Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24509.t1 | XP_013465955.1 | 99.6 | 569 | 2 | 0 | 24 | 592 | 23 | 591 | 3.00E-306 | 1060.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24509.t1 | P08927 | 93.7 | 568 | 36 | 0 | 24 | 591 | 26 | 593 | 3.3e-290 | 998.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24509.t1 | A0A072VEG8 | 99.6 | 569 | 2 | 0 | 24 | 592 | 23 | 591 | 2.1e-306 | 1060.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene24509 | 0.807156 | 5.80E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene24509 | 0.815589 | 8.56E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene24509 | 0.809269 | 2.06E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene24509 | 0.818154 | 2.27E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene24509 | 0.803874 | 2.83E-49 | -1.69E-46 |
| MS.gene051257 | MS.gene24509 | 0.807525 | 4.84E-50 | -1.69E-46 |
| MS.gene051662 | MS.gene24509 | 0.814882 | 1.23E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene24509 | 0.828284 | 9.79E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene24509 | 0.835327 | 1.79E-56 | -1.69E-46 |
| MS.gene05455 | MS.gene24509 | 0.819682 | 1.02E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene24509 | 0.844392 | 7.78E-59 | -1.69E-46 |
| MS.gene056875 | MS.gene24509 | 0.811473 | 6.88E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene24509 | 0.811527 | 6.70E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene24509 | 0.814839 | 1.26E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene24509 | 0.823274 | 1.51E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24509.t1 | MTR_1g017380 | 99.324 | 592 | 3 | 1 | 1 | 592 | 1 | 591 | 0.0 | 1165 |
| MS.gene24509.t1 | MTR_1g017390 | 98.818 | 592 | 6 | 1 | 1 | 592 | 1 | 591 | 0.0 | 1160 |
| MS.gene24509.t1 | MTR_4g057970 | 51.195 | 586 | 280 | 5 | 1 | 584 | 1 | 582 | 0.0 | 543 |
| MS.gene24509.t1 | MTR_4g084130 | 48.134 | 536 | 272 | 5 | 44 | 577 | 37 | 568 | 1.77e-170 | 497 |
| MS.gene24509.t1 | MTR_1g090140 | 45.267 | 581 | 302 | 5 | 11 | 586 | 4 | 573 | 3.41e-167 | 488 |
| MS.gene24509.t1 | MTR_1g090130 | 46.269 | 536 | 279 | 4 | 39 | 573 | 29 | 556 | 3.36e-162 | 475 |
| MS.gene24509.t1 | MTR_8g017080 | 43.137 | 561 | 304 | 6 | 38 | 586 | 18 | 575 | 1.73e-149 | 443 |
| MS.gene24509.t1 | MTR_4g084130 | 47.912 | 455 | 234 | 3 | 125 | 577 | 3 | 456 | 1.32e-143 | 424 |
| MS.gene24509.t1 | MTR_0991s0010 | 96.237 | 186 | 6 | 1 | 1 | 186 | 1 | 185 | 1.49e-118 | 349 |
| MS.gene24509.t1 | MTR_5g087560 | 23.252 | 572 | 329 | 22 | 65 | 591 | 30 | 536 | 4.34e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24509.t1 | AT1G55490 | 91.912 | 544 | 44 | 0 | 48 | 591 | 56 | 599 | 0.0 | 1004 |
| MS.gene24509.t1 | AT1G55490 | 91.912 | 544 | 44 | 0 | 48 | 591 | 56 | 599 | 0.0 | 1004 |
| MS.gene24509.t1 | AT1G55490 | 91.912 | 544 | 44 | 0 | 48 | 591 | 56 | 599 | 0.0 | 1004 |
| MS.gene24509.t1 | AT1G55490 | 91.912 | 544 | 44 | 0 | 48 | 591 | 56 | 599 | 0.0 | 1004 |
| MS.gene24509.t1 | AT1G55490 | 91.912 | 544 | 44 | 0 | 48 | 591 | 56 | 599 | 0.0 | 1004 |
| MS.gene24509.t1 | AT3G13470 | 89.910 | 555 | 55 | 1 | 37 | 591 | 42 | 595 | 0.0 | 1001 |
| MS.gene24509.t1 | AT5G56500 | 89.408 | 557 | 57 | 2 | 37 | 592 | 42 | 597 | 0.0 | 993 |
| MS.gene24509.t1 | AT5G56500 | 89.408 | 557 | 57 | 2 | 37 | 592 | 42 | 597 | 0.0 | 993 |
| MS.gene24509.t1 | AT1G26230 | 66.318 | 573 | 192 | 1 | 13 | 584 | 4 | 576 | 0.0 | 781 |
| MS.gene24509.t1 | AT1G26230 | 68.593 | 519 | 163 | 0 | 66 | 584 | 6 | 524 | 0.0 | 746 |
| MS.gene24509.t1 | AT1G26230 | 68.932 | 515 | 160 | 0 | 70 | 584 | 2 | 516 | 0.0 | 744 |
| MS.gene24509.t1 | AT1G26230 | 64.833 | 509 | 178 | 1 | 13 | 520 | 4 | 512 | 0.0 | 672 |
| MS.gene24509.t1 | AT1G26230 | 64.237 | 439 | 156 | 1 | 13 | 450 | 4 | 442 | 0.0 | 576 |
| MS.gene24509.t1 | AT2G28000 | 51.583 | 537 | 255 | 4 | 37 | 572 | 37 | 569 | 0.0 | 528 |
| MS.gene24509.t1 | AT2G33210 | 46.346 | 561 | 291 | 6 | 22 | 579 | 9 | 562 | 1.42e-166 | 487 |
| MS.gene24509.t1 | AT3G23990 | 45.280 | 572 | 296 | 5 | 8 | 578 | 5 | 560 | 8.50e-166 | 485 |
| MS.gene24509.t1 | AT2G33210 | 46.168 | 561 | 287 | 7 | 22 | 579 | 9 | 557 | 8.51e-163 | 477 |
| MS.gene24509.t1 | AT3G13860 | 45.985 | 548 | 285 | 6 | 48 | 592 | 33 | 572 | 7.24e-156 | 459 |
| MS.gene24509.t1 | AT5G18820 | 45.709 | 571 | 295 | 7 | 12 | 579 | 7 | 565 | 1.14e-155 | 459 |
| MS.gene24509.t1 | AT5G18820 | 46.943 | 458 | 239 | 4 | 125 | 579 | 3 | 459 | 2.05e-127 | 382 |
| MS.gene24509.t1 | AT5G18820 | 45.455 | 385 | 206 | 3 | 44 | 427 | 31 | 412 | 5.23e-103 | 319 |
| MS.gene24509.t1 | AT3G11830 | 23.105 | 554 | 310 | 21 | 65 | 566 | 30 | 519 | 2.26e-11 | 67.0 |
| MS.gene24509.t1 | AT3G11830 | 23.022 | 556 | 310 | 21 | 65 | 566 | 30 | 521 | 4.59e-11 | 66.2 |
Find 146 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTGCAATTATCAAAAT+AGG | 0.166829 | 1.1:+5135804 | None:intergenic |
| TTGGCCATGGCGGAGACTTT+AGG | 0.197463 | 1.1:+5138521 | None:intergenic |
| AACTACTACCTCTGTTGTTT+TGG | 0.233024 | 1.1:-5137637 | MS.gene24509:CDS |
| TGAGAATATTGGTGCTAAAT+TGG | 0.241648 | 1.1:-5137703 | MS.gene24509:CDS |
| TGGCCATGGCGGAGACTTTA+GGG | 0.256398 | 1.1:+5138522 | None:intergenic |
| GCACTTAAGGCTCCTGGATT+TGG | 0.266390 | 1.1:-5135717 | MS.gene24509:CDS |
| AACTATTGTGGTTGTATCTT+TGG | 0.272759 | 1.1:+5135436 | None:intergenic |
| AATCTATAAATCACCTTTGT+TGG | 0.276775 | 1.1:+5134153 | None:intergenic |
| CTCGCTTGGTAACTGCTTCT+TGG | 0.288189 | 1.1:+5135399 | None:intergenic |
| AGAACAACATTCCTTCCTTT+AGG | 0.335817 | 1.1:+5138319 | None:intergenic |
| ACACCATCATTAACAATCTT+AGG | 0.351092 | 1.1:+5138277 | None:intergenic |
| CCTGGTGAGAGCGACGTTGC+TGG | 0.360381 | 1.1:+5138556 | None:intergenic |
| TGTGAACAAGCTTGCAGATT+TGG | 0.366191 | 1.1:-5138359 | MS.gene24509:CDS |
| TTTAGGGTTCCGATTCTTCC+TGG | 0.368398 | 1.1:+5138538 | None:intergenic |
| TGGCGGTGTGGCTGTAATTC+AGG | 0.378807 | 1.1:-5134986 | MS.gene24509:intron |
| CCTCTGCAATTATCAAAATA+GGG | 0.385162 | 1.1:+5135805 | None:intergenic |
| CTGTGTTGTTGTTGAGATAA+AGG | 0.387501 | 1.1:-5133543 | MS.gene24509:CDS |
| TCGCTTGGTAACTGCTTCTT+GGG | 0.387602 | 1.1:+5135400 | None:intergenic |
| GTTGTTCTTGAGAGCAAGTA+TGG | 0.388399 | 1.1:-5138304 | MS.gene24509:CDS |
| AGCCGCCAAGACAAATGATT+TGG | 0.391455 | 1.1:-5137670 | MS.gene24509:CDS |
| ACTGAAGATTGCAGCACTTA+AGG | 0.394593 | 1.1:-5135730 | MS.gene24509:CDS |
| TACGGATATAATGCTGCAAC+TGG | 0.399922 | 1.1:-5134213 | MS.gene24509:CDS |
| CTTGTTGTGAACAAACTTAG+AGG | 0.403832 | 1.1:-5135756 | MS.gene24509:CDS |
| GGTAACCCAATGGACAATTC+AGG | 0.411976 | 1.1:-5133500 | MS.gene24509:intron |
| GGATATTGAACAAGAAGCTT+TGG | 0.413311 | 1.1:-5135784 | MS.gene24509:CDS |
| AAAGCTGGGAATGAGGTTCT+AGG | 0.414128 | 1.1:-5135482 | MS.gene24509:CDS |
| GTTGAGGAGGGTATTGTAGT+TGG | 0.422734 | 1.1:-5134695 | MS.gene24509:CDS |
| GATGATATTGCCATCTTGAC+AGG | 0.432753 | 1.1:-5135672 | MS.gene24509:CDS |
| TTAGCACCAATATTCTCAAC+TGG | 0.436766 | 1.1:+5137708 | None:intergenic |
| CGCCAAATCATTTGTCTTGG+CGG | 0.437709 | 1.1:+5137668 | None:intergenic |
| GAGGATCCAGTTGAGAATAT+TGG | 0.438153 | 1.1:-5137714 | MS.gene24509:CDS |
| TTGTCCATTGGGTTACCAAC+AGG | 0.439504 | 1.1:+5133506 | None:intergenic |
| TGGCAATATCATCAAGGTAT+TGG | 0.445375 | 1.1:+5135682 | None:intergenic |
| GAGGGTATTGTAGTTGGCGG+TGG | 0.446592 | 1.1:-5134689 | MS.gene24509:CDS |
| GTTGAGTAAGGTTGGTAGAA+AGG | 0.446649 | 1.1:-5136136 | MS.gene24509:CDS |
| TGGTGCTAAATTGGTTAGAC+AGG | 0.448444 | 1.1:-5137694 | MS.gene24509:CDS |
| GCCCGCCAAATCATTTGTCT+TGG | 0.448540 | 1.1:+5137665 | None:intergenic |
| GATTTGGTTGGTGTTACTCT+TGG | 0.449977 | 1.1:-5138343 | MS.gene24509:CDS |
| CTCACTGTCTGTAACAAAGT+AGG | 0.452915 | 1.1:+5136026 | None:intergenic |
| ATTGCAGCACTTAAGGCTCC+TGG | 0.453971 | 1.1:-5135723 | MS.gene24509:CDS |
| GGACTTAGCTTAGACAAAGC+TGG | 0.456634 | 1.1:-5135497 | MS.gene24509:CDS |
| GGTGTTACTCTTGGTCCTAA+AGG | 0.456739 | 1.1:-5138334 | MS.gene24509:CDS |
| CTTAATTTGTGAAACTCGCT+TGG | 0.457406 | 1.1:+5135385 | None:intergenic |
| ACAAATTAAGAACCAAATTG+AGG | 0.459257 | 1.1:-5135372 | MS.gene24509:intron |
| TCTTATTGCAGAAGGTGTTA+AGG | 0.461521 | 1.1:-5137607 | MS.gene24509:intron |
| CTCTTGCGTTCTCCAAATCC+AGG | 0.466422 | 1.1:+5135705 | None:intergenic |
| GAAAGGATTGCAAAACTGTC+TGG | 0.467114 | 1.1:-5135006 | MS.gene24509:CDS |
| TTTGTTGAAATACAACTCCT+TGG | 0.469848 | 1.1:+5138502 | None:intergenic |
| TACATACCTGAATTGTCCAT+TGG | 0.470599 | 1.1:+5133494 | None:intergenic |
| GAGTTGTATTTCAACAAAGA+TGG | 0.475978 | 1.1:-5138497 | MS.gene24509:CDS |
| TTCTGCGGGCGGAAGAAGAT+GGG | 0.478610 | 1.1:+5138585 | None:intergenic |
| TATGAAGATTTAATGTCGGC+TGG | 0.480383 | 1.1:-5134186 | MS.gene24509:CDS |
| GACTTAGCTTAGACAAAGCT+GGG | 0.483882 | 1.1:-5135496 | MS.gene24509:CDS |
| GATAGCTGAGGCGTTGAGTA+AGG | 0.484566 | 1.1:-5136148 | MS.gene24509:CDS |
| GAAAGAATAAGTCACCTTTG+TGG | 0.484771 | 1.1:+5134787 | None:intergenic |
| ACAAATGATTTGGCGGGCGA+TGG | 0.485667 | 1.1:-5137660 | MS.gene24509:CDS |
| CCAGGTGGTCAGATGTTGCT+TGG | 0.488161 | 1.1:-5133606 | MS.gene24509:intron |
| TAAACAAACACACACCTCTC+TGG | 0.488579 | 1.1:+5138246 | None:intergenic |
| AAAGATACAACCACAATAGT+TGG | 0.489610 | 1.1:-5135434 | MS.gene24509:CDS |
| GCAGGTTGAGGATAGTGAAT+TGG | 0.491700 | 1.1:-5136220 | MS.gene24509:intron |
| ATCAAAGGTGGATGCAATCA+AGG | 0.491996 | 1.1:-5134645 | MS.gene24509:CDS |
| CTTTCAGGCCGCTGTTGAGG+AGG | 0.494985 | 1.1:-5134708 | MS.gene24509:intron |
| GTTAATAAGATCCCTTGCAT+TGG | 0.496312 | 1.1:+5135857 | None:intergenic |
| TCGCTCTCACCAGGAAGAAT+CGG | 0.501628 | 1.1:-5138547 | MS.gene24509:CDS |
| TTACTTTCAGGCCGCTGTTG+AGG | 0.503371 | 1.1:-5134711 | MS.gene24509:intron |
| AGAAGATGGGAATGAAGAAA+TGG | 0.505552 | 1.1:+5138598 | None:intergenic |
| ACATACCTGAATTGTCCATT+GGG | 0.507022 | 1.1:+5133495 | None:intergenic |
| TGCAGAACAAGATTATGAAA+AGG | 0.511288 | 1.1:-5135040 | MS.gene24509:CDS |
| AGGGTATTGTAGTTGGCGGT+GGG | 0.514410 | 1.1:-5134688 | MS.gene24509:CDS |
| GCTCAGGGTCTTATTGCAGA+AGG | 0.514992 | 1.1:-5137615 | MS.gene24509:CDS |
| TTACCAACAGGTGCAGCCTC+AGG | 0.516329 | 1.1:+5133518 | None:intergenic |
| TTGAGTAAGGTTGGTAGAAA+GGG | 0.519613 | 1.1:-5136135 | MS.gene24509:CDS |
| CGCCAAGACAAATGATTTGG+CGG | 0.520388 | 1.1:-5137667 | MS.gene24509:CDS |
| TCTCCTAAGATTGTTAATGA+TGG | 0.522934 | 1.1:-5138280 | MS.gene24509:CDS |
| CTTAGACAAAGCTGGGAATG+AGG | 0.523660 | 1.1:-5135489 | MS.gene24509:CDS |
| TCACTGTCTGTAACAAAGTA+GGG | 0.525001 | 1.1:+5136027 | None:intergenic |
| GGTTCTAGGCACTGCGGCCA+AGG | 0.525331 | 1.1:-5135468 | MS.gene24509:CDS |
| TTTCTGCGGGCGGAAGAAGA+TGG | 0.527764 | 1.1:+5138584 | None:intergenic |
| TCCGTATCTCGTATCGTCGT+TGG | 0.531135 | 1.1:+5134230 | None:intergenic |
| CCAGCAACGTCGCTCTCACC+AGG | 0.531654 | 1.1:-5138556 | MS.gene24509:CDS |
| TAAAGTCTCCGCCATGGCCA+AGG | 0.533355 | 1.1:-5138519 | MS.gene24509:CDS |
| ATCTTTGGTGAGCACCACCT+TGG | 0.533468 | 1.1:+5135451 | None:intergenic |
| ATACCACGTGTGATAAGCAC+AGG | 0.537355 | 1.1:+5137445 | None:intergenic |
| GCCAAGACAAATGATTTGGC+GGG | 0.544783 | 1.1:-5137666 | MS.gene24509:CDS |
| GATGTGGCAGCAGTTAGTGC+AGG | 0.549028 | 1.1:-5136195 | MS.gene24509:CDS |
| ACTTAAACTGATGTCAAAAG+AGG | 0.549610 | 1.1:-5137392 | MS.gene24509:intron |
| TTTACTCAGACTTGCATCAA+AGG | 0.550536 | 1.1:-5134660 | MS.gene24509:CDS |
| TTATAAACCTCCTGTCAAGA+TGG | 0.550939 | 1.1:+5135662 | None:intergenic |
| AAATGGCAGCGGAGGAAGAG+AGG | 0.551209 | 1.1:+5138615 | None:intergenic |
| ACTTCCATCACCAACTATTG+TGG | 0.557957 | 1.1:+5135424 | None:intergenic |
| CACTTGGAGTTTCTTGATAG+CGG | 0.558411 | 1.1:+5138472 | None:intergenic |
| CTAGAGGACGCAATTAGAAA+CGG | 0.558599 | 1.1:-5135831 | MS.gene24509:CDS |
| GAGGAGGGTATTGTAGTTGG+CGG | 0.560061 | 1.1:-5134692 | MS.gene24509:CDS |
| AAAAGGAGAAGCTGAACGAA+AGG | 0.560321 | 1.1:-5135023 | MS.gene24509:CDS |
| TTTCAGGCCGCTGTTGAGGA+GGG | 0.565478 | 1.1:-5134707 | MS.gene24509:intron |
| AACAAGCTTGCAGATTTGGT+TGG | 0.565866 | 1.1:-5138355 | MS.gene24509:CDS |
| AAACAATCTGTATGTTGTTG+AGG | 0.570389 | 1.1:-5136079 | MS.gene24509:CDS |
| TTACTCTTGGTCCTAAAGGA+AGG | 0.571092 | 1.1:-5138330 | MS.gene24509:CDS |
| AACAATCTGTATGTTGTTGA+GGG | 0.571719 | 1.1:-5136078 | MS.gene24509:CDS |
| GAACCTGAGGCTGCACCTGT+TGG | 0.571946 | 1.1:-5133521 | MS.gene24509:CDS |
| AAAATATGAAGATTTAATGT+CGG | 0.572459 | 1.1:-5134190 | MS.gene24509:CDS |
| TGCAAAACTGTCTGGCGGTG+TGG | 0.580627 | 1.1:-5134998 | MS.gene24509:CDS |
| GCTGAGGCGTTGAGTAAGGT+TGG | 0.581310 | 1.1:-5136144 | MS.gene24509:CDS |
| TGGCAGTGTTGTTAGTGAGA+AGG | 0.588442 | 1.1:-5134342 | MS.gene24509:intron |
| GAAATACAACTCCTTGGCCA+TGG | 0.589176 | 1.1:+5138508 | None:intergenic |
| TCCAACGACGATACGAGATA+CGG | 0.590192 | 1.1:-5134231 | MS.gene24509:CDS |
| TCTAGGCACTGCGGCCAAGG+TGG | 0.592690 | 1.1:-5135465 | MS.gene24509:CDS |
| ACAACCACAATAGTTGGTGA+TGG | 0.599514 | 1.1:-5135428 | MS.gene24509:CDS |
| GCAGGGAACAATCATGAGGT+AGG | 0.602361 | 1.1:-5136177 | MS.gene24509:CDS |
| TCAAGATGGCAATATCATCA+AGG | 0.606055 | 1.1:+5135676 | None:intergenic |
| TCGTGACACTTGAGGAGGGA+AGG | 0.606314 | 1.1:-5136110 | MS.gene24509:CDS |
| GATATTGCCATCTTGACAGG+AGG | 0.609386 | 1.1:-5135669 | MS.gene24509:intron |
| GGAAAAGAAATTGAGAGTTG+AGG | 0.612753 | 1.1:-5134822 | MS.gene24509:CDS |
| ACTCAGACTTGCATCAAAGG+TGG | 0.617901 | 1.1:-5134657 | MS.gene24509:CDS |
| ACAAACTGAGACAGAACTCA+AGG | 0.620054 | 1.1:-5134843 | MS.gene24509:CDS |
| ACTGTTATCAGAGAGGAGGT+TGG | 0.622682 | 1.1:-5135518 | MS.gene24509:CDS |
| GAATGAAGAAATGGCAGCGG+AGG | 0.629838 | 1.1:+5138607 | None:intergenic |
| TGGGAATGAAGAAATGGCAG+CGG | 0.632892 | 1.1:+5138604 | None:intergenic |
| GGATAGTGAATTGGCTGATG+TGG | 0.636323 | 1.1:-5136211 | MS.gene24509:CDS |
| TACAATACCCTCCTCAACAG+CGG | 0.645508 | 1.1:+5134700 | None:intergenic |
| GGAGAGATTGCATGATGCCA+TGG | 0.645511 | 1.1:+5138646 | None:intergenic |
| AACCCTGTGCTTATCACACG+TGG | 0.648183 | 1.1:-5137448 | MS.gene24509:CDS |
| AGGTACTGTTATCAGAGAGG+AGG | 0.651028 | 1.1:-5135522 | MS.gene24509:CDS |
| TGCACCTGTTGGTAACCCAA+TGG | 0.655339 | 1.1:-5133510 | MS.gene24509:CDS |
| GGGTGTCGTGACACTTGAGG+AGG | 0.655940 | 1.1:-5136115 | MS.gene24509:CDS |
| GAACCCTAAAGTCTCCGCCA+TGG | 0.655961 | 1.1:-5138525 | MS.gene24509:CDS |
| GGAGGAAGAGAGGTTGCATG+AGG | 0.656006 | 1.1:+5138625 | None:intergenic |
| GAGGGCATGCAATTTGATCG+AGG | 0.658220 | 1.1:-5136060 | MS.gene24509:CDS |
| ATGTGGCAGCAGTTAGTGCA+GGG | 0.658714 | 1.1:-5136194 | MS.gene24509:CDS |
| AAAGGGTGTCGTGACACTTG+AGG | 0.659317 | 1.1:-5136118 | MS.gene24509:CDS |
| GGTGAGAGCGACGTTGCTGG+TGG | 0.659437 | 1.1:+5138559 | None:intergenic |
| GGTGTCGTGACACTTGAGGA+GGG | 0.659758 | 1.1:-5136114 | MS.gene24509:CDS |
| TGGAATCATTGATCCAACAA+AGG | 0.669141 | 1.1:-5134166 | MS.gene24509:intron |
| GGATCTTATTAACATACTAG+AGG | 0.670020 | 1.1:-5135847 | MS.gene24509:CDS |
| TGGTGTCACTGTTGCCAGAG+AGG | 0.672652 | 1.1:-5138260 | MS.gene24509:intron |
| AGGATTGCAAAACTGTCTGG+CGG | 0.685391 | 1.1:-5135003 | MS.gene24509:CDS |
| ATACAACTCCTTGGCCATGG+CGG | 0.687069 | 1.1:+5138511 | None:intergenic |
| GGTAGGAAATATGATAGCTG+AGG | 0.689740 | 1.1:-5136160 | MS.gene24509:CDS |
| GGACGCTCTTAATGCCACAA+AGG | 0.695512 | 1.1:-5134801 | MS.gene24509:intron |
| TACAGGTACTGTTATCAGAG+AGG | 0.700067 | 1.1:-5135525 | MS.gene24509:intron |
| TAGTGCAGGGAACAATCATG+AGG | 0.700989 | 1.1:-5136181 | MS.gene24509:CDS |
| TGTTGAGATAAAGGAACCTG+AGG | 0.713419 | 1.1:-5133534 | MS.gene24509:CDS |
| TGTTGAATTTGAGAACTGCA+AGG | 0.717558 | 1.1:-5135995 | MS.gene24509:intron |
| ACCCTGAGCCAAAACAACAG+AGG | 0.733850 | 1.1:+5137629 | None:intergenic |
| TACCACGTGTGATAAGCACA+GGG | 0.740125 | 1.1:+5137446 | None:intergenic |
| GAATGAGGTTCTAGGCACTG+CGG | 0.821029 | 1.1:-5135474 | MS.gene24509:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAGAAAAAAAAAAAAAAT+TGG | + | chr1.1:5134738-5134757 | None:intergenic | 10.0% |
| !! | TAAAAAAGAAAGAAAAAAAA+AGG | + | chr1.1:5135068-5135087 | None:intergenic | 10.0% |
| !!! | AAACTATGATTTTAAATATT+GGG | - | chr1.1:5138571-5138590 | MS.gene24509:CDS | 10.0% |
| !!! | AAATAAAATAAAACTGATTT+TGG | + | chr1.1:5134977-5134996 | None:intergenic | 10.0% |
| !!! | TAAACTATGATTTTAAATAT+TGG | - | chr1.1:5138570-5138589 | MS.gene24509:CDS | 10.0% |
| !!! | TTTATTTTATTTTATAAACC+CGG | - | chr1.1:5134990-5135009 | MS.gene24509:CDS | 10.0% |
| !! | AAAAAATATCTCCATATAAA+GGG | + | chr1.1:5137280-5137299 | None:intergenic | 15.0% |
| !! | AAAATATGAAGATTTAATGT+CGG | - | chr1.1:5137637-5137656 | MS.gene24509:CDS | 15.0% |
| !! | ATAACTTTATAATTAAAACG+CGG | - | chr1.1:5137386-5137405 | MS.gene24509:intron | 15.0% |
| !! | TATAAAGTTATAATTAGTGT+CGG | + | chr1.1:5137377-5137396 | None:intergenic | 15.0% |
| !! | TCCATTATTAATTAATAACA+CGG | + | chr1.1:5138386-5138405 | None:intergenic | 15.0% |
| !!! | AATAAACAATGGTATTTTTT+TGG | + | chr1.1:5138492-5138511 | None:intergenic | 15.0% |
| !!! | AGAGTGAAATTTTATTTTAT+AGG | - | chr1.1:5134339-5134358 | MS.gene24509:intron | 15.0% |
| !!! | GTTTTTTTAGATTGATTAAT+TGG | - | chr1.1:5135313-5135332 | MS.gene24509:intron | 15.0% |
| !!! | TGTTAGTTTTGATTAAATTT+TGG | - | chr1.1:5137829-5137848 | MS.gene24509:intron | 15.0% |
| !!! | TTAAAAAATGCGAAATATTT+TGG | - | chr1.1:5136580-5136599 | MS.gene24509:intron | 15.0% |
| !!! | TTCTTTTTTATGAATTGAAA+TGG | - | chr1.1:5135078-5135097 | MS.gene24509:intron | 15.0% |
| !!! | TTTACTTGAATTATTGTTTT+AGG | - | chr1.1:5133947-5133966 | MS.gene24509:intron | 15.0% |
| !!! | TTTTAGTGAATTAATAATGT+GGG | - | chr1.1:5134041-5134060 | MS.gene24509:intron | 15.0% |
| !!! | TTTTTAGTGAATTAATAATG+TGG | - | chr1.1:5134040-5134059 | MS.gene24509:intron | 15.0% |
| !! | AAAAAAAGTCTACATTATAC+AGG | - | chr1.1:5136712-5136731 | MS.gene24509:intron | 20.0% |
| !! | AAAAATATCTCCATATAAAG+GGG | + | chr1.1:5137279-5137298 | None:intergenic | 20.0% |
| !! | AAAATGTCTACATATTCTAT+AGG | - | chr1.1:5136763-5136782 | MS.gene24509:intron | 20.0% |
| !! | AAATTAATAGCAAAAAATGC+TGG | - | chr1.1:5137456-5137475 | MS.gene24509:CDS | 20.0% |
| !! | ACCATTAATGTAAAAAACAT+AGG | + | chr1.1:5135491-5135510 | None:intergenic | 20.0% |
| !! | ACTAGAACATAAAATAAATC+AGG | + | chr1.1:5138007-5138026 | None:intergenic | 20.0% |
| !! | CAAAAAATATCTCCATATAA+AGG | + | chr1.1:5137281-5137300 | None:intergenic | 20.0% |
| !! | TTCCTTAGAAAAATTGTATT+TGG | - | chr1.1:5137910-5137929 | MS.gene24509:intron | 20.0% |
| !! | TTTAGTGAATTAATAATGTG+GGG | - | chr1.1:5134042-5134061 | MS.gene24509:intron | 20.0% |
| !!! | ACCGTGTTATTAATTAATAA+TGG | - | chr1.1:5138382-5138401 | MS.gene24509:intron | 20.0% |
| !!! | ATGGAGATATTTTTTGTTTT+AGG | - | chr1.1:5137285-5137304 | MS.gene24509:intron | 20.0% |
| !!! | ATTCTATGACGATTTTTAAA+AGG | - | chr1.1:5138058-5138077 | MS.gene24509:intron | 20.0% |
| !!! | ATTTATTTTGTCTGAGTTTA+GGG | - | chr1.1:5133839-5133858 | MS.gene24509:intron | 20.0% |
| !!! | ATTTTTATTACACGTGTTAT+GGG | - | chr1.1:5134496-5134515 | MS.gene24509:intron | 20.0% |
| !!! | CATTATAAATGGTTTGTATA+TGG | - | chr1.1:5137798-5137817 | MS.gene24509:intron | 20.0% |
| !!! | GTTTTTGTAAATAAACAGTT+AGG | - | chr1.1:5135291-5135310 | MS.gene24509:intron | 20.0% |
| !!! | TAAAATTTCACTCTAAAATG+AGG | + | chr1.1:5134333-5134352 | None:intergenic | 20.0% |
| !!! | TAAATTAAACTTAGCTTGTA+GGG | - | chr1.1:5137768-5137787 | MS.gene24509:intron | 20.0% |
| !!! | TATTTATTTTGTCTGAGTTT+AGG | - | chr1.1:5133838-5133857 | MS.gene24509:intron | 20.0% |
| !!! | TCCTATGTTTTTTACATTAA+TGG | - | chr1.1:5135487-5135506 | MS.gene24509:CDS | 20.0% |
| !!! | TTCACTTGAATTATTGTTTT+TGG | - | chr1.1:5133689-5133708 | MS.gene24509:intron | 20.0% |
| !!! | TTGACTTGAATTATTGTTTT+TGG | - | chr1.1:5133870-5133889 | MS.gene24509:intron | 20.0% |
| !!! | TTTTAGTGAATTAGTTATGT+GGG | - | chr1.1:5133769-5133788 | MS.gene24509:intron | 20.0% |
| !!! | TTTTTAGTGAATTAGTTATG+TGG | - | chr1.1:5133768-5133787 | MS.gene24509:intron | 20.0% |
| !!! | TTTTTGCTATTAATTTCAGA+GGG | + | chr1.1:5137452-5137471 | None:intergenic | 20.0% |
| !!! | TTTTTTCTCAATTAGATGTA+GGG | - | chr1.1:5134887-5134906 | MS.gene24509:intron | 20.0% |
| !!! | TTTTTTGCTATTAATTTCAG+AGG | + | chr1.1:5137453-5137472 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTCAATTAGATGT+AGG | - | chr1.1:5134886-5134905 | MS.gene24509:intron | 20.0% |
| ! | AAAATATCTCCATATAAAGG+GGG | + | chr1.1:5137278-5137297 | None:intergenic | 25.0% |
| ! | AACTTGCAGATTTGTAAATT+AGG | - | chr1.1:5135145-5135164 | MS.gene24509:intron | 25.0% |
| ! | AAGAAATGATAATCAATGAG+GGG | - | chr1.1:5134813-5134832 | MS.gene24509:CDS | 25.0% |
| ! | AATCTATAAATCACCTTTGT+TGG | + | chr1.1:5137677-5137696 | None:intergenic | 25.0% |
| ! | ACAAACCATTTATAATGATG+CGG | + | chr1.1:5137795-5137814 | None:intergenic | 25.0% |
| ! | ACAAATTAAGAACCAAATTG+AGG | - | chr1.1:5136455-5136474 | MS.gene24509:intron | 25.0% |
| ! | AGAGTAATAGGAATAAACAA+TGG | + | chr1.1:5138503-5138522 | None:intergenic | 25.0% |
| ! | ATATACAAGTGCATCTAAAT+AGG | + | chr1.1:5135381-5135400 | None:intergenic | 25.0% |
| ! | ATTTAAACTTAGAAGAGTTG+TGG | - | chr1.1:5135573-5135592 | MS.gene24509:intron | 25.0% |
| ! | CCTTAAAATTCAAGATTCTT+AGG | + | chr1.1:5138548-5138567 | None:intergenic | 25.0% |
| ! | CTTAGAAAAATTGTATTTGG+AGG | - | chr1.1:5137913-5137932 | MS.gene24509:intron | 25.0% |
| ! | GAAGAAATGATAATCAATGA+GGG | - | chr1.1:5134812-5134831 | MS.gene24509:CDS | 25.0% |
| ! | GTATAAAAATCGGCTAAATT+TGG | - | chr1.1:5137507-5137526 | MS.gene24509:intron | 25.0% |
| ! | TAAACCAAAAAAGGAACAAA+GGG | + | chr1.1:5136247-5136266 | None:intergenic | 25.0% |
| ! | TAAGTAACTAATAATGTGCT+TGG | - | chr1.1:5134266-5134285 | MS.gene24509:intron | 25.0% |
| ! | TATACAAGTGCATCTAAATA+GGG | + | chr1.1:5135380-5135399 | None:intergenic | 25.0% |
| ! | TGAAGAAATGATAATCAATG+AGG | - | chr1.1:5134811-5134830 | MS.gene24509:CDS | 25.0% |
| ! | TGGCAAAGATAATAATAAGT+TGG | + | chr1.1:5135880-5135899 | None:intergenic | 25.0% |
| ! | TGTTTACATTTGCGTTAAAA+AGG | - | chr1.1:5134082-5134101 | MS.gene24509:intron | 25.0% |
| ! | TTACTTATTCTTCATGTACA+AGG | + | chr1.1:5136552-5136571 | None:intergenic | 25.0% |
| ! | TTTAGTGAATTAGTTATGTG+GGG | - | chr1.1:5133770-5133789 | MS.gene24509:intron | 25.0% |
| !! | AACTTGTGTAACTTGTATAT+TGG | - | chr1.1:5137564-5137583 | MS.gene24509:intron | 25.0% |
| !! | ATCTTTTTGTAAAACGTTGT+TGG | - | chr1.1:5138604-5138623 | MS.gene24509:CDS | 25.0% |
| !! | CATTTTTATTACACGTGTTA+TGG | - | chr1.1:5134495-5134514 | MS.gene24509:intron | 25.0% |
| !! | CCTAAGAATCTTGAATTTTA+AGG | - | chr1.1:5138545-5138564 | MS.gene24509:CDS | 25.0% |
| !! | CTCCAAATACAATTTTTCTA+AGG | + | chr1.1:5137915-5137934 | None:intergenic | 25.0% |
| !! | GTTTATTGTTTCTCAAAACT+GGG | + | chr1.1:5135235-5135254 | None:intergenic | 25.0% |
| !! | TAAGTAAAAACACAAGTTGA+TGG | + | chr1.1:5135900-5135919 | None:intergenic | 25.0% |
| !! | TAGTGAGAAGGTATAAAAAT+CGG | - | chr1.1:5137497-5137516 | MS.gene24509:intron | 25.0% |
| !! | TCATTAATTCATCCTTTTAC+CGG | - | chr1.1:5137072-5137091 | MS.gene24509:intron | 25.0% |
| !! | TTTATTGTTTCTCAAAACTG+GGG | + | chr1.1:5135234-5135253 | None:intergenic | 25.0% |
| !! | TTTTGGTGAATTAGTTATGT+GGG | - | chr1.1:5133887-5133906 | MS.gene24509:intron | 25.0% |
| !! | TTTTTCTCAATTAGATGTAG+GGG | - | chr1.1:5134888-5134907 | MS.gene24509:intron | 25.0% |
| !! | TTTTTCTTCATCATTTGCAA+GGG | + | chr1.1:5137211-5137230 | None:intergenic | 25.0% |
| !!! | AAAAAATTAGCCTTCAATTC+TGG | - | chr1.1:5135110-5135129 | MS.gene24509:intron | 25.0% |
| !!! | AAAAATTAGCCTTCAATTCT+GGG | - | chr1.1:5135111-5135130 | MS.gene24509:intron | 25.0% |
| !!! | ATGTTCTAGTTTCTTGATTA+GGG | - | chr1.1:5138017-5138036 | MS.gene24509:intron | 25.0% |
| !!! | GTAAATTAAACTTAGCTTGT+AGG | - | chr1.1:5137767-5137786 | MS.gene24509:intron | 25.0% |
| !!! | TAATTTGTTGTCTGAGTTTA+GGG | - | chr1.1:5133721-5133740 | MS.gene24509:intron | 25.0% |
| !!! | TATGTTCTAGTTTCTTGATT+AGG | - | chr1.1:5138016-5138035 | MS.gene24509:intron | 25.0% |
| !!! | TTAATTTGTTGTCTGAGTTT+AGG | - | chr1.1:5133720-5133739 | MS.gene24509:intron | 25.0% |
| !!! | TTTGTGTTTTTGTTACAGAA+TGG | - | chr1.1:5133445-5133464 | MS.gene24509:intron | 25.0% |
| !!! | TTTTAGGTGAATTAGTTATG+TGG | - | chr1.1:5133963-5133982 | MS.gene24509:intron | 25.0% |
| !!! | TTTTTGGTGAATTAGTTATG+TGG | - | chr1.1:5133886-5133905 | MS.gene24509:intron | 25.0% |
| AAACAATCTGTATGTTGTTG+AGG | - | chr1.1:5135748-5135767 | MS.gene24509:CDS | 30.0% | |
| AAACTATGAGCTTATAGAAC+CGG | + | chr1.1:5137094-5137113 | None:intergenic | 30.0% | |
| AAAGATACAACCACAATAGT+TGG | - | chr1.1:5136393-5136412 | MS.gene24509:intron | 30.0% | |
| AACAATCTGTATGTTGTTGA+GGG | - | chr1.1:5135749-5135768 | MS.gene24509:CDS | 30.0% | |
| AACTATTGTGGTTGTATCTT+TGG | + | chr1.1:5136394-5136413 | None:intergenic | 30.0% | |
| AAGTTATAGTTCATGTGAAC+CGG | - | chr1.1:5135341-5135360 | MS.gene24509:intron | 30.0% | |
| AATCATATGAATAGCAGAAG+AGG | - | chr1.1:5135184-5135203 | MS.gene24509:intron | 30.0% | |
| AATTGTATTTGGAGGATGTT+AGG | - | chr1.1:5137921-5137940 | MS.gene24509:intron | 30.0% | |
| ACAAAAAGATATCCAATGCA+AGG | - | chr1.1:5135958-5135977 | MS.gene24509:intron | 30.0% | |
| ACACCATCATTAACAATCTT+AGG | + | chr1.1:5133553-5133572 | None:intergenic | 30.0% | |
| ACTAAACCAAATCTTTGGTT+CGG | - | chr1.1:5134927-5134946 | MS.gene24509:intron | 30.0% | |
| ACTTAAACTGATGTCAAAAG+AGG | - | chr1.1:5134435-5134454 | MS.gene24509:intron | 30.0% | |
| AGTTTCTTGATTAGGGAAAT+TGG | - | chr1.1:5138024-5138043 | MS.gene24509:intron | 30.0% | |
| ATACAAGTGCATCTAAATAG+GGG | + | chr1.1:5135379-5135398 | None:intergenic | 30.0% | |
| ATCATATGAATAGCAGAAGA+GGG | - | chr1.1:5135185-5135204 | MS.gene24509:intron | 30.0% | |
| ATGCCATGCAAACAATATTT+AGG | + | chr1.1:5136514-5136533 | None:intergenic | 30.0% | |
| CAAAAAGATATCCAATGCAA+GGG | - | chr1.1:5135959-5135978 | MS.gene24509:intron | 30.0% | |
| CAAACCATTTATAATGATGC+GGG | + | chr1.1:5137794-5137813 | None:intergenic | 30.0% | |
| CAGATTTGTAAATTAGGAAG+TGG | - | chr1.1:5135151-5135170 | MS.gene24509:intron | 30.0% | |
| CATGAACTAAACCAAATCTT+TGG | - | chr1.1:5134922-5134941 | MS.gene24509:intron | 30.0% | |
| CATGATTTAAGAACCTCATT+TGG | + | chr1.1:5137862-5137881 | None:intergenic | 30.0% | |
| CCTCTGCAATTATCAAAATA+GGG | + | chr1.1:5136025-5136044 | None:intergenic | 30.0% | |
| CTAAACCAAAAAAGGAACAA+AGG | + | chr1.1:5136248-5136267 | None:intergenic | 30.0% | |
| CTCATAGTTTCTTTACTTTC+AGG | - | chr1.1:5137104-5137123 | MS.gene24509:intron | 30.0% | |
| GAGTTGTATTTCAACAAAGA+TGG | - | chr1.1:5133330-5133349 | MS.gene24509:intron | 30.0% | |
| GGATCTTATTAACATACTAG+AGG | - | chr1.1:5135980-5135999 | MS.gene24509:intron | 30.0% | |
| GTTTCTTGATTAGGGAAATT+GGG | - | chr1.1:5138025-5138044 | MS.gene24509:intron | 30.0% | |
| TAATTTCAACCCAGAATTGA+AGG | + | chr1.1:5135123-5135142 | None:intergenic | 30.0% | |
| TCCTCTGCAATTATCAAAAT+AGG | + | chr1.1:5136026-5136045 | None:intergenic | 30.0% | |
| TCTCCTAAGATTGTTAATGA+TGG | - | chr1.1:5133547-5133566 | MS.gene24509:CDS | 30.0% | |
| TGCAGAACAAGATTATGAAA+AGG | - | chr1.1:5136787-5136806 | MS.gene24509:intron | 30.0% | |
| TGCCATGCAAACAATATTTA+GGG | + | chr1.1:5136513-5136532 | None:intergenic | 30.0% | |
| TTACATTTGCGTTAAAAAGG+TGG | - | chr1.1:5134085-5134104 | MS.gene24509:intron | 30.0% | |
| TTTATAAACCCGGTTCAATT+TGG | - | chr1.1:5135000-5135019 | MS.gene24509:CDS | 30.0% | |
| TTTCTTGATTAGGGAAATTG+GGG | - | chr1.1:5138026-5138045 | MS.gene24509:intron | 30.0% | |
| TTTGGTGAATTAGTTATGTG+GGG | - | chr1.1:5133888-5133907 | MS.gene24509:intron | 30.0% | |
| TTTGTTGAAATACAACTCCT+TGG | + | chr1.1:5133328-5133347 | None:intergenic | 30.0% | |
| ! | ATTTTGAACCAAATTGAACC+GGG | + | chr1.1:5135011-5135030 | None:intergenic | 30.0% |
| ! | CTTTTTCTTCATCATTTGCA+AGG | + | chr1.1:5137212-5137231 | None:intergenic | 30.0% |
| ! | GATTTTGAACCAAATTGAAC+CGG | + | chr1.1:5135012-5135031 | None:intergenic | 30.0% |
| ! | GGTTCAATTTGGTTCAAAAT+CGG | - | chr1.1:5135011-5135030 | MS.gene24509:CDS | 30.0% |
| ! | GGTTTATTGTTTCTCAAAAC+TGG | + | chr1.1:5135236-5135255 | None:intergenic | 30.0% |
| ! | TGTGTAACTTGTATATTGGT+AGG | - | chr1.1:5137568-5137587 | MS.gene24509:intron | 30.0% |
| !! | ACGATTTTTAAAAGGCTTCT+TGG | - | chr1.1:5138066-5138085 | MS.gene24509:intron | 30.0% |
| !! | TGAGAATATTGGTGCTAAAT+TGG | - | chr1.1:5134124-5134143 | MS.gene24509:intron | 30.0% |
| !! | TTGCTTGTTGTTACATGATT+GGG | - | chr1.1:5134306-5134325 | MS.gene24509:intron | 30.0% |
| !! | TTGTGTTTTGTTACGAGTAT+AGG | - | chr1.1:5136954-5136973 | MS.gene24509:intron | 30.0% |
| !! | TTTGCTTGTTGTTACATGAT+TGG | - | chr1.1:5134305-5134324 | MS.gene24509:intron | 30.0% |
| !!! | GTTTTTTTTCCCCCTTTATA+TGG | - | chr1.1:5137266-5137285 | MS.gene24509:intron | 30.0% |
| !!! | TTTGTTTTAGGTCCTTGAAA+GGG | - | chr1.1:5137297-5137316 | MS.gene24509:intron | 30.0% |
| !!! | TTTTGTTTTAGGTCCTTGAA+AGG | - | chr1.1:5137296-5137315 | MS.gene24509:intron | 30.0% |
| AAAACATAGGACATTGACAC+CGG | + | chr1.1:5135478-5135497 | None:intergenic | 35.0% | |
| AACTAATAATGTGCTTGGCT+TGG | - | chr1.1:5134271-5134290 | MS.gene24509:intron | 35.0% | |
| ACAAGTCAATAACCCTTTCA+AGG | + | chr1.1:5137312-5137331 | None:intergenic | 35.0% | |
| ACAGTTACACACAGAGTAAT+AGG | + | chr1.1:5138515-5138534 | None:intergenic | 35.0% | |
| ACATACCTGAATTGTCCATT+GGG | + | chr1.1:5138335-5138354 | None:intergenic | 35.0% | |
| ACATCACAGAATTCAGAAAC+AGG | + | chr1.1:5133613-5133632 | None:intergenic | 35.0% | |
| ACCAACAGCTAAACCAAAAA+AGG | + | chr1.1:5136256-5136275 | None:intergenic | 35.0% | |
| AGAACAACATTCCTTCCTTT+AGG | + | chr1.1:5133511-5133530 | None:intergenic | 35.0% | |
| AGAAGATGGGAATGAAGAAA+TGG | + | chr1.1:5133232-5133251 | None:intergenic | 35.0% | |
| ATGATTGTGAATAACCCACT+TGG | + | chr1.1:5133374-5133393 | None:intergenic | 35.0% | |
| CAATTCAGGTATGTAGTTTG+CGG | - | chr1.1:5138341-5138360 | MS.gene24509:CDS | 35.0% | |
| CCATGCAAACAATATTTAGG+GGG | + | chr1.1:5136511-5136530 | None:intergenic | 35.0% | |
| GAAAGAATAAGTCACCTTTG+TGG | + | chr1.1:5137043-5137062 | None:intergenic | 35.0% | |
| GCCAGAATAAGCAAAAAAGT+GGG | + | chr1.1:5134534-5134553 | None:intergenic | 35.0% | |
| GCCATGCAAACAATATTTAG+GGG | + | chr1.1:5136512-5136531 | None:intergenic | 35.0% | |
| GGAAAAGAAATTGAGAGTTG+AGG | - | chr1.1:5137005-5137024 | MS.gene24509:intron | 35.0% | |
| GGATATTGAACAAGAAGCTT+TGG | - | chr1.1:5136043-5136062 | MS.gene24509:CDS | 35.0% | |
| GTTAATAAGATCCCTTGCAT+TGG | + | chr1.1:5135973-5135992 | None:intergenic | 35.0% | |
| TACATACCTGAATTGTCCAT+TGG | + | chr1.1:5138336-5138355 | None:intergenic | 35.0% | |
| TATCTTCCTAATTCGCTTAC+AGG | - | chr1.1:5136285-5136304 | MS.gene24509:intron | 35.0% | |
| TATGAAACACGAACACCTTT+GGG | - | chr1.1:5134635-5134654 | MS.gene24509:CDS | 35.0% | |
| TATGAAGATTTAATGTCGGC+TGG | - | chr1.1:5137641-5137660 | MS.gene24509:CDS | 35.0% | |
| TCAAGATGGCAATATCATCA+AGG | + | chr1.1:5136154-5136173 | None:intergenic | 35.0% | |
| TCACTGTCTGTAACAAAGTA+GGG | + | chr1.1:5135803-5135822 | None:intergenic | 35.0% | |
| TCATATGAATAGCAGAAGAG+GGG | - | chr1.1:5135186-5135205 | MS.gene24509:intron | 35.0% | |
| TGGAATCATTGATCCAACAA+AGG | - | chr1.1:5137661-5137680 | MS.gene24509:CDS | 35.0% | |
| TGGCAATATCATCAAGGTAT+TGG | + | chr1.1:5136148-5136167 | None:intergenic | 35.0% | |
| TGTTGAATTTGAGAACTGCA+AGG | - | chr1.1:5135832-5135851 | MS.gene24509:CDS | 35.0% | |
| TTAGCACCAATATTCTCAAC+TGG | + | chr1.1:5134122-5134141 | None:intergenic | 35.0% | |
| TTATAAACCTCCTGTCAAGA+TGG | + | chr1.1:5136168-5136187 | None:intergenic | 35.0% | |
| TTGGTTCAAAATCGGTGAAT+TGG | - | chr1.1:5135019-5135038 | MS.gene24509:CDS | 35.0% | |
| TTTACTCAGACTTGCATCAA+AGG | - | chr1.1:5137167-5137186 | MS.gene24509:intron | 35.0% | |
| ! | ATTAGTTATGTGGGGTGTTT+AGG | - | chr1.1:5133778-5133797 | MS.gene24509:intron | 35.0% |
| ! | ATTTTATAGGTTGTTGCAGC+TGG | - | chr1.1:5134352-5134371 | MS.gene24509:CDS | 35.0% |
| ! | CTGTGTTGTTGTTGAGATAA+AGG | - | chr1.1:5138284-5138303 | MS.gene24509:CDS | 35.0% |
| ! | CTTGTTGTGAACAAACTTAG+AGG | - | chr1.1:5136071-5136090 | MS.gene24509:CDS | 35.0% |
| ! | CTTTCTTTTCTCCTAGGATT+CGG | - | chr1.1:5138637-5138656 | MS.gene24509:CDS | 35.0% |
| ! | TAAGAATGTTTTCGCAACAG+AGG | + | chr1.1:5138256-5138275 | None:intergenic | 35.0% |
| ! | TTAGTTATGTGGGGTGTTTA+GGG | - | chr1.1:5133779-5133798 | MS.gene24509:intron | 35.0% |
| !! | AACTACTACCTCTGTTGTTT+TGG | - | chr1.1:5134190-5134209 | MS.gene24509:CDS | 35.0% |
| !! | CTTAATTTGTGAAACTCGCT+TGG | + | chr1.1:5136445-5136464 | None:intergenic | 35.0% |
| !! | GTTTTGATGTTGGGTGTTTA+GGG | - | chr1.1:5133993-5134012 | MS.gene24509:intron | 35.0% |
| !! | GTTTTGTTACGAGTATAGGT+TGG | - | chr1.1:5136958-5136977 | MS.gene24509:intron | 35.0% |
| !! | TCTTATTGCAGAAGGTGTTA+AGG | - | chr1.1:5134220-5134239 | MS.gene24509:CDS | 35.0% |
| !! | TGCTTGTTGTTACATGATTG+GGG | - | chr1.1:5134307-5134326 | MS.gene24509:intron | 35.0% |
| !! | TTGAGTAAGGTTGGTAGAAA+GGG | - | chr1.1:5135692-5135711 | MS.gene24509:CDS | 35.0% |
| !!! | CCCTATTTTGATAATTGCAG+AGG | - | chr1.1:5136022-5136041 | MS.gene24509:CDS | 35.0% |
| !!! | GGAGTGTTTGTTTTGATGTT+GGG | - | chr1.1:5133984-5134003 | MS.gene24509:intron | 35.0% |
| !!! | GGTAGACTTGTTATGAGTTT+TGG | - | chr1.1:5134241-5134260 | MS.gene24509:intron | 35.0% |
| !!! | TCCCACTTTTTTGCTTATTC+TGG | - | chr1.1:5134530-5134549 | MS.gene24509:intron | 35.0% |
| !!! | TCCTTTTTTGGTTTAGCTGT+TGG | - | chr1.1:5136252-5136271 | MS.gene24509:intron | 35.0% |
| !!! | TGGAGTGTTTGTTTTGATGT+TGG | - | chr1.1:5133983-5134002 | MS.gene24509:intron | 35.0% |
| !!! | TGTTTTGATGTTGGGTGTTT+AGG | - | chr1.1:5133992-5134011 | MS.gene24509:intron | 35.0% |
| !!! | TTCTCCCTTTGTTCCTTTTT+TGG | - | chr1.1:5136240-5136259 | MS.gene24509:intron | 35.0% |
| AAAAGGAGAAGCTGAACGAA+AGG | - | chr1.1:5136804-5136823 | MS.gene24509:intron | 40.0% | |
| ACAAACTGAGACAGAACTCA+AGG | - | chr1.1:5136984-5137003 | MS.gene24509:intron | 40.0% | |
| ACAGTACCTGTAAGCGAATT+AGG | + | chr1.1:5136294-5136313 | None:intergenic | 40.0% | |
| ACTCTTTGGACGTATCTATG+GGG | - | chr1.1:5134776-5134795 | MS.gene24509:intron | 40.0% | |
| ACTGAACCGAACCAAAGATT+TGG | + | chr1.1:5134936-5134955 | None:intergenic | 40.0% | |
| ACTGAAGATTGCAGCACTTA+AGG | - | chr1.1:5136097-5136116 | MS.gene24509:CDS | 40.0% | |
| ACTTCCATCACCAACTATTG+TGG | + | chr1.1:5136406-5136425 | None:intergenic | 40.0% | |
| ATCAAAGGTGGATGCAATCA+AGG | - | chr1.1:5137182-5137201 | MS.gene24509:intron | 40.0% | |
| CAACATGTCTGCATCATGTT+AGG | - | chr1.1:5135513-5135532 | MS.gene24509:CDS | 40.0% | |
| CACTCTTTGGACGTATCTAT+GGG | - | chr1.1:5134775-5134794 | MS.gene24509:intron | 40.0% | |
| CACTTGGAGTTTCTTGATAG+CGG | + | chr1.1:5133358-5133377 | None:intergenic | 40.0% | |
| CCCCCTAAATATTGTTTGCA+TGG | - | chr1.1:5136508-5136527 | MS.gene24509:intron | 40.0% | |
| CGAATCCTAGGAGAAAAGAA+AGG | + | chr1.1:5138639-5138658 | None:intergenic | 40.0% | |
| CGCCAGAATAAGCAAAAAAG+TGG | + | chr1.1:5134535-5134554 | None:intergenic | 40.0% | |
| CTAAATTAGCCCACCCAAAT+TGG | + | chr1.1:5136676-5136695 | None:intergenic | 40.0% | |
| CTAGAGGACGCAATTAGAAA+CGG | - | chr1.1:5135996-5136015 | MS.gene24509:CDS | 40.0% | |
| CTATGAAACACGAACACCTT+TGG | - | chr1.1:5134634-5134653 | MS.gene24509:CDS | 40.0% | |
| CTCACTGTCTGTAACAAAGT+AGG | + | chr1.1:5135804-5135823 | None:intergenic | 40.0% | |
| GAAAGGATTGCAAAACTGTC+TGG | - | chr1.1:5136821-5136840 | MS.gene24509:intron | 40.0% | |
| GACTTAGCTTAGACAAAGCT+GGG | - | chr1.1:5136331-5136350 | MS.gene24509:intron | 40.0% | |
| GAGCTTATAGAACCGGTAAA+AGG | + | chr1.1:5137087-5137106 | None:intergenic | 40.0% | |
| GAGGATCCAGTTGAGAATAT+TGG | - | chr1.1:5134113-5134132 | MS.gene24509:intron | 40.0% | |
| GATGATATTGCCATCTTGAC+AGG | - | chr1.1:5136155-5136174 | MS.gene24509:CDS | 40.0% | |
| GCAAAAAAGTGGGAAGTTTG+AGG | + | chr1.1:5134524-5134543 | None:intergenic | 40.0% | |
| GCTAAGCAATGTAATCCCAA+AGG | + | chr1.1:5134605-5134624 | None:intergenic | 40.0% | |
| GCTATCAAGAAACTCCAAGT+GGG | - | chr1.1:5133357-5133376 | MS.gene24509:intron | 40.0% | |
| GGTAGGAAATATGATAGCTG+AGG | - | chr1.1:5135667-5135686 | MS.gene24509:intron | 40.0% | |
| GTTGTTCTTGAGAGCAAGTA+TGG | - | chr1.1:5133523-5133542 | MS.gene24509:CDS | 40.0% | |
| TAAACAAACACACACCTCTC+TGG | + | chr1.1:5133584-5133603 | None:intergenic | 40.0% | |
| TACGGATATAATGCTGCAAC+TGG | - | chr1.1:5137614-5137633 | MS.gene24509:CDS | 40.0% | |
| TATGATGCACGAATGCCTTT+GGG | - | chr1.1:5134587-5134606 | MS.gene24509:intron | 40.0% | |
| TCTTTGCTTCAACACACCTT+AGG | - | chr1.1:5134752-5134771 | MS.gene24509:intron | 40.0% | |
| TGCAAACAATATTTAGGGGG+TGG | + | chr1.1:5136508-5136527 | None:intergenic | 40.0% | |
| TGTGAACAAGCTTGCAGATT+TGG | - | chr1.1:5133468-5133487 | MS.gene24509:intron | 40.0% | |
| TGTTGAGATAAAGGAACCTG+AGG | - | chr1.1:5138293-5138312 | MS.gene24509:CDS | 40.0% | |
| TTACTCTTGGTCCTAAAGGA+AGG | - | chr1.1:5133497-5133516 | MS.gene24509:intron | 40.0% | |
| TTATAATTAAAACGCGGCGC+AGG | - | chr1.1:5137392-5137411 | MS.gene24509:intron | 40.0% | |
| TTCAACGAGTTCACTGAGAT+GGG | + | chr1.1:5136877-5136896 | None:intergenic | 40.0% | |
| TTGCGTTAAAAAGGTGGAGT+TGG | - | chr1.1:5134091-5134110 | MS.gene24509:intron | 40.0% | |
| TTTCAACGAGTTCACTGAGA+TGG | + | chr1.1:5136878-5136897 | None:intergenic | 40.0% | |
| ! | AACAAGCTTGCAGATTTGGT+TGG | - | chr1.1:5133472-5133491 | MS.gene24509:intron | 40.0% |
| ! | ATAGGGGTGTGCATAAAAAC+CGG | + | chr1.1:5135363-5135382 | None:intergenic | 40.0% |
| ! | ATTAGATGTAGGGGTGTGAA+TGG | - | chr1.1:5134897-5134916 | MS.gene24509:intron | 40.0% |
| ! | ATTTGTTGAAGTGTCACTGC+TGG | - | chr1.1:5137959-5137978 | MS.gene24509:intron | 40.0% |
| ! | TACAGGTACTGTTATCAGAG+AGG | - | chr1.1:5136302-5136321 | MS.gene24509:intron | 40.0% |
| ! | TGGTGCTAAATTGGTTAGAC+AGG | - | chr1.1:5134133-5134152 | MS.gene24509:intron | 40.0% |
| !! | ACAACCACAATAGTTGGTGA+TGG | - | chr1.1:5136399-5136418 | MS.gene24509:intron | 40.0% |
| !! | ATAATGTGCTTGGCTTGGTT+TGG | - | chr1.1:5134276-5134295 | MS.gene24509:intron | 40.0% |
| !! | CAAAGGTGTTCGTGTTTCAT+AGG | + | chr1.1:5134636-5134655 | None:intergenic | 40.0% |
| !! | GATTTGGTTGGTGTTACTCT+TGG | - | chr1.1:5133484-5133503 | MS.gene24509:intron | 40.0% |
| !! | GTTGAGTAAGGTTGGTAGAA+AGG | - | chr1.1:5135691-5135710 | MS.gene24509:CDS | 40.0% |
| !!! | ATATTTTGGCCTGATGGTGT+TGG | - | chr1.1:5136594-5136613 | MS.gene24509:intron | 40.0% |
| !!! | TGCGAAATATTTTGGCCTGA+TGG | - | chr1.1:5136588-5136607 | MS.gene24509:intron | 40.0% |
| !!! | TTTTGGTTTCGCACCAAATG+AGG | - | chr1.1:5137846-5137865 | MS.gene24509:intron | 40.0% |
| AAAGCTGGGAATGAGGTTCT+AGG | - | chr1.1:5136345-5136364 | MS.gene24509:intron | 45.0% | |
| AACACACCTTAGGCACTCTT+TGG | - | chr1.1:5134762-5134781 | MS.gene24509:intron | 45.0% | |
| ACAATATTTAGGGGGTGGAG+AGG | + | chr1.1:5136503-5136522 | None:intergenic | 45.0% | |
| ACTCAGACTTGCATCAAAGG+TGG | - | chr1.1:5137170-5137189 | MS.gene24509:intron | 45.0% | |
| ACTGTTATCAGAGAGGAGGT+TGG | - | chr1.1:5136309-5136328 | MS.gene24509:intron | 45.0% | |
| AGCCGCCAAGACAAATGATT+TGG | - | chr1.1:5134157-5134176 | MS.gene24509:intron | 45.0% | |
| AGGATTGCAAAACTGTCTGG+CGG | - | chr1.1:5136824-5136843 | MS.gene24509:intron | 45.0% | |
| AGGGCCCGCATCATTATAAA+TGG | - | chr1.1:5137787-5137806 | MS.gene24509:intron | 45.0% | |
| AGTGTAGTGTCACACGTAGA+AGG | + | chr1.1:5138118-5138137 | None:intergenic | 45.0% | |
| ATACCACGTGTGATAAGCAC+AGG | + | chr1.1:5134385-5134404 | None:intergenic | 45.0% | |
| CAGAAGAGGGGTTGTGAAAT+GGG | - | chr1.1:5135198-5135217 | MS.gene24509:intron | 45.0% | |
| CGCCAAATCATTTGTCTTGG+CGG | + | chr1.1:5134162-5134181 | None:intergenic | 45.0% | |
| CGCTATCAAGAAACTCCAAG+TGG | - | chr1.1:5133356-5133375 | MS.gene24509:intron | 45.0% | |
| CGTTAAAAAGGTGGAGTTGG+AGG | - | chr1.1:5134094-5134113 | MS.gene24509:intron | 45.0% | |
| CTATGATGCACGAATGCCTT+TGG | - | chr1.1:5134586-5134605 | MS.gene24509:intron | 45.0% | |
| CTTAGACAAAGCTGGGAATG+AGG | - | chr1.1:5136338-5136357 | MS.gene24509:intron | 45.0% | |
| GAAACATCCTACTGTTGTCC+AGG | - | chr1.1:5138203-5138222 | MS.gene24509:intron | 45.0% | |
| GAAATACAACTCCTTGGCCA+TGG | + | chr1.1:5133322-5133341 | None:intergenic | 45.0% | |
| GAAGACAAGCCTAATCCCAA+AGG | + | chr1.1:5134653-5134672 | None:intergenic | 45.0% | |
| GAATCAAACCTGAGACCTTG+AGG | + | chr1.1:5136644-5136663 | None:intergenic | 45.0% | |
| GATATTGCCATCTTGACAGG+AGG | - | chr1.1:5136158-5136177 | MS.gene24509:CDS | 45.0% | |
| GCACTCTTTGGACGTATCTA+TGG | - | chr1.1:5134774-5134793 | MS.gene24509:intron | 45.0% | |
| GGACTTAGCTTAGACAAAGC+TGG | - | chr1.1:5136330-5136349 | MS.gene24509:intron | 45.0% | |
| GGATAGTGAATTGGCTGATG+TGG | - | chr1.1:5135616-5135635 | MS.gene24509:intron | 45.0% | |
| GGTAACCCAATGGACAATTC+AGG | - | chr1.1:5138327-5138346 | MS.gene24509:CDS | 45.0% | |
| GTTGTGGTTGTGTGAATTGC+AGG | - | chr1.1:5135589-5135608 | MS.gene24509:intron | 45.0% | |
| GTTGTGTGAATTGCAGGTTG+AGG | - | chr1.1:5135595-5135614 | MS.gene24509:intron | 45.0% | |
| TACAATACCCTCCTCAACAG+CGG | + | chr1.1:5137130-5137149 | None:intergenic | 45.0% | |
| TACCACGTGTGATAAGCACA+GGG | + | chr1.1:5134384-5134403 | None:intergenic | 45.0% | |
| TAGTGCAGGGAACAATCATG+AGG | - | chr1.1:5135646-5135665 | MS.gene24509:intron | 45.0% | |
| TCCAACGACGATACGAGATA+CGG | - | chr1.1:5137596-5137615 | MS.gene24509:intron | 45.0% | |
| TGGGAATGAAGAAATGGCAG+CGG | + | chr1.1:5133226-5133245 | None:intergenic | 45.0% | |
| TTGTCCATTGGGTTACCAAC+AGG | + | chr1.1:5138324-5138343 | None:intergenic | 45.0% | |
| ! | AGGTACTGTTATCAGAGAGG+AGG | - | chr1.1:5136305-5136324 | MS.gene24509:intron | 45.0% |
| ! | CACTGCTGGACTTTTAACGT+GGG | - | chr1.1:5137973-5137992 | MS.gene24509:intron | 45.0% |
| ! | CGCCAAGACAAATGATTTGG+CGG | - | chr1.1:5134160-5134179 | MS.gene24509:intron | 45.0% |
| ! | CTCTGCCTTTCTTTTCTCCT+AGG | - | chr1.1:5138631-5138650 | MS.gene24509:CDS | 45.0% |
| ! | GCAGGTTGAGGATAGTGAAT+TGG | - | chr1.1:5135607-5135626 | MS.gene24509:intron | 45.0% |
| ! | GCCAAGACAAATGATTTGGC+GGG | - | chr1.1:5134161-5134180 | MS.gene24509:intron | 45.0% |
| ! | GTTGTCTGAGTTTAGGGTCA+AGG | - | chr1.1:5133727-5133746 | MS.gene24509:intron | 45.0% |
| ! | TCACTGCTGGACTTTTAACG+TGG | - | chr1.1:5137972-5137991 | MS.gene24509:intron | 45.0% |
| ! | TCGCTTGGTAACTGCTTCTT+GGG | + | chr1.1:5136430-5136449 | None:intergenic | 45.0% |
| ! | TGGCAGTGTTGTTAGTGAGA+AGG | - | chr1.1:5137485-5137504 | MS.gene24509:intron | 45.0% |
| ! | TTTAGGGTTCCGATTCTTCC+TGG | + | chr1.1:5133292-5133311 | None:intergenic | 45.0% |
| !! | ACACGAACACCTTTGGGATT+AGG | - | chr1.1:5134641-5134660 | MS.gene24509:CDS | 45.0% |
| !! | ATACGTCCAAAGAGTGCCTA+AGG | + | chr1.1:5134771-5134790 | None:intergenic | 45.0% |
| !! | CAAAGGCATTCGTGCATCAT+AGG | + | chr1.1:5134588-5134607 | None:intergenic | 45.0% |
| !! | GGTGTTACTCTTGGTCCTAA+AGG | - | chr1.1:5133493-5133512 | MS.gene24509:intron | 45.0% |
| !! | GTTGAGGAGGGTATTGTAGT+TGG | - | chr1.1:5137132-5137151 | MS.gene24509:intron | 45.0% |
| !!! | ACCTCTGTTGTTTTGGCTCA+GGG | - | chr1.1:5134197-5134216 | MS.gene24509:CDS | 45.0% |
| !!! | TACCTCTGTTGTTTTGGCTC+AGG | - | chr1.1:5134196-5134215 | MS.gene24509:CDS | 45.0% |
| !!! | TTAAAATTTTAAAAACAATT+TGG | + | chr1.1:5135257-5135276 | None:intergenic | 5.0% |
| !!! | TTGTTTTTAAAATTTTAAAT+TGG | - | chr1.1:5135259-5135278 | MS.gene24509:intron | 5.0% |
| AACCCTGTGCTTATCACACG+TGG | - | chr1.1:5134379-5134398 | MS.gene24509:CDS | 50.0% | |
| AATTAAAACGCGGCGCAGGT+TGG | - | chr1.1:5137396-5137415 | MS.gene24509:CDS | 50.0% | |
| ACACACACACACACACACAC+CGG | - | chr1.1:5135456-5135475 | MS.gene24509:CDS | 50.0% | |
| ACATCCTACTGTTGTCCAGG+TGG | - | chr1.1:5138206-5138225 | MS.gene24509:intron | 50.0% | |
| ACCCTGAGCCAAAACAACAG+AGG | + | chr1.1:5134201-5134220 | None:intergenic | 50.0% | |
| ATACAACTCCTTGGCCATGG+CGG | + | chr1.1:5133319-5133338 | None:intergenic | 50.0% | |
| ATATTTAGGGGGTGGAGAGG+CGG | + | chr1.1:5136500-5136519 | None:intergenic | 50.0% | |
| ATCTTTGGTGAGCACCACCT+TGG | + | chr1.1:5136379-5136398 | None:intergenic | 50.0% | |
| ATGTGGCAGCAGTTAGTGCA+GGG | - | chr1.1:5135633-5135652 | MS.gene24509:intron | 50.0% | |
| ATTGCAGCACTTAAGGCTCC+TGG | - | chr1.1:5136104-5136123 | MS.gene24509:CDS | 50.0% | |
| CTCTTGCGTTCTCCAAATCC+AGG | + | chr1.1:5136125-5136144 | None:intergenic | 50.0% | |
| GAATGAAGAAATGGCAGCGG+AGG | + | chr1.1:5133223-5133242 | None:intergenic | 50.0% | |
| GAGAGGGGGAAACCTCAATT+TGG | + | chr1.1:5136470-5136489 | None:intergenic | 50.0% | |
| GCACTTAAGGCTCCTGGATT+TGG | - | chr1.1:5136110-5136129 | MS.gene24509:CDS | 50.0% | |
| GCAGAAGAGGGGTTGTGAAA+TGG | - | chr1.1:5135197-5135216 | MS.gene24509:intron | 50.0% | |
| GCAGGGAACAATCATGAGGT+AGG | - | chr1.1:5135650-5135669 | MS.gene24509:intron | 50.0% | |
| GCCCGCCAAATCATTTGTCT+TGG | + | chr1.1:5134165-5134184 | None:intergenic | 50.0% | |
| GGACGCTCTTAATGCCACAA+AGG | - | chr1.1:5137026-5137045 | MS.gene24509:intron | 50.0% | |
| GTCTCAGGTTTGATTCTCCG+CGG | - | chr1.1:5136648-5136667 | MS.gene24509:intron | 50.0% | |
| TCAAACCTGAGACCTTGAGG+AGG | + | chr1.1:5136641-5136660 | None:intergenic | 50.0% | |
| TCCGTATCTCGTATCGTCGT+TGG | + | chr1.1:5137600-5137619 | None:intergenic | 50.0% | |
| TCGCTCTCACCAGGAAGAAT+CGG | - | chr1.1:5133280-5133299 | MS.gene24509:intron | 50.0% | |
| TTACTTTCAGGCCGCTGTTG+AGG | - | chr1.1:5137116-5137135 | MS.gene24509:intron | 50.0% | |
| ! | ACAAATGATTTGGCGGGCGA+TGG | - | chr1.1:5134167-5134186 | MS.gene24509:CDS | 50.0% |
| ! | ATTCTCCGCGGTGCCAATTT+GGG | - | chr1.1:5136660-5136679 | MS.gene24509:intron | 50.0% |
| ! | CGTTGCTGGTGGTTTTTCTG+CGG | + | chr1.1:5133260-5133279 | None:intergenic | 50.0% |
| ! | CTCGCTTGGTAACTGCTTCT+TGG | + | chr1.1:5136431-5136450 | None:intergenic | 50.0% |
| ! | GAGGGCATGCAATTTGATCG+AGG | - | chr1.1:5135767-5135786 | MS.gene24509:CDS | 50.0% |
| ! | GTGGGGTGTTTGCTTTGATG+CGG | - | chr1.1:5133905-5133924 | MS.gene24509:intron | 50.0% |
| ! | GTTGCTGGTGGTTTTTCTGC+GGG | + | chr1.1:5133259-5133278 | None:intergenic | 50.0% |
| !! | AAAGGGTGTCGTGACACTTG+AGG | - | chr1.1:5135709-5135728 | MS.gene24509:CDS | 50.0% |
| !! | AGGGTATTGTAGTTGGCGGT+GGG | - | chr1.1:5137139-5137158 | MS.gene24509:intron | 50.0% |
| !! | GAATGAGGTTCTAGGCACTG+CGG | - | chr1.1:5136353-5136372 | MS.gene24509:intron | 50.0% |
| !! | GAGGAGGGTATTGTAGTTGG+CGG | - | chr1.1:5137135-5137154 | MS.gene24509:intron | 50.0% |
| !! | GATAGCTGAGGCGTTGAGTA+AGG | - | chr1.1:5135679-5135698 | MS.gene24509:CDS | 50.0% |
| !! | GCTCAGGGTCTTATTGCAGA+AGG | - | chr1.1:5134212-5134231 | MS.gene24509:CDS | 50.0% |
| !! | GTGCTTGGCTTGGTTTGGTT+TGG | - | chr1.1:5134281-5134300 | MS.gene24509:intron | 50.0% |
| !! | TGCACCTGTTGGTAACCCAA+TGG | - | chr1.1:5138317-5138336 | MS.gene24509:CDS | 50.0% |
| AAATGGCAGCGGAGGAAGAG+AGG | + | chr1.1:5133215-5133234 | None:intergenic | 55.0% | |
| CCAAGCAACATCTGACCACC+TGG | + | chr1.1:5138224-5138243 | None:intergenic | 55.0% | |
| CCAGGTGGTCAGATGTTGCT+TGG | - | chr1.1:5138221-5138240 | MS.gene24509:intron | 55.0% | |
| CTGACCACCTGGACAACAGT+AGG | + | chr1.1:5138213-5138232 | None:intergenic | 55.0% | |
| GAACCCTAAAGTCTCCGCCA+TGG | - | chr1.1:5133302-5133321 | MS.gene24509:intron | 55.0% | |
| GATGTGGCAGCAGTTAGTGC+AGG | - | chr1.1:5135632-5135651 | MS.gene24509:intron | 55.0% | |
| GGAGGAAGAGAGGTTGCATG+AGG | + | chr1.1:5133205-5133224 | None:intergenic | 55.0% | |
| TAAAGTCTCCGCCATGGCCA+AGG | - | chr1.1:5133308-5133327 | MS.gene24509:intron | 55.0% | |
| TATTTAGGGGGTGGAGAGGC+GGG | + | chr1.1:5136499-5136518 | None:intergenic | 55.0% | |
| TCGTGACACTTGAGGAGGGA+AGG | - | chr1.1:5135717-5135736 | MS.gene24509:CDS | 55.0% | |
| TGCAAAACTGTCTGGCGGTG+TGG | - | chr1.1:5136829-5136848 | MS.gene24509:intron | 55.0% | |
| TGGCGGTGTGGCTGTAATTC+AGG | - | chr1.1:5136841-5136860 | MS.gene24509:intron | 55.0% | |
| TTACCAACAGGTGCAGCCTC+AGG | + | chr1.1:5138312-5138331 | None:intergenic | 55.0% | |
| TTCTGCGGGCGGAAGAAGAT+GGG | + | chr1.1:5133245-5133264 | None:intergenic | 55.0% | |
| TTGGAGTGTGCTCCTCCTCA+AGG | - | chr1.1:5136626-5136645 | MS.gene24509:intron | 55.0% | |
| TTTCAGGCCGCTGTTGAGGA+GGG | - | chr1.1:5137120-5137139 | MS.gene24509:intron | 55.0% | |
| TTTCTGCGGGCGGAAGAAGA+TGG | + | chr1.1:5133246-5133265 | None:intergenic | 55.0% | |
| ! | GATTCTCCGCGGTGCCAATT+TGG | - | chr1.1:5136659-5136678 | MS.gene24509:intron | 55.0% |
| ! | GGTGTCGTGACACTTGAGGA+GGG | - | chr1.1:5135713-5135732 | MS.gene24509:CDS | 55.0% |
| ! | TGGCCATGGCGGAGACTTTA+GGG | + | chr1.1:5133308-5133327 | None:intergenic | 55.0% |
| ! | TTGAGGAGGAGCACACTCCA+AGG | + | chr1.1:5136627-5136646 | None:intergenic | 55.0% |
| ! | TTGGCCATGGCGGAGACTTT+AGG | + | chr1.1:5133309-5133328 | None:intergenic | 55.0% |
| !! | ATGGTGTTGGCTTGGGACCT+TGG | - | chr1.1:5136607-5136626 | MS.gene24509:intron | 55.0% |
| !! | GAGGGTATTGTAGTTGGCGG+TGG | - | chr1.1:5137138-5137157 | MS.gene24509:intron | 55.0% |
| !! | GCTGAGGCGTTGAGTAAGGT+TGG | - | chr1.1:5135683-5135702 | MS.gene24509:CDS | 55.0% |
| !! | TGGCCTGATGGTGTTGGCTT+GGG | - | chr1.1:5136600-5136619 | MS.gene24509:intron | 55.0% |
| !! | TGGTGTCACTGTTGCCAGAG+AGG | - | chr1.1:5133567-5133586 | MS.gene24509:CDS | 55.0% |
| !! | TTGGCCTGATGGTGTTGGCT+TGG | - | chr1.1:5136599-5136618 | MS.gene24509:intron | 55.0% |
| AGAGGCGGGGAAAGAGAGAG+GGG | + | chr1.1:5136485-5136504 | None:intergenic | 60.0% | |
| ATTTAGGGGGTGGAGAGGCG+GGG | + | chr1.1:5136498-5136517 | None:intergenic | 60.0% | |
| CTTTCAGGCCGCTGTTGAGG+AGG | - | chr1.1:5137119-5137138 | MS.gene24509:intron | 60.0% | |
| GAACCTGAGGCTGCACCTGT+TGG | - | chr1.1:5138306-5138325 | MS.gene24509:CDS | 60.0% | |
| GAGAGGCGGGGAAAGAGAGA+GGG | + | chr1.1:5136486-5136505 | None:intergenic | 60.0% | |
| GGTCCCAAGCCAACACCATC+AGG | + | chr1.1:5136606-5136625 | None:intergenic | 60.0% | |
| GTGCTCCTCCTCAAGGTCTC+AGG | - | chr1.1:5136633-5136652 | MS.gene24509:intron | 60.0% | |
| TGTCGTGCAACGACGCACGT+CGG | + | chr1.1:5134680-5134699 | None:intergenic | 60.0% | |
| ! | GCTGGTGGTTTTTCTGCGGG+CGG | + | chr1.1:5133256-5133275 | None:intergenic | 60.0% |
| ! | GGGTGTCGTGACACTTGAGG+AGG | - | chr1.1:5135712-5135731 | MS.gene24509:CDS | 60.0% |
| ! | TCCGCGGTGCCAATTTGGGT+GGG | - | chr1.1:5136664-5136683 | MS.gene24509:intron | 60.0% |
| CCAGCAACGTCGCTCTCACC+AGG | - | chr1.1:5133271-5133290 | MS.gene24509:intron | 65.0% | |
| CCTGGTGAGAGCGACGTTGC+TGG | + | chr1.1:5133274-5133293 | None:intergenic | 65.0% | |
| GAGGCGGGGAAAGAGAGAGG+GGG | + | chr1.1:5136484-5136503 | None:intergenic | 65.0% | |
| GCCCACCCAAATTGGCACCG+CGG | + | chr1.1:5136668-5136687 | None:intergenic | 65.0% | |
| GGAGAGGCGGGGAAAGAGAG+AGG | + | chr1.1:5136487-5136506 | None:intergenic | 65.0% | |
| GGTGAGAGCGACGTTGCTGG+TGG | + | chr1.1:5133271-5133290 | None:intergenic | 65.0% | |
| ! | CTCCGCGGTGCCAATTTGGG+TGG | - | chr1.1:5136663-5136682 | MS.gene24509:intron | 65.0% |
| ! | TCTAGGCACTGCGGCCAAGG+TGG | - | chr1.1:5136362-5136381 | MS.gene24509:intron | 65.0% |
| !! | GGTTCTAGGCACTGCGGCCA+AGG | - | chr1.1:5136359-5136378 | MS.gene24509:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 5133183 | 5138666 | 5133183 | ID=MS.gene24509 |
| chr1.1 | mRNA | 5133183 | 5138666 | 5133183 | ID=MS.gene24509.t1;Parent=MS.gene24509 |
| chr1.1 | exon | 5138475 | 5138666 | 5138475 | ID=MS.gene24509.t1.exon1;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5138475 | 5138666 | 5138475 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5138261 | 5138386 | 5138261 | ID=MS.gene24509.t1.exon2;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5138261 | 5138386 | 5138261 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5137608 | 5137745 | 5137608 | ID=MS.gene24509.t1.exon3;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5137608 | 5137745 | 5137608 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5137393 | 5137488 | 5137393 | ID=MS.gene24509.t1.exon4;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5137393 | 5137488 | 5137393 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5135996 | 5136238 | 5135996 | ID=MS.gene24509.t1.exon5;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5135996 | 5136238 | 5135996 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5135670 | 5135904 | 5135670 | ID=MS.gene24509.t1.exon6;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5135670 | 5135904 | 5135670 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5135373 | 5135542 | 5135373 | ID=MS.gene24509.t1.exon7;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5135373 | 5135542 | 5135373 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5134987 | 5135064 | 5134987 | ID=MS.gene24509.t1.exon8;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5134987 | 5135064 | 5134987 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5134802 | 5134873 | 5134802 | ID=MS.gene24509.t1.exon9;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5134802 | 5134873 | 5134802 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5134619 | 5134723 | 5134619 | ID=MS.gene24509.t1.exon10;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5134619 | 5134723 | 5134619 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5134343 | 5134435 | 5134343 | ID=MS.gene24509.t1.exon11;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5134343 | 5134435 | 5134343 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5134167 | 5134259 | 5134167 | ID=MS.gene24509.t1.exon12;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5134167 | 5134259 | 5134167 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5133501 | 5133624 | 5133501 | ID=MS.gene24509.t1.exon13;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5133501 | 5133624 | 5133501 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| chr1.1 | exon | 5133183 | 5133196 | 5133183 | ID=MS.gene24509.t1.exon14;Parent=MS.gene24509.t1 |
| chr1.1 | CDS | 5133183 | 5133196 | 5133183 | ID=cds.MS.gene24509.t1;Parent=MS.gene24509.t1 |
| Gene Sequence |
| Protein sequence |
