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0097159 GO:1901363
PFAM: PF00249.34 PF04433.20 PF16495.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94307.t1	XP_003616869.1	70.6	419	58	6	5	360	17	433	6.10E-145	523.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94307.t1	Q84JG2	43.3	379	140	6	48	351	85	463	1.7e-71	271.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94307.t1	G7KH84	70.6	419	58	6	5	360	17	433	4.4e-145	523.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene94307	MS.gene64820	PPI
MS.gene94307	MS.gene056335	PPI
MS.gene94307	MS.gene58112	PPI
MS.gene006557	MS.gene94307	PPI
MS.gene92318	MS.gene94307	PPI
MS.gene94307	MS.gene89203	PPI
MS.gene58285	MS.gene94307	PPI
MS.gene94307	MS.gene00233	PPI
MS.gene94307	MS.gene068178	PPI
MS.gene94307	MS.gene065792	PPI
MS.gene94307	MS.gene47573	PPI
MS.gene94307	MS.gene027904	PPI
MS.gene027907	MS.gene94307	PPI
MS.gene68134	MS.gene94307	PPI
MS.gene94307	MS.gene059054	PPI
MS.gene58116	MS.gene94307	PPI
MS.gene94307	MS.gene024895	PPI
MS.gene99648	MS.gene94307	PPI
MS.gene94307	MS.gene031750	PPI
MS.gene94307	MS.gene26084	PPI
MS.gene94307	MS.gene78227	PPI
MS.gene94307	MS.gene70258	PPI
MS.gene28432	MS.gene94307	PPI
MS.gene94307	MS.gene65125	PPI
MS.gene94307	MS.gene021887	PPI
MS.gene014197	MS.gene94307	PPI
MS.gene94307	MS.gene23886	PPI
MS.gene94307	MS.gene015760	PPI
MS.gene78924	MS.gene94307	PPI
MS.gene94307	MS.gene29445	PPI
MS.gene94307	MS.gene78224	PPI
MS.gene94307	MS.gene038612	PPI
MS.gene94307	MS.gene68733	PPI
MS.gene94307	MS.gene065891	PPI
MS.gene39538	MS.gene94307	PPI
MS.gene78922	MS.gene94307	PPI
MS.gene071851	MS.gene94307	PPI
MS.gene28434	MS.gene94307	PPI
MS.gene94307	MS.gene030661	PPI
MS.gene000128	MS.gene94307	PPI
MS.gene94307	MS.gene28438	PPI
MS.gene94307	MS.gene91416	PPI
MS.gene94307	MS.gene80094	PPI
MS.gene94307	MS.gene031751	PPI
MS.gene94307	MS.gene91631	PPI
MS.gene94307	MS.gene006556	PPI
MS.gene94307	MS.gene04748	PPI
MS.gene94307	MS.gene065890	PPI
MS.gene94307	MS.gene063673	PPI
MS.gene94307	MS.gene73873	PPI
MS.gene94307	MS.gene64164	PPI
MS.gene94307	MS.gene26406	PPI
MS.gene94307	MS.gene70990	PPI
MS.gene94307	MS.gene068179	PPI
MS.gene97701	MS.gene94307	PPI
MS.gene94307	MS.gene67685	PPI
MS.gene94307	MS.gene027909	PPI
MS.gene94307	MS.gene70261	PPI
MS.gene94307	MS.gene009155	PPI
MS.gene94307	MS.gene006560	PPI
MS.gene049111	MS.gene94307	PPI
MS.gene94307	MS.gene063084	PPI
MS.gene70263	MS.gene94307	PPI
MS.gene94307	MS.gene97703	PPI
MS.gene94307	MS.gene58114	PPI
MS.gene94307	MS.gene030664	PPI
MS.gene94307	MS.gene030666	PPI
MS.gene66051	MS.gene94307	PPI
MS.gene67503	MS.gene94307	PPI
MS.gene94307	MS.gene05905	PPI
MS.gene006555	MS.gene94307	PPI
MS.gene94307	MS.gene057458	PPI
MS.gene94307	MS.gene017431	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94307.t1	MTR_3g116120	68.468	444	53	8	3	360	41	483	0.0	553
MS.gene94307.t1	MTR_5g085170	70.644	419	58	6	5	360	17	433	0.0	552
MS.gene94307.t1	MTR_6g053260	67.867	361	59	8	8	357	20	334	1.40e-138	410
MS.gene94307.t1	MTR_3g099000	51.562	64	31	0	41	104	46	109	4.19e-15	77.0
MS.gene94307.t1	MTR_3g099000	38.889	90	44	1	138	216	203	292	2.77e-13	71.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94307.t1	AT2G33610	43.307	381	137	7	48	351	85	463	2.37e-94	289
MS.gene94307.t1	AT2G47620	30.738	244	106	6	34	218	36	275	5.03e-19	88.6
MS.gene94307.t1	AT2G47620	30.738	244	106	6	34	218	36	275	8.38e-19	87.4
MS.gene94307.t1	AT1G21700	23.701	308	149	9	49	270	214	521	4.54e-18	86.3

Find 75 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGAAGCTATTACAAATTTC+GGG	0.188443	6.2:-43050200	MS.gene94307:CDS
CTTGAAGCTATTACAAATTT+CGG	0.191024	6.2:-43050201	MS.gene94307:CDS
GTCGGTGACGTTGGTTCTAT+TGG	0.297906	6.2:-43050507	MS.gene94307:CDS
GGCTGCTTTCCTTTCTGCTT+TGG	0.311179	6.2:-43049974	MS.gene94307:CDS
TTGTAAAACCCTAGGGTTCT+TGG	0.325714	6.2:+43050612	None:intergenic
GCTTTCCTTTCTGCTTTGGC+AGG	0.337459	6.2:-43049970	MS.gene94307:CDS
CGTTCTGGTAATGGGACTTC+CGG	0.348894	6.2:+43050732	None:intergenic
TTGCTCATCAAGTTGTTGTT+AGG	0.357260	6.2:-43050161	MS.gene94307:CDS
CCTAGGGTTCTTGGAAGATT+CGG	0.357797	6.2:+43050621	None:intergenic
CTAGGGTTCTTGGAAGATTC+GGG	0.380857	6.2:+43050622	None:intergenic
AATGTGTCTCACACCTCTTA+TGG	0.384773	6.2:-43050022	MS.gene94307:CDS
ATTCGTGGAAACTATCGAAT+TGG	0.400850	6.2:-43050282	MS.gene94307:CDS
TTACAAATTTCGGGGATGAT+TGG	0.415906	6.2:-43050191	MS.gene94307:CDS
GCAGATTCTCTTAGCTTCAT+TGG	0.416279	6.2:+43050368	None:intergenic
CATAATCCTTCTTCTTTGCT+CGG	0.417389	6.2:-43050441	MS.gene94307:CDS
CCTTTCTGCTTTGGCAGGGA+CGG	0.421374	6.2:-43049965	MS.gene94307:CDS
TCTTCGTTTGCTCCAACTGC+TGG	0.436192	6.2:+43049666	None:intergenic
AATGCTTCAGATTCTATTCA+AGG	0.436376	6.2:-43049836	MS.gene94307:intron
ACGGATTTCGCATTCGTGAA+TGG	0.445293	6.2:+43050651	None:intergenic
TGTAGTATTTGTAAAACCCT+AGG	0.450328	6.2:+43050604	None:intergenic
CAAAATTGATAAGCTTGTCC+TGG	0.455951	6.2:+43049720	None:intergenic
GTAGAATTTGACTCTGCATC+GGG	0.463627	6.2:+43050414	None:intergenic
TGGAAGATTCGGGAATGTTA+CGG	0.464080	6.2:+43050632	None:intergenic
GCCACTCAAGATGGTTCTCA+TGG	0.468828	6.2:-43050678	MS.gene94307:CDS
ATTCTCTTAGCTTCATTGGC+AGG	0.470496	6.2:+43050372	None:intergenic
AGTTCAGATGAAAATAATCC+AGG	0.475982	6.2:-43049738	MS.gene94307:CDS
TTCTACGGAATCTCCTTCTC+TGG	0.483808	6.2:-43050397	MS.gene94307:CDS
TTAATCCTTGCCACTCAAGA+TGG	0.491756	6.2:-43050687	MS.gene94307:CDS
CCGAATCTTCCAAGAACCCT+AGG	0.500165	6.2:-43050621	MS.gene94307:CDS
CGTAGAATTTGACTCTGCAT+CGG	0.506933	6.2:+43050413	None:intergenic
GGATTTCTAGCATCCATAAG+AGG	0.514520	6.2:+43050009	None:intergenic
CTTTCCTTTCTGCTTTGGCA+GGG	0.515547	6.2:-43049969	MS.gene94307:CDS
TGATTGCCTTCTCCGGTCGT+TGG	0.518632	6.2:+43049593	None:intergenic
TGCAAATTTAAAGCTTGAGA+AGG	0.519176	6.2:-43049801	MS.gene94307:CDS
TTGAGTGGCAAGGATTAAGT+TGG	0.522775	6.2:+43050692	None:intergenic
GTAGTATTTGTAAAACCCTA+GGG	0.522990	6.2:+43050605	None:intergenic
ATAAAAGATTAAGCTGATCA+AGG	0.525789	6.2:+43049633	None:intergenic
AGAACCAACGTCACCGACTA+GGG	0.528878	6.2:+43050512	None:intergenic
ACGAGCAACACATTCCTTGT+CGG	0.529759	6.2:+43050137	None:intergenic
GGCTTCAACTGATCGCCAAA+AGG	0.531669	6.2:+43050102	None:intergenic
TGGAAACTATCGAATTGGTA+TGG	0.532567	6.2:-43050277	MS.gene94307:CDS
GAATCAGAAACTGTTGCGTC+GGG	0.534084	6.2:-43050060	MS.gene94307:CDS
AAAACATCTGCACCAACGAC+CGG	0.535739	6.2:-43049605	MS.gene94307:CDS
TAGAACCAACGTCACCGACT+AGG	0.536779	6.2:+43050511	None:intergenic
TCTGCACCAACGACCGGAGA+AGG	0.536832	6.2:-43049599	MS.gene94307:CDS
CGTCATATTATTCTTATCAC+AGG	0.538639	6.2:+43050323	None:intergenic
TAGAAATCCTACCATGGCTC+AGG	0.541019	6.2:-43049995	MS.gene94307:CDS
GATTCACATTCAGCATCAGC+GGG	0.549492	6.2:+43050078	None:intergenic
TTCTGCTTTGGCAGGGACGG+AGG	0.550159	6.2:-43049962	MS.gene94307:CDS
CGATGCAGAGTCAAATTCTA+CGG	0.551271	6.2:-43050412	MS.gene94307:CDS
AAGTGGTAAACGAATGGTTC+CGG	0.553128	6.2:-43050751	None:intergenic
TGAGGATTTAGACGTGCTGA+TGG	0.555586	6.2:-43049699	MS.gene94307:CDS
GGTTTACCGAGCAAAGAAGA+AGG	0.556500	6.2:+43050435	None:intergenic
CGAATCTTCCAAGAACCCTA+GGG	0.558609	6.2:-43050620	MS.gene94307:CDS
TCATTGGCAGGCACCAGAGA+AGG	0.560713	6.2:+43050384	None:intergenic
TGAATCAGAAACTGTTGCGT+CGG	0.561653	6.2:-43050061	MS.gene94307:CDS
CCGTCCCTGCCAAAGCAGAA+AGG	0.564962	6.2:+43049965	None:intergenic
GAGAATCTGCAGTGGCTGCA+TGG	0.566176	6.2:-43050355	MS.gene94307:CDS
GATTAAGTTGGCGTCGCTAG+AGG	0.567817	6.2:+43050704	None:intergenic
CCACTCAAGATGGTTCTCAT+GGG	0.578308	6.2:-43050677	MS.gene94307:CDS
AAGGAAAGCAGCCTGAGCCA+TGG	0.591714	6.2:+43049984	None:intergenic
TGATTCACATTCAGCATCAG+CGG	0.598353	6.2:+43050077	None:intergenic
TGAAGCTATTACAAATTTCG+GGG	0.621595	6.2:-43050199	MS.gene94307:CDS
AATTGGTATGGAGATAAGTG+AGG	0.626402	6.2:-43050265	MS.gene94307:CDS
TCACATTCAGCATCAGCGGG+AGG	0.629791	6.2:+43050081	None:intergenic
AAAGCAGCCTGAGCCATGGT+AGG	0.634841	6.2:+43049988	None:intergenic
CCCATGAGAACCATCTTGAG+TGG	0.645025	6.2:+43050677	None:intergenic
GAGAACCATCTTGAGTGGCA+AGG	0.657195	6.2:+43050682	None:intergenic
GATGTTCGCAAAACCCTAGT+CGG	0.661918	6.2:-43050525	MS.gene94307:CDS
GGATGCTAGAAATCCTACCA+TGG	0.666173	6.2:-43050001	MS.gene94307:CDS
ATAATATGACGTTGTGTGCG+AGG	0.667737	6.2:-43050311	MS.gene94307:CDS
TGAGAAGGAAGAATCAGACG+TGG	0.680762	6.2:-43049786	MS.gene94307:CDS
AAAACCCTAGTCGGTGACGT+TGG	0.681388	6.2:-43050516	MS.gene94307:CDS
GAAGCTAAGAGAATCTGCAG+TGG	0.706689	6.2:-43050363	MS.gene94307:CDS
AGTTGTTGTTAGGACCGACA+AGG	0.719872	6.2:-43050151	MS.gene94307:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTAATTACCAATTATTTCCA+AGG	-	chr6.2:43050418-43050437	MS.gene94307:CDS	20.0%
!	ATAAAAGATTAAGCTGATCA+AGG	+	chr6.2:43050685-43050704	None:intergenic	25.0%
!	ATGTATTCCTTGGAAATAAT+TGG	+	chr6.2:43050428-43050447	None:intergenic	25.0%
!	CTTGAAGCTATTACAAATTT+CGG	-	chr6.2:43050114-43050133	MS.gene94307:CDS	25.0%
!	TTGAAGCTATTACAAATTTC+GGG	-	chr6.2:43050115-43050134	MS.gene94307:CDS	25.0%
	AATGCTTCAGATTCTATTCA+AGG	-	chr6.2:43050479-43050498	MS.gene94307:CDS	30.0%
	AGTTCAGATGAAAATAATCC+AGG	-	chr6.2:43050577-43050596	MS.gene94307:CDS	30.0%
	CGTCATATTATTCTTATCAC+AGG	+	chr6.2:43049995-43050014	None:intergenic	30.0%
	GTAGTATTTGTAAAACCCTA+GGG	+	chr6.2:43049713-43049732	None:intergenic	30.0%
	TGAAGCTATTACAAATTTCG+GGG	-	chr6.2:43050116-43050135	MS.gene94307:CDS	30.0%
	TGTAGTATTTGTAAAACCCT+AGG	+	chr6.2:43049714-43049733	None:intergenic	30.0%
!	TGCAAATTTAAAGCTTGAGA+AGG	-	chr6.2:43050514-43050533	MS.gene94307:CDS	30.0%
!!	CTTTGATTTTCTTGAAGCTT+GGG	-	chr6.2:43049837-43049856	MS.gene94307:intron	30.0%
!!	TCTTTGATTTTCTTGAAGCT+TGG	-	chr6.2:43049836-43049855	MS.gene94307:intron	30.0%
!!	TTTGATTTTCTTGAAGCTTG+GGG	-	chr6.2:43049838-43049857	MS.gene94307:intron	30.0%
	AATTGGTATGGAGATAAGTG+AGG	-	chr6.2:43050050-43050069	MS.gene94307:CDS	35.0%
	ATTCGTGGAAACTATCGAAT+TGG	-	chr6.2:43050033-43050052	MS.gene94307:CDS	35.0%
	CAAAATTGATAAGCTTGTCC+TGG	+	chr6.2:43050598-43050617	None:intergenic	35.0%
	CATAATCCTTCTTCTTTGCT+CGG	-	chr6.2:43049874-43049893	MS.gene94307:intron	35.0%
	GTGAGGAGACAAAAAATGAA+TGG	-	chr6.2:43050067-43050086	MS.gene94307:CDS	35.0%
	TGGAAACTATCGAATTGGTA+TGG	-	chr6.2:43050038-43050057	MS.gene94307:CDS	35.0%
	TTACAAATTTCGGGGATGAT+TGG	-	chr6.2:43050124-43050143	MS.gene94307:CDS	35.0%
!	GGACAAGCTTATCAATTTTG+AGG	-	chr6.2:43050598-43050617	MS.gene94307:CDS	35.0%
!	GTGAAGGTGATTTTTCTGTT+GGG	+	chr6.2:43049769-43049788	None:intergenic	35.0%
!	TTGCTCATCAAGTTGTTGTT+AGG	-	chr6.2:43050154-43050173	MS.gene94307:CDS	35.0%
!	TTTTACATGATTGCCTTCTC+CGG	+	chr6.2:43050732-43050751	None:intergenic	35.0%
!!	AAAAAATGAATGGACTGAGG+AGG	-	chr6.2:43050077-43050096	MS.gene94307:CDS	35.0%
!!	GACAAAAAATGAATGGACTG+AGG	-	chr6.2:43050074-43050093	MS.gene94307:CDS	35.0%
	AATGTGTCTCACACCTCTTA+TGG	-	chr6.2:43050293-43050312	MS.gene94307:CDS	40.0%
	AGATGCTTTGCATTCAATGG+TGG	-	chr6.2:43050455-43050474	MS.gene94307:CDS	40.0%
	ATAATATGACGTTGTGTGCG+AGG	-	chr6.2:43050004-43050023	MS.gene94307:CDS	40.0%
	ATTCTCTTAGCTTCATTGGC+AGG	+	chr6.2:43049946-43049965	None:intergenic	40.0%
	CGATGCAGAGTCAAATTCTA+CGG	-	chr6.2:43049903-43049922	MS.gene94307:intron	40.0%
	CGTAGAATTTGACTCTGCAT+CGG	+	chr6.2:43049905-43049924	None:intergenic	40.0%
	GCAAGATGCTTTGCATTCAA+TGG	-	chr6.2:43050452-43050471	MS.gene94307:CDS	40.0%
	GCAGATTCTCTTAGCTTCAT+TGG	+	chr6.2:43049950-43049969	None:intergenic	40.0%
	GTAGAATTTGACTCTGCATC+GGG	+	chr6.2:43049904-43049923	None:intergenic	40.0%
	TCTTGCTGCAATGTATTCCT+TGG	+	chr6.2:43050438-43050457	None:intergenic	40.0%
	TGAATCAGAAACTGTTGCGT+CGG	-	chr6.2:43050254-43050273	MS.gene94307:CDS	40.0%
	TGATTCACATTCAGCATCAG+CGG	+	chr6.2:43050241-43050260	None:intergenic	40.0%
	TGGAAGATTCGGGAATGTTA+CGG	+	chr6.2:43049686-43049705	None:intergenic	40.0%
	TTAATCCTTGCCACTCAAGA+TGG	-	chr6.2:43049628-43049647	MS.gene94307:CDS	40.0%
	TTGAGTGGCAAGGATTAAGT+TGG	+	chr6.2:43049626-43049645	None:intergenic	40.0%
	TTGTAAAACCCTAGGGTTCT+TGG	+	chr6.2:43049706-43049725	None:intergenic	40.0%
!	AGGTTTTGCGTTCTGGTAAT+GGG	+	chr6.2:43049594-43049613	None:intergenic	40.0%
!	GGTGAAGGTGATTTTTCTGT+TGG	+	chr6.2:43049770-43049789	None:intergenic	40.0%
!!	CGTGGAAAAAGCTATTTCTG+AGG	-	chr6.2:43050547-43050566	MS.gene94307:CDS	40.0%
!!	GGATTTCTAGCATCCATAAG+AGG	+	chr6.2:43050309-43050328	None:intergenic	40.0%
!!!	CGTTTTCTAGAGCTTCCTTT+TGG	-	chr6.2:43050198-43050217	MS.gene94307:CDS	40.0%
	AAAACATCTGCACCAACGAC+CGG	-	chr6.2:43050710-43050729	MS.gene94307:CDS	45.0%
	ACGAGCAACACATTCCTTGT+CGG	+	chr6.2:43050181-43050200	None:intergenic	45.0%
	ACGGATTTCGCATTCGTGAA+TGG	+	chr6.2:43049667-43049686	None:intergenic	45.0%
	CCACTCAAGATGGTTCTCAT+GGG	-	chr6.2:43049638-43049657	MS.gene94307:CDS	45.0%
	CCTAGGGTTCTTGGAAGATT+CGG	+	chr6.2:43049697-43049716	None:intergenic	45.0%
	CGAATCTTCCAAGAACCCTA+GGG	-	chr6.2:43049695-43049714	MS.gene94307:CDS	45.0%
	CTAGGGTTCTTGGAAGATTC+GGG	+	chr6.2:43049696-43049715	None:intergenic	45.0%
	CTTTCCTTTCTGCTTTGGCA+GGG	-	chr6.2:43050346-43050365	MS.gene94307:CDS	45.0%
	GAAGCTAAGAGAATCTGCAG+TGG	-	chr6.2:43049952-43049971	MS.gene94307:CDS	45.0%
	GAATCAGAAACTGTTGCGTC+GGG	-	chr6.2:43050255-43050274	MS.gene94307:CDS	45.0%
	GATGTTCGCAAAACCCTAGT+CGG	-	chr6.2:43049790-43049809	MS.gene94307:CDS	45.0%
	GATTCACATTCAGCATCAGC+GGG	+	chr6.2:43050240-43050259	None:intergenic	45.0%
	GGATGCTAGAAATCCTACCA+TGG	-	chr6.2:43050314-43050333	MS.gene94307:CDS	45.0%
	GGTTTACCGAGCAAAGAAGA+AGG	+	chr6.2:43049883-43049902	None:intergenic	45.0%
	TAGAAATCCTACCATGGCTC+AGG	-	chr6.2:43050320-43050339	MS.gene94307:CDS	45.0%
	TGAGAAGGAAGAATCAGACG+TGG	-	chr6.2:43050529-43050548	MS.gene94307:CDS	45.0%
	TGAGGATTTAGACGTGCTGA+TGG	-	chr6.2:43050616-43050635	MS.gene94307:CDS	45.0%
	TTCTACGGAATCTCCTTCTC+TGG	-	chr6.2:43049918-43049937	MS.gene94307:intron	45.0%
!	AGTTGTTGTTAGGACCGACA+AGG	-	chr6.2:43050164-43050183	MS.gene94307:CDS	45.0%
!	GACTAGGGTTTTGCGAACAT+CGG	+	chr6.2:43049791-43049810	None:intergenic	45.0%
!	GAGGTTTTGCGTTCTGGTAA+TGG	+	chr6.2:43049595-43049614	None:intergenic	45.0%
!!	TGTGCGAGGTGTTTTATTCG+TGG	-	chr6.2:43050018-43050037	MS.gene94307:CDS	45.0%
	AAAACCCTAGTCGGTGACGT+TGG	-	chr6.2:43049799-43049818	MS.gene94307:CDS	50.0%
	CCCATGAGAACCATCTTGAG+TGG	+	chr6.2:43049641-43049660	None:intergenic	50.0%
	CCGAATCTTCCAAGAACCCT+AGG	-	chr6.2:43049694-43049713	MS.gene94307:CDS	50.0%
	GAGAACCATCTTGAGTGGCA+AGG	+	chr6.2:43049636-43049655	None:intergenic	50.0%
	GCCACTCAAGATGGTTCTCA+TGG	-	chr6.2:43049637-43049656	MS.gene94307:CDS	50.0%
	GCTTTCCTTTCTGCTTTGGC+AGG	-	chr6.2:43050345-43050364	MS.gene94307:CDS	50.0%
	GGAAAAAGAACGCCAGCAGT+TGG	-	chr6.2:43050637-43050656	MS.gene94307:CDS	50.0%
	GGCTTCAACTGATCGCCAAA+AGG	+	chr6.2:43050216-43050235	None:intergenic	50.0%
	TCTTCGTTTGCTCCAACTGC+TGG	+	chr6.2:43050652-43050671	None:intergenic	50.0%
!	AGAACCAACGTCACCGACTA+GGG	+	chr6.2:43049806-43049825	None:intergenic	50.0%
!	GGCTGCTTTCCTTTCTGCTT+TGG	-	chr6.2:43050341-43050360	MS.gene94307:CDS	50.0%
!	GGTTTTGCGAACATCGGTGA+AGG	+	chr6.2:43049785-43049804	None:intergenic	50.0%
!	TAGAACCAACGTCACCGACT+AGG	+	chr6.2:43049807-43049826	None:intergenic	50.0%
!	TCGCTAGAGGTTTTGCGTTC+TGG	+	chr6.2:43049601-43049620	None:intergenic	50.0%
!!	CGTTCTGGTAATGGGACTTC+CGG	+	chr6.2:43049586-43049605	None:intergenic	50.0%
!!	GATTAAGTTGGCGTCGCTAG+AGG	+	chr6.2:43049614-43049633	None:intergenic	50.0%
!!	GTCGGTGACGTTGGTTCTAT+TGG	-	chr6.2:43049808-43049827	MS.gene94307:CDS	50.0%
	AAAGCAGCCTGAGCCATGGT+AGG	+	chr6.2:43050330-43050349	None:intergenic	55.0%
	AAGGAAAGCAGCCTGAGCCA+TGG	+	chr6.2:43050334-43050353	None:intergenic	55.0%
	CCTTTCTGCTTTGGCAGGGA+CGG	-	chr6.2:43050350-43050369	MS.gene94307:CDS	55.0%
	GAGAATCTGCAGTGGCTGCA+TGG	-	chr6.2:43049960-43049979	MS.gene94307:CDS	55.0%
	TCACATTCAGCATCAGCGGG+AGG	+	chr6.2:43050237-43050256	None:intergenic	55.0%
	TCATTGGCAGGCACCAGAGA+AGG	+	chr6.2:43049934-43049953	None:intergenic	55.0%
	TGATTGCCTTCTCCGGTCGT+TGG	+	chr6.2:43050725-43050744	None:intergenic	55.0%
	CCGTCCCTGCCAAAGCAGAA+AGG	+	chr6.2:43050353-43050372	None:intergenic	60.0%
	TCTGCACCAACGACCGGAGA+AGG	-	chr6.2:43050716-43050735	MS.gene94307:CDS	60.0%
	TTCTGCTTTGGCAGGGACGG+AGG	-	chr6.2:43050353-43050372	MS.gene94307:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.2	gene	43049577	43050760	43049577	ID=MS.gene94307
chr6.2	mRNA	43049577	43050760	43049577	ID=MS.gene94307.t1;Parent=MS.gene94307
chr6.2	exon	43049950	43050760	43049950	ID=MS.gene94307.t1.exon1;Parent=MS.gene94307.t1
chr6.2	CDS	43049950	43050760	43049950	ID=cds.MS.gene94307.t1;Parent=MS.gene94307.t1
chr6.2	exon	43049577	43049848	43049577	ID=MS.gene94307.t1.exon2;Parent=MS.gene94307.t1
chr6.2	CDS	43049577	43049848	43049577	ID=cds.MS.gene94307.t1;Parent=MS.gene94307.t1

Gene Sequence

>MS.gene94307

ATGGTTCCGGAAGTCCCATTACCAGAACGCAAAACCTCTAGCGACGCCAACTTAATCCTTGCCACTCAAGATGGTTCTCATGGGATTCCATTCACGAATGCGAAATCCGTAACATTCCCGAATCTTCCAAGAACCCTAGGGTTTTACAAATACTACAGAAACTCTATCGTCAAGTTTTTCAGATTCAATCCCAACAGAAAAATCACCTTCACCGATGTTCGCAAAACCCTAGTCGGTGACGTTGGTTCTATTGGAAGAATCTTTGATTTTCTTGAAGCTTGGGGTTTGATCAATTATCATAATCCTTCTTCTTTGCTCGGTAAACCCGATGCAGAGTCAAATTCTACGGAATCTCCTTCTCTGGTGCCTGCCAATGAAGCTAAGAGAATCTGCAGTGGCTGCATGGCTTGCTTTGCCTGTGATAAGAATAATATGACGTTGTGTGCGAGGTGTTTTATTCGTGGAAACTATCGAATTGGTATGGAGATAAGTGAGGAGACAAAAAATGAATGGACTGAGGAGGAAACACTGAATCTTCTTGAAGCTATTACAAATTTCGGGGATGATTGGAAGAGAGTTGCTCATCAAGTTGTTGTTAGGACCGACAAGGAATGTGTTGCTCGTTTTCTAGAGCTTCCTTTTGGCGATCAGTTGAAGCCTCCCGCTGATGCTGAATGTGAATCAGAAACTGTTGCGTCGGGTAAATCTAGTAAGAGAATGTGTCTCACACCTCTTATGGATGCTAGAAATCCTACCATGGCTCAGGCTGCTTTCCTTTCTGCTTTGGCAGGGACGGAGGTTGCTCTGACAAGTTTGTGCAATGCTTACAAATCAACTAGAATTAATTACCAATTATTTCCAAGGAATACATTGCAGCAAGATGCTTTGCATTCAATGGTGGTAATGCTTCAGATTCTATTCAAGGATCTCTATTACGTGCAAATTTAAAGCTTGAGAAGGAAGAATCAGACGTGGAAAAAGCTATTTCTGAGGTTATAGAAGTTCAGATGAAAATAATCCAGGACAAGCTTATCAATTTTGAGGATTTAGACGTGCTGATGGAAAAAGAACGCCAGCAGTTGGAGCAAACGAAGAGTTTGTTTTTCCTTGATCAGCTTAATCTTTTATTTCGTAAAACATCTGCACCAACGACCGGAGAAGGCAATCATGTAAAAAGTAATTGA

Protein sequence

>MS.gene94307.t1

MVPEVPLPERKTSSDANLILATQDGSHGIPFTNAKSVTFPNLPRTLGFYKYYRNSIVKFFRFNPNRKITFTDVRKTLVGDVGSIGRIFDFLEAWGLINYHNPSSLLGKPDAESNSTESPSLVPANEAKRICSGCMACFACDKNNMTLCARCFIRGNYRIGMEISEETKNEWTEEETLNLLEAITNFGDDWKRVAHQVVVRTDKECVARFLELPFGDQLKPPADAECESETVASGKSSKRMCLTPLMDARNPTMAQAAFLSALAGTEVALTNSIQGSLLRANLKLEKEESDVEKAISEVIEVQMKIIQDKLINFEDLDVLMEKERQQLEQTKSLFFLDQLNLLFRKTSAPTTGEGNHVKSN