Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045864.t1 | GAU51506.1 | 91.1 | 541 | 48 | 0 | 1 | 541 | 37 | 577 | 1.50E-275 | 958.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045864.t1 | Q9C667 | 74.9 | 530 | 133 | 0 | 2 | 531 | 40 | 569 | 2.9e-227 | 789.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045864.t1 | A0A2Z6P6W4 | 91.1 | 541 | 48 | 0 | 1 | 541 | 37 | 577 | 1.1e-275 | 958.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045864 | MS.gene21355 | PPI |
| MS.gene045864 | MS.gene005698 | PPI |
| MS.gene045864 | MS.gene00537 | PPI |
| MS.gene045864 | MS.gene00538 | PPI |
| MS.gene045864 | MS.gene21042 | PPI |
| MS.gene005697 | MS.gene045864 | PPI |
| MS.gene045864 | MS.gene051662 | PPI |
| MS.gene045864 | MS.gene21581 | PPI |
| MS.gene045864 | MS.gene011205 | PPI |
| MS.gene56417 | MS.gene045864 | PPI |
| MS.gene045864 | MS.gene006906 | PPI |
| MS.gene045864 | MS.gene24508 | PPI |
| MS.gene051663 | MS.gene045864 | PPI |
| MS.gene07775 | MS.gene045864 | PPI |
| MS.gene045864 | MS.gene21583 | PPI |
| MS.gene067554 | MS.gene045864 | PPI |
| MS.gene007699 | MS.gene045864 | PPI |
| MS.gene045864 | MS.gene20999 | PPI |
| MS.gene08738 | MS.gene045864 | PPI |
| MS.gene045864 | MS.gene08674 | PPI |
| MS.gene045864 | MS.gene66497 | PPI |
| MS.gene37341 | MS.gene045864 | PPI |
| MS.gene66498 | MS.gene045864 | PPI |
| MS.gene045864 | MS.gene005332 | PPI |
| MS.gene045864 | MS.gene40766 | PPI |
| MS.gene045864 | MS.gene24509 | PPI |
| MS.gene045864 | MS.gene050099 | PPI |
| MS.gene045864 | MS.gene21357 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045864.t1 | MTR_1g017380 | 67.025 | 558 | 169 | 2 | 1 | 558 | 46 | 588 | 0.0 | 757 |
| MS.gene045864.t1 | MTR_1g017390 | 67.025 | 558 | 169 | 2 | 1 | 558 | 46 | 588 | 0.0 | 756 |
| MS.gene045864.t1 | MTR_4g057970 | 45.772 | 544 | 285 | 5 | 2 | 544 | 49 | 583 | 4.81e-167 | 487 |
| MS.gene045864.t1 | MTR_1g090140 | 44.129 | 528 | 287 | 3 | 17 | 543 | 47 | 567 | 7.89e-154 | 453 |
| MS.gene045864.t1 | MTR_1g090130 | 44.618 | 511 | 280 | 2 | 17 | 526 | 47 | 555 | 2.02e-151 | 447 |
| MS.gene045864.t1 | MTR_4g084130 | 44.423 | 520 | 282 | 6 | 17 | 533 | 54 | 569 | 1.54e-149 | 442 |
| MS.gene045864.t1 | MTR_8g017080 | 40.809 | 544 | 312 | 5 | 1 | 540 | 34 | 571 | 5.50e-139 | 415 |
| MS.gene045864.t1 | MTR_4g084130 | 44.858 | 457 | 246 | 5 | 80 | 533 | 4 | 457 | 1.16e-130 | 390 |
| MS.gene045864.t1 | MTR_0991s0010 | 72.143 | 140 | 39 | 0 | 1 | 140 | 46 | 185 | 3.08e-62 | 203 |
| MS.gene045864.t1 | MTR_5g087560 | 21.682 | 535 | 342 | 17 | 24 | 524 | 35 | 526 | 1.41e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045864.t1 | AT1G26230 | 71.986 | 564 | 144 | 2 | 2 | 551 | 40 | 603 | 0.0 | 828 |
| MS.gene045864.t1 | AT1G26230 | 72.395 | 547 | 137 | 2 | 19 | 551 | 5 | 551 | 0.0 | 805 |
| MS.gene045864.t1 | AT1G26230 | 72.376 | 543 | 136 | 2 | 23 | 551 | 1 | 543 | 0.0 | 798 |
| MS.gene045864.t1 | AT1G55490 | 67.161 | 539 | 176 | 1 | 2 | 540 | 56 | 593 | 0.0 | 745 |
| MS.gene045864.t1 | AT1G55490 | 67.161 | 539 | 176 | 1 | 2 | 540 | 56 | 593 | 0.0 | 745 |
| MS.gene045864.t1 | AT1G55490 | 67.161 | 539 | 176 | 1 | 2 | 540 | 56 | 593 | 0.0 | 745 |
| MS.gene045864.t1 | AT1G55490 | 67.161 | 539 | 176 | 1 | 2 | 540 | 56 | 593 | 0.0 | 745 |
| MS.gene045864.t1 | AT1G55490 | 67.161 | 539 | 176 | 1 | 2 | 540 | 56 | 593 | 0.0 | 745 |
| MS.gene045864.t1 | AT3G13470 | 67.347 | 539 | 175 | 1 | 2 | 540 | 52 | 589 | 0.0 | 742 |
| MS.gene045864.t1 | AT1G26230 | 76.596 | 470 | 110 | 0 | 2 | 471 | 40 | 509 | 0.0 | 741 |
| MS.gene045864.t1 | AT5G56500 | 66.419 | 539 | 181 | 0 | 2 | 540 | 52 | 590 | 0.0 | 729 |
| MS.gene045864.t1 | AT5G56500 | 66.419 | 539 | 181 | 0 | 2 | 540 | 52 | 590 | 0.0 | 729 |
| MS.gene045864.t1 | AT1G26230 | 76.923 | 403 | 93 | 0 | 2 | 404 | 40 | 442 | 0.0 | 639 |
| MS.gene045864.t1 | AT2G28000 | 46.095 | 525 | 278 | 4 | 3 | 526 | 49 | 569 | 1.66e-164 | 481 |
| MS.gene045864.t1 | AT3G23990 | 43.640 | 511 | 285 | 2 | 17 | 526 | 46 | 554 | 2.08e-148 | 439 |
| MS.gene045864.t1 | AT2G33210 | 42.966 | 526 | 295 | 3 | 2 | 526 | 34 | 555 | 5.53e-147 | 436 |
| MS.gene045864.t1 | AT2G33210 | 42.776 | 526 | 291 | 4 | 2 | 526 | 34 | 550 | 1.17e-143 | 427 |
| MS.gene045864.t1 | AT3G13860 | 41.495 | 535 | 304 | 4 | 2 | 533 | 33 | 561 | 5.30e-143 | 425 |
| MS.gene045864.t1 | AT5G18820 | 41.133 | 547 | 309 | 6 | 2 | 546 | 35 | 570 | 1.62e-131 | 395 |
| MS.gene045864.t1 | AT5G18820 | 41.239 | 468 | 265 | 4 | 81 | 546 | 5 | 464 | 1.00e-110 | 338 |
| MS.gene045864.t1 | AT5G18820 | 40.945 | 381 | 221 | 3 | 2 | 381 | 35 | 412 | 3.93e-87 | 277 |
| MS.gene045864.t1 | AT3G11830 | 25.000 | 496 | 287 | 20 | 24 | 484 | 35 | 480 | 6.51e-13 | 71.6 |
| MS.gene045864.t1 | AT3G11830 | 24.848 | 495 | 287 | 20 | 24 | 484 | 35 | 478 | 3.33e-12 | 69.7 |
Find 115 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTACCTTGGTTGCATTTA+AGG | 0.133783 | 5.3:+40596879 | None:intergenic |
| GCTATTAAGGCTCCTGCTTT+TGG | 0.153958 | 5.3:-40598307 | MS.gene045864:CDS |
| GCAGATGATAACATGAATTT+TGG | 0.174735 | 5.3:-40596157 | MS.gene045864:CDS |
| CCCTCTGCAACTATCAAAAT+TGG | 0.234800 | 5.3:+40598394 | None:intergenic |
| GAAAGGATAGCAAGATTATC+AGG | 0.265173 | 5.3:-40597091 | MS.gene045864:CDS |
| AATATGTTCAGAAGCTCTTT+TGG | 0.267990 | 5.3:+40598442 | None:intergenic |
| TTCTCCATCATTTACTATCC+TGG | 0.274149 | 5.3:+40599984 | None:intergenic |
| ATGGTTGAAATAAAGATCTT+TGG | 0.283879 | 5.3:+40600227 | None:intergenic |
| GCTTAAGGTTGCTGCTATTA+AGG | 0.285891 | 5.3:-40598320 | MS.gene045864:CDS |
| GAATTAGTCATGGGCATTCT+AGG | 0.289012 | 5.3:+40595814 | None:intergenic |
| AATATTTAGTATACCTTTGT+TGG | 0.289037 | 5.3:+40596079 | None:intergenic |
| GCCATCACCAACTAAGATAT+TGG | 0.320538 | 5.3:+40599644 | None:intergenic |
| TCTCAATCCCACGAGCAATT+TGG | 0.323052 | 5.3:+40599255 | None:intergenic |
| TACTGTAATAAGAGAAGATA+TGG | 0.324638 | 5.3:-40597406 | MS.gene045864:CDS |
| GGAGAATGTTGGGGTTAAAT+TGG | 0.330128 | 5.3:-40599688 | MS.gene045864:CDS |
| GGCATAGCCATGGGCTTTCT+AGG | 0.333642 | 5.3:+40595835 | None:intergenic |
| TAAACTTAGGGGTGTGCTTA+AGG | 0.354930 | 5.3:-40598335 | MS.gene045864:CDS |
| AGAATGCCCATGACTAATTC+AGG | 0.357212 | 5.3:-40595811 | MS.gene045864:intron |
| CTCTTGTAGGTTATTGCAGC+TGG | 0.366669 | 5.3:-40599290 | MS.gene045864:intron |
| CCTTCTTGGATAGTCTTAGA+AGG | 0.370600 | 5.3:+40596741 | None:intergenic |
| GGAGTAGTGACAATTGAAAA+AGG | 0.378105 | 5.3:-40598692 | MS.gene045864:CDS |
| AAGATCCATTGGAGAATGTT+GGG | 0.381308 | 5.3:-40599698 | MS.gene045864:CDS |
| GAAAATTGGTGCAGGTTGTT+AGG | 0.385076 | 5.3:-40595972 | MS.gene045864:intron |
| GAAGATATTGCCATCTTGAC+TGG | 0.394235 | 5.3:-40598262 | MS.gene045864:CDS |
| TTATTAATTTCAGATTGAAT+TGG | 0.397182 | 5.3:-40599721 | MS.gene045864:intron |
| AATAGTCTAGAGATTGTAGA+AGG | 0.400336 | 5.3:-40598656 | MS.gene045864:CDS |
| TCTCCATCATTTACTATCCT+GGG | 0.409620 | 5.3:+40599985 | None:intergenic |
| GTTGTGTTGCACAACAAGTA+TGG | 0.420099 | 5.3:-40600012 | MS.gene045864:CDS |
| GAGCTGCTTGGTGTTACATT+GGG | 0.422685 | 5.3:-40600051 | MS.gene045864:CDS |
| TGGTGTTACATTGGGTCCTA+AGG | 0.423035 | 5.3:-40600043 | MS.gene045864:CDS |
| CTTCGATCGGTGACGAAGTA+GGG | 0.424516 | 5.3:+40598605 | None:intergenic |
| ACATCTGTTGTTCTTGCTCA+TGG | 0.432656 | 5.3:-40599615 | MS.gene045864:CDS |
| TTGCATAAAGTAGGAAGAAA+AGG | 0.444825 | 5.3:-40598713 | MS.gene045864:CDS |
| GATTGAATTGGAAGATCCAT+TGG | 0.446903 | 5.3:-40599709 | MS.gene045864:CDS |
| AATTTATATTACCTTAAGAA+TGG | 0.448885 | 5.3:+40597060 | None:intergenic |
| TACTGTCATCTTTCTTCGAT+CGG | 0.449682 | 5.3:+40598592 | None:intergenic |
| TACTCCCATCAGTGACTAGT+AGG | 0.452379 | 5.3:+40597310 | None:intergenic |
| TCTTCGATCGGTGACGAAGT+AGG | 0.456122 | 5.3:+40598604 | None:intergenic |
| CCTGGACAATGAAGAGCAAA+AGG | 0.470185 | 5.3:-40596699 | MS.gene045864:intron |
| GATCTTTATTTCAACCATGA+TGG | 0.471267 | 5.3:-40600222 | MS.gene045864:CDS |
| AACATTGCAGGCAGCAATTG+AGG | 0.471687 | 5.3:-40596792 | MS.gene045864:intron |
| GACTTAGTGGCAGAGCTGCT+TGG | 0.472024 | 5.3:-40600063 | MS.gene045864:CDS |
| AAAAGAAGATATTGAATGAA+AGG | 0.474163 | 5.3:-40597108 | MS.gene045864:CDS |
| GAAGATCCATTGGAGAATGT+TGG | 0.476886 | 5.3:-40599699 | MS.gene045864:CDS |
| GTAGGCAGGGGTGGACTTAG+TGG | 0.480322 | 5.3:-40600076 | MS.gene045864:intron |
| ACAAACACAAGTAGAGTTGA+AGG | 0.480475 | 5.3:-40596926 | MS.gene045864:CDS |
| ATGGGCTTTCTACGTTGTAA+TGG | 0.483727 | 5.3:+40595865 | None:intergenic |
| ATTGAGGAAGGTGTAGTAGT+TGG | 0.497962 | 5.3:-40596776 | MS.gene045864:CDS |
| GTTAAATTGGTGAGACAAGC+TGG | 0.504045 | 5.3:-40599675 | MS.gene045864:CDS |
| GGCTTTCTAGGCATAGCCAT+GGG | 0.508926 | 5.3:+40595847 | None:intergenic |
| ACCAATATCTTAGTTGGTGA+TGG | 0.509209 | 5.3:-40599645 | MS.gene045864:CDS |
| ATCCCACGAGCAATTTGGAC+AGG | 0.510632 | 5.3:+40599260 | None:intergenic |
| AGAGCTGCTTGGTGTTACAT+TGG | 0.512060 | 5.3:-40600052 | MS.gene045864:CDS |
| CTAGAGAAGCAATTGAAAAG+AGG | 0.512949 | 5.3:-40597287 | MS.gene045864:CDS |
| TCAAATTAAGATCCTTGTTG+AGG | 0.513328 | 5.3:-40597259 | MS.gene045864:intron |
| TCTCATGAAGGCTAGAATCA+TGG | 0.516872 | 5.3:-40596104 | MS.gene045864:CDS |
| CTCTTGCGTTCCCCAAAAGC+AGG | 0.519386 | 5.3:+40598295 | None:intergenic |
| TGATACAAGAAGCTTCTTTG+TGG | 0.525215 | 5.3:+40600194 | None:intergenic |
| TGGCAATGTTGTCATAGATA+AGG | 0.527203 | 5.3:-40596301 | MS.gene045864:intron |
| TCTAATACCTGAATTAGTCA+TGG | 0.529536 | 5.3:+40595804 | None:intergenic |
| TCTGAGGCTTTGCATAAAGT+AGG | 0.532283 | 5.3:-40598722 | MS.gene045864:CDS |
| GCAGGGAACGATTATGTTGT+CGG | 0.534522 | 5.3:-40598755 | MS.gene045864:CDS |
| AACACAACATTTCTTCCCTT+AGG | 0.534711 | 5.3:+40600027 | None:intergenic |
| TCTTTGTGGTTGAACCATCA+TGG | 0.536125 | 5.3:+40600208 | None:intergenic |
| AGAACCAAGCACATCCGTGC+TGG | 0.538805 | 5.3:+40597365 | None:intergenic |
| CTTTGCGGTGTAGGCAGGGG+TGG | 0.538867 | 5.3:-40600085 | MS.gene045864:intron |
| CTTAATCAAAGAGGGAATGA+AGG | 0.545189 | 5.3:-40599592 | MS.gene045864:intron |
| AAAGCCAGCACGGATGTGCT+TGG | 0.551613 | 5.3:-40597369 | MS.gene045864:CDS |
| AGTTGCAGAGGGAATTGAGC+AGG | 0.552599 | 5.3:-40598383 | MS.gene045864:CDS |
| TAGAGAAGCAATTGAAAAGA+GGG | 0.557169 | 5.3:-40597286 | MS.gene045864:CDS |
| TGCTCATGGCTTAATCAAAG+AGG | 0.559327 | 5.3:-40599601 | MS.gene045864:CDS |
| TATAGAGCATGCAGCTTCTG+TGG | 0.561462 | 5.3:-40595944 | MS.gene045864:CDS |
| GAAGGTGTAGTAGTTGGTGG+TGG | 0.561709 | 5.3:-40596770 | MS.gene045864:CDS |
| CCACCCAGGATAGTAAATGA+TGG | 0.563310 | 5.3:-40599988 | MS.gene045864:CDS |
| CTAATACCTGAATTAGTCAT+GGG | 0.563335 | 5.3:+40595805 | None:intergenic |
| TCTACCCTACTAGTCACTGA+TGG | 0.564415 | 5.3:-40597315 | MS.gene045864:CDS |
| TCTTATACCTCCAGTCAAGA+TGG | 0.565620 | 5.3:+40598252 | None:intergenic |
| TGCTGCTAGAGACTGTTATG+AGG | 0.567003 | 5.3:-40596128 | MS.gene045864:CDS |
| TGGAGAAACTGTTCTCAAAG+AGG | 0.567318 | 5.3:-40599968 | MS.gene045864:intron |
| GGGCTTTCTAGGCATAGCCA+TGG | 0.567432 | 5.3:+40595846 | None:intergenic |
| GACAACATTGCCATTTACAC+CGG | 0.568042 | 5.3:+40596311 | None:intergenic |
| TGCTGTTGTGATTGACCGCA+TGG | 0.570375 | 5.3:-40595899 | MS.gene045864:CDS |
| GGTGTTACATTGGGTCCTAA+GGG | 0.572289 | 5.3:-40600042 | MS.gene045864:CDS |
| GCTCATGGCTTAATCAAAGA+GGG | 0.577420 | 5.3:-40599600 | MS.gene045864:CDS |
| TATGTTGCAGAAGTCAGCGC+AGG | 0.579617 | 5.3:-40598773 | MS.gene045864:CDS |
| CTGTTATGAGGATCTCATGA+AGG | 0.584426 | 5.3:-40596116 | MS.gene045864:CDS |
| TTAACCCCAACATTCTCCAA+TGG | 0.585067 | 5.3:+40599693 | None:intergenic |
| GGGCATTCTAGGCATAGCCA+TGG | 0.589080 | 5.3:+40595825 | None:intergenic |
| ACTCCCATCAGTGACTAGTA+GGG | 0.589248 | 5.3:+40597311 | None:intergenic |
| AAAGGATAGCAAGATTATCA+GGG | 0.602789 | 5.3:-40597090 | MS.gene045864:CDS |
| CTACCCTACTAGTCACTGAT+GGG | 0.603767 | 5.3:-40597314 | MS.gene045864:CDS |
| GAGGAAGGTGTAGTAGTTGG+TGG | 0.604792 | 5.3:-40596773 | MS.gene045864:CDS |
| AATCCTGTCCAAATTGCTCG+TGG | 0.610174 | 5.3:-40599263 | MS.gene045864:CDS |
| GGCTATGCCTAGAAAGCCCA+TGG | 0.611650 | 5.3:-40595842 | MS.gene045864:CDS |
| TGTCGGAAACATGATTTCTG+AGG | 0.613481 | 5.3:-40598738 | MS.gene045864:CDS |
| CCTTCTAAGACTATCCAAGA+AGG | 0.614465 | 5.3:-40596741 | MS.gene045864:CDS |
| ACTGTAATAAGAGAAGATAT+GGG | 0.620581 | 5.3:-40597405 | MS.gene045864:CDS |
| TTGTGTTGCACAACAAGTAT+GGG | 0.623105 | 5.3:-40600011 | MS.gene045864:CDS |
| AGATCCATTGGAGAATGTTG+GGG | 0.623470 | 5.3:-40599697 | MS.gene045864:CDS |
| GGCATTCTAGGCATAGCCAT+GGG | 0.628138 | 5.3:+40595826 | None:intergenic |
| TCTAAGACTATCCAAGAAGG+TGG | 0.633828 | 5.3:-40596738 | MS.gene045864:CDS |
| TTGCAGGCAGCAATTGAGGA+AGG | 0.634346 | 5.3:-40596788 | MS.gene045864:intron |
| ATCCTGTCCAAATTGCTCGT+GGG | 0.638174 | 5.3:-40599262 | MS.gene045864:CDS |
| CCATCATTTACTATCCTGGG+TGG | 0.643127 | 5.3:+40599988 | None:intergenic |
| AGATGCCTTAAATGCAACCA+AGG | 0.644330 | 5.3:-40596884 | MS.gene045864:intron |
| GAAGGAATGCAATTCGATCG+CGG | 0.648682 | 5.3:-40598638 | MS.gene045864:CDS |
| ACAACAAGTATGGGCCACCC+AGG | 0.649218 | 5.3:-40600002 | MS.gene045864:CDS |
| TAGAATCATGGATCCAACAA+AGG | 0.660491 | 5.3:-40596092 | MS.gene045864:intron |
| GATATTGCCATCTTGACTGG+AGG | 0.662526 | 5.3:-40598259 | MS.gene045864:intron |
| AGTAGATCTTCACAACTGCA+AGG | 0.668006 | 5.3:-40598573 | MS.gene045864:intron |
| ATTACAACGTAGAAAGCCCA+TGG | 0.668199 | 5.3:-40595863 | MS.gene045864:CDS |
| ATGTTGCAGAAGTCAGCGCA+GGG | 0.672978 | 5.3:-40598772 | MS.gene045864:CDS |
| AAGGATAGCAAGATTATCAG+GGG | 0.686126 | 5.3:-40597089 | MS.gene045864:CDS |
| ATGGTTGTTCTAGTTCCATG+CGG | 0.719533 | 5.3:+40595884 | None:intergenic |
| AGGATAGCAAGATTATCAGG+GGG | 0.726273 | 5.3:-40597088 | MS.gene045864:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATAATTTATTTTTAAA+AGG | + | chr5.3:40600212-40600231 | None:intergenic | 0.0% |
| !! | AAATTATTTAAAAAACTTCA+AGG | - | chr5.3:40599946-40599965 | MS.gene045864:intron | 10.0% |
| !! | AATTATTTAAAAAACTTCAA+GGG | - | chr5.3:40599947-40599966 | MS.gene045864:intron | 10.0% |
| !! | ATGAATTCTATAAAATAATT+AGG | - | chr5.3:40597021-40597040 | MS.gene045864:intron | 10.0% |
| !! | ATTATTAAAAATAAACTTAG+GGG | - | chr5.3:40597194-40597213 | MS.gene045864:intron | 10.0% |
| !! | CAATTATTAAAAATAAACTT+AGG | - | chr5.3:40597192-40597211 | MS.gene045864:intron | 10.0% |
| !!! | AATCATTTTATTTTCATTTT+TGG | - | chr5.3:40598505-40598524 | MS.gene045864:intron | 10.0% |
| !!! | AATGTTTTATATATTACAAT+TGG | - | chr5.3:40599777-40599796 | MS.gene045864:intron | 10.0% |
| !!! | CTAAGTTTATTTTTAATAAT+TGG | + | chr5.3:40597194-40597213 | None:intergenic | 10.0% |
| !! | AAACAAAAATCATAGAAAAA+TGG | + | chr5.3:40596565-40596584 | None:intergenic | 15.0% |
| !! | AATTTATATTACCTTAAGAA+TGG | + | chr5.3:40598483-40598502 | None:intergenic | 15.0% |
| !! | ATACGATAATAATTCATTAA+AGG | - | chr5.3:40597622-40597641 | MS.gene045864:intron | 15.0% |
| !! | TTATTAATTTCAGATTGAAT+TGG | - | chr5.3:40595819-40595838 | MS.gene045864:CDS | 15.0% |
| !!! | TTTCATTACTATTCTAAAAA+TGG | + | chr5.3:40596608-40596627 | None:intergenic | 15.0% |
| !! | AAAAGAAGATATTGAATGAA+AGG | - | chr5.3:40598432-40598451 | MS.gene045864:CDS | 20.0% |
| !! | AATATTTAGTATACCTTTGT+TGG | + | chr5.3:40599464-40599483 | None:intergenic | 20.0% |
| !! | CAAAAGTCTAGTAATATAAA+AGG | + | chr5.3:40599845-40599864 | None:intergenic | 20.0% |
| !! | GTATTATGTATGTTGAAAAT+TGG | - | chr5.3:40599554-40599573 | MS.gene045864:intron | 20.0% |
| !! | TAAATATTCAAACCAACAAA+AGG | + | chr5.3:40599110-40599129 | None:intergenic | 20.0% |
| !! | TAATGTAAAGTCAAAATTAC+AGG | + | chr5.3:40597427-40597446 | None:intergenic | 20.0% |
| !! | TCAGTAACTATTTAGAAAAA+TGG | - | chr5.3:40598971-40598990 | MS.gene045864:intron | 20.0% |
| !! | TCATAAAAATTTACCACTTT+AGG | - | chr5.3:40600149-40600168 | MS.gene045864:intron | 20.0% |
| !! | TCCATTAAAACATTCAAATA+TGG | + | chr5.3:40596086-40596105 | None:intergenic | 20.0% |
| !! | TCTAATATTATACAATGATC+TGG | + | chr5.3:40598318-40598337 | None:intergenic | 20.0% |
| !! | TTAATTAAACCATAAGAATG+TGG | + | chr5.3:40595658-40595677 | None:intergenic | 20.0% |
| !! | TTCAAACTTTATCATATCTT+TGG | + | chr5.3:40597705-40597724 | None:intergenic | 20.0% |
| !!! | AAATCATAGAAAAATGGATT+TGG | + | chr5.3:40596559-40596578 | None:intergenic | 20.0% |
| !!! | ACCATATTTGAATGTTTTAA+TGG | - | chr5.3:40596082-40596101 | MS.gene045864:intron | 20.0% |
| !!! | ATTTTATAGAATTCATGTGA+GGG | + | chr5.3:40597017-40597036 | None:intergenic | 20.0% |
| !!! | TATTTTATAGAATTCATGTG+AGG | + | chr5.3:40597018-40597037 | None:intergenic | 20.0% |
| !!! | TTATTTTCATTTTTGGTATC+AGG | - | chr5.3:40598512-40598531 | MS.gene045864:intron | 20.0% |
| !!! | TTTGACTTTACATTACAATA+TGG | - | chr5.3:40597432-40597451 | MS.gene045864:intron | 20.0% |
| !!! | TTTGCAATTTTGGAATATTT+TGG | + | chr5.3:40596139-40596158 | None:intergenic | 20.0% |
| ! | AACCAAATTTATAGAGGATA+AGG | - | chr5.3:40597781-40597800 | MS.gene045864:intron | 25.0% |
| ! | AATGAATTATTATCGTATGC+TGG | + | chr5.3:40597620-40597639 | None:intergenic | 25.0% |
| ! | ACTGTAATAAGAGAAGATAT+GGG | - | chr5.3:40598135-40598154 | MS.gene045864:intron | 25.0% |
| ! | AGAACCTGAATCTAAATTAT+AGG | - | chr5.3:40598584-40598603 | MS.gene045864:CDS | 25.0% |
| ! | ATGATAAAGTTTGAATTGCA+TGG | - | chr5.3:40597710-40597729 | MS.gene045864:intron | 25.0% |
| ! | ATGGTTGAAATAAAGATCTT+TGG | + | chr5.3:40595316-40595335 | None:intergenic | 25.0% |
| ! | ATTAGAATGAATTTGATGCA+TGG | - | chr5.3:40598332-40598351 | MS.gene045864:CDS | 25.0% |
| ! | CAAAATTGCAAATGAAGTTT+GGG | - | chr5.3:40596147-40596166 | MS.gene045864:CDS | 25.0% |
| ! | GTATTCTACAAAATACGAAA+TGG | + | chr5.3:40598398-40598417 | None:intergenic | 25.0% |
| ! | TACTGTAATAAGAGAAGATA+TGG | - | chr5.3:40598134-40598153 | MS.gene045864:intron | 25.0% |
| ! | TAGTTAACAACATCTGAAAA+AGG | - | chr5.3:40598359-40598378 | MS.gene045864:CDS | 25.0% |
| ! | TGGAAAACAACATTATTGTA+CGG | + | chr5.3:40597685-40597704 | None:intergenic | 25.0% |
| ! | TTGTAATGTTATCTGTAGAT+TGG | - | chr5.3:40599150-40599169 | MS.gene045864:intron | 25.0% |
| !! | ATCTTTTGTAATGACAACTT+TGG | + | chr5.3:40598205-40598224 | None:intergenic | 25.0% |
| !! | ATGAAAAGAGCACAAATTTA+AGG | + | chr5.3:40596229-40596248 | None:intergenic | 25.0% |
| !! | ATTCTAATTTGTAACATTGC+AGG | - | chr5.3:40598736-40598755 | MS.gene045864:CDS | 25.0% |
| !! | CTCTTTAAGCATTTTAAACT+AGG | - | chr5.3:40600068-40600087 | MS.gene045864:CDS | 25.0% |
| !! | GTGGTAAATGGTAATTTTAT+GGG | + | chr5.3:40595639-40595658 | None:intergenic | 25.0% |
| !! | TGTGGTAAATGGTAATTTTA+TGG | + | chr5.3:40595640-40595659 | None:intergenic | 25.0% |
| !! | TTGGAACACTAAACTAATTT+TGG | + | chr5.3:40596027-40596046 | None:intergenic | 25.0% |
| !! | TTTTACTTATATCTTCTGTG+AGG | + | chr5.3:40599493-40599512 | None:intergenic | 25.0% |
| !!! | ATGCGATGTCTTTTTAAAAA+TGG | - | chr5.3:40600018-40600037 | MS.gene045864:CDS | 25.0% |
| !!! | ATTCATGGTTGTTTTGTTAT+TGG | + | chr5.3:40597905-40597924 | None:intergenic | 25.0% |
| !!! | GAAATACCGATTTTGAAATA+TGG | - | chr5.3:40596473-40596492 | MS.gene045864:intron | 25.0% |
| !!! | GATATTTTGATTGAAGTTGT+TGG | + | chr5.3:40596046-40596065 | None:intergenic | 25.0% |
| !!! | TGCGATGTCTTTTTAAAAAT+GGG | - | chr5.3:40600019-40600038 | MS.gene045864:CDS | 25.0% |
| !!! | TTTTTCGCTATCATTTTAGT+AGG | + | chr5.3:40599207-40599226 | None:intergenic | 25.0% |
| AAAGGATAGCAAGATTATCA+GGG | - | chr5.3:40598450-40598469 | MS.gene045864:CDS | 30.0% | |
| AACCATAAGAATGTGGTAAA+TGG | + | chr5.3:40595651-40595670 | None:intergenic | 30.0% | |
| AATAGTCTAGAGATTGTAGA+AGG | - | chr5.3:40596884-40596903 | MS.gene045864:intron | 30.0% | |
| ACAACGAACCAAATTTATAG+AGG | - | chr5.3:40597775-40597794 | MS.gene045864:intron | 30.0% | |
| ACCATATTGTTCAATTCACT+CGG | + | chr5.3:40598012-40598031 | None:intergenic | 30.0% | |
| ACTAATTCAGGTATTAGAGT+GGG | - | chr5.3:40599741-40599760 | MS.gene045864:intron | 30.0% | |
| AGCACTCCATATTTCAAAAT+CGG | + | chr5.3:40596482-40596501 | None:intergenic | 30.0% | |
| ATATTTACTCAGTGCATTCT+TGG | - | chr5.3:40598100-40598119 | MS.gene045864:intron | 30.0% | |
| CACAAAGATAGCATCAAAAT+TGG | - | chr5.3:40597510-40597529 | MS.gene045864:intron | 30.0% | |
| CCAAAATTGCAAATGAAGTT+TGG | - | chr5.3:40596146-40596165 | MS.gene045864:CDS | 30.0% | |
| CCTACCTATAATTTAGATTC+AGG | + | chr5.3:40598591-40598610 | None:intergenic | 30.0% | |
| CCTGAATCTAAATTATAGGT+AGG | - | chr5.3:40598588-40598607 | MS.gene045864:CDS | 30.0% | |
| CTAATACCTGAATTAGTCAT+GGG | + | chr5.3:40599738-40599757 | None:intergenic | 30.0% | |
| GAACAATATGGTAGAATACA+TGG | - | chr5.3:40598020-40598039 | MS.gene045864:intron | 30.0% | |
| GCAAAAACCAATATCTTAGT+TGG | - | chr5.3:40595889-40595908 | MS.gene045864:CDS | 30.0% | |
| GTTTAATAGGTCTAAGAACA+TGG | - | chr5.3:40595783-40595802 | MS.gene045864:intron | 30.0% | |
| TACCATTTACCACATTCTTA+TGG | - | chr5.3:40595646-40595665 | MS.gene045864:intron | 30.0% | |
| TAGAGAAGCAATTGAAAAGA+GGG | - | chr5.3:40598254-40598273 | MS.gene045864:intron | 30.0% | |
| TCAAATTAAGATCCTTGTTG+AGG | - | chr5.3:40598281-40598300 | MS.gene045864:CDS | 30.0% | |
| TCTAATACCTGAATTAGTCA+TGG | + | chr5.3:40599739-40599758 | None:intergenic | 30.0% | |
| TTGCATAAAGTAGGAAGAAA+AGG | - | chr5.3:40596827-40596846 | MS.gene045864:intron | 30.0% | |
| TTGCTGAATTCAGAAACATT+GGG | - | chr5.3:40596709-40596728 | MS.gene045864:CDS | 30.0% | |
| ! | AAAATGATAGCGAAAAATGC+CGG | - | chr5.3:40599210-40599229 | MS.gene045864:CDS | 30.0% |
| ! | AATATGTTCAGAAGCTCTTT+TGG | + | chr5.3:40597101-40597120 | None:intergenic | 30.0% |
| ! | AGCCTTATCCTCTATAAATT+TGG | + | chr5.3:40597786-40597805 | None:intergenic | 30.0% |
| ! | AGTGAGTGAATTTTTCTTTG+CGG | - | chr5.3:40595440-40595459 | MS.gene045864:intron | 30.0% |
| ! | CCAAACTTCATTTGCAATTT+TGG | + | chr5.3:40596149-40596168 | None:intergenic | 30.0% |
| ! | GATCTTTATTTCAACCATGA+TGG | - | chr5.3:40595318-40595337 | MS.gene045864:intron | 30.0% |
| ! | GCAGATGATAACATGAATTT+TGG | - | chr5.3:40599383-40599402 | MS.gene045864:intron | 30.0% |
| !! | ACAAATGCTATTGACTTTAG+GGG | - | chr5.3:40596200-40596219 | MS.gene045864:intron | 30.0% |
| !! | CACAAATGCTATTGACTTTA+GGG | - | chr5.3:40596199-40596218 | MS.gene045864:intron | 30.0% |
| !! | TTTACACACTTTGAGATGAA+TGG | - | chr5.3:40596582-40596601 | MS.gene045864:intron | 30.0% |
| !!! | ATTTTGAAATATGGAGTGCT+TGG | - | chr5.3:40596482-40596501 | MS.gene045864:intron | 30.0% |
| !!! | GGTTGTTTTGTTATTGGTTT+AGG | + | chr5.3:40597899-40597918 | None:intergenic | 30.0% |
| !!! | TTTGGTTTGTATCCTTTTGT+TGG | - | chr5.3:40599095-40599114 | MS.gene045864:intron | 30.0% |
| AACACAACATTTCTTCCCTT+AGG | + | chr5.3:40595516-40595535 | None:intergenic | 35.0% | |
| AACTACAAGCGAGAATTGAT+AGG | + | chr5.3:40596681-40596700 | None:intergenic | 35.0% | |
| AAGATCCATTGGAGAATGTT+GGG | - | chr5.3:40595842-40595861 | MS.gene045864:CDS | 35.0% | |
| AAGGATAGCAAGATTATCAG+GGG | - | chr5.3:40598451-40598470 | MS.gene045864:CDS | 35.0% | |
| AAGTACCTTGGTTGCATTTA+AGG | + | chr5.3:40598664-40598683 | None:intergenic | 35.0% | |
| ACAAACACAAGTAGAGTTGA+AGG | - | chr5.3:40598614-40598633 | MS.gene045864:CDS | 35.0% | |
| ACACATTGAAGCAGAGAAAA+AGG | + | chr5.3:40598687-40598706 | None:intergenic | 35.0% | |
| ACCGAGTGAATTGAACAATA+TGG | - | chr5.3:40598008-40598027 | MS.gene045864:intron | 35.0% | |
| ACTATTCCATCTACTTCTGT+TGG | - | chr5.3:40595993-40596012 | MS.gene045864:intron | 35.0% | |
| ATATTGTTCAATTCACTCGG+TGG | + | chr5.3:40598009-40598028 | None:intergenic | 35.0% | |
| ATTGAAGTGGCTTATAGTAG+AGG | + | chr5.3:40597854-40597873 | None:intergenic | 35.0% | |
| ATTGTTCCAACAGAAGTAGA+TGG | + | chr5.3:40596002-40596021 | None:intergenic | 35.0% | |
| CAATATGGTAGAATACATGG+TGG | - | chr5.3:40598023-40598042 | MS.gene045864:intron | 35.0% | |
| CCTAAAGTCAATAGCATTTG+TGG | + | chr5.3:40596201-40596220 | None:intergenic | 35.0% | |
| CTAAGATCAAAAGCTAGTGA+TGG | + | chr5.3:40598055-40598074 | None:intergenic | 35.0% | |
| CTAGAGAAGCAATTGAAAAG+AGG | - | chr5.3:40598253-40598272 | MS.gene045864:intron | 35.0% | |
| CTATTAAACCACCTAAGCAA+CGG | + | chr5.3:40595772-40595791 | None:intergenic | 35.0% | |
| CTTAATCAAAGAGGGAATGA+AGG | - | chr5.3:40595948-40595967 | MS.gene045864:CDS | 35.0% | |
| CTTGCTGAATTCAGAAACAT+TGG | - | chr5.3:40596708-40596727 | MS.gene045864:CDS | 35.0% | |
| GAAAGGATAGCAAGATTATC+AGG | - | chr5.3:40598449-40598468 | MS.gene045864:CDS | 35.0% | |
| GAATGAATGTAAGCTCATGT+CGG | - | chr5.3:40599001-40599020 | MS.gene045864:intron | 35.0% | |
| GACTAATTCAGGTATTAGAG+TGG | - | chr5.3:40599740-40599759 | MS.gene045864:intron | 35.0% | |
| GATTGAATTGGAAGATCCAT+TGG | - | chr5.3:40595831-40595850 | MS.gene045864:CDS | 35.0% | |
| GGAGTAGTGACAATTGAAAA+AGG | - | chr5.3:40596848-40596867 | MS.gene045864:intron | 35.0% | |
| GGATAGCATAAAAATTCTCC+TGG | - | chr5.3:40598823-40598842 | MS.gene045864:intron | 35.0% | |
| GTAGATGGAATAGTCATGTA+TGG | + | chr5.3:40595987-40596006 | None:intergenic | 35.0% | |
| TACTGTCATCTTTCTTCGAT+CGG | + | chr5.3:40596951-40596970 | None:intergenic | 35.0% | |
| TAGAATCATGGATCCAACAA+AGG | - | chr5.3:40599448-40599467 | MS.gene045864:intron | 35.0% | |
| TATCAATTCTCGCTTGTAGT+TGG | - | chr5.3:40596680-40596699 | MS.gene045864:intron | 35.0% | |
| TATGCAAAAACATCACTGCT+TGG | - | chr5.3:40597570-40597589 | MS.gene045864:intron | 35.0% | |
| TCTCCATCATTTACTATCCT+GGG | + | chr5.3:40595558-40595577 | None:intergenic | 35.0% | |
| TGAAAAATCACCTCCAATTG+TGG | + | chr5.3:40595732-40595751 | None:intergenic | 35.0% | |
| TGATACAAGAAGCTTCTTTG+TGG | + | chr5.3:40595349-40595368 | None:intergenic | 35.0% | |
| TGCTGAATTCAGAAACATTG+GGG | - | chr5.3:40596710-40596729 | MS.gene045864:CDS | 35.0% | |
| TGGCAATGTTGTCATAGATA+AGG | - | chr5.3:40599239-40599258 | MS.gene045864:CDS | 35.0% | |
| TGGGTGAATGACTAAAAAGA+AGG | + | chr5.3:40595620-40595639 | None:intergenic | 35.0% | |
| TGTATGTTGAAAATTGGTGC+AGG | - | chr5.3:40599560-40599579 | MS.gene045864:intron | 35.0% | |
| TTCTCCATCATTTACTATCC+TGG | + | chr5.3:40595559-40595578 | None:intergenic | 35.0% | |
| TTGATTGACTGTACCACAAT+TGG | - | chr5.3:40595716-40595735 | MS.gene045864:intron | 35.0% | |
| TTGTGTTGCACAACAAGTAT+GGG | - | chr5.3:40595529-40595548 | MS.gene045864:intron | 35.0% | |
| TTTGTGGCGTAAGCATATAA+TGG | + | chr5.3:40596185-40596204 | None:intergenic | 35.0% | |
| ! | TCTGTTGCAAGCATTCTTTT+TGG | - | chr5.3:40599077-40599096 | MS.gene045864:intron | 35.0% |
| ! | TGAATTTTTCTTTGCGGTGT+AGG | - | chr5.3:40595446-40595465 | MS.gene045864:intron | 35.0% |
| ! | TGCTCTTTTCATTCTCTTGT+AGG | - | chr5.3:40596237-40596256 | MS.gene045864:intron | 35.0% |
| ! | TTGTACGGACAAATTGACTT+TGG | + | chr5.3:40597670-40597689 | None:intergenic | 35.0% |
| ! | TTTTATGCTATCCACCTTCT+TGG | + | chr5.3:40598816-40598835 | None:intergenic | 35.0% |
| !! | AAAATGCTTAAAGAGTGTCC+CGG | + | chr5.3:40600063-40600082 | None:intergenic | 35.0% |
| !! | ACCAATATCTTAGTTGGTGA+TGG | - | chr5.3:40595895-40595914 | MS.gene045864:CDS | 35.0% |
| !! | CCAATTTTGATAGTTGCAGA+GGG | - | chr5.3:40597146-40597165 | MS.gene045864:intron | 35.0% |
| !! | CCACAAATGCTATTGACTTT+AGG | - | chr5.3:40596198-40596217 | MS.gene045864:intron | 35.0% |
| !! | TATTGGTTTAGGCATTACAC+TGG | + | chr5.3:40597888-40597907 | None:intergenic | 35.0% |
| !! | TCCAATTTTGATAGTTGCAG+AGG | - | chr5.3:40597145-40597164 | MS.gene045864:intron | 35.0% |
| AAACACTTGTACCGTTGCTT+AGG | - | chr5.3:40595758-40595777 | MS.gene045864:intron | 40.0% | |
| AACAGTTTCTCAAGAACCTC+AGG | + | chr5.3:40599266-40599285 | None:intergenic | 40.0% | |
| ACATCTGTTGTTCTTGCTCA+TGG | - | chr5.3:40595925-40595944 | MS.gene045864:CDS | 40.0% | |
| ACATTGGGGTTTGCATTTGT+AGG | - | chr5.3:40596724-40596743 | MS.gene045864:CDS | 40.0% | |
| AGAATGCCCATGACTAATTC+AGG | - | chr5.3:40599729-40599748 | MS.gene045864:intron | 40.0% | |
| AGATCCATTGGAGAATGTTG+GGG | - | chr5.3:40595843-40595862 | MS.gene045864:CDS | 40.0% | |
| AGATGCCTTAAATGCAACCA+AGG | - | chr5.3:40598656-40598675 | MS.gene045864:CDS | 40.0% | |
| AGGATAGCAAGATTATCAGG+GGG | - | chr5.3:40598452-40598471 | MS.gene045864:CDS | 40.0% | |
| AGTAGATCTTCACAACTGCA+AGG | - | chr5.3:40596967-40596986 | MS.gene045864:intron | 40.0% | |
| ATGGGCTTTCTACGTTGTAA+TGG | + | chr5.3:40599678-40599697 | None:intergenic | 40.0% | |
| ATTACAACGTAGAAAGCCCA+TGG | - | chr5.3:40599677-40599696 | MS.gene045864:CDS | 40.0% | |
| ATTGACTGTACCACAATTGG+AGG | - | chr5.3:40595719-40595738 | MS.gene045864:intron | 40.0% | |
| CCCTCTGCAACTATCAAAAT+TGG | + | chr5.3:40597149-40597168 | None:intergenic | 40.0% | |
| CGTTGCTTAGGTGGTTTAAT+AGG | - | chr5.3:40595770-40595789 | MS.gene045864:intron | 40.0% | |
| CTGTTATGAGGATCTCATGA+AGG | - | chr5.3:40599424-40599443 | MS.gene045864:intron | 40.0% | |
| CTTCAGATTGAAGACGTGTT+TGG | + | chr5.3:40599052-40599071 | None:intergenic | 40.0% | |
| GAAAATTGGTGCAGGTTGTT+AGG | - | chr5.3:40599568-40599587 | MS.gene045864:intron | 40.0% | |
| GAAGATATTGCCATCTTGAC+TGG | - | chr5.3:40597278-40597297 | MS.gene045864:CDS | 40.0% | |
| GAAGATCCATTGGAGAATGT+TGG | - | chr5.3:40595841-40595860 | MS.gene045864:CDS | 40.0% | |
| GAATTAGTCATGGGCATTCT+AGG | + | chr5.3:40599729-40599748 | None:intergenic | 40.0% | |
| GACGTTTGATTCAGATCAGA+CGG | - | chr5.3:40596412-40596431 | MS.gene045864:intron | 40.0% | |
| GCCATCACCAACTAAGATAT+TGG | + | chr5.3:40595899-40595918 | None:intergenic | 40.0% | |
| GCTCATGGCTTAATCAAAGA+GGG | - | chr5.3:40595940-40595959 | MS.gene045864:CDS | 40.0% | |
| GCTTAAGGTTGCTGCTATTA+AGG | - | chr5.3:40597220-40597239 | MS.gene045864:intron | 40.0% | |
| GGAGAATGTTGGGGTTAAAT+TGG | - | chr5.3:40595852-40595871 | MS.gene045864:CDS | 40.0% | |
| GTGCATTCTTGGAACTTATC+AGG | - | chr5.3:40598111-40598130 | MS.gene045864:intron | 40.0% | |
| GTTAAATTGGTGAGACAAGC+TGG | - | chr5.3:40595865-40595884 | MS.gene045864:CDS | 40.0% | |
| GTTGTGTTGCACAACAAGTA+TGG | - | chr5.3:40595528-40595547 | MS.gene045864:intron | 40.0% | |
| TCACACTGTTATTACATCGC+TGG | - | chr5.3:40596390-40596409 | MS.gene045864:intron | 40.0% | |
| TCTCATGAAGGCTAGAATCA+TGG | - | chr5.3:40599436-40599455 | MS.gene045864:intron | 40.0% | |
| TCTTATACCTCCAGTCAAGA+TGG | + | chr5.3:40597291-40597310 | None:intergenic | 40.0% | |
| TCTTTGTGGTTGAACCATCA+TGG | + | chr5.3:40595335-40595354 | None:intergenic | 40.0% | |
| TGCTCATGGCTTAATCAAAG+AGG | - | chr5.3:40595939-40595958 | MS.gene045864:CDS | 40.0% | |
| TGGAGAAACTGTTCTCAAAG+AGG | - | chr5.3:40595572-40595591 | MS.gene045864:intron | 40.0% | |
| TGTCGGAAACATGATTTCTG+AGG | - | chr5.3:40596802-40596821 | MS.gene045864:intron | 40.0% | |
| TTAACCCCAACATTCTCCAA+TGG | + | chr5.3:40595850-40595869 | None:intergenic | 40.0% | |
| TTGTCATAGATAAGGTCCTG+AGG | - | chr5.3:40599247-40599266 | MS.gene045864:CDS | 40.0% | |
| TTTATGAGTGAGTGCGTATG+TGG | + | chr5.3:40598945-40598964 | None:intergenic | 40.0% | |
| ! | ATTGAGGAAGGTGTAGTAGT+TGG | - | chr5.3:40598764-40598783 | MS.gene045864:CDS | 40.0% |
| ! | CACTCTTTAAGAGCCTAAAG+TGG | + | chr5.3:40600165-40600184 | None:intergenic | 40.0% |
| ! | CCTTCTTGGATAGTCTTAGA+AGG | + | chr5.3:40598802-40598821 | None:intergenic | 40.0% |
| ! | GACAACATTGCCATTTACAC+CGG | + | chr5.3:40599232-40599251 | None:intergenic | 40.0% |
| ! | GTTTTCTCTGTACCTCAACA+AGG | + | chr5.3:40598296-40598315 | None:intergenic | 40.0% |
| ! | TAAACTTAGGGGTGTGCTTA+AGG | - | chr5.3:40597205-40597224 | MS.gene045864:intron | 40.0% |
| ! | TCTAAGACTATCCAAGAAGG+TGG | - | chr5.3:40598802-40598821 | MS.gene045864:intron | 40.0% |
| ! | TCTGAGGCTTTGCATAAAGT+AGG | - | chr5.3:40596818-40596837 | MS.gene045864:intron | 40.0% |
| ! | TGGATTTTCACAGGTCGAAA+GGG | + | chr5.3:40597932-40597951 | None:intergenic | 40.0% |
| ! | TTGGATTTTCACAGGTCGAA+AGG | + | chr5.3:40597933-40597952 | None:intergenic | 40.0% |
| !! | AAATGCTTAAAGAGTGTCCC+GGG | + | chr5.3:40600062-40600081 | None:intergenic | 40.0% |
| !! | AGTGCTTGGTTTTTATCCGA+CGG | - | chr5.3:40596496-40596515 | MS.gene045864:intron | 40.0% |
| !! | ATGGTTGTTCTAGTTCCATG+CGG | + | chr5.3:40599659-40599678 | None:intergenic | 40.0% |
| !! | CAGAGAAAAAGGAAGTACCT+TGG | + | chr5.3:40598676-40598695 | None:intergenic | 40.0% |
| !! | CCTTCTAAGACTATCCAAGA+AGG | - | chr5.3:40598799-40598818 | MS.gene045864:intron | 40.0% |
| !! | CTATTAAGGCTCCTGCTTTT+GGG | - | chr5.3:40597234-40597253 | MS.gene045864:intron | 40.0% |
| !! | GCAGTGATGTTTTTGCATAG+TGG | + | chr5.3:40597569-40597588 | None:intergenic | 40.0% |
| !! | TATTAAGGCTCCTGCTTTTG+GGG | - | chr5.3:40597235-40597254 | MS.gene045864:intron | 40.0% |
| AACATTGCAGGCAGCAATTG+AGG | - | chr5.3:40598748-40598767 | MS.gene045864:CDS | 45.0% | |
| AATCCTGTCCAAATTGCTCG+TGG | - | chr5.3:40596277-40596296 | MS.gene045864:intron | 45.0% | |
| ACTCCCATCAGTGACTAGTA+GGG | + | chr5.3:40598232-40598251 | None:intergenic | 45.0% | |
| ATCCTGTCCAAATTGCTCGT+GGG | - | chr5.3:40596278-40596297 | MS.gene045864:intron | 45.0% | |
| CACCTTAGAAAAAGCCAGCA+CGG | - | chr5.3:40598161-40598180 | MS.gene045864:intron | 45.0% | |
| CCACCCAGGATAGTAAATGA+TGG | - | chr5.3:40595552-40595571 | MS.gene045864:intron | 45.0% | |
| CCATCATTTACTATCCTGGG+TGG | + | chr5.3:40595555-40595574 | None:intergenic | 45.0% | |
| CCTGGACAATGAAGAGCAAA+AGG | - | chr5.3:40598841-40598860 | MS.gene045864:intron | 45.0% | |
| CTACCCTACTAGTCACTGAT+GGG | - | chr5.3:40598226-40598245 | MS.gene045864:intron | 45.0% | |
| CTCTTGTAGGTTATTGCAGC+TGG | - | chr5.3:40596250-40596269 | MS.gene045864:intron | 45.0% | |
| GAAGGAATGCAATTCGATCG+CGG | - | chr5.3:40596902-40596921 | MS.gene045864:CDS | 45.0% | |
| GATATTGCCATCTTGACTGG+AGG | - | chr5.3:40597281-40597300 | MS.gene045864:CDS | 45.0% | |
| GCAGGGAACGATTATGTTGT+CGG | - | chr5.3:40596785-40596804 | MS.gene045864:CDS | 45.0% | |
| GCGAAAAATGCCGGTGTAAA+TGG | - | chr5.3:40599219-40599238 | MS.gene045864:CDS | 45.0% | |
| GGGTTTGCATTTGTAGGTTG+AGG | - | chr5.3:40596730-40596749 | MS.gene045864:CDS | 45.0% | |
| GGTCGAAAGGGTTTGATTCA+TGG | + | chr5.3:40597920-40597939 | None:intergenic | 45.0% | |
| TACTCCCATCAGTGACTAGT+AGG | + | chr5.3:40598233-40598252 | None:intergenic | 45.0% | |
| TAGCATATCTTCTGTCGTGC+AGG | - | chr5.3:40599355-40599374 | MS.gene045864:intron | 45.0% | |
| TATAGAGCATGCAGCTTCTG+TGG | - | chr5.3:40599596-40599615 | MS.gene045864:CDS | 45.0% | |
| TCTACCCTACTAGTCACTGA+TGG | - | chr5.3:40598225-40598244 | MS.gene045864:intron | 45.0% | |
| TCTCAATCCCACGAGCAATT+TGG | + | chr5.3:40596288-40596307 | None:intergenic | 45.0% | |
| TGCTGCTAGAGACTGTTATG+AGG | - | chr5.3:40599412-40599431 | MS.gene045864:intron | 45.0% | |
| ! | CCTTTTGCTCTTCATTGTCC+AGG | + | chr5.3:40598844-40598863 | None:intergenic | 45.0% |
| ! | GCTATTAAGGCTCCTGCTTT+TGG | - | chr5.3:40597233-40597252 | MS.gene045864:intron | 45.0% |
| ! | GGTGTTACATTGGGTCCTAA+GGG | - | chr5.3:40595498-40595517 | MS.gene045864:intron | 45.0% |
| ! | GGTTCTCTCATCGATTGAAG+TGG | + | chr5.3:40597867-40597886 | None:intergenic | 45.0% |
| ! | TACTAGACTTTTGACCCGTG+CGG | - | chr5.3:40599852-40599871 | MS.gene045864:intron | 45.0% |
| ! | TTTTCTTTGCGGTGTAGGCA+GGG | - | chr5.3:40595451-40595470 | MS.gene045864:intron | 45.0% |
| ! | TTTTTCTTTGCGGTGTAGGC+AGG | - | chr5.3:40595450-40595469 | MS.gene045864:intron | 45.0% |
| !! | AATGCTTAAAGAGTGTCCCG+GGG | + | chr5.3:40600061-40600080 | None:intergenic | 45.0% |
| !! | AGAGCTGCTTGGTGTTACAT+TGG | - | chr5.3:40595488-40595507 | MS.gene045864:intron | 45.0% |
| !! | GAGCTGCTTGGTGTTACATT+GGG | - | chr5.3:40595489-40595508 | MS.gene045864:intron | 45.0% |
| !! | TAGGCTCTTAAAGAGTGTCC+CGG | - | chr5.3:40600168-40600187 | MS.gene045864:intron | 45.0% |
| !! | TGGTGTTACATTGGGTCCTA+AGG | - | chr5.3:40595497-40595516 | MS.gene045864:intron | 45.0% |
| !!! | ATCCGTGCTGGCTTTTTCTA+AGG | + | chr5.3:40598166-40598185 | None:intergenic | 45.0% |
| !! | AATTATTAAAAATAAACTTA+GGG | - | chr5.3:40597193-40597212 | MS.gene045864:intron | 5.0% |
| AAAATCCAACCACCTCCAGC+TGG | - | chr5.3:40597944-40597963 | MS.gene045864:intron | 50.0% | |
| AAATGTTAACGAGTGCCCCC+GGG | + | chr5.3:40600189-40600208 | None:intergenic | 50.0% | |
| ACTGGTAGGATGAAGCCAGA+GGG | + | chr5.3:40597979-40597998 | None:intergenic | 50.0% | |
| AGTTGCAGAGGGAATTGAGC+AGG | - | chr5.3:40597157-40597176 | MS.gene045864:intron | 50.0% | |
| ATCCCACGAGCAATTTGGAC+AGG | + | chr5.3:40596283-40596302 | None:intergenic | 50.0% | |
| ATGTTGCAGAAGTCAGCGCA+GGG | - | chr5.3:40596768-40596787 | MS.gene045864:CDS | 50.0% | |
| CACTTGTACCGTTGCTTAGG+TGG | - | chr5.3:40595761-40595780 | MS.gene045864:intron | 50.0% | |
| CTTCGATCGGTGACGAAGTA+GGG | + | chr5.3:40596938-40596957 | None:intergenic | 50.0% | |
| GAAATGTTAACGAGTGCCCC+CGG | + | chr5.3:40600190-40600209 | None:intergenic | 50.0% | |
| GAGTACACATCATGGACCGT+CGG | + | chr5.3:40596515-40596534 | None:intergenic | 50.0% | |
| GGCATTCTAGGCATAGCCAT+GGG | + | chr5.3:40599717-40599736 | None:intergenic | 50.0% | |
| GGCTTTCTAGGCATAGCCAT+GGG | + | chr5.3:40599696-40599715 | None:intergenic | 50.0% | |
| GGTCCATGATGTGTACTCGT+GGG | - | chr5.3:40596517-40596536 | MS.gene045864:intron | 50.0% | |
| GTCCATGATGTGTACTCGTG+GGG | - | chr5.3:40596518-40596537 | MS.gene045864:intron | 50.0% | |
| TATGTTGCAGAAGTCAGCGC+AGG | - | chr5.3:40596767-40596786 | MS.gene045864:CDS | 50.0% | |
| TCTTCGATCGGTGACGAAGT+AGG | + | chr5.3:40596939-40596958 | None:intergenic | 50.0% | |
| TCTTGTTAACGAGTGTCCCC+GGG | - | chr5.3:40600042-40600061 | MS.gene045864:CDS | 50.0% | |
| TGCTGTTGTGATTGACCGCA+TGG | - | chr5.3:40599641-40599660 | MS.gene045864:CDS | 50.0% | |
| TGGCTTCATCCTACCAGTGT+CGG | - | chr5.3:40597981-40598000 | MS.gene045864:intron | 50.0% | |
| TGTACTCGTGGGGTGAATGT+GGG | - | chr5.3:40596528-40596547 | MS.gene045864:intron | 50.0% | |
| TTGCAGGCAGCAATTGAGGA+AGG | - | chr5.3:40598752-40598771 | MS.gene045864:CDS | 50.0% | |
| TTTCTTTGCGGTGTAGGCAG+GGG | - | chr5.3:40595452-40595471 | MS.gene045864:intron | 50.0% | |
| ! | GAGGAAGGTGTAGTAGTTGG+TGG | - | chr5.3:40598767-40598786 | MS.gene045864:CDS | 50.0% |
| ! | GGAGGTGGTTGGATTTTCAC+AGG | + | chr5.3:40597941-40597960 | None:intergenic | 50.0% |
| ! | GTCTTGTTAACGAGTGTCCC+CGG | - | chr5.3:40600041-40600060 | MS.gene045864:CDS | 50.0% |
| !! | AGGCTCTTAAAGAGTGTCCC+GGG | - | chr5.3:40600169-40600188 | MS.gene045864:intron | 50.0% |
| !! | AGGGGGCATTGCCATTCTTA+AGG | - | chr5.3:40598469-40598488 | MS.gene045864:CDS | 50.0% |
| !! | GAAGGTGTAGTAGTTGGTGG+TGG | - | chr5.3:40598770-40598789 | MS.gene045864:CDS | 50.0% |
| AAAGCCAGCACGGATGTGCT+TGG | - | chr5.3:40598171-40598190 | MS.gene045864:intron | 55.0% | |
| ACAACAAGTATGGGCCACCC+AGG | - | chr5.3:40595538-40595557 | MS.gene045864:intron | 55.0% | |
| AGAACCAAGCACATCCGTGC+TGG | + | chr5.3:40598178-40598197 | None:intergenic | 55.0% | |
| CACCCCACGAGTACACATCA+TGG | + | chr5.3:40596523-40596542 | None:intergenic | 55.0% | |
| CACTGGTAGGATGAAGCCAG+AGG | + | chr5.3:40597980-40597999 | None:intergenic | 55.0% | |
| CGGTCCATGATGTGTACTCG+TGG | - | chr5.3:40596516-40596535 | MS.gene045864:intron | 55.0% | |
| CTCTTGCGTTCCCCAAAAGC+AGG | + | chr5.3:40597248-40597267 | None:intergenic | 55.0% | |
| GACTTAGTGGCAGAGCTGCT+TGG | - | chr5.3:40595477-40595496 | MS.gene045864:intron | 55.0% | |
| GCATGGACGAGACAAGTGTG+AGG | - | chr5.3:40597727-40597746 | MS.gene045864:intron | 55.0% | |
| GCTTCATCCTACCAGTGTCG+GGG | - | chr5.3:40597983-40598002 | MS.gene045864:intron | 55.0% | |
| GGCATAGCCATGGGCTTTCT+AGG | + | chr5.3:40599687-40599706 | None:intergenic | 55.0% | |
| GGCTATGCCTAGAAAGCCCA+TGG | - | chr5.3:40599698-40599717 | MS.gene045864:CDS | 55.0% | |
| GGCTTCATCCTACCAGTGTC+GGG | - | chr5.3:40597982-40598001 | MS.gene045864:intron | 55.0% | |
| GGGCATTCTAGGCATAGCCA+TGG | + | chr5.3:40599718-40599737 | None:intergenic | 55.0% | |
| GGGCTTTCTAGGCATAGCCA+TGG | + | chr5.3:40599697-40599716 | None:intergenic | 55.0% | |
| GTGTACTCGTGGGGTGAATG+TGG | - | chr5.3:40596527-40596546 | MS.gene045864:intron | 55.0% | |
| TAATTGACCCGTGCACCGCA+CGG | + | chr5.3:40599870-40599889 | None:intergenic | 55.0% | |
| !! | GCTCTTAAAGAGTGTCCCGG+GGG | - | chr5.3:40600171-40600190 | MS.gene045864:intron | 55.0% |
| !! | GGCTCTTAAAGAGTGTCCCG+GGG | - | chr5.3:40600170-40600189 | MS.gene045864:intron | 55.0% |
| AACCACCTCCAGCTGGACCA+GGG | - | chr5.3:40597951-40597970 | MS.gene045864:intron | 60.0% | |
| AATTGACCCGTGCACCGCAC+GGG | + | chr5.3:40599869-40599888 | None:intergenic | 60.0% | |
| ! | CTTTTGACCCGTGCGGTGCA+CGG | - | chr5.3:40599859-40599878 | MS.gene045864:intron | 60.0% |
| ! | GTAGGCAGGGGTGGACTTAG+TGG | - | chr5.3:40595464-40595483 | MS.gene045864:intron | 60.0% |
| ! | TTTTGACCCGTGCGGTGCAC+GGG | - | chr5.3:40599860-40599879 | MS.gene045864:intron | 60.0% |
| ACCACCTCCAGCTGGACCAG+GGG | - | chr5.3:40597952-40597971 | MS.gene045864:intron | 65.0% | |
| CAACCACCTCCAGCTGGACC+AGG | - | chr5.3:40597950-40597969 | MS.gene045864:intron | 65.0% | |
| CTGGTCCAGCTGGAGGTGGT+TGG | + | chr5.3:40597952-40597971 | None:intergenic | 65.0% | |
| CTTTGCGGTGTAGGCAGGGG+TGG | - | chr5.3:40595455-40595474 | MS.gene045864:intron | 65.0% | |
| GATGAAGCCAGAGGGTCCCC+TGG | + | chr5.3:40597971-40597990 | None:intergenic | 65.0% | |
| AGAGGGTCCCCTGGTCCAGC+TGG | + | chr5.3:40597962-40597981 | None:intergenic | 70.0% | |
| AGCTGGACCAGGGGACCCTC+TGG | - | chr5.3:40597961-40597980 | MS.gene045864:intron | 70.0% | |
| TCCCCTGGTCCAGCTGGAGG+TGG | + | chr5.3:40597956-40597975 | None:intergenic | 70.0% | |
| TCGGTGGCCCCGACACTGGT+AGG | + | chr5.3:40597993-40598012 | None:intergenic | 70.0% | |
| ! | TCACTCGGTGGCCCCGACAC+TGG | + | chr5.3:40597997-40598016 | None:intergenic | 70.0% |
| GGGTCCCCTGGTCCAGCTGG+AGG | + | chr5.3:40597959-40597978 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 40595309 | 40600253 | 40595309 | ID=MS.gene045864 |
| chr5.3 | mRNA | 40595309 | 40600253 | 40595309 | ID=MS.gene045864.t1;Parent=MS.gene045864 |
| chr5.3 | exon | 40600200 | 40600253 | 40600200 | ID=MS.gene045864.t1.exon1;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40600200 | 40600253 | 40600200 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40599969 | 40600094 | 40599969 | ID=MS.gene045864.t1.exon2;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40599969 | 40600094 | 40599969 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40599593 | 40599730 | 40599593 | ID=MS.gene045864.t1.exon3;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40599593 | 40599730 | 40599593 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40599208 | 40599303 | 40599208 | ID=MS.gene045864.t1.exon4;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40599208 | 40599303 | 40599208 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40598574 | 40598816 | 40598574 | ID=MS.gene045864.t1.exon5;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40598574 | 40598816 | 40598574 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40598260 | 40598494 | 40598260 | ID=MS.gene045864.t1.exon6;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40598260 | 40598494 | 40598260 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40597260 | 40597429 | 40597260 | ID=MS.gene045864.t1.exon7;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40597260 | 40597429 | 40597260 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40597072 | 40597149 | 40597072 | ID=MS.gene045864.t1.exon8;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40597072 | 40597149 | 40597072 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40596885 | 40596956 | 40596885 | ID=MS.gene045864.t1.exon9;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40596885 | 40596956 | 40596885 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40596700 | 40596804 | 40596700 | ID=MS.gene045864.t1.exon10;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40596700 | 40596804 | 40596700 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40596302 | 40596394 | 40596302 | ID=MS.gene045864.t1.exon11;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40596302 | 40596394 | 40596302 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40596093 | 40596185 | 40596093 | ID=MS.gene045864.t1.exon12;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40596093 | 40596185 | 40596093 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40595812 | 40595980 | 40595812 | ID=MS.gene045864.t1.exon13;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40595812 | 40595980 | 40595812 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| chr5.3 | exon | 40595309 | 40595319 | 40595309 | ID=MS.gene045864.t1.exon14;Parent=MS.gene045864.t1 |
| chr5.3 | CDS | 40595309 | 40595319 | 40595309 | ID=cds.MS.gene045864.t1;Parent=MS.gene045864.t1 |
| Gene Sequence |
| Protein sequence |
