Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00537.t1 | XP_013465956.1 | 99.2 | 592 | 4 | 1 | 1 | 592 | 1 | 591 | 0.00E+00 | 1078.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00537.t1 | P08927 | 93.0 | 589 | 40 | 1 | 3 | 591 | 6 | 593 | 1.7e-294 | 1012.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00537.t1 | A0A072VDW9 | 99.2 | 592 | 4 | 1 | 1 | 592 | 1 | 591 | 0.0e+00 | 1078.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00537.t1 | MTR_1g017390 | 99.155 | 592 | 4 | 1 | 1 | 592 | 1 | 591 | 0.0 | 1163 |
MS.gene00537.t1 | MTR_1g017380 | 98.649 | 592 | 7 | 1 | 1 | 592 | 1 | 591 | 0.0 | 1157 |
MS.gene00537.t1 | MTR_4g057970 | 51.024 | 586 | 281 | 5 | 1 | 584 | 1 | 582 | 0.0 | 545 |
MS.gene00537.t1 | MTR_4g084130 | 47.681 | 539 | 276 | 5 | 41 | 577 | 34 | 568 | 5.36e-170 | 495 |
MS.gene00537.t1 | MTR_1g090140 | 45.548 | 584 | 298 | 6 | 8 | 586 | 5 | 573 | 4.16e-168 | 490 |
MS.gene00537.t1 | MTR_1g090130 | 46.679 | 527 | 276 | 3 | 48 | 573 | 34 | 556 | 9.46e-163 | 477 |
MS.gene00537.t1 | MTR_8g017080 | 43.376 | 551 | 302 | 5 | 42 | 586 | 29 | 575 | 5.09e-150 | 444 |
MS.gene00537.t1 | MTR_4g084130 | 47.912 | 455 | 234 | 3 | 125 | 577 | 3 | 456 | 7.20e-144 | 425 |
MS.gene00537.t1 | MTR_0991s0010 | 97.312 | 186 | 4 | 1 | 1 | 186 | 1 | 185 | 1.64e-118 | 349 |
MS.gene00537.t1 | MTR_5g087560 | 23.427 | 572 | 328 | 22 | 65 | 591 | 30 | 536 | 2.24e-11 | 67.0 |
MS.gene00537.t1 | MTR_7g067470 | 36.434 | 129 | 74 | 3 | 66 | 192 | 26 | 148 | 6.74e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00537.t1 | AT1G55490 | 89.576 | 566 | 56 | 2 | 26 | 591 | 37 | 599 | 0.0 | 1009 |
MS.gene00537.t1 | AT1G55490 | 89.576 | 566 | 56 | 2 | 26 | 591 | 37 | 599 | 0.0 | 1009 |
MS.gene00537.t1 | AT1G55490 | 89.576 | 566 | 56 | 2 | 26 | 591 | 37 | 599 | 0.0 | 1009 |
MS.gene00537.t1 | AT1G55490 | 89.576 | 566 | 56 | 2 | 26 | 591 | 37 | 599 | 0.0 | 1009 |
MS.gene00537.t1 | AT1G55490 | 89.576 | 566 | 56 | 2 | 26 | 591 | 37 | 599 | 0.0 | 1009 |
MS.gene00537.t1 | AT3G13470 | 90.270 | 555 | 53 | 1 | 37 | 591 | 42 | 595 | 0.0 | 1002 |
MS.gene00537.t1 | AT5G56500 | 88.475 | 564 | 62 | 3 | 30 | 592 | 36 | 597 | 0.0 | 993 |
MS.gene00537.t1 | AT5G56500 | 88.475 | 564 | 62 | 3 | 30 | 592 | 36 | 597 | 0.0 | 993 |
MS.gene00537.t1 | AT1G26230 | 66.841 | 573 | 189 | 1 | 13 | 584 | 4 | 576 | 0.0 | 788 |
MS.gene00537.t1 | AT1G26230 | 68.786 | 519 | 162 | 0 | 66 | 584 | 6 | 524 | 0.0 | 749 |
MS.gene00537.t1 | AT1G26230 | 69.126 | 515 | 159 | 0 | 70 | 584 | 2 | 516 | 0.0 | 746 |
MS.gene00537.t1 | AT1G26230 | 65.422 | 509 | 175 | 1 | 13 | 520 | 4 | 512 | 0.0 | 679 |
MS.gene00537.t1 | AT1G26230 | 64.920 | 439 | 153 | 1 | 13 | 450 | 4 | 442 | 0.0 | 582 |
MS.gene00537.t1 | AT2G28000 | 51.397 | 537 | 256 | 4 | 37 | 572 | 37 | 569 | 0.0 | 529 |
MS.gene00537.t1 | AT3G23990 | 45.629 | 572 | 294 | 5 | 8 | 578 | 5 | 560 | 2.91e-167 | 488 |
MS.gene00537.t1 | AT2G33210 | 46.073 | 573 | 289 | 7 | 10 | 579 | 7 | 562 | 4.31e-167 | 488 |
MS.gene00537.t1 | AT2G33210 | 45.899 | 573 | 285 | 8 | 10 | 579 | 7 | 557 | 2.70e-163 | 478 |
MS.gene00537.t1 | AT3G13860 | 46.168 | 548 | 284 | 6 | 48 | 592 | 33 | 572 | 1.28e-156 | 461 |
MS.gene00537.t1 | AT5G18820 | 47.681 | 539 | 275 | 6 | 44 | 579 | 31 | 565 | 9.68e-156 | 459 |
MS.gene00537.t1 | AT5G18820 | 46.943 | 458 | 239 | 4 | 125 | 579 | 3 | 459 | 1.19e-127 | 383 |
MS.gene00537.t1 | AT5G18820 | 45.714 | 385 | 205 | 3 | 44 | 427 | 31 | 412 | 6.84e-103 | 318 |
MS.gene00537.t1 | AT3G11830 | 23.285 | 554 | 309 | 21 | 65 | 566 | 30 | 519 | 9.06e-12 | 68.2 |
MS.gene00537.t1 | AT3G11830 | 23.201 | 556 | 309 | 21 | 65 | 566 | 30 | 521 | 2.19e-11 | 67.0 |
Find 151 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTCTGCAATTATCAAAAT+AGG | 0.166829 | 1.2:+5455729 | None:intergenic |
TGGCCATGGCGGAGACTTTA+AGG | 0.205297 | 1.2:+5458404 | None:intergenic |
AACTACTACCTCTGTTGTTT+TGG | 0.233024 | 1.2:-5457593 | MS.gene00537:CDS |
TGAGAATATTGGTGCTAAAT+TGG | 0.233906 | 1.2:-5457659 | MS.gene00537:CDS |
CTCGCTTTGTAACTGCTTCT+TGG | 0.266078 | 1.2:+5455324 | None:intergenic |
GCACTTAAGGCTCCTGGATT+TGG | 0.266390 | 1.2:-5455642 | MS.gene00537:CDS |
AACTATTGTGGTTGTATCTT+TGG | 0.272759 | 1.2:+5455361 | None:intergenic |
AATCTATAAATCACCTTTGT+AGG | 0.273262 | 1.2:+5454120 | None:intergenic |
AAGAGAGGGAAACCTCTATT+TGG | 0.307722 | 1.2:+5455285 | None:intergenic |
TTTAAGGTTCCGACTCTTCC+TGG | 0.311790 | 1.2:+5458420 | None:intergenic |
TGGTGGTGTGGCTGTAATTC+AGG | 0.336881 | 1.2:-5454937 | MS.gene00537:intron |
ACACCATCATTAACAATCTT+AGG | 0.351092 | 1.2:+5458158 | None:intergenic |
TCGCTTTGTAACTGCTTCTT+GGG | 0.358585 | 1.2:+5455325 | None:intergenic |
GGCCGCCAAGACAAATGATT+TGG | 0.362795 | 1.2:-5457626 | MS.gene00537:CDS |
TGTGAACAAGCTTGCAGATT+TGG | 0.366191 | 1.2:-5458240 | MS.gene00537:CDS |
CAATAAGAAACACACCTCTT+TGG | 0.381950 | 1.2:+5458127 | None:intergenic |
CCTCTGCAATTATCAAAATA+GGG | 0.385162 | 1.2:+5455730 | None:intergenic |
CTGTGTTGTTGTTGAGATAA+AGG | 0.387501 | 1.2:-5453453 | MS.gene00537:CDS |
GTTGTTCTTGAGAGCAAGTA+TGG | 0.388399 | 1.2:-5458185 | MS.gene00537:CDS |
TGGTGTTACTCTTGGTCCTA+AGG | 0.393067 | 1.2:-5458216 | MS.gene00537:CDS |
GAGGGTATTGTAGTTGGTGG+TGG | 0.394415 | 1.2:-5454641 | MS.gene00537:CDS |
ACTGAAGATTGCAGCACTTA+AGG | 0.394593 | 1.2:-5455655 | MS.gene00537:CDS |
CTTGTTGTGAACAAACTTAG+AGG | 0.403832 | 1.2:-5455681 | MS.gene00537:CDS |
GGCAACCCTATGGACAATTC+AGG | 0.408645 | 1.2:-5453410 | MS.gene00537:intron |
TCCAACGACGATACGAGATA+TGG | 0.410275 | 1.2:-5454198 | MS.gene00537:CDS |
ACAAATTAAGAACCAAATAG+AGG | 0.412098 | 1.2:-5455297 | MS.gene00537:intron |
GGATATTGAACAAGAAGCTT+TGG | 0.413311 | 1.2:-5455709 | MS.gene00537:CDS |
AAAGCTGGGAATGAGGTTCT+AGG | 0.414128 | 1.2:-5455407 | MS.gene00537:CDS |
GAGGATCCGGTTGAGAATAT+TGG | 0.429757 | 1.2:-5457670 | MS.gene00537:CDS |
GATGATATTGCCATCTTGAC+AGG | 0.432753 | 1.2:-5455597 | MS.gene00537:CDS |
GGCCTTAGCTTAGACAAAGC+TGG | 0.436997 | 1.2:-5455422 | MS.gene00537:CDS |
GTTGAGTAAGGTTGGTAGAA+AGG | 0.446649 | 1.2:-5456059 | MS.gene00537:CDS |
TTGCGTTCAAAAGGTGGAGT+TGG | 0.448665 | 1.2:-5457692 | MS.gene00537:intron |
GATTTGGTTGGTGTTACTCT+TGG | 0.449977 | 1.2:-5458224 | MS.gene00537:CDS |
CTCACTGTCTGTAACAAAGT+AGG | 0.452915 | 1.2:+5455949 | None:intergenic |
ATTGCAGCACTTAAGGCTCC+TGG | 0.453971 | 1.2:-5455648 | MS.gene00537:CDS |
CGTTCAAAAGGTGGAGTTGG+AGG | 0.454662 | 1.2:-5457689 | MS.gene00537:intron |
CCAGGTGGTTAGATGTTGCT+TGG | 0.456438 | 1.2:-5453516 | MS.gene00537:intron |
GCCTGCCAAATCATTTGTCT+TGG | 0.460705 | 1.2:+5457621 | None:intergenic |
TCTTATTGCAGAAGGTGTTA+AGG | 0.461521 | 1.2:-5457563 | MS.gene00537:intron |
TGGTGCTAAATTGGTTAGAC+AGG | 0.463771 | 1.2:-5457650 | MS.gene00537:CDS |
AAATGGAAGCGGAGGAAGAG+AGG | 0.465288 | 1.2:+5458497 | None:intergenic |
AGAAGATGGGAATGAAGAAA+TGG | 0.465700 | 1.2:+5458480 | None:intergenic |
TTGCCAACAGGTGCAGCCTC+AGG | 0.467059 | 1.2:+5453428 | None:intergenic |
AAAGGTGGAGTTGGAGGATC+CGG | 0.467134 | 1.2:-5457683 | MS.gene00537:intron |
TGCCAAATCATTTGTCTTGG+CGG | 0.470595 | 1.2:+5457624 | None:intergenic |
GAGTTGCATTTCAACAAAGA+TGG | 0.471240 | 1.2:-5458379 | MS.gene00537:CDS |
TTAGCACCAATATTCTCAAC+CGG | 0.473308 | 1.2:+5457664 | None:intergenic |
AGGGTATTGTAGTTGGTGGT+GGG | 0.474079 | 1.2:-5454640 | MS.gene00537:CDS |
GCCTTAGCTTAGACAAAGCT+GGG | 0.479147 | 1.2:-5455421 | MS.gene00537:CDS |
TATGAAGATTTGATGTCTGC+TGG | 0.479231 | 1.2:-5454153 | MS.gene00537:CDS |
TTTGTTGAAATGCAACTCCT+TGG | 0.479417 | 1.2:+5458384 | None:intergenic |
GATAGCTGAGGCGTTGAGTA+AGG | 0.484566 | 1.2:-5456071 | MS.gene00537:CDS |
AAAAGGAGAAGTTGAATGAA+AGG | 0.489096 | 1.2:-5454974 | MS.gene00537:CDS |
AAAGATACAACCACAATAGT+TGG | 0.489610 | 1.2:-5455359 | MS.gene00537:CDS |
GAAAGGATTGCAAAACTGTC+TGG | 0.490781 | 1.2:-5454957 | MS.gene00537:CDS |
GCAGGTTGAGGATAGTGAAT+TGG | 0.491700 | 1.2:-5456143 | MS.gene00537:intron |
TGCAAAACTGTCTGGTGGTG+TGG | 0.492146 | 1.2:-5454949 | MS.gene00537:CDS |
GTTAATAAGATCCCTTGCAT+TGG | 0.496312 | 1.2:+5455782 | None:intergenic |
TTAATTTCAGAGGGTAGCTA+AGG | 0.496676 | 1.2:+5454345 | None:intergenic |
TGGCAATATCATCAAGGTAC+TGG | 0.496736 | 1.2:+5455607 | None:intergenic |
CTCTTGCGTTCTCCAAATCC+AGG | 0.496984 | 1.2:+5455630 | None:intergenic |
CCTGGAGAGAGCGACGGTAC+TGG | 0.505757 | 1.2:+5458438 | None:intergenic |
GGTGTTACTCTTGGTCCTAA+GGG | 0.507915 | 1.2:-5458215 | MS.gene00537:CDS |
CCAGTACCGTCGCTCTCTCC+AGG | 0.507934 | 1.2:-5458438 | MS.gene00537:CDS |
TTTGCTCAGACTTGCATCAA+AGG | 0.510939 | 1.2:-5454612 | MS.gene00537:CDS |
TGCAGAACAAGATTATGAAA+AGG | 0.511288 | 1.2:-5454991 | MS.gene00537:CDS |
GCCAAGACAAATGATTTGGC+AGG | 0.513756 | 1.2:-5457622 | MS.gene00537:CDS |
TTGTCCATAGGGTTGCCAAC+AGG | 0.519465 | 1.2:+5453416 | None:intergenic |
TTGAGTAAGGTTGGTAGAAA+GGG | 0.519613 | 1.2:-5456058 | MS.gene00537:CDS |
ACAAATGATTTGGCAGGCGA+TGG | 0.521838 | 1.2:-5457616 | MS.gene00537:CDS |
TCCATATCTCGTATCGTCGT+TGG | 0.522924 | 1.2:+5454197 | None:intergenic |
TCTCCTAAGATTGTTAATGA+TGG | 0.522934 | 1.2:-5458161 | MS.gene00537:CDS |
CTTAGACAAAGCTGGGAATG+AGG | 0.523660 | 1.2:-5455414 | MS.gene00537:CDS |
TCACTGTCTGTAACAAAGTA+GGG | 0.525001 | 1.2:+5455950 | None:intergenic |
GGTTCTAGGCACTGCGGCCA+AGG | 0.525331 | 1.2:-5455393 | MS.gene00537:CDS |
TCCCAGCTTTGTCTAAGCTA+AGG | 0.526799 | 1.2:+5455420 | None:intergenic |
CCTTTAGGCCGCTGTTGAAG+AGG | 0.527246 | 1.2:-5454660 | MS.gene00537:intron |
TTCTGCGAGTGGAAGAAGAT+GGG | 0.529678 | 1.2:+5458467 | None:intergenic |
TTTCTGCGAGTGGAAGAAGA+TGG | 0.532066 | 1.2:+5458466 | None:intergenic |
TAAAGTCTCCGCCATGGCCA+AGG | 0.533355 | 1.2:-5458401 | MS.gene00537:CDS |
ATCTTTGGTGAGCACCACCT+TGG | 0.533468 | 1.2:+5455376 | None:intergenic |
AGAACAACATTCCTTCCCTT+AGG | 0.535555 | 1.2:+5458200 | None:intergenic |
ATACCACGTGTGATAAGCAC+AGG | 0.537355 | 1.2:+5457413 | None:intergenic |
GTTGAAGAGGGTATTGTAGT+TGG | 0.538398 | 1.2:-5454647 | MS.gene00537:CDS |
TGGGAATGAAGAAATGGAAG+CGG | 0.541881 | 1.2:+5458486 | None:intergenic |
GATGTGGCAGCAGTTAGTGC+AGG | 0.549028 | 1.2:-5456118 | MS.gene00537:CDS |
TGCACCTGTTGGCAACCCTA+TGG | 0.550758 | 1.2:-5453420 | MS.gene00537:CDS |
TTATAAACCTCCTGTCAAGA+TGG | 0.550939 | 1.2:+5455587 | None:intergenic |
CTTTAGGCCGCTGTTGAAGA+GGG | 0.553599 | 1.2:-5454659 | MS.gene00537:intron |
GCTCAAGGTCTTATTGCAGA+AGG | 0.554354 | 1.2:-5457571 | MS.gene00537:CDS |
ACTTCCATCACCAACTATTG+TGG | 0.557957 | 1.2:+5455349 | None:intergenic |
CTAGAGGACGCAATTAGAAA+CGG | 0.558599 | 1.2:-5455756 | MS.gene00537:CDS |
GAACCTGAGGCTGCACCTGT+TGG | 0.558717 | 1.2:-5453431 | MS.gene00537:CDS |
AACAAGCTTGCAGATTTGGT+TGG | 0.565866 | 1.2:-5458236 | MS.gene00537:CDS |
AAACAATCTGTATGTTGTTG+AGG | 0.570389 | 1.2:-5456002 | MS.gene00537:CDS |
AACAATCTGTATGTTGTTGA+GGG | 0.571719 | 1.2:-5456001 | MS.gene00537:CDS |
AAAGGGTGTCGTTACACTTG+AGG | 0.572247 | 1.2:-5456041 | MS.gene00537:CDS |
GAAGAGGGTATTGTAGTTGG+TGG | 0.573873 | 1.2:-5454644 | MS.gene00537:CDS |
TATGGATATAATGCTGCCAC+TGG | 0.574388 | 1.2:-5454180 | MS.gene00537:CDS |
ACTTAAACTAATGTCAAAAG+AGG | 0.575994 | 1.2:-5457360 | MS.gene00537:intron |
TTCCGCTATCAAGAAACTCC+AGG | 0.579355 | 1.2:-5458356 | MS.gene00537:intron |
GCTGAGGCGTTGAGTAAGGT+TGG | 0.581310 | 1.2:-5456067 | MS.gene00537:CDS |
ACATACCTGAATTGTCCATA+GGG | 0.583522 | 1.2:+5453405 | None:intergenic |
TGGCAGTGTTGTTAGTGAGA+AGG | 0.588442 | 1.2:-5454300 | MS.gene00537:intron |
TCTAGGCACTGCGGCCAAGG+TGG | 0.592690 | 1.2:-5455390 | MS.gene00537:CDS |
TGCTAAATTGGTTAGACAGG+CGG | 0.595682 | 1.2:-5457647 | MS.gene00537:CDS |
TTACTCTTGGTCCTAAGGGA+AGG | 0.596314 | 1.2:-5458211 | MS.gene00537:CDS |
TACATACCTGAATTGTCCAT+AGG | 0.599446 | 1.2:+5453404 | None:intergenic |
ACAACCACAATAGTTGGTGA+TGG | 0.599514 | 1.2:-5455353 | MS.gene00537:CDS |
GGGTGTCGTTACACTTGAGG+AGG | 0.602205 | 1.2:-5456038 | MS.gene00537:CDS |
GCAGGGAACAATCATGAGGT+AGG | 0.602361 | 1.2:-5456100 | MS.gene00537:CDS |
CACCTGGAGTTTCTTGATAG+CGG | 0.605493 | 1.2:+5458354 | None:intergenic |
ATGAAGATTTGATGTCTGCT+GGG | 0.605666 | 1.2:-5454152 | MS.gene00537:CDS |
TCAAGATGGCAATATCATCA+AGG | 0.606055 | 1.2:+5455601 | None:intergenic |
GCTCAGACTTGCATCAAAGG+TGG | 0.608186 | 1.2:-5454609 | MS.gene00537:CDS |
TCGCTCTCTCCAGGAAGAGT+CGG | 0.608851 | 1.2:-5458429 | MS.gene00537:CDS |
GATATTGCCATCTTGACAGG+AGG | 0.609386 | 1.2:-5455594 | MS.gene00537:intron |
TAATTTCAGAGGGTAGCTAA+GGG | 0.611417 | 1.2:+5454346 | None:intergenic |
TACAATACCCTCTTCAACAG+CGG | 0.611736 | 1.2:+5454652 | None:intergenic |
TCGTTACACTTGAGGAGGGA+AGG | 0.613492 | 1.2:-5456033 | MS.gene00537:CDS |
CTTGCAGTTCTCAAATTCAA+CGG | 0.614107 | 1.2:+5455919 | None:intergenic |
GGATAAATTTAATGATGCCA+TGG | 0.615836 | 1.2:+5458528 | None:intergenic |
ACAAACTGAGACAGAACTCA+AGG | 0.620054 | 1.2:-5454795 | MS.gene00537:CDS |
GAATGAAGAAATGGAAGCGG+AGG | 0.624472 | 1.2:+5458489 | None:intergenic |
AGGTACTGTTATCAGAGAGG+AGG | 0.632407 | 1.2:-5455447 | MS.gene00537:CDS |
GAAATGCAACTCCTTGGCCA+TGG | 0.632735 | 1.2:+5458390 | None:intergenic |
CAAATCTTCATATTTGCCAG+TGG | 0.633124 | 1.2:+5454164 | None:intergenic |
GGATAGTGAATTGGCTGATG+TGG | 0.636323 | 1.2:-5456134 | MS.gene00537:CDS |
TGGTGTCACTGTTGCCAAAG+AGG | 0.646809 | 1.2:-5458141 | MS.gene00537:intron |
AACCCTGTGCTTATCACACG+TGG | 0.648183 | 1.2:-5457416 | MS.gene00537:CDS |
ACTGTTATCAGAGAGGAGGT+TGG | 0.652322 | 1.2:-5455443 | MS.gene00537:CDS |
ATGCAACTCCTTGGCCATGG+CGG | 0.653898 | 1.2:+5458393 | None:intergenic |
GAACCTTAAAGTCTCCGCCA+TGG | 0.655961 | 1.2:-5458407 | MS.gene00537:CDS |
GAGGGCATGCAATTTGATCG+AGG | 0.658220 | 1.2:-5455983 | MS.gene00537:CDS |
ATGTGGCAGCAGTTAGTGCA+GGG | 0.658714 | 1.2:-5456117 | MS.gene00537:CDS |
GGAGGAAGAGAGGTTGCATG+AGG | 0.660744 | 1.2:+5458507 | None:intergenic |
AGACGCTCTTAACGCTACAA+AGG | 0.660955 | 1.2:-5454753 | MS.gene00537:intron |
TGGGATCATTGATCCTACAA+AGG | 0.667555 | 1.2:-5454133 | MS.gene00537:intron |
GGATCTTATTAACATACTAG+AGG | 0.670020 | 1.2:-5455772 | MS.gene00537:CDS |
GGTGTCGTTACACTTGAGGA+GGG | 0.689354 | 1.2:-5456037 | MS.gene00537:CDS |
GGTAGGAAATATGATAGCTG+AGG | 0.689740 | 1.2:-5456083 | MS.gene00537:CDS |
ACTCTTCCTGGAGAGAGCGA+CGG | 0.692153 | 1.2:+5458432 | None:intergenic |
CGTTGAATTTGAGAACTGCA+AGG | 0.697779 | 1.2:-5455918 | MS.gene00537:intron |
TAGTGCAGGGAACAATCATG+AGG | 0.700989 | 1.2:-5456104 | MS.gene00537:CDS |
TATAGGTACTGTTATCAGAG+AGG | 0.702894 | 1.2:-5455450 | MS.gene00537:intron |
TGTTGAGATAAAGGAACCTG+AGG | 0.713419 | 1.2:-5453444 | MS.gene00537:CDS |
AGGATTGCAAAACTGTCTGG+TGG | 0.719435 | 1.2:-5454954 | MS.gene00537:CDS |
ACCTTGAGCCAAAACAACAG+AGG | 0.725524 | 1.2:+5457585 | None:intergenic |
TACCACGTGTGATAAGCACA+GGG | 0.740125 | 1.2:+5457414 | None:intergenic |
GAATGAGGTTCTAGGCACTG+CGG | 0.821029 | 1.2:-5455399 | MS.gene00537:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATATGATATTATATACT+AGG | - | chr1.2:5458456-5458475 | MS.gene00537:CDS | 10.0% |
!! | CATAAAAAAAGAAAAAAAAA+AGG | + | chr1.2:5454881-5454900 | None:intergenic | 10.0% |
!!! | AAAGAAAAAATAAATCTTTT+TGG | + | chr1.2:5454508-5454527 | None:intergenic | 10.0% |
!!! | AGTTTTTTTTATTTTTCATA+TGG | - | chr1.2:5457040-5457059 | MS.gene00537:intron | 10.0% |
!!! | TTAAAAAATGAGAAATATTT+TGG | - | chr1.2:5456387-5456406 | MS.gene00537:intron | 10.0% |
!! | ACTATTAATGTAAAAAACAT+AGG | + | chr1.2:5455300-5455319 | None:intergenic | 15.0% |
!! | GATAAATTAATGAACATTAT+GGG | + | chr1.2:5456845-5456864 | None:intergenic | 15.0% |
!!! | AATAAATGATGGTATTTTTT+TGG | + | chr1.2:5458377-5458396 | None:intergenic | 15.0% |
!!! | ATTATATCACTTTATCTTTT+TGG | - | chr1.2:5454626-5454645 | MS.gene00537:CDS | 15.0% |
!!! | CTTATCAAATTATTTTGTAA+TGG | - | chr1.2:5454685-5454704 | MS.gene00537:intron | 15.0% |
!!! | GTTTTTGTAAATAAATAGTT+AGG | - | chr1.2:5455102-5455121 | MS.gene00537:intron | 15.0% |
!!! | GTTTTTTTAGATTGATTAAT+TGG | - | chr1.2:5455124-5455143 | MS.gene00537:intron | 15.0% |
!!! | TCTTTTTTTATGAATTGAAA+TGG | - | chr1.2:5454889-5454908 | MS.gene00537:intron | 15.0% |
!!! | TGTTAGTTTTGATTAAATTT+TGG | - | chr1.2:5457549-5457568 | MS.gene00537:intron | 15.0% |
!!! | TTTACAAAAAAAACAGATTT+TGG | + | chr1.2:5454801-5454820 | None:intergenic | 15.0% |
!! | AAAATGTCTACATATTATAC+AGG | - | chr1.2:5456544-5456563 | MS.gene00537:intron | 20.0% |
!! | AAATTAATAGCAAAAAATGC+TGG | - | chr1.2:5457230-5457249 | MS.gene00537:intron | 20.0% |
!! | AAGTTTAAATGAAAAAGATG+AGG | + | chr1.2:5455372-5455391 | None:intergenic | 20.0% |
!! | ACTAGAACATAAAATAAATC+AGG | + | chr1.2:5457726-5457745 | None:intergenic | 20.0% |
!! | ACTAGAGAAAAAAAAAATAC+AGG | + | chr1.2:5457469-5457488 | None:intergenic | 20.0% |
!! | AGTTTAAATGAAAAAGATGA+GGG | + | chr1.2:5455371-5455390 | None:intergenic | 20.0% |
!! | ATTTGTAAATTATGAAATGG+AGG | - | chr1.2:5454965-5454984 | MS.gene00537:CDS | 20.0% |
!! | CAAAATATGCAAAAAAATGT+GGG | + | chr1.2:5454301-5454320 | None:intergenic | 20.0% |
!! | CAGATTTGTAAATTATGAAA+TGG | - | chr1.2:5454962-5454981 | MS.gene00537:CDS | 20.0% |
!! | GGATAAATTAATGAACATTA+TGG | + | chr1.2:5456846-5456865 | None:intergenic | 20.0% |
!! | GTATAAAAATTGGCTAAATT+TGG | - | chr1.2:5457281-5457300 | MS.gene00537:intron | 20.0% |
!! | TAACTAATAAATGCTTGATT+TGG | - | chr1.2:5454046-5454065 | MS.gene00537:intron | 20.0% |
!! | TACACAAAAAAACAAGAAAA+CGG | + | chr1.2:5454230-5454249 | None:intergenic | 20.0% |
!! | TTCAATTGAGTTATTGTATT+TGG | - | chr1.2:5453527-5453546 | MS.gene00537:intron | 20.0% |
!! | TTCCTTAAAAAAATTGTATG+TGG | - | chr1.2:5457632-5457651 | MS.gene00537:CDS | 20.0% |
!! | TTTAGTGAATTAGTTATATG+TGG | - | chr1.2:5453818-5453837 | MS.gene00537:intron | 20.0% |
!!! | ACATTTTTTTGCATATTTTG+GGG | - | chr1.2:5454301-5454320 | MS.gene00537:CDS | 20.0% |
!!! | ACGATTTTTAAAACAATTCT+TGG | - | chr1.2:5457785-5457804 | MS.gene00537:intron | 20.0% |
!!! | AGAGTGAAATTTCATTTTAT+AGG | - | chr1.2:5454103-5454122 | MS.gene00537:intron | 20.0% |
!!! | CACATTTTTTTGCATATTTT+GGG | - | chr1.2:5454300-5454319 | MS.gene00537:intron | 20.0% |
!!! | CATTATAAATGGTTTGTATA+TGG | - | chr1.2:5457518-5457537 | MS.gene00537:intron | 20.0% |
!!! | TAAATTAAACTTAGCTTGTA+GGG | - | chr1.2:5457488-5457507 | MS.gene00537:intron | 20.0% |
!!! | TCATTAATTTATCCTTTTAC+TGG | - | chr1.2:5456852-5456871 | MS.gene00537:intron | 20.0% |
!!! | TTTACTTGAATTGTTGTTTT+TGG | - | chr1.2:5453665-5453684 | MS.gene00537:intron | 20.0% |
!!! | TTTTTCTCAATTTAGATGTA+GGG | - | chr1.2:5454711-5454730 | MS.gene00537:intron | 20.0% |
!!! | TTTTTGCTATTAATTTCAGA+GGG | + | chr1.2:5457226-5457245 | None:intergenic | 20.0% |
!!! | TTTTTTCTCAATTTAGATGT+AGG | - | chr1.2:5454710-5454729 | MS.gene00537:intron | 20.0% |
!!! | TTTTTTGCTATTAATTTCAG+AGG | + | chr1.2:5457227-5457246 | None:intergenic | 20.0% |
! | AATCTATAAATCACCTTTGT+AGG | + | chr1.2:5457442-5457461 | None:intergenic | 25.0% |
! | ACAAACCATTTATAATGATG+CGG | + | chr1.2:5457515-5457534 | None:intergenic | 25.0% |
! | ACAAATTAAGAACCAAATAG+AGG | - | chr1.2:5456262-5456281 | MS.gene00537:intron | 25.0% |
! | ACTTAAACTAATGTCAAAAG+AGG | - | chr1.2:5454199-5454218 | MS.gene00537:CDS | 25.0% |
! | AGAGTAATAGGAATAAATGA+TGG | + | chr1.2:5458388-5458407 | None:intergenic | 25.0% |
! | ATACATTTCCATTATTGACA+CGG | + | chr1.2:5458232-5458251 | None:intergenic | 25.0% |
! | ATATACAAGTGCATCTAAAT+AGG | + | chr1.2:5455192-5455211 | None:intergenic | 25.0% |
! | ATTTAAACTTAGAAGAGTTG+TGG | - | chr1.2:5455382-5455401 | MS.gene00537:CDS | 25.0% |
! | ATTTGTATGAATTAGTGTCT+AGG | - | chr1.2:5453502-5453521 | MS.gene00537:CDS | 25.0% |
! | CCAAAATATGCAAAAAAATG+TGG | + | chr1.2:5454302-5454321 | None:intergenic | 25.0% |
! | CCTTAAAATTCAAGATTCTT+AGG | + | chr1.2:5458433-5458452 | None:intergenic | 25.0% |
! | CTTAAAAAAATTGTATGTGG+AGG | - | chr1.2:5457635-5457654 | MS.gene00537:CDS | 25.0% |
! | GTAGAAATGATAATCAATGA+GGG | - | chr1.2:5454583-5454602 | MS.gene00537:CDS | 25.0% |
! | TAGAAATGATAATCAATGAG+GGG | - | chr1.2:5454584-5454603 | MS.gene00537:CDS | 25.0% |
! | TATACAAGTGCATCTAAATA+GGG | + | chr1.2:5455191-5455210 | None:intergenic | 25.0% |
! | TGGCAAAGATAATAATAAGT+TGG | + | chr1.2:5455689-5455708 | None:intergenic | 25.0% |
! | TGTAGAAATGATAATCAATG+AGG | - | chr1.2:5454582-5454601 | MS.gene00537:CDS | 25.0% |
! | TTACTTATTCTTCATGTACA+AGG | + | chr1.2:5456359-5456378 | None:intergenic | 25.0% |
! | TTGTTTGTGAATTAGTTATG+TGG | - | chr1.2:5453739-5453758 | MS.gene00537:intron | 25.0% |
! | TTTGGTGAATTAGTTATGTA+GGG | - | chr1.2:5453605-5453624 | MS.gene00537:intron | 25.0% |
!! | ATGGAGATAATTTTCGTTTT+AGG | - | chr1.2:5457059-5457078 | MS.gene00537:intron | 25.0% |
!! | CATATTTTGTAAAACGTTGT+TGG | - | chr1.2:5458486-5458505 | MS.gene00537:CDS | 25.0% |
!! | CCTAAGAATCTTGAATTTTA+AGG | - | chr1.2:5458430-5458449 | MS.gene00537:CDS | 25.0% |
!! | GTTTAAGCATTTTTATTCCA+CGG | - | chr1.2:5454255-5454274 | MS.gene00537:intron | 25.0% |
!! | GTTTATTGTTTCTCAAAACT+GGG | + | chr1.2:5455046-5455065 | None:intergenic | 25.0% |
!! | TAAGTAAAAACACAAGTTGA+TGG | + | chr1.2:5455709-5455728 | None:intergenic | 25.0% |
!! | TAGTGAGAAGGTATAAAAAT+TGG | - | chr1.2:5457271-5457290 | MS.gene00537:intron | 25.0% |
!! | TTTAAGCATTTTTATTCCAC+GGG | - | chr1.2:5454256-5454275 | MS.gene00537:intron | 25.0% |
!! | TTTACTTGAATCACTGTTTT+TGG | - | chr1.2:5453587-5453606 | MS.gene00537:intron | 25.0% |
!! | TTTATTGTTTCTCAAAACTG+GGG | + | chr1.2:5455045-5455064 | None:intergenic | 25.0% |
!! | TTTTCTCAATTTAGATGTAG+GGG | - | chr1.2:5454712-5454731 | MS.gene00537:intron | 25.0% |
!! | TTTTGGTGAATTAGTTATGT+AGG | - | chr1.2:5453604-5453623 | MS.gene00537:intron | 25.0% |
!! | TTTTTCTTCATCATTTGCAA+GGG | + | chr1.2:5456991-5457010 | None:intergenic | 25.0% |
!!! | ATCTGTTTTTTTTGTAAACC+CGG | - | chr1.2:5454803-5454822 | MS.gene00537:CDS | 25.0% |
!!! | ATGTTCTAGTTTCTTGATTA+GGG | - | chr1.2:5457736-5457755 | MS.gene00537:intron | 25.0% |
!!! | CCACATTTTTTTGCATATTT+TGG | - | chr1.2:5454299-5454318 | MS.gene00537:intron | 25.0% |
!!! | CTCCACATACAATTTTTTTA+AGG | + | chr1.2:5457637-5457656 | None:intergenic | 25.0% |
!!! | GTAAATTAAACTTAGCTTGT+AGG | - | chr1.2:5457487-5457506 | MS.gene00537:intron | 25.0% |
!!! | TATGTTCTAGTTTCTTGATT+AGG | - | chr1.2:5457735-5457754 | MS.gene00537:intron | 25.0% |
!!! | TTCTTCATTTGTTCCTTTTT+TGG | - | chr1.2:5456047-5456066 | MS.gene00537:CDS | 25.0% |
!!! | TTGCTTGTTGTTACATAATT+GGG | - | chr1.2:5454071-5454090 | MS.gene00537:intron | 25.0% |
!!! | TTTATCTTTTTGGTTGTGTA+CGG | - | chr1.2:5454636-5454655 | MS.gene00537:CDS | 25.0% |
!!! | TTTGCTTGTTGTTACATAAT+TGG | - | chr1.2:5454070-5454089 | MS.gene00537:intron | 25.0% |
!!! | TTTGTGTTTTTGTTACAGAA+TGG | - | chr1.2:5453296-5453315 | MS.gene00537:intron | 25.0% |
!!! | TTTTGTTTTGTTACGAGTAT+AGG | - | chr1.2:5456734-5456753 | MS.gene00537:intron | 25.0% |
AAAAAAATGTGGGAAGTTTG+TGG | + | chr1.2:5454291-5454310 | None:intergenic | 30.0% | |
AAAAGGAGAAGTTGAATGAA+AGG | - | chr1.2:5456585-5456604 | MS.gene00537:intron | 30.0% | |
AAACAATCTGTATGTTGTTG+AGG | - | chr1.2:5455557-5455576 | MS.gene00537:intron | 30.0% | |
AAAGATACAACCACAATAGT+TGG | - | chr1.2:5456200-5456219 | MS.gene00537:intron | 30.0% | |
AACAATCTGTATGTTGTTGA+GGG | - | chr1.2:5455558-5455577 | MS.gene00537:intron | 30.0% | |
AACAGTACCTATAAGTGAAT+TGG | + | chr1.2:5456102-5456121 | None:intergenic | 30.0% | |
AACTATTGTGGTTGTATCTT+TGG | + | chr1.2:5456201-5456220 | None:intergenic | 30.0% | |
AAGTTATAGTTCATGTGAAC+CGG | - | chr1.2:5455152-5455171 | MS.gene00537:intron | 30.0% | |
AATCATATGAATAGCAGAAG+AGG | - | chr1.2:5454995-5455014 | MS.gene00537:CDS | 30.0% | |
ACAAAAAGATATCCAATGCA+AGG | - | chr1.2:5455765-5455784 | MS.gene00537:CDS | 30.0% | |
ACACCATCATTAACAATCTT+AGG | + | chr1.2:5453404-5453423 | None:intergenic | 30.0% | |
ACAGTACCTATAAGTGAATT+GGG | + | chr1.2:5456101-5456120 | None:intergenic | 30.0% | |
ACTGAACCAAATTTATGGTT+CGG | - | chr1.2:5454751-5454770 | MS.gene00537:intron | 30.0% | |
AGTTTCTTGATTAGGGAAAT+TGG | - | chr1.2:5457743-5457762 | MS.gene00537:intron | 30.0% | |
ATACAAGTGCATCTAAATAG+GGG | + | chr1.2:5455190-5455209 | None:intergenic | 30.0% | |
ATCATATGAATAGCAGAAGA+GGG | - | chr1.2:5454996-5455015 | MS.gene00537:CDS | 30.0% | |
CAAAAAGATATCCAATGCAA+GGG | - | chr1.2:5455766-5455785 | MS.gene00537:CDS | 30.0% | |
CAAACCATTTATAATGATGC+GGG | + | chr1.2:5457514-5457533 | None:intergenic | 30.0% | |
CATGAACTGAACCAAATTTA+TGG | - | chr1.2:5454746-5454765 | MS.gene00537:intron | 30.0% | |
CCTCTGCAATTATCAAAATA+GGG | + | chr1.2:5455832-5455851 | None:intergenic | 30.0% | |
GGATCTTATTAACATACTAG+AGG | - | chr1.2:5455787-5455806 | MS.gene00537:CDS | 30.0% | |
GGTTCAATACGATTCAAAAT+CGG | - | chr1.2:5454824-5454843 | MS.gene00537:intron | 30.0% | |
GTTCATTGCTTAGCAATTAT+TGG | - | chr1.2:5454325-5454344 | MS.gene00537:CDS | 30.0% | |
GTTTCTTGATTAGGGAAATT+GGG | - | chr1.2:5457744-5457763 | MS.gene00537:intron | 30.0% | |
TAATTTCAACCCAGAATTGA+AGG | + | chr1.2:5454934-5454953 | None:intergenic | 30.0% | |
TATCTTCCCAATTCACTTAT+AGG | - | chr1.2:5456092-5456111 | MS.gene00537:CDS | 30.0% | |
TATGAAACACAAACACCTTT+GGG | - | chr1.2:5454404-5454423 | MS.gene00537:intron | 30.0% | |
TCATGCATATTGTTGCAAAA+TGG | - | chr1.2:5457599-5457618 | MS.gene00537:CDS | 30.0% | |
TCCTCTGCAATTATCAAAAT+AGG | + | chr1.2:5455833-5455852 | None:intergenic | 30.0% | |
TCTCCTAAGATTGTTAATGA+TGG | - | chr1.2:5453398-5453417 | MS.gene00537:intron | 30.0% | |
TGATTTAAGAACCTCGTATT+TGG | + | chr1.2:5457582-5457601 | None:intergenic | 30.0% | |
TGCAGAACAAGATTATGAAA+AGG | - | chr1.2:5456568-5456587 | MS.gene00537:intron | 30.0% | |
TTTCTTGATTAGGGAAATTG+GGG | - | chr1.2:5457745-5457764 | MS.gene00537:intron | 30.0% | |
! | ATTTTGAATCGTATTGAACC+GGG | + | chr1.2:5454824-5454843 | None:intergenic | 30.0% |
! | CTCATATTTTCTTCACCTTT+AGG | - | chr1.2:5456884-5456903 | MS.gene00537:intron | 30.0% |
! | CTTTTTCTTCATCATTTGCA+AGG | + | chr1.2:5456992-5457011 | None:intergenic | 30.0% |
! | GATGTAATTTGTATATCGGT+AGG | - | chr1.2:5457333-5457352 | MS.gene00537:intron | 30.0% |
! | GATTTTGAATCGTATTGAAC+CGG | + | chr1.2:5454825-5454844 | None:intergenic | 30.0% |
! | GCCATGCAAACAATTTTTAA+GGG | + | chr1.2:5456319-5456338 | None:intergenic | 30.0% |
! | GGTTTATTGTTTCTCAAAAC+TGG | + | chr1.2:5455047-5455066 | None:intergenic | 30.0% |
! | TGATTTGCAGAGAAGTTAAA+AGG | + | chr1.2:5456698-5456717 | None:intergenic | 30.0% |
! | TGCCATGCAAACAATTTTTA+AGG | + | chr1.2:5456320-5456339 | None:intergenic | 30.0% |
!! | AAAACATTAGCCTTCAATTC+TGG | - | chr1.2:5454921-5454940 | MS.gene00537:intron | 30.0% |
!! | AAACATTAGCCTTCAATTCT+GGG | - | chr1.2:5454922-5454941 | MS.gene00537:intron | 30.0% |
!! | ATTTAATTTGTCCGAGTGTA+AGG | - | chr1.2:5453694-5453713 | MS.gene00537:intron | 30.0% |
!! | ATTTGATTTGTCTGAGTTCA+GGG | - | chr1.2:5453556-5453575 | MS.gene00537:intron | 30.0% |
!! | CCATGCAAACAATTTTTAAG+GGG | + | chr1.2:5456318-5456337 | None:intergenic | 30.0% |
!! | TAAATTTGTTGAAGTCTCAC+TGG | - | chr1.2:5457678-5457697 | MS.gene00537:CDS | 30.0% |
!! | TATTTGATTTGTCTGAGTTC+AGG | - | chr1.2:5453555-5453574 | MS.gene00537:intron | 30.0% |
!! | TGAGAATATTGGTGCTAAAT+TGG | - | chr1.2:5453900-5453919 | MS.gene00537:intron | 30.0% |
!! | TGCTTGTTGTTACATAATTG+GGG | - | chr1.2:5454072-5454091 | MS.gene00537:intron | 30.0% |
!! | TTTAATTTGTCCGAGTGTAA+GGG | - | chr1.2:5453695-5453714 | MS.gene00537:intron | 30.0% |
!!! | TTGTTCCTTTTTTGGTTTAG+CGG | - | chr1.2:5456055-5456074 | MS.gene00537:CDS | 30.0% |
AAATCTTAGACCCTTACACT+CGG | + | chr1.2:5453708-5453727 | None:intergenic | 35.0% | |
AATTGTATGTGGAGGATGTT+AGG | - | chr1.2:5457643-5457662 | MS.gene00537:CDS | 35.0% | |
ACAGTTACACACAGAGTAAT+AGG | + | chr1.2:5458400-5458419 | None:intergenic | 35.0% | |
ACATACCTGAATTGTCCATA+GGG | + | chr1.2:5458157-5458176 | None:intergenic | 35.0% | |
ACTGAACCGAACCATAAATT+TGG | + | chr1.2:5454760-5454779 | None:intergenic | 35.0% | |
AGAAGATGGGAATGAAGAAA+TGG | + | chr1.2:5453082-5453101 | None:intergenic | 35.0% | |
ATGAAGATTTGATGTCTGCT+GGG | - | chr1.2:5457407-5457426 | MS.gene00537:CDS | 35.0% | |
CAAATCTTCATATTTGCCAG+TGG | + | chr1.2:5457398-5457417 | None:intergenic | 35.0% | |
CAATAAGAAACACACCTCTT+TGG | + | chr1.2:5453435-5453454 | None:intergenic | 35.0% | |
CATACGAGTGGTCATATATA+AGG | - | chr1.2:5456468-5456487 | MS.gene00537:intron | 35.0% | |
CCCCTTAAAAATTGTTTGCA+TGG | - | chr1.2:5456315-5456334 | MS.gene00537:intron | 35.0% | |
CTATGAAACACAAACACCTT+TGG | - | chr1.2:5454403-5454422 | MS.gene00537:intron | 35.0% | |
CTTGATACGAAACTTTGACT+TGG | - | chr1.2:5457893-5457912 | MS.gene00537:intron | 35.0% | |
CTTGCAGTTCTCAAATTCAA+CGG | + | chr1.2:5455643-5455662 | None:intergenic | 35.0% | |
GAGTTGCATTTCAACAAAGA+TGG | - | chr1.2:5453180-5453199 | MS.gene00537:intron | 35.0% | |
GCAAAAAATGCTGGTGTAAA+TGG | - | chr1.2:5457239-5457258 | MS.gene00537:intron | 35.0% | |
GGATATTGAACAAGAAGCTT+TGG | - | chr1.2:5455850-5455869 | MS.gene00537:intron | 35.0% | |
GTATGCTGCATACATACATT+TGG | + | chr1.2:5456453-5456472 | None:intergenic | 35.0% | |
GTTAATAAGATCCCTTGCAT+TGG | + | chr1.2:5455780-5455799 | None:intergenic | 35.0% | |
TAAGCATTCACACACATAGA+AGG | + | chr1.2:5457945-5457964 | None:intergenic | 35.0% | |
TAATTTCAGAGGGTAGCTAA+GGG | + | chr1.2:5457216-5457235 | None:intergenic | 35.0% | |
TACATACCTGAATTGTCCAT+AGG | + | chr1.2:5458158-5458177 | None:intergenic | 35.0% | |
TATGAAGATTTGATGTCTGC+TGG | - | chr1.2:5457406-5457425 | MS.gene00537:CDS | 35.0% | |
TCAAGATGGCAATATCATCA+AGG | + | chr1.2:5455961-5455980 | None:intergenic | 35.0% | |
TCACTGTCTGTAACAAAGTA+GGG | + | chr1.2:5455612-5455631 | None:intergenic | 35.0% | |
TCATATGAATAGCAGAAGAG+GGG | - | chr1.2:5454997-5455016 | MS.gene00537:intron | 35.0% | |
TGTTTGCATTTGCGTTCAAA+AGG | - | chr1.2:5453858-5453877 | MS.gene00537:intron | 35.0% | |
TTAATTTCAGAGGGTAGCTA+AGG | + | chr1.2:5457217-5457236 | None:intergenic | 35.0% | |
TTAGCACCAATATTCTCAAC+CGG | + | chr1.2:5453898-5453917 | None:intergenic | 35.0% | |
TTATAAACCTCCTGTCAAGA+TGG | + | chr1.2:5455975-5455994 | None:intergenic | 35.0% | |
TTATAATTAAAACGCGACGC+AGG | - | chr1.2:5457166-5457185 | MS.gene00537:intron | 35.0% | |
TTCTATTGCCGTGTCAATAA+TGG | - | chr1.2:5458221-5458240 | MS.gene00537:CDS | 35.0% | |
TTGGAGTTATGCATAACGTT+AGG | - | chr1.2:5456406-5456425 | MS.gene00537:intron | 35.0% | |
TTTGTTGAAATGCAACTCCT+TGG | + | chr1.2:5453178-5453197 | None:intergenic | 35.0% | |
! | ATTTTATAGGTTGTTGCAGC+AGG | - | chr1.2:5454116-5454135 | MS.gene00537:intron | 35.0% |
! | CTGTGTTGTTGTTGAGATAA+AGG | - | chr1.2:5458106-5458125 | MS.gene00537:intron | 35.0% |
! | CTTGTTGTGAACAAACTTAG+AGG | - | chr1.2:5455878-5455897 | MS.gene00537:intron | 35.0% |
! | CTTTCTTTTCTCCTAGGATT+CGG | - | chr1.2:5458519-5458538 | MS.gene00537:CDS | 35.0% |
! | TATAGGTACTGTTATCAGAG+AGG | - | chr1.2:5456109-5456128 | MS.gene00537:CDS | 35.0% |
! | TCTCACTGGACTTTTAATGT+GGG | - | chr1.2:5457692-5457711 | MS.gene00537:intron | 35.0% |
!! | AACTACTACCTCTGTTGTTT+TGG | - | chr1.2:5453966-5453985 | MS.gene00537:intron | 35.0% |
!! | CAAAGGTGTTTGTGTTTCAT+AGG | + | chr1.2:5454405-5454424 | None:intergenic | 35.0% |
!! | GTTTTGTTACGAGTATAGGT+TGG | - | chr1.2:5456738-5456757 | MS.gene00537:intron | 35.0% |
!! | TCTTATTGCAGAAGGTGTTA+AGG | - | chr1.2:5453996-5454015 | MS.gene00537:intron | 35.0% |
!! | TGCAAACAATTTTTAAGGGG+TGG | + | chr1.2:5456315-5456334 | None:intergenic | 35.0% |
!! | TTGAGTAAGGTTGGTAGAAA+GGG | - | chr1.2:5455501-5455520 | MS.gene00537:intron | 35.0% |
!! | TTTTGATGTGGGGTGTTTAA+GGG | - | chr1.2:5453634-5453653 | MS.gene00537:intron | 35.0% |
!!! | CCCTATTTTGATAATTGCAG+AGG | - | chr1.2:5455829-5455848 | MS.gene00537:intron | 35.0% |
!!! | TAGGGTGTTTGTTTTGATGT+GGG | - | chr1.2:5453623-5453642 | MS.gene00537:intron | 35.0% |
!!! | TGGAGTGTTTGTTTTGATGT+GGG | - | chr1.2:5453759-5453778 | MS.gene00537:intron | 35.0% |
AAGAGAGGGAAACCTCTATT+TGG | + | chr1.2:5456277-5456296 | None:intergenic | 40.0% | |
ACAAACTGAGACAGAACTCA+AGG | - | chr1.2:5456764-5456783 | MS.gene00537:intron | 40.0% | |
ACCAACCGCTAAACCAAAAA+AGG | + | chr1.2:5456063-5456082 | None:intergenic | 40.0% | |
ACGATTCAAAATCGGTGAAC+TGG | - | chr1.2:5454832-5454851 | MS.gene00537:intron | 40.0% | |
ACTGAAGATTGCAGCACTTA+AGG | - | chr1.2:5455904-5455923 | MS.gene00537:intron | 40.0% | |
ACTTCCATCACCAACTATTG+TGG | + | chr1.2:5456213-5456232 | None:intergenic | 40.0% | |
AGAACAACATTCCTTCCCTT+AGG | + | chr1.2:5453362-5453381 | None:intergenic | 40.0% | |
AGGCAGAAACATGCACAATA+AGG | + | chr1.2:5457817-5457836 | None:intergenic | 40.0% | |
ATGATTGTGAATAACCCACC+TGG | + | chr1.2:5453224-5453243 | None:intergenic | 40.0% | |
CAACATGTCTGCATCATGTT+AGG | - | chr1.2:5455322-5455341 | MS.gene00537:CDS | 40.0% | |
CGAATCCTAGGAGAAAAGAA+AGG | + | chr1.2:5458521-5458540 | None:intergenic | 40.0% | |
CGTTGAATTTGAGAACTGCA+AGG | - | chr1.2:5455641-5455660 | MS.gene00537:CDS | 40.0% | |
CTAGAGGACGCAATTAGAAA+CGG | - | chr1.2:5455803-5455822 | MS.gene00537:CDS | 40.0% | |
CTCACTGTCTGTAACAAAGT+AGG | + | chr1.2:5455613-5455632 | None:intergenic | 40.0% | |
GAAAGGATTGCAAAACTGTC+TGG | - | chr1.2:5456602-5456621 | MS.gene00537:intron | 40.0% | |
GAGCTTATCGAACCAGTAAA+AGG | + | chr1.2:5456867-5456886 | None:intergenic | 40.0% | |
GATGATATTGCCATCTTGAC+AGG | - | chr1.2:5455962-5455981 | MS.gene00537:CDS | 40.0% | |
GCTAAGCAATGTAATCCCAA+AGG | + | chr1.2:5454374-5454393 | None:intergenic | 40.0% | |
GGTAGGAAATATGATAGCTG+AGG | - | chr1.2:5455476-5455495 | MS.gene00537:intron | 40.0% | |
GGTTGTGTACGGATAAATGA+AGG | - | chr1.2:5454647-5454666 | MS.gene00537:CDS | 40.0% | |
GTTGTTCTTGAGAGCAAGTA+TGG | - | chr1.2:5453374-5453393 | MS.gene00537:intron | 40.0% | |
TAAGCATTCACACGCATAGA+AGG | + | chr1.2:5457837-5457856 | None:intergenic | 40.0% | |
TACAATACCCTCTTCAACAG+CGG | + | chr1.2:5456910-5456929 | None:intergenic | 40.0% | |
TACTCCTTGAACACATCTGT+GGG | - | chr1.2:5454546-5454565 | MS.gene00537:intron | 40.0% | |
TATGGATATAATGCTGCCAC+TGG | - | chr1.2:5457379-5457398 | MS.gene00537:CDS | 40.0% | |
TCGCTTTGTAACTGCTTCTT+GGG | + | chr1.2:5456237-5456256 | None:intergenic | 40.0% | |
TCTTTGCTTCAACATGCCTT+AGG | - | chr1.2:5454523-5454542 | MS.gene00537:intron | 40.0% | |
TGCCAAATCATTTGTCTTGG+CGG | + | chr1.2:5453938-5453957 | None:intergenic | 40.0% | |
TGCTAAATTGGTTAGACAGG+CGG | - | chr1.2:5453912-5453931 | MS.gene00537:intron | 40.0% | |
TGGCAATATCATCAAGGTAC+TGG | + | chr1.2:5455955-5455974 | None:intergenic | 40.0% | |
TGGGAATGAAGAAATGGAAG+CGG | + | chr1.2:5453076-5453095 | None:intergenic | 40.0% | |
TGGGATCATTGATCCTACAA+AGG | - | chr1.2:5457426-5457445 | MS.gene00537:CDS | 40.0% | |
TGTGAACAAGCTTGCAGATT+TGG | - | chr1.2:5453319-5453338 | MS.gene00537:intron | 40.0% | |
TGTTGAGATAAAGGAACCTG+AGG | - | chr1.2:5458115-5458134 | MS.gene00537:intron | 40.0% | |
TTGCATTTGCGTTCAAAAGG+TGG | - | chr1.2:5453861-5453880 | MS.gene00537:intron | 40.0% | |
TTGGTTTCGTACCAAATACG+AGG | - | chr1.2:5457568-5457587 | MS.gene00537:CDS | 40.0% | |
TTTGCTCAGACTTGCATCAA+AGG | - | chr1.2:5456947-5456966 | MS.gene00537:intron | 40.0% | |
! | AACAAGCTTGCAGATTTGGT+TGG | - | chr1.2:5453323-5453342 | MS.gene00537:intron | 40.0% |
! | ATAGGGGTGTGCATAAAAAC+CGG | + | chr1.2:5455174-5455193 | None:intergenic | 40.0% |
! | ATTTTTATTCCACGGGCTTC+TGG | - | chr1.2:5454263-5454282 | MS.gene00537:intron | 40.0% |
! | GTCTCACTGGACTTTTAATG+TGG | - | chr1.2:5457691-5457710 | MS.gene00537:intron | 40.0% |
! | TATGAAGCACTAACGCCTTT+GGG | - | chr1.2:5454356-5454375 | MS.gene00537:CDS | 40.0% |
! | TGGTGCTAAATTGGTTAGAC+AGG | - | chr1.2:5453909-5453928 | MS.gene00537:intron | 40.0% |
!! | ACAACCACAATAGTTGGTGA+TGG | - | chr1.2:5456206-5456225 | MS.gene00537:intron | 40.0% |
!! | ACACAAACACCTTTGGGATT+AGG | - | chr1.2:5454410-5454429 | MS.gene00537:intron | 40.0% |
!! | ATGTGTTCAAGGAGTACCTA+AGG | + | chr1.2:5454542-5454561 | None:intergenic | 40.0% |
!! | ATTTTTAAGGGGTGGAGAGA+CGG | + | chr1.2:5456307-5456326 | None:intergenic | 40.0% |
!! | GATTTGGTTGGTGTTACTCT+TGG | - | chr1.2:5453335-5453354 | MS.gene00537:intron | 40.0% |
!! | GTTGAAGAGGGTATTGTAGT+TGG | - | chr1.2:5456912-5456931 | MS.gene00537:intron | 40.0% |
!! | GTTGAGTAAGGTTGGTAGAA+AGG | - | chr1.2:5455500-5455519 | MS.gene00537:intron | 40.0% |
!! | GTTTTGATGTGGGGTGTTTA+AGG | - | chr1.2:5453633-5453652 | MS.gene00537:intron | 40.0% |
!! | GTTTTGATGTGGGGTGTTTA+GGG | - | chr1.2:5453633-5453652 | MS.gene00537:intron | 40.0% |
!!! | AGGGTGTTTGTTTTGATGTG+GGG | - | chr1.2:5453624-5453643 | MS.gene00537:intron | 40.0% |
!!! | GGAGTGTTTGTTTTGATGTG+GGG | - | chr1.2:5453760-5453779 | MS.gene00537:intron | 40.0% |
!!! | GTAGGGTGTTTGTTTTGATG+TGG | - | chr1.2:5453622-5453641 | MS.gene00537:intron | 40.0% |
!!! | GTGGAGTGTTTGTTTTGATG+TGG | - | chr1.2:5453758-5453777 | MS.gene00537:intron | 40.0% |
!!! | TCCTTTTTTGGTTTAGCGGT+TGG | - | chr1.2:5456059-5456078 | MS.gene00537:CDS | 40.0% |
!!! | TGTTTTGATGTGGGGTGTTT+AGG | - | chr1.2:5453632-5453651 | MS.gene00537:intron | 40.0% |
AAAGCTGGGAATGAGGTTCT+AGG | - | chr1.2:5456152-5456171 | MS.gene00537:intron | 45.0% | |
AATTAAAACGCGACGCAGGT+TGG | - | chr1.2:5457170-5457189 | MS.gene00537:intron | 45.0% | |
ACCTTGAGCCAAAACAACAG+AGG | + | chr1.2:5453977-5453996 | None:intergenic | 45.0% | |
ACTCCTTGAACACATCTGTG+GGG | - | chr1.2:5454547-5454566 | MS.gene00537:intron | 45.0% | |
ACTGTTATCAGAGAGGAGGT+TGG | - | chr1.2:5456116-5456135 | MS.gene00537:CDS | 45.0% | |
AGACGCTCTTAACGCTACAA+AGG | - | chr1.2:5456806-5456825 | MS.gene00537:intron | 45.0% | |
AGGATTGCAAAACTGTCTGG+TGG | - | chr1.2:5456605-5456624 | MS.gene00537:intron | 45.0% | |
AGGGCCCGCATCATTATAAA+TGG | - | chr1.2:5457507-5457526 | MS.gene00537:intron | 45.0% | |
ATACCACGTGTGATAAGCAC+AGG | + | chr1.2:5454149-5454168 | None:intergenic | 45.0% | |
CACCTGGAGTTTCTTGATAG+CGG | + | chr1.2:5453208-5453227 | None:intergenic | 45.0% | |
CAGAAGAGGGGTTGTGAAAT+GGG | - | chr1.2:5455009-5455028 | MS.gene00537:intron | 45.0% | |
CATTCGAATCGTCGAGTTTG+CGG | - | chr1.2:5458189-5458208 | MS.gene00537:CDS | 45.0% | |
CTAACCACCTGGACAAGATT+AGG | + | chr1.2:5458035-5458054 | None:intergenic | 45.0% | |
CTCGCTTTGTAACTGCTTCT+TGG | + | chr1.2:5456238-5456257 | None:intergenic | 45.0% | |
CTTAGACAAAGCTGGGAATG+AGG | - | chr1.2:5456145-5456164 | MS.gene00537:intron | 45.0% | |
GAATGAAGAAATGGAAGCGG+AGG | + | chr1.2:5453073-5453092 | None:intergenic | 45.0% | |
GAGACAAAGCCTAATCCCAA+AGG | + | chr1.2:5454422-5454441 | None:intergenic | 45.0% | |
GAGGATCCGGTTGAGAATAT+TGG | - | chr1.2:5453889-5453908 | MS.gene00537:intron | 45.0% | |
GATATTGCCATCTTGACAGG+AGG | - | chr1.2:5455965-5455984 | MS.gene00537:CDS | 45.0% | |
GCCTGCCAAATCATTTGTCT+TGG | + | chr1.2:5453941-5453960 | None:intergenic | 45.0% | |
GCCTTAGCTTAGACAAAGCT+GGG | - | chr1.2:5456138-5456157 | MS.gene00537:CDS | 45.0% | |
GCTATCAAGAAACTCCAGGT+GGG | - | chr1.2:5453207-5453226 | MS.gene00537:intron | 45.0% | |
GGATAGTGAATTGGCTGATG+TGG | - | chr1.2:5455425-5455444 | MS.gene00537:CDS | 45.0% | |
GTACTCCTTGAACACATCTG+TGG | - | chr1.2:5454545-5454564 | MS.gene00537:intron | 45.0% | |
GTATGTATGCAGCATACGAG+TGG | - | chr1.2:5456456-5456475 | MS.gene00537:intron | 45.0% | |
GTTGTGGTTGTGTGAATTGC+AGG | - | chr1.2:5455398-5455417 | MS.gene00537:CDS | 45.0% | |
GTTGTGTGAATTGCAGGTTG+AGG | - | chr1.2:5455404-5455423 | MS.gene00537:CDS | 45.0% | |
TAACACACACACACACACAC+AGG | - | chr1.2:5455265-5455284 | MS.gene00537:intron | 45.0% | |
TAACCCCACAGATGTGTTCA+AGG | + | chr1.2:5454553-5454572 | None:intergenic | 45.0% | |
TACCACGTGTGATAAGCACA+GGG | + | chr1.2:5454148-5454167 | None:intergenic | 45.0% | |
TAGTGCAGGGAACAATCATG+AGG | - | chr1.2:5455455-5455474 | MS.gene00537:intron | 45.0% | |
TCCAACGACGATACGAGATA+TGG | - | chr1.2:5457361-5457380 | MS.gene00537:CDS | 45.0% | |
TCCATATCTCGTATCGTCGT+TGG | + | chr1.2:5457365-5457384 | None:intergenic | 45.0% | |
TTACTCTTGGTCCTAAGGGA+AGG | - | chr1.2:5453348-5453367 | MS.gene00537:intron | 45.0% | |
TTCCGCTATCAAGAAACTCC+AGG | - | chr1.2:5453203-5453222 | MS.gene00537:intron | 45.0% | |
TTCTGCGAGTGGAAGAAGAT+GGG | + | chr1.2:5453095-5453114 | None:intergenic | 45.0% | |
TTGCGTTCAAAAGGTGGAGT+TGG | - | chr1.2:5453867-5453886 | MS.gene00537:intron | 45.0% | |
TTTCTGCGAGTGGAAGAAGA+TGG | + | chr1.2:5453096-5453115 | None:intergenic | 45.0% | |
! | ACAAATGATTTGGCAGGCGA+TGG | - | chr1.2:5453943-5453962 | MS.gene00537:intron | 45.0% |
! | ACTGGTAGTTTTTCTGCGAG+TGG | + | chr1.2:5453106-5453125 | None:intergenic | 45.0% |
! | AGGTACTGTTATCAGAGAGG+AGG | - | chr1.2:5456112-5456131 | MS.gene00537:CDS | 45.0% |
! | CTATGAAGCACTAACGCCTT+TGG | - | chr1.2:5454355-5454374 | MS.gene00537:CDS | 45.0% |
! | CTCTGCCTTTCTTTTCTCCT+AGG | - | chr1.2:5458513-5458532 | MS.gene00537:CDS | 45.0% |
! | GAAGCATCCTAATCTTGTCC+AGG | - | chr1.2:5458025-5458044 | MS.gene00537:intron | 45.0% |
! | GCAGGTTGAGGATAGTGAAT+TGG | - | chr1.2:5455416-5455435 | MS.gene00537:CDS | 45.0% |
! | GCCAAGACAAATGATTTGGC+AGG | - | chr1.2:5453937-5453956 | MS.gene00537:intron | 45.0% |
! | TCCCAGCTTTGTCTAAGCTA+AGG | + | chr1.2:5456142-5456161 | None:intergenic | 45.0% |
! | TCTCCTAGGATTCGGTATGT+AGG | - | chr1.2:5458527-5458546 | MS.gene00537:CDS | 45.0% |
! | TGGCAGTGTTGTTAGTGAGA+AGG | - | chr1.2:5457259-5457278 | MS.gene00537:intron | 45.0% |
! | TTTAAGGTTCCGACTCTTCC+TGG | + | chr1.2:5453142-5453161 | None:intergenic | 45.0% |
! | TTTAGATGTAGGGGTGTGCA+TGG | - | chr1.2:5454721-5454740 | MS.gene00537:intron | 45.0% |
!! | AAAGGGTGTCGTTACACTTG+AGG | - | chr1.2:5455518-5455537 | MS.gene00537:intron | 45.0% |
!! | AGGGTATTGTAGTTGGTGGT+GGG | - | chr1.2:5456919-5456938 | MS.gene00537:intron | 45.0% |
!! | GAAGAGGGTATTGTAGTTGG+TGG | - | chr1.2:5456915-5456934 | MS.gene00537:intron | 45.0% |
!! | GCTCAAGGTCTTATTGCAGA+AGG | - | chr1.2:5453988-5454007 | MS.gene00537:intron | 45.0% |
!! | GGTGTTACTCTTGGTCCTAA+GGG | - | chr1.2:5453344-5453363 | MS.gene00537:intron | 45.0% |
!! | TGGTGTTACTCTTGGTCCTA+AGG | - | chr1.2:5453343-5453362 | MS.gene00537:intron | 45.0% |
!! | TTTTTAAGGGGTGGAGAGAC+GGG | + | chr1.2:5456306-5456325 | None:intergenic | 45.0% |
!!! | ACCTCTGTTGTTTTGGCTCA+AGG | - | chr1.2:5453973-5453992 | MS.gene00537:intron | 45.0% |
!!! | AAAAATTGATTTTTTTTTAA+TGG | - | chr1.2:5453257-5453276 | MS.gene00537:intron | 5.0% |
!!! | TTAAAATTTTAAAAACAATT+TGG | + | chr1.2:5455068-5455087 | None:intergenic | 5.0% |
!!! | TTGTTTTTAAAATTTTAAAT+TGG | - | chr1.2:5455070-5455089 | MS.gene00537:intron | 5.0% |
AAAGGTGGAGTTGGAGGATC+CGG | - | chr1.2:5453876-5453895 | MS.gene00537:intron | 50.0% | |
AAATGGAAGCGGAGGAAGAG+AGG | + | chr1.2:5453065-5453084 | None:intergenic | 50.0% | |
AACCCTGTGCTTATCACACG+TGG | - | chr1.2:5454143-5454162 | MS.gene00537:CDS | 50.0% | |
AGAGACGGGGAAAGAAAGAG+AGG | + | chr1.2:5456292-5456311 | None:intergenic | 50.0% | |
ATCTTTGGTGAGCACCACCT+TGG | + | chr1.2:5456186-5456205 | None:intergenic | 50.0% | |
ATGTGGCAGCAGTTAGTGCA+GGG | - | chr1.2:5455442-5455461 | MS.gene00537:CDS | 50.0% | |
ATTGCAGCACTTAAGGCTCC+TGG | - | chr1.2:5455911-5455930 | MS.gene00537:intron | 50.0% | |
CCAAGCAACATCTAACCACC+TGG | + | chr1.2:5458046-5458065 | None:intergenic | 50.0% | |
CCAGGTGGTTAGATGTTGCT+TGG | - | chr1.2:5458043-5458062 | MS.gene00537:intron | 50.0% | |
CGCTATCAAGAAACTCCAGG+TGG | - | chr1.2:5453206-5453225 | MS.gene00537:intron | 50.0% | |
CGTTCAAAAGGTGGAGTTGG+AGG | - | chr1.2:5453870-5453889 | MS.gene00537:intron | 50.0% | |
CTCTTGCGTTCTCCAAATCC+AGG | + | chr1.2:5455932-5455951 | None:intergenic | 50.0% | |
CTTTAGGCCGCTGTTGAAGA+GGG | - | chr1.2:5456900-5456919 | MS.gene00537:intron | 50.0% | |
GAAATGCAACTCCTTGGCCA+TGG | + | chr1.2:5453172-5453191 | None:intergenic | 50.0% | |
GAACCTTAAAGTCTCCGCCA+TGG | - | chr1.2:5453152-5453171 | MS.gene00537:intron | 50.0% | |
GAGACGGGGAAAGAAAGAGA+GGG | + | chr1.2:5456291-5456310 | None:intergenic | 50.0% | |
GAGGGGTTGTGAAATGGGTA+CGG | - | chr1.2:5455014-5455033 | MS.gene00537:intron | 50.0% | |
GCACTTAAGGCTCCTGGATT+TGG | - | chr1.2:5455917-5455936 | MS.gene00537:intron | 50.0% | |
GCAGAAGAGGGGTTGTGAAA+TGG | - | chr1.2:5455008-5455027 | MS.gene00537:intron | 50.0% | |
GCAGGGAACAATCATGAGGT+AGG | - | chr1.2:5455459-5455478 | MS.gene00537:intron | 50.0% | |
GCATCCTAATCTTGTCCAGG+TGG | - | chr1.2:5458028-5458047 | MS.gene00537:intron | 50.0% | |
GCTCAGACTTGCATCAAAGG+TGG | - | chr1.2:5456950-5456969 | MS.gene00537:intron | 50.0% | |
GGCAACCCTATGGACAATTC+AGG | - | chr1.2:5458149-5458168 | MS.gene00537:CDS | 50.0% | |
GGCCGCCAAGACAAATGATT+TGG | - | chr1.2:5453933-5453952 | MS.gene00537:intron | 50.0% | |
GGCCTTAGCTTAGACAAAGC+TGG | - | chr1.2:5456137-5456156 | MS.gene00537:CDS | 50.0% | |
TCGTTACACTTGAGGAGGGA+AGG | - | chr1.2:5455526-5455545 | MS.gene00537:intron | 50.0% | |
TTGTCCATAGGGTTGCCAAC+AGG | + | chr1.2:5458146-5458165 | None:intergenic | 50.0% | |
! | GAGGGCATGCAATTTGATCG+AGG | - | chr1.2:5455576-5455595 | MS.gene00537:intron | 50.0% |
! | TGCAAAACTGTCTGGTGGTG+TGG | - | chr1.2:5456610-5456629 | MS.gene00537:intron | 50.0% |
! | TGGTGGTGTGGCTGTAATTC+AGG | - | chr1.2:5456622-5456641 | MS.gene00537:intron | 50.0% |
!! | GAATGAGGTTCTAGGCACTG+CGG | - | chr1.2:5456160-5456179 | MS.gene00537:intron | 50.0% |
!! | GAGGGTATTGTAGTTGGTGG+TGG | - | chr1.2:5456918-5456937 | MS.gene00537:intron | 50.0% |
!! | GATAGCTGAGGCGTTGAGTA+AGG | - | chr1.2:5455488-5455507 | MS.gene00537:intron | 50.0% |
!! | GGTGTCGTTACACTTGAGGA+GGG | - | chr1.2:5455522-5455541 | MS.gene00537:intron | 50.0% |
!! | TGGTGTCACTGTTGCCAAAG+AGG | - | chr1.2:5453418-5453437 | MS.gene00537:CDS | 50.0% |
!! | TTTTAAGGGGTGGAGAGACG+GGG | + | chr1.2:5456305-5456324 | None:intergenic | 50.0% |
ACTCTTCCTGGAGAGAGCGA+CGG | + | chr1.2:5453130-5453149 | None:intergenic | 55.0% | |
ATGCAACTCCTTGGCCATGG+CGG | + | chr1.2:5453169-5453188 | None:intergenic | 55.0% | |
CCTCTTCAACAGCGGCCTAA+AGG | + | chr1.2:5456902-5456921 | None:intergenic | 55.0% | |
CCTTTAGGCCGCTGTTGAAG+AGG | - | chr1.2:5456899-5456918 | MS.gene00537:intron | 55.0% | |
GATGTGGCAGCAGTTAGTGC+AGG | - | chr1.2:5455441-5455460 | MS.gene00537:CDS | 55.0% | |
GGAGGAAGAGAGGTTGCATG+AGG | + | chr1.2:5453055-5453074 | None:intergenic | 55.0% | |
TAAAGTCTCCGCCATGGCCA+AGG | - | chr1.2:5453158-5453177 | MS.gene00537:intron | 55.0% | |
TCGCTCTCTCCAGGAAGAGT+CGG | - | chr1.2:5453130-5453149 | MS.gene00537:intron | 55.0% | |
TGCACCTGTTGGCAACCCTA+TGG | - | chr1.2:5458139-5458158 | MS.gene00537:intron | 55.0% | |
TTTGTGGTACCAGAAGCCCG+TGG | + | chr1.2:5454275-5454294 | None:intergenic | 55.0% | |
! | TGGCCATGGCGGAGACTTTA+AGG | + | chr1.2:5453158-5453177 | None:intergenic | 55.0% |
!! | GCTGAGGCGTTGAGTAAGGT+TGG | - | chr1.2:5455492-5455511 | MS.gene00537:intron | 55.0% |
!! | GGGTGTCGTTACACTTGAGG+AGG | - | chr1.2:5455521-5455540 | MS.gene00537:intron | 55.0% |
GAACCTGAGGCTGCACCTGT+TGG | - | chr1.2:5458128-5458147 | MS.gene00537:intron | 60.0% | |
GCAACGACGCATGTCGGACA+TGG | + | chr1.2:5454444-5454463 | None:intergenic | 60.0% | |
GTCCGACATGCGTCGTTGCA+CGG | - | chr1.2:5454445-5454464 | MS.gene00537:intron | 60.0% | |
TGCCGTGCAACGACGCATGT+CGG | + | chr1.2:5454450-5454469 | None:intergenic | 60.0% | |
TTGCCAACAGGTGCAGCCTC+AGG | + | chr1.2:5458134-5458153 | None:intergenic | 60.0% | |
CCAGTACCGTCGCTCTCTCC+AGG | - | chr1.2:5453121-5453140 | MS.gene00537:intron | 65.0% | |
CCTGGAGAGAGCGACGGTAC+TGG | + | chr1.2:5453124-5453143 | None:intergenic | 65.0% | |
! | TCTAGGCACTGCGGCCAAGG+TGG | - | chr1.2:5456169-5456188 | MS.gene00537:intron | 65.0% |
!! | GGTTCTAGGCACTGCGGCCA+AGG | - | chr1.2:5456166-5456185 | MS.gene00537:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 5453033 | 5458548 | 5453033 | ID=MS.gene00537 |
chr1.2 | mRNA | 5453033 | 5458548 | 5453033 | ID=MS.gene00537.t1;Parent=MS.gene00537 |
chr1.2 | exon | 5458357 | 5458548 | 5458357 | ID=MS.gene00537.t1.exon1;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5458357 | 5458548 | 5458357 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5458142 | 5458267 | 5458142 | ID=MS.gene00537.t1.exon2;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5458142 | 5458267 | 5458142 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5457564 | 5457701 | 5457564 | ID=MS.gene00537.t1.exon3;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5457564 | 5457701 | 5457564 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5457361 | 5457456 | 5457361 | ID=MS.gene00537.t1.exon4;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5457361 | 5457456 | 5457361 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5455919 | 5456161 | 5455919 | ID=MS.gene00537.t1.exon5;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5455919 | 5456161 | 5455919 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5455595 | 5455829 | 5455595 | ID=MS.gene00537.t1.exon6;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5455595 | 5455829 | 5455595 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5455298 | 5455467 | 5455298 | ID=MS.gene00537.t1.exon7;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5455298 | 5455467 | 5455298 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5454938 | 5455015 | 5454938 | ID=MS.gene00537.t1.exon8;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5454938 | 5455015 | 5454938 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5454754 | 5454825 | 5454754 | ID=MS.gene00537.t1.exon9;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5454754 | 5454825 | 5454754 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5454571 | 5454675 | 5454571 | ID=MS.gene00537.t1.exon10;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5454571 | 5454675 | 5454571 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5454301 | 5454393 | 5454301 | ID=MS.gene00537.t1.exon11;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5454301 | 5454393 | 5454301 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5454134 | 5454226 | 5454134 | ID=MS.gene00537.t1.exon12;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5454134 | 5454226 | 5454134 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5453411 | 5453534 | 5453411 | ID=MS.gene00537.t1.exon13;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5453411 | 5453534 | 5453411 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
chr1.2 | exon | 5453033 | 5453046 | 5453033 | ID=MS.gene00537.t1.exon14;Parent=MS.gene00537.t1 |
chr1.2 | CDS | 5453033 | 5453046 | 5453033 | ID=cds.MS.gene00537.t1;Parent=MS.gene00537.t1 |
Gene Sequence |
Protein sequence |