Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007699.t1 | XP_013455979.1 | 99.8 | 587 | 1 | 0 | 1 | 587 | 1 | 587 | 8.3e-309 | 1068.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007699.t1 | P08926 | 95.4 | 587 | 27 | 0 | 1 | 587 | 1 | 587 | 3.0e-299 | 1028.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007699.t1 | I3SKN7 | 99.8 | 587 | 1 | 0 | 1 | 587 | 1 | 587 | 5.9e-309 | 1068.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007699 | MS.gene37341 | PPI |
| MS.gene007699 | MS.gene24508 | PPI |
| MS.gene007699 | MS.gene00537 | PPI |
| MS.gene78778 | MS.gene007699 | PPI |
| MS.gene007699 | MS.gene00538 | PPI |
| MS.gene051663 | MS.gene007699 | PPI |
| MS.gene007699 | MS.gene21583 | PPI |
| MS.gene007699 | MS.gene07775 | PPI |
| MS.gene007699 | MS.gene051662 | PPI |
| MS.gene007699 | MS.gene21581 | PPI |
| MS.gene005697 | MS.gene007699 | PPI |
| MS.gene007699 | MS.gene006906 | PPI |
| MS.gene007699 | MS.gene071148 | PPI |
| MS.gene007699 | MS.gene051663 | PPI |
| MS.gene007699 | MS.gene66498 | PPI |
| MS.gene007699 | MS.gene067554 | PPI |
| MS.gene007699 | MS.gene053971 | PPI |
| MS.gene66498 | MS.gene007699 | PPI |
| MS.gene007699 | MS.gene66497 | PPI |
| MS.gene007699 | MS.gene045864 | PPI |
| MS.gene007699 | MS.gene21357 | PPI |
| MS.gene007699 | MS.gene005698 | PPI |
| MS.gene007699 | MS.gene24509 | PPI |
| MS.gene007699 | MS.gene011205 | PPI |
| MS.gene007699 | MS.gene21355 | PPI |
| MS.gene007699 | MS.gene56417 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007699.t1 | MTR_4g057970 | 99.830 | 587 | 1 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1156 |
| MS.gene007699.t1 | MTR_4g084130 | 64.991 | 537 | 185 | 1 | 42 | 575 | 34 | 570 | 0.0 | 702 |
| MS.gene007699.t1 | MTR_4g084130 | 64.989 | 457 | 157 | 1 | 122 | 575 | 2 | 458 | 0.0 | 597 |
| MS.gene007699.t1 | MTR_1g017380 | 52.952 | 542 | 250 | 4 | 45 | 582 | 43 | 583 | 0.0 | 541 |
| MS.gene007699.t1 | MTR_1g017390 | 52.768 | 542 | 251 | 4 | 45 | 582 | 43 | 583 | 0.0 | 540 |
| MS.gene007699.t1 | MTR_1g090140 | 45.341 | 558 | 293 | 5 | 28 | 582 | 19 | 567 | 2.09e-159 | 468 |
| MS.gene007699.t1 | MTR_1g090130 | 45.422 | 557 | 293 | 5 | 22 | 572 | 6 | 557 | 3.86e-156 | 460 |
| MS.gene007699.t1 | MTR_8g017080 | 42.938 | 531 | 295 | 4 | 50 | 574 | 36 | 564 | 2.61e-141 | 422 |
| MS.gene007699.t1 | MTR_0991s0010 | 54.545 | 143 | 62 | 2 | 45 | 184 | 43 | 185 | 4.28e-43 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007699.t1 | AT2G28000 | 85.971 | 556 | 77 | 1 | 33 | 587 | 31 | 586 | 0.0 | 934 |
| MS.gene007699.t1 | AT5G18820 | 60.420 | 571 | 218 | 4 | 15 | 582 | 5 | 570 | 0.0 | 654 |
| MS.gene007699.t1 | AT5G56500 | 51.269 | 591 | 277 | 7 | 1 | 584 | 1 | 587 | 0.0 | 546 |
| MS.gene007699.t1 | AT5G56500 | 51.269 | 591 | 277 | 7 | 1 | 584 | 1 | 587 | 0.0 | 546 |
| MS.gene007699.t1 | AT5G18820 | 61.339 | 463 | 177 | 2 | 122 | 582 | 2 | 464 | 0.0 | 546 |
| MS.gene007699.t1 | AT1G55490 | 49.578 | 593 | 287 | 6 | 1 | 582 | 1 | 592 | 0.0 | 539 |
| MS.gene007699.t1 | AT1G55490 | 49.578 | 593 | 287 | 6 | 1 | 582 | 1 | 592 | 0.0 | 539 |
| MS.gene007699.t1 | AT1G55490 | 49.578 | 593 | 287 | 6 | 1 | 582 | 1 | 592 | 0.0 | 539 |
| MS.gene007699.t1 | AT1G55490 | 49.578 | 593 | 287 | 6 | 1 | 582 | 1 | 592 | 0.0 | 539 |
| MS.gene007699.t1 | AT1G55490 | 49.578 | 593 | 287 | 6 | 1 | 582 | 1 | 592 | 0.0 | 539 |
| MS.gene007699.t1 | AT3G13470 | 50.903 | 554 | 267 | 4 | 33 | 582 | 36 | 588 | 0.0 | 536 |
| MS.gene007699.t1 | AT1G26230 | 45.167 | 538 | 286 | 5 | 45 | 574 | 36 | 572 | 2.95e-161 | 474 |
| MS.gene007699.t1 | AT5G18820 | 59.806 | 413 | 160 | 2 | 15 | 426 | 5 | 412 | 3.04e-159 | 463 |
| MS.gene007699.t1 | AT1G26230 | 45.472 | 519 | 276 | 4 | 62 | 574 | 3 | 520 | 7.66e-157 | 461 |
| MS.gene007699.t1 | AT3G23990 | 44.523 | 566 | 301 | 6 | 12 | 573 | 1 | 557 | 4.39e-155 | 457 |
| MS.gene007699.t1 | AT1G26230 | 45.508 | 512 | 272 | 4 | 69 | 574 | 2 | 512 | 6.32e-155 | 456 |
| MS.gene007699.t1 | AT2G33210 | 43.772 | 578 | 300 | 5 | 4 | 577 | 6 | 562 | 9.95e-155 | 456 |
| MS.gene007699.t1 | AT2G33210 | 43.772 | 578 | 295 | 6 | 4 | 577 | 6 | 557 | 6.07e-152 | 449 |
| MS.gene007699.t1 | AT3G13860 | 43.916 | 526 | 291 | 3 | 48 | 571 | 32 | 555 | 1.60e-141 | 422 |
| MS.gene007699.t1 | AT1G26230 | 45.053 | 475 | 257 | 3 | 45 | 516 | 36 | 509 | 2.24e-141 | 421 |
| MS.gene007699.t1 | AT1G26230 | 44.226 | 407 | 223 | 3 | 45 | 448 | 36 | 441 | 3.23e-117 | 356 |
Find 167 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAAGATTTGTAACAAAT+TGG | 0.150058 | 4.3:-43025970 | None:intergenic |
| GGCAGCAAAAGTTGCATTCT+TGG | 0.207810 | 4.3:-43026863 | None:intergenic |
| GACTACAACGGCTTCGATTT+TGG | 0.214195 | 4.3:+43025426 | MS.gene007699:CDS |
| ATGCTGGTGCAGCTCTAATT+AGG | 0.223973 | 4.3:+43025221 | MS.gene007699:CDS |
| GGCAGCAGCCACAGCTGCCC+TGG | 0.235751 | 4.3:-43027744 | None:intergenic |
| GAGTTCCAGGCCAGTGATTT+GGG | 0.275875 | 4.3:+43026562 | MS.gene007699:CDS |
| CTCAAGATTTGTAACAAATT+GGG | 0.277700 | 4.3:-43025969 | None:intergenic |
| TGAGTTCCAGGCCAGTGATT+TGG | 0.282182 | 4.3:+43026561 | MS.gene007699:CDS |
| CAGAATGCTGCTTCAGTGGC+TGG | 0.296833 | 4.3:+43027677 | MS.gene007699:CDS |
| ACTGCTAGGTGCTGAGTTCC+AGG | 0.304928 | 4.3:+43026549 | MS.gene007699:intron |
| ATATCATCTCCACCTTTAAC+AGG | 0.315746 | 4.3:-43025571 | None:intergenic |
| TTCAATTGAACAACTTGGTT+TGG | 0.329096 | 4.3:+43026603 | MS.gene007699:CDS |
| CTTTGATGGCAGCCACATTA+AGG | 0.329763 | 4.3:-43026174 | None:intergenic |
| AAAGGTGGAGATGATATAAA+AGG | 0.339200 | 4.3:+43025577 | MS.gene007699:CDS |
| AGTTTACGACTCGGAGAAAC+TGG | 0.348292 | 4.3:+43026741 | MS.gene007699:CDS |
| TATGAGAATTTAATTGAGTC+TGG | 0.349270 | 4.3:+43027617 | MS.gene007699:CDS |
| GCCATCAAAGCTCCAGGATT+TGG | 0.350317 | 4.3:+43026187 | MS.gene007699:CDS |
| TGATAAAACAGTAGCGGCTT+TGG | 0.352770 | 4.3:+43025522 | MS.gene007699:CDS |
| AAGTTGGCTAGGCCTGTTAA+AGG | 0.361241 | 4.3:+43025559 | MS.gene007699:CDS |
| GCCACAGCTGCCCTGGGCTT+AGG | 0.362312 | 4.3:-43027737 | None:intergenic |
| TGAAGGGAGGAATGTTGTTT+TGG | 0.363805 | 4.3:+43025120 | MS.gene007699:intron |
| GCAGCAGCCACAGCTGCCCT+GGG | 0.364316 | 4.3:-43027743 | None:intergenic |
| ACCAAATCCTGGAGCTTTGA+TGG | 0.365679 | 4.3:-43026188 | None:intergenic |
| ATTGAGGAAGGTATTGTTCC+TGG | 0.376386 | 4.3:+43026886 | MS.gene007699:CDS |
| CAAAGGATGAGTTGCAATCC+AGG | 0.386193 | 4.3:+43026680 | MS.gene007699:CDS |
| GAGAGGATTGCTAAATTATC+TGG | 0.395315 | 4.3:+43026766 | MS.gene007699:CDS |
| AGATATCACTGGTGAGGCTT+TGG | 0.395603 | 4.3:+43026120 | MS.gene007699:CDS |
| AAACGAGGAGGAAGACTCTA+TGG | 0.398802 | 4.3:-43025778 | None:intergenic |
| TTTCTTCTCTCACCAAATCC+TGG | 0.401579 | 4.3:-43026199 | None:intergenic |
| TGATGCAGCATCAGCAATAA+TGG | 0.409954 | 4.3:-43026659 | None:intergenic |
| AGAAGTGGTGAATGGGAGGT+TGG | 0.412726 | 4.3:+43027572 | MS.gene007699:CDS |
| GCTCAAAATGCTGGAATAGA+AGG | 0.412779 | 4.3:+43027527 | MS.gene007699:CDS |
| GCTGTTGCTTCTATTTCTGC+TGG | 0.418816 | 4.3:+43025687 | MS.gene007699:intron |
| CTTAAACGGTAAGGCCTTGT+GGG | 0.430025 | 4.3:-43027766 | None:intergenic |
| TCAATATTGCAATGTCTTGA+AGG | 0.436075 | 4.3:-43026228 | None:intergenic |
| TGCTGGTGCAGCTCTAATTA+GGG | 0.437513 | 4.3:+43025222 | MS.gene007699:CDS |
| GGTGGAAGAGCTTGAGAAGT+TGG | 0.438321 | 4.3:+43025543 | MS.gene007699:CDS |
| GCTGGAAATGATGAGTTGAT+TGG | 0.440283 | 4.3:+43025705 | MS.gene007699:CDS |
| TTTCTTCAGTTGTGCAACCC+TGG | 0.441852 | 4.3:-43026698 | None:intergenic |
| GCTGTGGCTGCTGCCCCACA+AGG | 0.444657 | 4.3:+43027752 | MS.gene007699:CDS |
| AACAAGAAGGCCCAAATCAC+TGG | 0.445601 | 4.3:-43026572 | None:intergenic |
| TACCTCGGGGTCCGAGAGTA+AGG | 0.449271 | 4.3:-43024466 | None:intergenic |
| GCATAGCACGGCGTGAATCT+TGG | 0.451358 | 4.3:-43024409 | None:intergenic |
| AGAACGGAGAATTGAGGTTG+AGG | 0.455957 | 4.3:-43024168 | None:intergenic |
| GGACTTCTCAGTGTGACATC+AGG | 0.457635 | 4.3:+43025469 | MS.gene007699:CDS |
| GAAAATTAGAAGTGGTGAAT+GGG | 0.459259 | 4.3:+43027565 | MS.gene007699:CDS |
| GCTGAAGCAATTGGCAAGGT+TGG | 0.460825 | 4.3:+43025738 | MS.gene007699:CDS |
| GGATGAGTTTGGCAGTCCTA+AGG | 0.461802 | 4.3:+43025141 | MS.gene007699:CDS |
| AAAAGATATAATTCCTCTGT+TGG | 0.463003 | 4.3:+43026054 | MS.gene007699:CDS |
| TGCTTATGTTCCAGCAATCA+AGG | 0.463871 | 4.3:+43026936 | MS.gene007699:CDS |
| TAATTAATCTAAAACTTAAA+CGG | 0.464303 | 4.3:-43027780 | None:intergenic |
| AGATTCACGCCGTGCTATGC+AGG | 0.464712 | 4.3:+43024412 | MS.gene007699:CDS |
| CATTCCTTCTTCGACTTCGA+CGG | 0.464884 | 4.3:-43025808 | None:intergenic |
| ACACCATCGTTTACAACCTT+AGG | 0.465120 | 4.3:-43025157 | None:intergenic |
| GCTCGGGAAATCATTAAGCT+TGG | 0.465886 | 4.3:+43025448 | MS.gene007699:CDS |
| GCACACCTTGTTACCTTCGC+AGG | 0.466595 | 4.3:-43027650 | None:intergenic |
| TGCTGCTTCAGTGGCTGGGA+TGG | 0.468314 | 4.3:+43027682 | MS.gene007699:CDS |
| GCCTAAGCCCAGGGCAGCTG+TGG | 0.469153 | 4.3:+43027736 | MS.gene007699:CDS |
| TCAAGATTTGTAACAAATTG+GGG | 0.473091 | 4.3:-43025968 | None:intergenic |
| AGAAAATTAGAAGTGGTGAA+TGG | 0.475205 | 4.3:+43027564 | MS.gene007699:CDS |
| CAAGACATTGCAATATTGAC+AGG | 0.482708 | 4.3:+43026232 | MS.gene007699:CDS |
| AAGTTTACGATCCTCAAGTT+CGG | 0.483262 | 4.3:-43026827 | None:intergenic |
| AATAATGGTGGTAGAATCCT+TGG | 0.484524 | 4.3:-43026644 | None:intergenic |
| GATGCTGTTGGCCTTACTCT+CGG | 0.491933 | 4.3:+43024455 | MS.gene007699:CDS |
| TCACGCCGTGCTATGCAGGC+TGG | 0.498346 | 4.3:+43024416 | MS.gene007699:CDS |
| TAAAACAGTAGCGGCTTTGG+TGG | 0.499019 | 4.3:+43025525 | MS.gene007699:CDS |
| GAAGGCCCAAATCACTGGCC+TGG | 0.503715 | 4.3:-43026567 | None:intergenic |
| AATAGAAGGTGAAGTAGTTG+TGG | 0.504535 | 4.3:+43027541 | MS.gene007699:CDS |
| TGTAATTAACCCTCCCATGT+TGG | 0.504603 | 4.3:-43024331 | None:intergenic |
| TGGTTAGTTACCTGGTTGGT+AGG | 0.506460 | 4.3:-43024191 | None:intergenic |
| AGGAGCTGACATCGTTCAAA+AGG | 0.507340 | 4.3:+43026987 | MS.gene007699:CDS |
| TTGAAGTGCTTTCAACAAGA+AGG | 0.508700 | 4.3:-43026585 | None:intergenic |
| ACTAATGACTCAGCTGGAGA+TGG | 0.509296 | 4.3:+43025403 | MS.gene007699:CDS |
| AGCACTTCAATTGAACAACT+TGG | 0.512887 | 4.3:+43026598 | MS.gene007699:CDS |
| TCATTGATTGCTCAAAATGC+TGG | 0.518366 | 4.3:+43027518 | MS.gene007699:CDS |
| TCTATGGATAAAACACCATC+AGG | 0.519843 | 4.3:-43025762 | None:intergenic |
| AGAATGCTGCTTCAGTGGCT+GGG | 0.520388 | 4.3:+43027678 | MS.gene007699:CDS |
| ACAACCGTCGAAGTCGAAGA+AGG | 0.524172 | 4.3:+43025804 | MS.gene007699:CDS |
| CACTTGCTTTAACCACAAAA+CGG | 0.526937 | 4.3:-43024367 | None:intergenic |
| CTTCGGCAATGATAAGCAAA+GGG | 0.527412 | 4.3:-43026099 | None:intergenic |
| TATTGAGTTACCTGATGCTA+TGG | 0.527504 | 4.3:+43025195 | MS.gene007699:CDS |
| TCTGCAGAATGCTGCTTCAG+TGG | 0.527899 | 4.3:+43027673 | MS.gene007699:CDS |
| AGCCTCACCAGTGATATCTT+CGG | 0.529074 | 4.3:-43026116 | None:intergenic |
| AATCTAAAACTTAAACGGTA+AGG | 0.533828 | 4.3:-43027775 | None:intergenic |
| AATCCTGTGTCAATCAAGAA+AGG | 0.534087 | 4.3:+43025496 | MS.gene007699:CDS |
| AGCAGAAAGGCGAACCAACA+TGG | 0.534199 | 4.3:+43024317 | MS.gene007699:CDS |
| AGTAAAACTAATGACTCAGC+TGG | 0.535745 | 4.3:+43025397 | MS.gene007699:CDS |
| GGATCGTAAACTTAGAATTG+AGG | 0.536649 | 4.3:+43026837 | MS.gene007699:CDS |
| GGTAGGAGAACGGAGAATTG+AGG | 0.536812 | 4.3:-43024174 | None:intergenic |
| GTGGCTGCCATCAAAGCTCC+AGG | 0.538427 | 4.3:+43026181 | MS.gene007699:CDS |
| TGGTGGAGTGGCAGTCATCA+AGG | 0.542101 | 4.3:+43026786 | MS.gene007699:CDS |
| ATTCCTTTCTTGATTGACAC+AGG | 0.542961 | 4.3:-43025499 | None:intergenic |
| GAGAGTAAGGCCAACAGCAT+CGG | 0.544516 | 4.3:-43024453 | None:intergenic |
| ACAATGATTGCTGAAGCAAT+TGG | 0.546352 | 4.3:+43025729 | MS.gene007699:CDS |
| TGAGGTTGAGGATAGAGCGT+TGG | 0.551901 | 4.3:-43024156 | None:intergenic |
| ACTTAAACGGTAAGGCCTTG+TGG | 0.553935 | 4.3:-43027767 | None:intergenic |
| GAAGGTATTGTTCCTGGCGG+AGG | 0.554238 | 4.3:+43026892 | MS.gene007699:CDS |
| TTGTTGAAAAGCCTAAGCCC+AGG | 0.555169 | 4.3:+43027726 | MS.gene007699:CDS |
| TCCTGGCGGAGGTACAGCAT+TGG | 0.556861 | 4.3:+43026903 | MS.gene007699:CDS |
| CGTCGAAGTCGAAGAAGGAA+TGG | 0.560458 | 4.3:+43025809 | MS.gene007699:CDS |
| GATAAACTTGCCGATGCTGT+TGG | 0.563462 | 4.3:+43024443 | MS.gene007699:CDS |
| CAATTCCAGCCTGCATAGCA+CGG | 0.564119 | 4.3:-43024421 | None:intergenic |
| AGGAACAATACCTTCCTCAA+TGG | 0.564642 | 4.3:-43026884 | None:intergenic |
| AGGATTTGGTGAGAGAAGAA+AGG | 0.566687 | 4.3:+43026201 | MS.gene007699:CDS |
| CTAATGACTCAGCTGGAGAT+GGG | 0.568805 | 4.3:+43025404 | MS.gene007699:CDS |
| GACAGACTCAGTTTACGACT+CGG | 0.569507 | 4.3:+43026732 | MS.gene007699:CDS |
| ACCAATGCTGTACCTCCGCC+AGG | 0.569522 | 4.3:-43026904 | None:intergenic |
| AACTAGAAGACGCAGATGAG+AGG | 0.576895 | 4.3:+43026962 | MS.gene007699:CDS |
| GCAGAAAGGCGAACCAACAT+GGG | 0.577197 | 4.3:+43024318 | MS.gene007699:CDS |
| TGCTAAATTATCTGGTGGAG+TGG | 0.578652 | 4.3:+43026774 | MS.gene007699:CDS |
| TATTGCTGATGCTGCATCAA+AGG | 0.580565 | 4.3:+43026663 | MS.gene007699:CDS |
| ATTGGCAAGGTTGGACCTGA+TGG | 0.586040 | 4.3:+43025747 | MS.gene007699:CDS |
| CACGCAGCTTGTTCACAACA+AGG | 0.586245 | 4.3:-43026147 | None:intergenic |
| TCGACCCTGCGAAGGTAACA+AGG | 0.586880 | 4.3:+43027645 | MS.gene007699:CDS |
| ATCATTGCCGAAGATATCAC+TGG | 0.598076 | 4.3:+43026109 | MS.gene007699:CDS |
| TCTTCGGCAATGATAAGCAA+AGG | 0.598336 | 4.3:-43026100 | None:intergenic |
| CCTGATGCTATGGAAAATGC+TGG | 0.601164 | 4.3:+43025205 | MS.gene007699:CDS |
| ATGACTTGTAGATTGACAGA+GGG | 0.604162 | 4.3:+43025936 | MS.gene007699:intron |
| GGTGGTAGAATCCTTGGAGA+TGG | 0.604265 | 4.3:-43026638 | None:intergenic |
| TGCTACAGAGACCGAACTTG+AGG | 0.605909 | 4.3:+43026816 | MS.gene007699:CDS |
| GAAATGGTTAGTTACCTGGT+TGG | 0.606997 | 4.3:-43024195 | None:intergenic |
| GTTGTGGAGAAAATTAGAAG+TGG | 0.607273 | 4.3:+43027557 | MS.gene007699:CDS |
| ACGGCGTGAATCTTGGTCAA+AGG | 0.607568 | 4.3:-43024402 | None:intergenic |
| CACACCTTGTTACCTTCGCA+GGG | 0.607881 | 4.3:-43027649 | None:intergenic |
| AAGAGCTTGAGAAGTTGGCT+AGG | 0.608935 | 4.3:+43025548 | MS.gene007699:CDS |
| TATTGCAATGTCTTGAAGGA+GGG | 0.612191 | 4.3:-43026224 | None:intergenic |
| GAAGACGCAGATGAGAGGCT+AGG | 0.612286 | 4.3:+43026967 | MS.gene007699:CDS |
| CAAGATTTGTAACAAATTGG+GGG | 0.614790 | 4.3:-43025967 | None:intergenic |
| TTGGCTAGGCCTGTTAAAGG+TGG | 0.615079 | 4.3:+43025562 | MS.gene007699:CDS |
| TCTCCGTTCTCCTACCAACC+AGG | 0.616314 | 4.3:+43024181 | MS.gene007699:CDS |
| AGGATTGCTAAATTATCTGG+TGG | 0.617517 | 4.3:+43026769 | MS.gene007699:CDS |
| AAAGGATGAGTTGCAATCCA+GGG | 0.618406 | 4.3:+43026681 | MS.gene007699:CDS |
| TTACCTGGTTGGTAGGAGAA+CGG | 0.618698 | 4.3:-43024184 | None:intergenic |
| AATTAGAAGTGGTGAATGGG+AGG | 0.619643 | 4.3:+43027568 | MS.gene007699:CDS |
| TGGAGTCATCGACCCTGCGA+AGG | 0.619723 | 4.3:+43027637 | MS.gene007699:CDS |
| CAAAGGGGCTCTCAATTGAG+TGG | 0.620297 | 4.3:-43026083 | None:intergenic |
| TTCAACAACAATGGCCTGTG+TGG | 0.620761 | 4.3:-43027711 | None:intergenic |
| ATTCTCATAAGTGTCTGTCA+TGG | 0.622423 | 4.3:-43027603 | None:intergenic |
| ACAAACGAGTTTAAGCAGAA+AGG | 0.624273 | 4.3:+43024304 | MS.gene007699:CDS |
| TGTTGAAAAGCCTAAGCCCA+GGG | 0.625995 | 4.3:+43027727 | MS.gene007699:CDS |
| AGATAATTTAGCAATCCTCT+CGG | 0.626680 | 4.3:-43026764 | None:intergenic |
| AAGATTTGTAACAAATTGGG+GGG | 0.629058 | 4.3:-43025966 | None:intergenic |
| GAAAGGCGAACCAACATGGG+AGG | 0.631849 | 4.3:+43024321 | MS.gene007699:CDS |
| ATATTGCAATGTCTTGAAGG+AGG | 0.635052 | 4.3:-43026225 | None:intergenic |
| GGAGTGGCAGTCATCAAGGT+CGG | 0.637367 | 4.3:+43026790 | MS.gene007699:CDS |
| TGCCGAAGATATCACTGGTG+AGG | 0.639474 | 4.3:+43026114 | MS.gene007699:CDS |
| TCGAAAAGTGACCATCTCCA+AGG | 0.643733 | 4.3:+43026627 | MS.gene007699:CDS |
| TATGACTTGTAGATTGACAG+AGG | 0.649175 | 4.3:+43025935 | MS.gene007699:intron |
| GGCCTTACTCTCGGACCCCG+AGG | 0.649612 | 4.3:+43024464 | MS.gene007699:CDS |
| ACTCGGAGAAACTGGCCGAG+AGG | 0.649780 | 4.3:+43026749 | MS.gene007699:CDS |
| AGGAATTGATAAAACAGTAG+CGG | 0.654535 | 4.3:+43025516 | MS.gene007699:CDS |
| AAAGGCGAACCAACATGGGA+GGG | 0.655547 | 4.3:+43024322 | MS.gene007699:CDS |
| GATTGCTGAAGCAATTGGCA+AGG | 0.668567 | 4.3:+43025734 | MS.gene007699:CDS |
| AGTCCTAAGGTTGTAAACGA+TGG | 0.671771 | 4.3:+43025154 | MS.gene007699:CDS |
| GCTGCGTGGTATCCTTAATG+TGG | 0.674392 | 4.3:+43026162 | MS.gene007699:CDS |
| TTAAACGGTAAGGCCTTGTG+GGG | 0.676362 | 4.3:-43027765 | None:intergenic |
| GACGGTTGTCTCAAACGAGG+AGG | 0.683850 | 4.3:-43025790 | None:intergenic |
| CGAAGTCGAAGAAGGAATGG+AGG | 0.684643 | 4.3:+43025812 | MS.gene007699:CDS |
| AGCTGGAGATGGGACTACAA+CGG | 0.691077 | 4.3:+43025414 | MS.gene007699:CDS |
| TGCAGCATCAGCAATAATGG+TGG | 0.697793 | 4.3:-43026656 | None:intergenic |
| TGGTGCAGCTCTAATTAGGG+AGG | 0.702507 | 4.3:+43025225 | MS.gene007699:CDS |
| ACGCAGCTTGTTCACAACAA+GGG | 0.703024 | 4.3:-43026146 | None:intergenic |
| TGGGATGGTCTTGACCACAC+AGG | 0.718657 | 4.3:+43027697 | MS.gene007699:CDS |
| GAGGAAGGTATTGTTCCTGG+CGG | 0.718906 | 4.3:+43026889 | MS.gene007699:CDS |
| TTCGGCAATGATAAGCAAAG+GGG | 0.721019 | 4.3:-43026098 | None:intergenic |
| CTTGTTGTGAACAAGCTGCG+TGG | 0.747846 | 4.3:+43026148 | MS.gene007699:CDS |
| TTCGACGGTTGTCTCAAACG+AGG | 0.759858 | 4.3:-43025793 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTTTTTTTTTTTTTGA+AGG | + | chr4.3:43025103-43025122 | MS.gene007699:intron | 10.0% |
| !! | AATTAAATGAAAATGAATGA+AGG | - | chr4.3:43024222-43024241 | None:intergenic | 15.0% |
| !! | ATTAAATGAAAATGAATGAA+GGG | - | chr4.3:43024221-43024240 | None:intergenic | 15.0% |
| !! | TGTTTAATCATGTTAAATAA+TGG | + | chr4.3:43026349-43026368 | MS.gene007699:intron | 15.0% |
| !!! | AAATAATATCAACATTTTCA+GGG | + | chr4.3:43027129-43027148 | MS.gene007699:intron | 15.0% |
| !!! | ATAAATCTGAATGTATTTTT+CGG | + | chr4.3:43024661-43024680 | MS.gene007699:intron | 15.0% |
| !!! | GTTGTTTTTATAAACTATAT+TGG | + | chr4.3:43024803-43024822 | MS.gene007699:intron | 15.0% |
| !!! | TAATATTGTTGCTATTATAT+GGG | + | chr4.3:43025062-43025081 | MS.gene007699:intron | 15.0% |
| !!! | TATATGTATTCATTGTTTTT+TGG | + | chr4.3:43026266-43026285 | MS.gene007699:intron | 15.0% |
| !!! | TATTCTTTTTTTGTTTGAAT+CGG | + | chr4.3:43025323-43025342 | MS.gene007699:intron | 15.0% |
| !!! | TTAATATTGTTGCTATTATA+TGG | + | chr4.3:43025061-43025080 | MS.gene007699:intron | 15.0% |
| !! | AAAAAGGGATGAAAAATAAA+TGG | - | chr4.3:43027385-43027404 | None:intergenic | 20.0% |
| !! | GCTTGAAACATTAATTTATA+AGG | - | chr4.3:43027167-43027186 | None:intergenic | 20.0% |
| !! | TACATTTCAAAAAGATACAT+GGG | - | chr4.3:43024946-43024965 | None:intergenic | 20.0% |
| !! | TACTATAAGAACATTTGATT+TGG | + | chr4.3:43025609-43025628 | MS.gene007699:intron | 20.0% |
| !! | TTAAATGAAAATGAATGAAG+GGG | - | chr4.3:43024220-43024239 | None:intergenic | 20.0% |
| !! | TTGAATGTAATTATATGTGT+TGG | + | chr4.3:43024506-43024525 | MS.gene007699:intron | 20.0% |
| !!! | AGGAATTATATCTTTTATTG+CGG | - | chr4.3:43026050-43026069 | None:intergenic | 20.0% |
| !!! | ATATTTGATGAAGTTTTGAT+TGG | - | chr4.3:43027416-43027435 | None:intergenic | 20.0% |
| !!! | CAAATAATATCAACATTTTC+AGG | + | chr4.3:43027128-43027147 | MS.gene007699:intron | 20.0% |
| !!! | CATAAACTAAATTTTTGAAC+AGG | - | chr4.3:43026380-43026399 | None:intergenic | 20.0% |
| !!! | TATTTGATGAAGTTTTGATT+GGG | - | chr4.3:43027415-43027434 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTTGAAGGG+AGG | + | chr4.3:43025107-43025126 | MS.gene007699:intron | 20.0% |
| ! | AAAAGATATAATTCCTCTGT+TGG | + | chr4.3:43026054-43026073 | MS.gene007699:CDS | 25.0% |
| ! | AAAAGCAATAGAAATAGAAG+TGG | - | chr4.3:43025916-43025935 | None:intergenic | 25.0% |
| ! | AAACAATAATCATAGCATAC+TGG | - | chr4.3:43027046-43027065 | None:intergenic | 25.0% |
| ! | ACTCAAATTATCATATACCT+CGG | - | chr4.3:43024484-43024503 | None:intergenic | 25.0% |
| ! | ATAAGCTCAAATAAGCTAAA+TGG | + | chr4.3:43024914-43024933 | MS.gene007699:intron | 25.0% |
| ! | CAGATTGTAAATTGTAATCA+TGG | - | chr4.3:43027081-43027100 | None:intergenic | 25.0% |
| ! | CTCAAGATTTGTAACAAATT+GGG | - | chr4.3:43025972-43025991 | None:intergenic | 25.0% |
| ! | GTACATTTCAAAAAGATACA+TGG | - | chr4.3:43024947-43024966 | None:intergenic | 25.0% |
| ! | GTTGATATTATTTGTGCTTA+CGG | - | chr4.3:43027122-43027141 | None:intergenic | 25.0% |
| ! | TATGAGAATTTAATTGAGTC+TGG | + | chr4.3:43027617-43027636 | MS.gene007699:CDS | 25.0% |
| ! | TCAAGATTTGTAACAAATTG+GGG | - | chr4.3:43025971-43025990 | None:intergenic | 25.0% |
| ! | TCTCAAGATTTGTAACAAAT+TGG | - | chr4.3:43025973-43025992 | None:intergenic | 25.0% |
| ! | TGATTGGGGAAAAATAAAAA+GGG | - | chr4.3:43027400-43027419 | None:intergenic | 25.0% |
| ! | TTCCAATTATAAACATTCAC+CGG | - | chr4.3:43025874-43025893 | None:intergenic | 25.0% |
| ! | TTGATATTATTTGTGCTTAC+GGG | - | chr4.3:43027121-43027140 | None:intergenic | 25.0% |
| ! | TTGATTGGGGAAAAATAAAA+AGG | - | chr4.3:43027401-43027420 | None:intergenic | 25.0% |
| !! | AATTTTCGATTATCTGTTTC+AGG | + | chr4.3:43024280-43024299 | MS.gene007699:intron | 25.0% |
| !! | ATTTTGTAGTTAAGTGCTTT+TGG | - | chr4.3:43024249-43024268 | None:intergenic | 25.0% |
| !! | TATCAAGTATCAACATTTTC+AGG | + | chr4.3:43027217-43027236 | MS.gene007699:intron | 25.0% |
| !! | TTTGAAGATTTTTGTGTACA+TGG | + | chr4.3:43025292-43025311 | MS.gene007699:intron | 25.0% |
| !! | TTTTCCTTTTGTCTATGTAT+AGG | + | chr4.3:43027478-43027497 | MS.gene007699:intron | 25.0% |
| !! | TTTTGTAGTTAAGTGCTTTT+GGG | - | chr4.3:43024248-43024267 | None:intergenic | 25.0% |
| !!! | AAATGGATTTTCTTGAAAAC+TGG | - | chr4.3:43027368-43027387 | None:intergenic | 25.0% |
| !!! | ATTTGATGAAGTTTTGATTG+GGG | - | chr4.3:43027414-43027433 | None:intergenic | 25.0% |
| !!! | ATTTTTTTAGAAATGTGAGG+TGG | + | chr4.3:43024985-43025004 | MS.gene007699:intron | 25.0% |
| !!! | TGATGTTGATTTAAAACTGA+AGG | + | chr4.3:43025369-43025388 | MS.gene007699:intron | 25.0% |
| !!! | TGGATTTTTTTAGAAATGTG+AGG | + | chr4.3:43024982-43025001 | MS.gene007699:intron | 25.0% |
| !!! | TGTATTTTTCGGATAAAATG+CGG | + | chr4.3:43024672-43024691 | MS.gene007699:intron | 25.0% |
| AAACCTACATTGTACATGAT+TGG | - | chr4.3:43026325-43026344 | None:intergenic | 30.0% | |
| AAAGGTGGAGATGATATAAA+AGG | + | chr4.3:43025577-43025596 | MS.gene007699:CDS | 30.0% | |
| AAGATTTGTAACAAATTGGG+GGG | - | chr4.3:43025969-43025988 | None:intergenic | 30.0% | |
| AATGCCTATACATAGACAAA+AGG | - | chr4.3:43027485-43027504 | None:intergenic | 30.0% | |
| AGAAAATTAGAAGTGGTGAA+TGG | + | chr4.3:43027564-43027583 | MS.gene007699:CDS | 30.0% | |
| AGATAATTTAGCAATCCTCT+CGG | - | chr4.3:43026767-43026786 | None:intergenic | 30.0% | |
| AGGAATTGATAAAACAGTAG+CGG | + | chr4.3:43025516-43025535 | MS.gene007699:CDS | 30.0% | |
| CAAACAAGGAAACAGAATAT+GGG | - | chr4.3:43027264-43027283 | None:intergenic | 30.0% | |
| CAAGATTTGTAACAAATTGG+GGG | - | chr4.3:43025970-43025989 | None:intergenic | 30.0% | |
| CTCAAATTATCATATACCTC+GGG | - | chr4.3:43024483-43024502 | None:intergenic | 30.0% | |
| GAAAATTAGAAGTGGTGAAT+GGG | + | chr4.3:43027565-43027584 | MS.gene007699:CDS | 30.0% | |
| TCAAATTATCATATACCTCG+GGG | - | chr4.3:43024482-43024501 | None:intergenic | 30.0% | |
| TCAATATTGCAATGTCTTGA+AGG | - | chr4.3:43026231-43026250 | None:intergenic | 30.0% | |
| TCCAATTATAAACATTCACC+GGG | - | chr4.3:43025873-43025892 | None:intergenic | 30.0% | |
| TGACTTTGGATTTGCATAAA+TGG | + | chr4.3:43024618-43024637 | MS.gene007699:intron | 30.0% | |
| TGATATTATTTGTGCTTACG+GGG | - | chr4.3:43027120-43027139 | None:intergenic | 30.0% | |
| TGTACTTATAGAAACATGTG+TGG | + | chr4.3:43024962-43024981 | MS.gene007699:intron | 30.0% | |
| TTATATGTGTTGTCTCATAC+TGG | + | chr4.3:43024555-43024574 | MS.gene007699:intron | 30.0% | |
| TTCAATTGAACAACTTGGTT+TGG | + | chr4.3:43026603-43026622 | MS.gene007699:CDS | 30.0% | |
| ! | AATAAGCTCTTTTACCAAAC+AGG | - | chr4.3:43024699-43024718 | None:intergenic | 30.0% |
| ! | ATAAGCTCTTTTACCAAACA+GGG | - | chr4.3:43024698-43024717 | None:intergenic | 30.0% |
| ! | ATTTGACATCTTTTCTTTCC+CGG | + | chr4.3:43025852-43025871 | MS.gene007699:intron | 30.0% |
| ! | ATTTTGTGCATTTAACTGCT+AGG | + | chr4.3:43026535-43026554 | MS.gene007699:intron | 30.0% |
| ! | CATATTCTGTTTCCTTGTTT+GGG | + | chr4.3:43027263-43027282 | MS.gene007699:intron | 30.0% |
| ! | CTTTTATTGCGGAAATCTTT+TGG | - | chr4.3:43026039-43026058 | None:intergenic | 30.0% |
| ! | GGAGATGATATAAAAGGTAT+TGG | + | chr4.3:43025583-43025602 | MS.gene007699:intron | 30.0% |
| ! | TTTTGTCTATGTATAGGCAT+TGG | + | chr4.3:43027484-43027503 | MS.gene007699:intron | 30.0% |
| !!! | AATGTTGTTTTGGATGAGTT+TGG | + | chr4.3:43025130-43025149 | MS.gene007699:CDS | 30.0% |
| !!! | TCTTTTTTTGTTTGAATCGG+TGG | + | chr4.3:43025326-43025345 | MS.gene007699:intron | 30.0% |
| AACTTGTGTTTCCTTGTCAT+CGG | - | chr4.3:43026486-43026505 | None:intergenic | 35.0% | |
| AAGTTTACGATCCTCAAGTT+CGG | - | chr4.3:43026830-43026849 | None:intergenic | 35.0% | |
| AATAATGGTGGTAGAATCCT+TGG | - | chr4.3:43026647-43026666 | None:intergenic | 35.0% | |
| AATAGAAGGTGAAGTAGTTG+TGG | + | chr4.3:43027541-43027560 | MS.gene007699:CDS | 35.0% | |
| AATCCTGTGTCAATCAAGAA+AGG | + | chr4.3:43025496-43025515 | MS.gene007699:CDS | 35.0% | |
| ACAAACGAGTTTAAGCAGAA+AGG | + | chr4.3:43024304-43024323 | MS.gene007699:CDS | 35.0% | |
| ACAATGATTGCTGAAGCAAT+TGG | + | chr4.3:43025729-43025748 | MS.gene007699:CDS | 35.0% | |
| ACACTCATAATAGCACAACA+AGG | - | chr4.3:43027320-43027339 | None:intergenic | 35.0% | |
| AGCACTTCAATTGAACAACT+TGG | + | chr4.3:43026598-43026617 | MS.gene007699:CDS | 35.0% | |
| AGGATTGCTAAATTATCTGG+TGG | + | chr4.3:43026769-43026788 | MS.gene007699:CDS | 35.0% | |
| AGTAAAACTAATGACTCAGC+TGG | + | chr4.3:43025397-43025416 | MS.gene007699:CDS | 35.0% | |
| ATATCATCTCCACCTTTAAC+AGG | - | chr4.3:43025574-43025593 | None:intergenic | 35.0% | |
| ATATTGCAATGTCTTGAAGG+AGG | - | chr4.3:43026228-43026247 | None:intergenic | 35.0% | |
| ATTCCTTTCTTGATTGACAC+AGG | - | chr4.3:43025502-43025521 | None:intergenic | 35.0% | |
| ATTCTCATAAGTGTCTGTCA+TGG | - | chr4.3:43027606-43027625 | None:intergenic | 35.0% | |
| CAAGACATTGCAATATTGAC+AGG | + | chr4.3:43026232-43026251 | MS.gene007699:CDS | 35.0% | |
| CACTTGCTTTAACCACAAAA+CGG | - | chr4.3:43024370-43024389 | None:intergenic | 35.0% | |
| CCAAACAAGGAAACAGAATA+TGG | - | chr4.3:43027265-43027284 | None:intergenic | 35.0% | |
| CCATATTCTGTTTCCTTGTT+TGG | + | chr4.3:43027262-43027281 | MS.gene007699:intron | 35.0% | |
| GAAAACATGGAATGTGACTT+TGG | + | chr4.3:43024604-43024623 | MS.gene007699:intron | 35.0% | |
| GAAAATGAATGAAGGGGAAA+TGG | - | chr4.3:43024214-43024233 | None:intergenic | 35.0% | |
| GAGAGGATTGCTAAATTATC+TGG | + | chr4.3:43026766-43026785 | MS.gene007699:CDS | 35.0% | |
| GGATCGTAAACTTAGAATTG+AGG | + | chr4.3:43026837-43026856 | MS.gene007699:CDS | 35.0% | |
| GTTGTGGAGAAAATTAGAAG+TGG | + | chr4.3:43027557-43027576 | MS.gene007699:CDS | 35.0% | |
| TAGCATGACATTACAACAAC+TGG | - | chr4.3:43025646-43025665 | None:intergenic | 35.0% | |
| TATTGAGTTACCTGATGCTA+TGG | + | chr4.3:43025195-43025214 | MS.gene007699:CDS | 35.0% | |
| TATTGCAATGTCTTGAAGGA+GGG | - | chr4.3:43026227-43026246 | None:intergenic | 35.0% | |
| TCCCGGTGAATGTTTATAAT+TGG | + | chr4.3:43025869-43025888 | MS.gene007699:intron | 35.0% | |
| TCTATGGATAAAACACCATC+AGG | - | chr4.3:43025765-43025784 | None:intergenic | 35.0% | |
| TGTCCAATCATGTACAATGT+AGG | + | chr4.3:43026319-43026338 | MS.gene007699:intron | 35.0% | |
| TTCAAGCGTCATATAACTCA+TGG | + | chr4.3:43027180-43027199 | MS.gene007699:intron | 35.0% | |
| ! | ACAGAAAGTTAACCGTTTTG+TGG | + | chr4.3:43024355-43024374 | MS.gene007699:CDS | 35.0% |
| ! | ATCGGTTCTTTGTTGTATCA+TGG | - | chr4.3:43026468-43026487 | None:intergenic | 35.0% |
| ! | ATGACTTGTAGATTGACAGA+GGG | + | chr4.3:43025936-43025955 | MS.gene007699:intron | 35.0% |
| ! | CTTAGGCTTTTCAACAACAA+TGG | - | chr4.3:43027723-43027742 | None:intergenic | 35.0% |
| ! | TATGACTTGTAGATTGACAG+AGG | + | chr4.3:43025935-43025954 | MS.gene007699:intron | 35.0% |
| ! | TATTGCGGAAATCTTTTGGT+CGG | - | chr4.3:43026035-43026054 | None:intergenic | 35.0% |
| ! | TCATTGATTGCTCAAAATGC+TGG | + | chr4.3:43027518-43027537 | MS.gene007699:CDS | 35.0% |
| ! | TTGAAGTGCTTTCAACAAGA+AGG | - | chr4.3:43026588-43026607 | None:intergenic | 35.0% |
| ! | TTGTTTGAATCGGTGGTTTT+TGG | + | chr4.3:43025333-43025352 | MS.gene007699:intron | 35.0% |
| ! | TTTTGAGCAATCAATGATGC+AGG | - | chr4.3:43027515-43027534 | None:intergenic | 35.0% |
| !! | TCAACATTTTCAGGGTATTC+TGG | + | chr4.3:43027137-43027156 | MS.gene007699:intron | 35.0% |
| !!! | TCTAGTTTTTCCTTGATTGC+TGG | - | chr4.3:43026949-43026968 | None:intergenic | 35.0% |
| AAAGGATGAGTTGCAATCCA+GGG | + | chr4.3:43026681-43026700 | MS.gene007699:CDS | 40.0% | |
| AATTAGAAGTGGTGAATGGG+AGG | + | chr4.3:43027568-43027587 | MS.gene007699:CDS | 40.0% | |
| ACAACAAAGAACCGATGACA+AGG | + | chr4.3:43026472-43026491 | MS.gene007699:intron | 40.0% | |
| ACACCATCGTTTACAACCTT+AGG | - | chr4.3:43025160-43025179 | None:intergenic | 40.0% | |
| AGGAACAATACCTTCCTCAA+TGG | - | chr4.3:43026887-43026906 | None:intergenic | 40.0% | |
| AGTCCTAAGGTTGTAAACGA+TGG | + | chr4.3:43025154-43025173 | MS.gene007699:CDS | 40.0% | |
| ATCATTGCCGAAGATATCAC+TGG | + | chr4.3:43026109-43026128 | MS.gene007699:CDS | 40.0% | |
| CTGATGCGTTAGTGAAAACA+TGG | + | chr4.3:43024591-43024610 | MS.gene007699:intron | 40.0% | |
| CTTCGGCAATGATAAGCAAA+GGG | - | chr4.3:43026102-43026121 | None:intergenic | 40.0% | |
| GCTCAAAATGCTGGAATAGA+AGG | + | chr4.3:43027527-43027546 | MS.gene007699:CDS | 40.0% | |
| TATTGCTGATGCTGCATCAA+AGG | + | chr4.3:43026663-43026682 | MS.gene007699:CDS | 40.0% | |
| TCTTCGGCAATGATAAGCAA+AGG | - | chr4.3:43026103-43026122 | None:intergenic | 40.0% | |
| TGACAAGGAAACACAAGTTG+TGG | + | chr4.3:43026487-43026506 | MS.gene007699:intron | 40.0% | |
| TGATAAAACAGTAGCGGCTT+TGG | + | chr4.3:43025522-43025541 | MS.gene007699:CDS | 40.0% | |
| TGATGCAGCATCAGCAATAA+TGG | - | chr4.3:43026662-43026681 | None:intergenic | 40.0% | |
| TGCTAAATTATCTGGTGGAG+TGG | + | chr4.3:43026774-43026793 | MS.gene007699:CDS | 40.0% | |
| TGCTTATGTTCCAGCAATCA+AGG | + | chr4.3:43026936-43026955 | MS.gene007699:CDS | 40.0% | |
| TGTAATTAACCCTCCCATGT+TGG | - | chr4.3:43024334-43024353 | None:intergenic | 40.0% | |
| TTCGGCAATGATAAGCAAAG+GGG | - | chr4.3:43026101-43026120 | None:intergenic | 40.0% | |
| TTTCTTCTCTCACCAAATCC+TGG | - | chr4.3:43026202-43026221 | None:intergenic | 40.0% | |
| ! | CTGTTTCCTTGTTTGGGTAA+GGG | + | chr4.3:43027269-43027288 | MS.gene007699:intron | 40.0% |
| ! | GAAATGGTTAGTTACCTGGT+TGG | - | chr4.3:43024198-43024217 | None:intergenic | 40.0% |
| ! | TCTGTTTCCTTGTTTGGGTA+AGG | + | chr4.3:43027268-43027287 | MS.gene007699:intron | 40.0% |
| ! | TGTTTCCTTGTTTGGGTAAG+GGG | + | chr4.3:43027270-43027289 | MS.gene007699:intron | 40.0% |
| !! | AGGATTTGGTGAGAGAAGAA+AGG | + | chr4.3:43026201-43026220 | MS.gene007699:CDS | 40.0% |
| !! | ATTGAGGAAGGTATTGTTCC+TGG | + | chr4.3:43026886-43026905 | MS.gene007699:CDS | 40.0% |
| !! | GCTGGAAATGATGAGTTGAT+TGG | + | chr4.3:43025705-43025724 | MS.gene007699:CDS | 40.0% |
| !! | TGAAGGGAGGAATGTTGTTT+TGG | + | chr4.3:43025120-43025139 | MS.gene007699:intron | 40.0% |
| AAACGAGGAGGAAGACTCTA+TGG | - | chr4.3:43025781-43025800 | None:intergenic | 45.0% | |
| AACAAGAAGGCCCAAATCAC+TGG | - | chr4.3:43026575-43026594 | None:intergenic | 45.0% | |
| AACTAGAAGACGCAGATGAG+AGG | + | chr4.3:43026962-43026981 | MS.gene007699:CDS | 45.0% | |
| AAGAGCTTGAGAAGTTGGCT+AGG | + | chr4.3:43025548-43025567 | MS.gene007699:CDS | 45.0% | |
| AAGTTGGCTAGGCCTGTTAA+AGG | + | chr4.3:43025559-43025578 | MS.gene007699:CDS | 45.0% | |
| ACTAATGACTCAGCTGGAGA+TGG | + | chr4.3:43025403-43025422 | MS.gene007699:CDS | 45.0% | |
| AGAACGGAGAATTGAGGTTG+AGG | - | chr4.3:43024171-43024190 | None:intergenic | 45.0% | |
| AGATATCACTGGTGAGGCTT+TGG | + | chr4.3:43026120-43026139 | MS.gene007699:CDS | 45.0% | |
| AGCCTCACCAGTGATATCTT+CGG | - | chr4.3:43026119-43026138 | None:intergenic | 45.0% | |
| AGGAGCTGACATCGTTCAAA+AGG | + | chr4.3:43026987-43027006 | MS.gene007699:CDS | 45.0% | |
| CAAAGGATGAGTTGCAATCC+AGG | + | chr4.3:43026680-43026699 | MS.gene007699:CDS | 45.0% | |
| CATTCCTTCTTCGACTTCGA+CGG | - | chr4.3:43025811-43025830 | None:intergenic | 45.0% | |
| CCTGATGCTATGGAAAATGC+TGG | + | chr4.3:43025205-43025224 | MS.gene007699:CDS | 45.0% | |
| CTAATGACTCAGCTGGAGAT+GGG | + | chr4.3:43025404-43025423 | MS.gene007699:CDS | 45.0% | |
| GACAGACTCAGTTTACGACT+CGG | + | chr4.3:43026732-43026751 | MS.gene007699:CDS | 45.0% | |
| GATAAACTTGCCGATGCTGT+TGG | + | chr4.3:43024443-43024462 | MS.gene007699:CDS | 45.0% | |
| GATTGCTGAAGCAATTGGCA+AGG | + | chr4.3:43025734-43025753 | MS.gene007699:CDS | 45.0% | |
| GCTCGGGAAATCATTAAGCT+TGG | + | chr4.3:43025448-43025467 | MS.gene007699:CDS | 45.0% | |
| GGCAGCAAAAGTTGCATTCT+TGG | - | chr4.3:43026866-43026885 | None:intergenic | 45.0% | |
| TCGAAAAGTGACCATCTCCA+AGG | + | chr4.3:43026627-43026646 | MS.gene007699:CDS | 45.0% | |
| TGCAGCATCAGCAATAATGG+TGG | - | chr4.3:43026659-43026678 | None:intergenic | 45.0% | |
| TGTTGAAAAGCCTAAGCCCA+GGG | + | chr4.3:43027727-43027746 | MS.gene007699:CDS | 45.0% | |
| TTCAACAACAATGGCCTGTG+TGG | - | chr4.3:43027714-43027733 | None:intergenic | 45.0% | |
| TTGTTGAAAAGCCTAAGCCC+AGG | + | chr4.3:43027726-43027745 | MS.gene007699:CDS | 45.0% | |
| TTTCTTCAGTTGTGCAACCC+TGG | - | chr4.3:43026701-43026720 | None:intergenic | 45.0% | |
| ! | ACCAAATCCTGGAGCTTTGA+TGG | - | chr4.3:43026191-43026210 | None:intergenic | 45.0% |
| ! | ACGCAGCTTGTTCACAACAA+GGG | - | chr4.3:43026149-43026168 | None:intergenic | 45.0% |
| ! | ACTTTTGCTGCCATTGAGGA+AGG | + | chr4.3:43026874-43026893 | MS.gene007699:CDS | 45.0% |
| ! | AGGGGAAATGGTTAGTTACC+TGG | - | chr4.3:43024202-43024221 | None:intergenic | 45.0% |
| ! | AGTTTACGACTCGGAGAAAC+TGG | + | chr4.3:43026741-43026760 | MS.gene007699:CDS | 45.0% |
| ! | ATGCTGGTGCAGCTCTAATT+AGG | + | chr4.3:43025221-43025240 | MS.gene007699:CDS | 45.0% |
| ! | CCAGCATTTTCCATAGCATC+AGG | - | chr4.3:43025208-43025227 | None:intergenic | 45.0% |
| ! | CTTTGATGGCAGCCACATTA+AGG | - | chr4.3:43026177-43026196 | None:intergenic | 45.0% |
| ! | GACTACAACGGCTTCGATTT+TGG | + | chr4.3:43025426-43025445 | MS.gene007699:CDS | 45.0% |
| ! | TAAAACAGTAGCGGCTTTGG+TGG | + | chr4.3:43025525-43025544 | MS.gene007699:CDS | 45.0% |
| ! | TGAGTGGTTTTCTCCAACAG+AGG | - | chr4.3:43026070-43026089 | None:intergenic | 45.0% |
| ! | TGCAACTTTTGCTGCCATTG+AGG | + | chr4.3:43026870-43026889 | MS.gene007699:CDS | 45.0% |
| ! | TGCTGGTGCAGCTCTAATTA+GGG | + | chr4.3:43025222-43025241 | MS.gene007699:CDS | 45.0% |
| ! | TGGAGGTATGAACTCTTTGC+TGG | + | chr4.3:43025829-43025848 | MS.gene007699:intron | 45.0% |
| ! | TGGTTAGTTACCTGGTTGGT+AGG | - | chr4.3:43024194-43024213 | None:intergenic | 45.0% |
| ! | TTAAACGGTAAGGCCTTGTG+GGG | - | chr4.3:43027768-43027787 | None:intergenic | 45.0% |
| !! | GCTGTTGCTTCTATTTCTGC+TGG | + | chr4.3:43025687-43025706 | MS.gene007699:intron | 45.0% |
| !! | TTACCTGGTTGGTAGGAGAA+CGG | - | chr4.3:43024187-43024206 | None:intergenic | 45.0% |
| !! | ATTTATTTATTTATATAAAG+AGG | - | chr4.3:43025021-43025040 | None:intergenic | 5.0% |
| !! | TTTATTTATTTATATAAAGA+GGG | - | chr4.3:43025020-43025039 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTGAA+GGG | + | chr4.3:43025104-43025123 | MS.gene007699:intron | 5.0% |
| AAAGGCGAACCAACATGGGA+GGG | + | chr4.3:43024322-43024341 | MS.gene007699:CDS | 50.0% | |
| ACAACCGTCGAAGTCGAAGA+AGG | + | chr4.3:43025804-43025823 | MS.gene007699:CDS | 50.0% | |
| ACGGCGTGAATCTTGGTCAA+AGG | - | chr4.3:43024405-43024424 | None:intergenic | 50.0% | |
| AGAAGTGGTGAATGGGAGGT+TGG | + | chr4.3:43027572-43027591 | MS.gene007699:CDS | 50.0% | |
| AGCAGAAAGGCGAACCAACA+TGG | + | chr4.3:43024317-43024336 | MS.gene007699:CDS | 50.0% | |
| AGCTGGAGATGGGACTACAA+CGG | + | chr4.3:43025414-43025433 | MS.gene007699:CDS | 50.0% | |
| ATTGGCAAGGTTGGACCTGA+TGG | + | chr4.3:43025747-43025766 | MS.gene007699:CDS | 50.0% | |
| CAAAGGGGCTCTCAATTGAG+TGG | - | chr4.3:43026086-43026105 | None:intergenic | 50.0% | |
| CAATTCCAGCCTGCATAGCA+CGG | - | chr4.3:43024424-43024443 | None:intergenic | 50.0% | |
| CACACCTTGTTACCTTCGCA+GGG | - | chr4.3:43027652-43027671 | None:intergenic | 50.0% | |
| CCTTTCCCCTTACCCAAACA+AGG | - | chr4.3:43027278-43027297 | None:intergenic | 50.0% | |
| CGAAGTCGAAGAAGGAATGG+AGG | + | chr4.3:43025812-43025831 | MS.gene007699:CDS | 50.0% | |
| CGTCGAAGTCGAAGAAGGAA+TGG | + | chr4.3:43025809-43025828 | MS.gene007699:CDS | 50.0% | |
| GAGAGTAAGGCCAACAGCAT+CGG | - | chr4.3:43024456-43024475 | None:intergenic | 50.0% | |
| GAGTTCCAGGCCAGTGATTT+GGG | + | chr4.3:43026562-43026581 | MS.gene007699:CDS | 50.0% | |
| GCAGAAAGGCGAACCAACAT+GGG | + | chr4.3:43024318-43024337 | MS.gene007699:CDS | 50.0% | |
| GCCATCAAAGCTCCAGGATT+TGG | + | chr4.3:43026187-43026206 | MS.gene007699:CDS | 50.0% | |
| GCTGAAGCAATTGGCAAGGT+TGG | + | chr4.3:43025738-43025757 | MS.gene007699:CDS | 50.0% | |
| GCTGCGTGGTATCCTTAATG+TGG | + | chr4.3:43026162-43026181 | MS.gene007699:CDS | 50.0% | |
| GGACTTCTCAGTGTGACATC+AGG | + | chr4.3:43025469-43025488 | MS.gene007699:CDS | 50.0% | |
| GGATAAAATGCGGCCCTGTT+TGG | + | chr4.3:43024682-43024701 | MS.gene007699:intron | 50.0% | |
| GGATGAGTTTGGCAGTCCTA+AGG | + | chr4.3:43025141-43025160 | MS.gene007699:CDS | 50.0% | |
| GGTAGGAGAACGGAGAATTG+AGG | - | chr4.3:43024177-43024196 | None:intergenic | 50.0% | |
| GGTGGAAGAGCTTGAGAAGT+TGG | + | chr4.3:43025543-43025562 | MS.gene007699:CDS | 50.0% | |
| GGTGGTAGAATCCTTGGAGA+TGG | - | chr4.3:43026641-43026660 | None:intergenic | 50.0% | |
| TGAGGTTGAGGATAGAGCGT+TGG | - | chr4.3:43024159-43024178 | None:intergenic | 50.0% | |
| TGAGTTCCAGGCCAGTGATT+TGG | + | chr4.3:43026561-43026580 | MS.gene007699:CDS | 50.0% | |
| TGCCGAAGATATCACTGGTG+AGG | + | chr4.3:43026114-43026133 | MS.gene007699:CDS | 50.0% | |
| TGCTACAGAGACCGAACTTG+AGG | + | chr4.3:43026816-43026835 | MS.gene007699:CDS | 50.0% | |
| TTCGACGGTTGTCTCAAACG+AGG | - | chr4.3:43025796-43025815 | None:intergenic | 50.0% | |
| TTGGCTAGGCCTGTTAAAGG+TGG | + | chr4.3:43025562-43025581 | MS.gene007699:CDS | 50.0% | |
| ! | AGAATGCTGCTTCAGTGGCT+GGG | + | chr4.3:43027678-43027697 | MS.gene007699:CDS | 50.0% |
| ! | CACGCAGCTTGTTCACAACA+AGG | - | chr4.3:43026150-43026169 | None:intergenic | 50.0% |
| ! | CCTTGTTTGGGTAAGGGGAA+AGG | + | chr4.3:43027275-43027294 | MS.gene007699:intron | 50.0% |
| ! | CTTGTTGTGAACAAGCTGCG+TGG | + | chr4.3:43026148-43026167 | MS.gene007699:CDS | 50.0% |
| ! | TCTGCAGAATGCTGCTTCAG+TGG | + | chr4.3:43027673-43027692 | MS.gene007699:CDS | 50.0% |
| ! | TGGTGCAGCTCTAATTAGGG+AGG | + | chr4.3:43025225-43025244 | MS.gene007699:CDS | 50.0% |
| !! | GAGGAAGGTATTGTTCCTGG+CGG | + | chr4.3:43026889-43026908 | MS.gene007699:CDS | 50.0% |
| !! | GATGCTGTTGGCCTTACTCT+CGG | + | chr4.3:43024455-43024474 | MS.gene007699:CDS | 50.0% |
| !!! | AACGGCTTCGATTTTGGCTC+GGG | + | chr4.3:43025432-43025451 | MS.gene007699:CDS | 50.0% |
| !!! | CAACGGCTTCGATTTTGGCT+CGG | + | chr4.3:43025431-43025450 | MS.gene007699:CDS | 50.0% |
| AGATTCACGCCGTGCTATGC+AGG | + | chr4.3:43024412-43024431 | MS.gene007699:CDS | 55.0% | |
| GAAAGGCGAACCAACATGGG+AGG | + | chr4.3:43024321-43024340 | MS.gene007699:CDS | 55.0% | |
| GAAGACGCAGATGAGAGGCT+AGG | + | chr4.3:43026967-43026986 | MS.gene007699:CDS | 55.0% | |
| GACGGTTGTCTCAAACGAGG+AGG | - | chr4.3:43025793-43025812 | None:intergenic | 55.0% | |
| GCACACCTTGTTACCTTCGC+AGG | - | chr4.3:43027653-43027672 | None:intergenic | 55.0% | |
| GCATAGCACGGCGTGAATCT+TGG | - | chr4.3:43024412-43024431 | None:intergenic | 55.0% | |
| GGAGTGGCAGTCATCAAGGT+CGG | + | chr4.3:43026790-43026809 | MS.gene007699:CDS | 55.0% | |
| TCGACCCTGCGAAGGTAACA+AGG | + | chr4.3:43027645-43027664 | MS.gene007699:CDS | 55.0% | |
| TCTCCGTTCTCCTACCAACC+AGG | + | chr4.3:43024181-43024200 | MS.gene007699:CDS | 55.0% | |
| TGGTGGAGTGGCAGTCATCA+AGG | + | chr4.3:43026786-43026805 | MS.gene007699:CDS | 55.0% | |
| ! | CAGAATGCTGCTTCAGTGGC+TGG | + | chr4.3:43027677-43027696 | MS.gene007699:CDS | 55.0% |
| ! | TGGGATGGTCTTGACCACAC+AGG | + | chr4.3:43027697-43027716 | MS.gene007699:CDS | 55.0% |
| !! | ACTGCTAGGTGCTGAGTTCC+AGG | + | chr4.3:43026549-43026568 | MS.gene007699:intron | 55.0% |
| !! | GAAGGTATTGTTCCTGGCGG+AGG | + | chr4.3:43026892-43026911 | MS.gene007699:CDS | 55.0% |
| ACCAATGCTGTACCTCCGCC+AGG | - | chr4.3:43026907-43026926 | None:intergenic | 60.0% | |
| ACTCGGAGAAACTGGCCGAG+AGG | + | chr4.3:43026749-43026768 | MS.gene007699:CDS | 60.0% | |
| GAAGGCCCAAATCACTGGCC+TGG | - | chr4.3:43026570-43026589 | None:intergenic | 60.0% | |
| GTGGCTGCCATCAAAGCTCC+AGG | + | chr4.3:43026181-43026200 | MS.gene007699:CDS | 60.0% | |
| TACCTCGGGGTCCGAGAGTA+AGG | - | chr4.3:43024469-43024488 | None:intergenic | 60.0% | |
| TGGAGTCATCGACCCTGCGA+AGG | + | chr4.3:43027637-43027656 | MS.gene007699:CDS | 60.0% | |
| ! | TCCTGGCGGAGGTACAGCAT+TGG | + | chr4.3:43026903-43026922 | MS.gene007699:CDS | 60.0% |
| ! | TGCTGCTTCAGTGGCTGGGA+TGG | + | chr4.3:43027682-43027701 | MS.gene007699:CDS | 60.0% |
| TCACGCCGTGCTATGCAGGC+TGG | + | chr4.3:43024416-43024435 | MS.gene007699:CDS | 65.0% | |
| GCAGCAGCCACAGCTGCCCT+GGG | - | chr4.3:43027746-43027765 | None:intergenic | 70.0% | |
| GCCACAGCTGCCCTGGGCTT+AGG | - | chr4.3:43027740-43027759 | None:intergenic | 70.0% | |
| GCCTAAGCCCAGGGCAGCTG+TGG | + | chr4.3:43027736-43027755 | MS.gene007699:CDS | 70.0% | |
| GCTGTGGCTGCTGCCCCACA+AGG | + | chr4.3:43027752-43027771 | MS.gene007699:CDS | 70.0% | |
| GGCCTTACTCTCGGACCCCG+AGG | + | chr4.3:43024464-43024483 | MS.gene007699:CDS | 70.0% | |
| GGCAGCAGCCACAGCTGCCC+TGG | - | chr4.3:43027747-43027766 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 43024146 | 43027787 | 43024146 | ID=MS.gene007699 |
| chr4.3 | mRNA | 43024146 | 43027787 | 43024146 | ID=MS.gene007699.t1;Parent=MS.gene007699 |
| chr4.3 | exon | 43024146 | 43024202 | 43024146 | ID=MS.gene007699.t1.exon1;Parent=MS.gene007699.t1 |
| chr4.3 | CDS | 43024146 | 43024202 | 43024146 | ID=cds.MS.gene007699.t1;Parent=MS.gene007699.t1 |
| chr4.3 | exon | 43024302 | 43024485 | 43024302 | ID=MS.gene007699.t1.exon2;Parent=MS.gene007699.t1 |
| chr4.3 | CDS | 43024302 | 43024485 | 43024302 | ID=cds.MS.gene007699.t1;Parent=MS.gene007699.t1 |
| chr4.3 | exon | 43025125 | 43025246 | 43025125 | ID=MS.gene007699.t1.exon3;Parent=MS.gene007699.t1 |
| chr4.3 | CDS | 43025125 | 43025246 | 43025125 | ID=cds.MS.gene007699.t1;Parent=MS.gene007699.t1 |
| chr4.3 | exon | 43025391 | 43025598 | 43025391 | ID=MS.gene007699.t1.exon4;Parent=MS.gene007699.t1 |
| chr4.3 | CDS | 43025391 | 43025598 | 43025391 | ID=cds.MS.gene007699.t1;Parent=MS.gene007699.t1 |
| chr4.3 | exon | 43025688 | 43025833 | 43025688 | ID=MS.gene007699.t1.exon5;Parent=MS.gene007699.t1 |
| chr4.3 | CDS | 43025688 | 43025833 | 43025688 | ID=cds.MS.gene007699.t1;Parent=MS.gene007699.t1 |
| chr4.3 | exon | 43025947 | 43026253 | 43025947 | ID=MS.gene007699.t1.exon6;Parent=MS.gene007699.t1 |
| chr4.3 | CDS | 43025947 | 43026253 | 43025947 | ID=cds.MS.gene007699.t1;Parent=MS.gene007699.t1 |
| chr4.3 | exon | 43026557 | 43027008 | 43026557 | ID=MS.gene007699.t1.exon7;Parent=MS.gene007699.t1 |
| chr4.3 | CDS | 43026557 | 43027008 | 43026557 | ID=cds.MS.gene007699.t1;Parent=MS.gene007699.t1 |
| chr4.3 | exon | 43027500 | 43027787 | 43027500 | ID=MS.gene007699.t1.exon8;Parent=MS.gene007699.t1 |
| chr4.3 | CDS | 43027500 | 43027787 | 43027500 | ID=cds.MS.gene007699.t1;Parent=MS.gene007699.t1 |
| Gene Sequence |
| Protein sequence |
