Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66497.t1 | XP_013465956.1 | 99.2 | 592 | 4 | 1 | 1 | 592 | 1 | 591 | 0.00E+00 | 1078.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66497.t1 | P08927 | 93.0 | 589 | 40 | 1 | 3 | 591 | 6 | 593 | 1.7e-294 | 1012.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66497.t1 | A0A072VDW9 | 99.2 | 592 | 4 | 1 | 1 | 592 | 1 | 591 | 0.0e+00 | 1078.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene66497 | 0.824459 | 7.98E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene66497 | 0.820895 | 5.39E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene66497 | 0.881614 | 2.07E-70 | -1.69E-46 |
| MS.gene050076 | MS.gene66497 | 0.808961 | 2.39E-50 | -1.69E-46 |
| MS.gene050099 | MS.gene66497 | 0.887913 | 9.39E-73 | -1.69E-46 |
| MS.gene050128 | MS.gene66497 | 0.802784 | 4.76E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene66497 | 0.845897 | 3.05E-59 | -1.69E-46 |
| MS.gene050319 | MS.gene66497 | -0.80691 | 6.54E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene66497 | 0.832694 | 8.17E-56 | -1.69E-46 |
| MS.gene051471 | MS.gene66497 | 0.86233 | 5.47E-64 | -1.69E-46 |
| MS.gene051662 | MS.gene66497 | 0.913946 | 3.41E-84 | -1.69E-46 |
| MS.gene051663 | MS.gene66497 | 0.946196 | 7.31E-105 | -1.69E-46 |
| MS.gene052078 | MS.gene66497 | 0.851093 | 1.11E-60 | -1.69E-46 |
| MS.gene052178 | MS.gene66497 | 0.824739 | 6.85E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene66497 | 0.830291 | 3.19E-55 | -1.69E-46 |
| MS.gene052207 | MS.gene66497 | 0.820041 | 8.46E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene66497 | 0.864433 | 1.22E-64 | -1.69E-46 |
| MS.gene053559 | MS.gene66497 | 0.833808 | 4.31E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene66497 | 0.879209 | 1.50E-69 | -1.69E-46 |
| MS.gene053907 | MS.gene66497 | 0.807383 | 5.19E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene66497 | 0.83646 | 9.24E-57 | -1.69E-46 |
| MS.gene05455 | MS.gene66497 | 0.818583 | 1.82E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene66497 | 0.811988 | 5.31E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene66497 | 0.823828 | 1.12E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene66497 | 0.866845 | 2.12E-65 | -1.69E-46 |
| MS.gene055390 | MS.gene66497 | 0.868494 | 6.26E-66 | -1.69E-46 |
| MS.gene055422 | MS.gene66497 | 0.881666 | 1.98E-70 | -1.69E-46 |
| MS.gene055428 | MS.gene66497 | 0.852662 | 3.99E-61 | -1.69E-46 |
| MS.gene055604 | MS.gene66497 | 0.804735 | 1.87E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene66497 | 0.812704 | 3.71E-51 | -1.69E-46 |
| MS.gene055896 | MS.gene66497 | 0.814906 | 1.21E-51 | -1.69E-46 |
| MS.gene056069 | MS.gene66497 | -0.812385 | 4.35E-51 | -1.69E-46 |
| MS.gene056314 | MS.gene66497 | 0.802495 | 5.46E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene66497 | 0.806826 | 6.81E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene66497 | 0.840291 | 9.50E-58 | -1.69E-46 |
| MS.gene05702 | MS.gene66497 | 0.802627 | 5.13E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene66497 | 0.831993 | 1.22E-55 | -1.69E-46 |
| MS.gene057245 | MS.gene66497 | 0.80337 | 3.60E-49 | -1.69E-46 |
| MS.gene057260 | MS.gene66497 | 0.804667 | 1.94E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene66497 | 0.89173 | 3.04E-74 | -1.69E-46 |
| MS.gene058002 | MS.gene66497 | 0.848152 | 7.35E-60 | -1.69E-46 |
| MS.gene058082 | MS.gene66497 | 0.800765 | 1.24E-48 | -1.69E-46 |
| MS.gene05811 | MS.gene66497 | 0.85891 | 5.95E-63 | -1.69E-46 |
| MS.gene058293 | MS.gene66497 | 0.80916 | 2.17E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene66497 | 0.851509 | 8.48E-61 | -1.69E-46 |
| MS.gene058749 | MS.gene66497 | 0.846009 | 2.84E-59 | -1.69E-46 |
| MS.gene058845 | MS.gene66497 | 0.842611 | 2.33E-58 | -1.69E-46 |
| MS.gene05907 | MS.gene66497 | 0.836973 | 6.84E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene66497 | 0.80734 | 5.30E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene66497 | 0.852438 | 4.62E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene66497 | 0.840962 | 6.34E-58 | -1.69E-46 |
| MS.gene05959 | MS.gene66497 | 0.805503 | 1.29E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene66497 | 0.807073 | 6.04E-50 | -1.69E-46 |
| MS.gene059708 | MS.gene66497 | 0.814583 | 1.43E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene66497 | 0.816352 | 5.78E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene66497 | 0.834553 | 2.80E-56 | -1.69E-46 |
| MS.gene060005 | MS.gene66497 | 0.804171 | 2.46E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene66497 | 0.833762 | 4.43E-56 | -1.69E-46 |
| MS.gene060476 | MS.gene66497 | 0.836006 | 1.20E-56 | -1.69E-46 |
| MS.gene06090 | MS.gene66497 | 0.8126 | 3.91E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene66497 | 0.838526 | 2.73E-57 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66497.t1 | MTR_1g017390 | 99.155 | 592 | 4 | 1 | 1 | 592 | 1 | 591 | 0.0 | 1163 |
| MS.gene66497.t1 | MTR_1g017380 | 98.649 | 592 | 7 | 1 | 1 | 592 | 1 | 591 | 0.0 | 1157 |
| MS.gene66497.t1 | MTR_4g057970 | 51.024 | 586 | 281 | 5 | 1 | 584 | 1 | 582 | 0.0 | 545 |
| MS.gene66497.t1 | MTR_4g084130 | 47.681 | 539 | 276 | 5 | 41 | 577 | 34 | 568 | 5.36e-170 | 495 |
| MS.gene66497.t1 | MTR_1g090140 | 45.548 | 584 | 298 | 6 | 8 | 586 | 5 | 573 | 4.16e-168 | 490 |
| MS.gene66497.t1 | MTR_1g090130 | 46.679 | 527 | 276 | 3 | 48 | 573 | 34 | 556 | 9.46e-163 | 477 |
| MS.gene66497.t1 | MTR_8g017080 | 43.376 | 551 | 302 | 5 | 42 | 586 | 29 | 575 | 5.09e-150 | 444 |
| MS.gene66497.t1 | MTR_4g084130 | 47.912 | 455 | 234 | 3 | 125 | 577 | 3 | 456 | 7.20e-144 | 425 |
| MS.gene66497.t1 | MTR_0991s0010 | 97.312 | 186 | 4 | 1 | 1 | 186 | 1 | 185 | 1.64e-118 | 349 |
| MS.gene66497.t1 | MTR_5g087560 | 23.427 | 572 | 328 | 22 | 65 | 591 | 30 | 536 | 2.24e-11 | 67.0 |
| MS.gene66497.t1 | MTR_7g067470 | 36.434 | 129 | 74 | 3 | 66 | 192 | 26 | 148 | 6.74e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66497.t1 | AT1G55490 | 89.576 | 566 | 56 | 2 | 26 | 591 | 37 | 599 | 0.0 | 1009 |
| MS.gene66497.t1 | AT1G55490 | 89.576 | 566 | 56 | 2 | 26 | 591 | 37 | 599 | 0.0 | 1009 |
| MS.gene66497.t1 | AT1G55490 | 89.576 | 566 | 56 | 2 | 26 | 591 | 37 | 599 | 0.0 | 1009 |
| MS.gene66497.t1 | AT1G55490 | 89.576 | 566 | 56 | 2 | 26 | 591 | 37 | 599 | 0.0 | 1009 |
| MS.gene66497.t1 | AT1G55490 | 89.576 | 566 | 56 | 2 | 26 | 591 | 37 | 599 | 0.0 | 1009 |
| MS.gene66497.t1 | AT3G13470 | 90.270 | 555 | 53 | 1 | 37 | 591 | 42 | 595 | 0.0 | 1002 |
| MS.gene66497.t1 | AT5G56500 | 88.475 | 564 | 62 | 3 | 30 | 592 | 36 | 597 | 0.0 | 993 |
| MS.gene66497.t1 | AT5G56500 | 88.475 | 564 | 62 | 3 | 30 | 592 | 36 | 597 | 0.0 | 993 |
| MS.gene66497.t1 | AT1G26230 | 66.841 | 573 | 189 | 1 | 13 | 584 | 4 | 576 | 0.0 | 788 |
| MS.gene66497.t1 | AT1G26230 | 68.786 | 519 | 162 | 0 | 66 | 584 | 6 | 524 | 0.0 | 749 |
| MS.gene66497.t1 | AT1G26230 | 69.126 | 515 | 159 | 0 | 70 | 584 | 2 | 516 | 0.0 | 746 |
| MS.gene66497.t1 | AT1G26230 | 65.422 | 509 | 175 | 1 | 13 | 520 | 4 | 512 | 0.0 | 679 |
| MS.gene66497.t1 | AT1G26230 | 64.920 | 439 | 153 | 1 | 13 | 450 | 4 | 442 | 0.0 | 582 |
| MS.gene66497.t1 | AT2G28000 | 51.397 | 537 | 256 | 4 | 37 | 572 | 37 | 569 | 0.0 | 529 |
| MS.gene66497.t1 | AT3G23990 | 45.629 | 572 | 294 | 5 | 8 | 578 | 5 | 560 | 2.91e-167 | 488 |
| MS.gene66497.t1 | AT2G33210 | 46.073 | 573 | 289 | 7 | 10 | 579 | 7 | 562 | 4.31e-167 | 488 |
| MS.gene66497.t1 | AT2G33210 | 45.899 | 573 | 285 | 8 | 10 | 579 | 7 | 557 | 2.70e-163 | 478 |
| MS.gene66497.t1 | AT3G13860 | 46.168 | 548 | 284 | 6 | 48 | 592 | 33 | 572 | 1.28e-156 | 461 |
| MS.gene66497.t1 | AT5G18820 | 47.681 | 539 | 275 | 6 | 44 | 579 | 31 | 565 | 9.68e-156 | 459 |
| MS.gene66497.t1 | AT5G18820 | 46.943 | 458 | 239 | 4 | 125 | 579 | 3 | 459 | 1.19e-127 | 383 |
| MS.gene66497.t1 | AT5G18820 | 45.714 | 385 | 205 | 3 | 44 | 427 | 31 | 412 | 6.84e-103 | 318 |
| MS.gene66497.t1 | AT3G11830 | 23.285 | 554 | 309 | 21 | 65 | 566 | 30 | 519 | 9.06e-12 | 68.2 |
| MS.gene66497.t1 | AT3G11830 | 23.201 | 556 | 309 | 21 | 65 | 566 | 30 | 521 | 2.19e-11 | 67.0 |
Find 151 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTGCAATTATCAAAAT+AGG | 0.166829 | 1.4:+5376979 | None:intergenic |
| TGGCCATGGCGGAGACTTTA+AGG | 0.205297 | 1.4:+5379652 | None:intergenic |
| AACTACTACCTCTGTTGTTT+TGG | 0.233024 | 1.4:-5378841 | MS.gene66497:CDS |
| TGAGAATATTGGTGCTAAAT+TGG | 0.233906 | 1.4:-5378907 | MS.gene66497:CDS |
| CTCGCTTTGTAACTGCTTCT+TGG | 0.266078 | 1.4:+5376574 | None:intergenic |
| GCACTTAAGGCTCCTGGATT+TGG | 0.266390 | 1.4:-5376892 | MS.gene66497:CDS |
| AACTATTGTGGTTGTATCTT+TGG | 0.272759 | 1.4:+5376611 | None:intergenic |
| AATCTATAAATCACCTTTGT+AGG | 0.273262 | 1.4:+5375370 | None:intergenic |
| AAGAGAGGGAAACCTCTATT+TGG | 0.307722 | 1.4:+5376535 | None:intergenic |
| TTTAAGGTTCCGACTCTTCC+TGG | 0.311790 | 1.4:+5379668 | None:intergenic |
| TGGTGGTGTGGCTGTAATTC+AGG | 0.336881 | 1.4:-5376187 | MS.gene66497:intron |
| ACACCATCATTAACAATCTT+AGG | 0.351092 | 1.4:+5379406 | None:intergenic |
| TCGCTTTGTAACTGCTTCTT+GGG | 0.358585 | 1.4:+5376575 | None:intergenic |
| GGCCGCCAAGACAAATGATT+TGG | 0.362795 | 1.4:-5378874 | MS.gene66497:CDS |
| TGTGAACAAGCTTGCAGATT+TGG | 0.366191 | 1.4:-5379488 | MS.gene66497:CDS |
| CAATAAGAAACACACCTCTT+TGG | 0.381950 | 1.4:+5379375 | None:intergenic |
| CCTCTGCAATTATCAAAATA+GGG | 0.385162 | 1.4:+5376980 | None:intergenic |
| CTGTGTTGTTGTTGAGATAA+AGG | 0.387501 | 1.4:-5374703 | MS.gene66497:CDS |
| GTTGTTCTTGAGAGCAAGTA+TGG | 0.388399 | 1.4:-5379433 | MS.gene66497:CDS |
| TGGTGTTACTCTTGGTCCTA+AGG | 0.393067 | 1.4:-5379464 | MS.gene66497:CDS |
| GAGGGTATTGTAGTTGGTGG+TGG | 0.394415 | 1.4:-5375891 | MS.gene66497:CDS |
| ACTGAAGATTGCAGCACTTA+AGG | 0.394593 | 1.4:-5376905 | MS.gene66497:CDS |
| CTTGTTGTGAACAAACTTAG+AGG | 0.403832 | 1.4:-5376931 | MS.gene66497:CDS |
| GGCAACCCTATGGACAATTC+AGG | 0.408645 | 1.4:-5374660 | MS.gene66497:intron |
| TCCAACGACGATACGAGATA+TGG | 0.410275 | 1.4:-5375448 | MS.gene66497:CDS |
| ACAAATTAAGAACCAAATAG+AGG | 0.412098 | 1.4:-5376547 | MS.gene66497:intron |
| GGATATTGAACAAGAAGCTT+TGG | 0.413311 | 1.4:-5376959 | MS.gene66497:CDS |
| AAAGCTGGGAATGAGGTTCT+AGG | 0.414128 | 1.4:-5376657 | MS.gene66497:CDS |
| GAGGATCCGGTTGAGAATAT+TGG | 0.429757 | 1.4:-5378918 | MS.gene66497:CDS |
| GATGATATTGCCATCTTGAC+AGG | 0.432753 | 1.4:-5376847 | MS.gene66497:CDS |
| GGCCTTAGCTTAGACAAAGC+TGG | 0.436997 | 1.4:-5376672 | MS.gene66497:CDS |
| GTTGAGTAAGGTTGGTAGAA+AGG | 0.446649 | 1.4:-5377309 | MS.gene66497:CDS |
| TTGCGTTCAAAAGGTGGAGT+TGG | 0.448665 | 1.4:-5378940 | MS.gene66497:intron |
| GATTTGGTTGGTGTTACTCT+TGG | 0.449977 | 1.4:-5379472 | MS.gene66497:CDS |
| CTCACTGTCTGTAACAAAGT+AGG | 0.452915 | 1.4:+5377199 | None:intergenic |
| ATTGCAGCACTTAAGGCTCC+TGG | 0.453971 | 1.4:-5376898 | MS.gene66497:CDS |
| CGTTCAAAAGGTGGAGTTGG+AGG | 0.454662 | 1.4:-5378937 | MS.gene66497:intron |
| CCAGGTGGTTAGATGTTGCT+TGG | 0.456438 | 1.4:-5374766 | MS.gene66497:intron |
| GCCTGCCAAATCATTTGTCT+TGG | 0.460705 | 1.4:+5378869 | None:intergenic |
| TCTTATTGCAGAAGGTGTTA+AGG | 0.461521 | 1.4:-5378811 | MS.gene66497:intron |
| TGGTGCTAAATTGGTTAGAC+AGG | 0.463771 | 1.4:-5378898 | MS.gene66497:CDS |
| AAATGGAAGCGGAGGAAGAG+AGG | 0.465288 | 1.4:+5379745 | None:intergenic |
| AGAAGATGGGAATGAAGAAA+TGG | 0.465700 | 1.4:+5379728 | None:intergenic |
| TTGCCAACAGGTGCAGCCTC+AGG | 0.467059 | 1.4:+5374678 | None:intergenic |
| AAAGGTGGAGTTGGAGGATC+CGG | 0.467134 | 1.4:-5378931 | MS.gene66497:intron |
| TGCCAAATCATTTGTCTTGG+CGG | 0.470595 | 1.4:+5378872 | None:intergenic |
| GAGTTGCATTTCAACAAAGA+TGG | 0.471240 | 1.4:-5379627 | MS.gene66497:CDS |
| TTAGCACCAATATTCTCAAC+CGG | 0.473308 | 1.4:+5378912 | None:intergenic |
| AGGGTATTGTAGTTGGTGGT+GGG | 0.474079 | 1.4:-5375890 | MS.gene66497:CDS |
| GCCTTAGCTTAGACAAAGCT+GGG | 0.479147 | 1.4:-5376671 | MS.gene66497:CDS |
| TATGAAGATTTGATGTCTGC+TGG | 0.479231 | 1.4:-5375403 | MS.gene66497:CDS |
| TTTGTTGAAATGCAACTCCT+TGG | 0.479417 | 1.4:+5379632 | None:intergenic |
| GATAGCTGAGGCGTTGAGTA+AGG | 0.484566 | 1.4:-5377321 | MS.gene66497:CDS |
| AAAAGGAGAAGTTGAATGAA+AGG | 0.489096 | 1.4:-5376224 | MS.gene66497:CDS |
| AAAGATACAACCACAATAGT+TGG | 0.489610 | 1.4:-5376609 | MS.gene66497:CDS |
| GAAAGGATTGCAAAACTGTC+TGG | 0.490781 | 1.4:-5376207 | MS.gene66497:CDS |
| GCAGGTTGAGGATAGTGAAT+TGG | 0.491700 | 1.4:-5377393 | MS.gene66497:intron |
| TGCAAAACTGTCTGGTGGTG+TGG | 0.492146 | 1.4:-5376199 | MS.gene66497:CDS |
| GTTAATAAGATCCCTTGCAT+TGG | 0.496312 | 1.4:+5377032 | None:intergenic |
| TTAATTTCAGAGGGTAGCTA+AGG | 0.496676 | 1.4:+5375595 | None:intergenic |
| TGGCAATATCATCAAGGTAC+TGG | 0.496736 | 1.4:+5376857 | None:intergenic |
| CTCTTGCGTTCTCCAAATCC+AGG | 0.496984 | 1.4:+5376880 | None:intergenic |
| CCTGGAGAGAGCGACGGTAC+TGG | 0.505757 | 1.4:+5379686 | None:intergenic |
| GGTGTTACTCTTGGTCCTAA+GGG | 0.507915 | 1.4:-5379463 | MS.gene66497:CDS |
| CCAGTACCGTCGCTCTCTCC+AGG | 0.507934 | 1.4:-5379686 | MS.gene66497:CDS |
| TTTGCTCAGACTTGCATCAA+AGG | 0.510939 | 1.4:-5375862 | MS.gene66497:CDS |
| TGCAGAACAAGATTATGAAA+AGG | 0.511288 | 1.4:-5376241 | MS.gene66497:CDS |
| GCCAAGACAAATGATTTGGC+AGG | 0.513756 | 1.4:-5378870 | MS.gene66497:CDS |
| TTGTCCATAGGGTTGCCAAC+AGG | 0.519465 | 1.4:+5374666 | None:intergenic |
| TTGAGTAAGGTTGGTAGAAA+GGG | 0.519613 | 1.4:-5377308 | MS.gene66497:CDS |
| ACAAATGATTTGGCAGGCGA+TGG | 0.521838 | 1.4:-5378864 | MS.gene66497:CDS |
| TCCATATCTCGTATCGTCGT+TGG | 0.522924 | 1.4:+5375447 | None:intergenic |
| TCTCCTAAGATTGTTAATGA+TGG | 0.522934 | 1.4:-5379409 | MS.gene66497:CDS |
| CTTAGACAAAGCTGGGAATG+AGG | 0.523660 | 1.4:-5376664 | MS.gene66497:CDS |
| TCACTGTCTGTAACAAAGTA+GGG | 0.525001 | 1.4:+5377200 | None:intergenic |
| GGTTCTAGGCACTGCGGCCA+AGG | 0.525331 | 1.4:-5376643 | MS.gene66497:CDS |
| TCCCAGCTTTGTCTAAGCTA+AGG | 0.526799 | 1.4:+5376670 | None:intergenic |
| CCTTTAGGCCGCTGTTGAAG+AGG | 0.527246 | 1.4:-5375910 | MS.gene66497:intron |
| TTCTGCGAGTGGAAGAAGAT+GGG | 0.529678 | 1.4:+5379715 | None:intergenic |
| TTTCTGCGAGTGGAAGAAGA+TGG | 0.532066 | 1.4:+5379714 | None:intergenic |
| TAAAGTCTCCGCCATGGCCA+AGG | 0.533355 | 1.4:-5379649 | MS.gene66497:CDS |
| ATCTTTGGTGAGCACCACCT+TGG | 0.533468 | 1.4:+5376626 | None:intergenic |
| AGAACAACATTCCTTCCCTT+AGG | 0.535555 | 1.4:+5379448 | None:intergenic |
| ATACCACGTGTGATAAGCAC+AGG | 0.537355 | 1.4:+5378661 | None:intergenic |
| GTTGAAGAGGGTATTGTAGT+TGG | 0.538398 | 1.4:-5375897 | MS.gene66497:CDS |
| TGGGAATGAAGAAATGGAAG+CGG | 0.541881 | 1.4:+5379734 | None:intergenic |
| GATGTGGCAGCAGTTAGTGC+AGG | 0.549028 | 1.4:-5377368 | MS.gene66497:CDS |
| TGCACCTGTTGGCAACCCTA+TGG | 0.550758 | 1.4:-5374670 | MS.gene66497:CDS |
| TTATAAACCTCCTGTCAAGA+TGG | 0.550939 | 1.4:+5376837 | None:intergenic |
| CTTTAGGCCGCTGTTGAAGA+GGG | 0.553599 | 1.4:-5375909 | MS.gene66497:intron |
| GCTCAAGGTCTTATTGCAGA+AGG | 0.554354 | 1.4:-5378819 | MS.gene66497:CDS |
| ACTTCCATCACCAACTATTG+TGG | 0.557957 | 1.4:+5376599 | None:intergenic |
| CTAGAGGACGCAATTAGAAA+CGG | 0.558599 | 1.4:-5377006 | MS.gene66497:CDS |
| GAACCTGAGGCTGCACCTGT+TGG | 0.558717 | 1.4:-5374681 | MS.gene66497:CDS |
| AACAAGCTTGCAGATTTGGT+TGG | 0.565866 | 1.4:-5379484 | MS.gene66497:CDS |
| AAACAATCTGTATGTTGTTG+AGG | 0.570389 | 1.4:-5377252 | MS.gene66497:CDS |
| AACAATCTGTATGTTGTTGA+GGG | 0.571719 | 1.4:-5377251 | MS.gene66497:CDS |
| AAAGGGTGTCGTTACACTTG+AGG | 0.572247 | 1.4:-5377291 | MS.gene66497:CDS |
| GAAGAGGGTATTGTAGTTGG+TGG | 0.573873 | 1.4:-5375894 | MS.gene66497:CDS |
| TATGGATATAATGCTGCCAC+TGG | 0.574388 | 1.4:-5375430 | MS.gene66497:CDS |
| ACTTAAACTAATGTCAAAAG+AGG | 0.575994 | 1.4:-5378608 | MS.gene66497:intron |
| TTCCGCTATCAAGAAACTCC+AGG | 0.579355 | 1.4:-5379604 | MS.gene66497:intron |
| GCTGAGGCGTTGAGTAAGGT+TGG | 0.581310 | 1.4:-5377317 | MS.gene66497:CDS |
| ACATACCTGAATTGTCCATA+GGG | 0.583522 | 1.4:+5374655 | None:intergenic |
| TGGCAGTGTTGTTAGTGAGA+AGG | 0.588442 | 1.4:-5375550 | MS.gene66497:intron |
| TCTAGGCACTGCGGCCAAGG+TGG | 0.592690 | 1.4:-5376640 | MS.gene66497:CDS |
| TGCTAAATTGGTTAGACAGG+CGG | 0.595682 | 1.4:-5378895 | MS.gene66497:CDS |
| TTACTCTTGGTCCTAAGGGA+AGG | 0.596314 | 1.4:-5379459 | MS.gene66497:CDS |
| TACATACCTGAATTGTCCAT+AGG | 0.599446 | 1.4:+5374654 | None:intergenic |
| ACAACCACAATAGTTGGTGA+TGG | 0.599514 | 1.4:-5376603 | MS.gene66497:CDS |
| GGGTGTCGTTACACTTGAGG+AGG | 0.602205 | 1.4:-5377288 | MS.gene66497:CDS |
| GCAGGGAACAATCATGAGGT+AGG | 0.602361 | 1.4:-5377350 | MS.gene66497:CDS |
| CACCTGGAGTTTCTTGATAG+CGG | 0.605493 | 1.4:+5379602 | None:intergenic |
| ATGAAGATTTGATGTCTGCT+GGG | 0.605666 | 1.4:-5375402 | MS.gene66497:CDS |
| TCAAGATGGCAATATCATCA+AGG | 0.606055 | 1.4:+5376851 | None:intergenic |
| GCTCAGACTTGCATCAAAGG+TGG | 0.608186 | 1.4:-5375859 | MS.gene66497:CDS |
| TCGCTCTCTCCAGGAAGAGT+CGG | 0.608851 | 1.4:-5379677 | MS.gene66497:CDS |
| GATATTGCCATCTTGACAGG+AGG | 0.609386 | 1.4:-5376844 | MS.gene66497:intron |
| TAATTTCAGAGGGTAGCTAA+GGG | 0.611417 | 1.4:+5375596 | None:intergenic |
| TACAATACCCTCTTCAACAG+CGG | 0.611736 | 1.4:+5375902 | None:intergenic |
| TCGTTACACTTGAGGAGGGA+AGG | 0.613492 | 1.4:-5377283 | MS.gene66497:CDS |
| CTTGCAGTTCTCAAATTCAA+CGG | 0.614107 | 1.4:+5377169 | None:intergenic |
| GGATAAATTTAATGATGCCA+TGG | 0.615836 | 1.4:+5379776 | None:intergenic |
| ACAAACTGAGACAGAACTCA+AGG | 0.620054 | 1.4:-5376045 | MS.gene66497:CDS |
| GAATGAAGAAATGGAAGCGG+AGG | 0.624472 | 1.4:+5379737 | None:intergenic |
| AGGTACTGTTATCAGAGAGG+AGG | 0.632407 | 1.4:-5376697 | MS.gene66497:CDS |
| GAAATGCAACTCCTTGGCCA+TGG | 0.632735 | 1.4:+5379638 | None:intergenic |
| CAAATCTTCATATTTGCCAG+TGG | 0.633124 | 1.4:+5375414 | None:intergenic |
| GGATAGTGAATTGGCTGATG+TGG | 0.636323 | 1.4:-5377384 | MS.gene66497:CDS |
| TGGTGTCACTGTTGCCAAAG+AGG | 0.646809 | 1.4:-5379389 | MS.gene66497:intron |
| AACCCTGTGCTTATCACACG+TGG | 0.648183 | 1.4:-5378664 | MS.gene66497:CDS |
| ACTGTTATCAGAGAGGAGGT+TGG | 0.652322 | 1.4:-5376693 | MS.gene66497:CDS |
| ATGCAACTCCTTGGCCATGG+CGG | 0.653898 | 1.4:+5379641 | None:intergenic |
| GAACCTTAAAGTCTCCGCCA+TGG | 0.655961 | 1.4:-5379655 | MS.gene66497:CDS |
| GAGGGCATGCAATTTGATCG+AGG | 0.658220 | 1.4:-5377233 | MS.gene66497:CDS |
| ATGTGGCAGCAGTTAGTGCA+GGG | 0.658714 | 1.4:-5377367 | MS.gene66497:CDS |
| GGAGGAAGAGAGGTTGCATG+AGG | 0.660744 | 1.4:+5379755 | None:intergenic |
| AGACGCTCTTAACGCTACAA+AGG | 0.660955 | 1.4:-5376003 | MS.gene66497:intron |
| TGGGATCATTGATCCTACAA+AGG | 0.667555 | 1.4:-5375383 | MS.gene66497:intron |
| GGATCTTATTAACATACTAG+AGG | 0.670020 | 1.4:-5377022 | MS.gene66497:CDS |
| GGTGTCGTTACACTTGAGGA+GGG | 0.689354 | 1.4:-5377287 | MS.gene66497:CDS |
| GGTAGGAAATATGATAGCTG+AGG | 0.689740 | 1.4:-5377333 | MS.gene66497:CDS |
| ACTCTTCCTGGAGAGAGCGA+CGG | 0.692153 | 1.4:+5379680 | None:intergenic |
| CGTTGAATTTGAGAACTGCA+AGG | 0.697779 | 1.4:-5377168 | MS.gene66497:intron |
| TAGTGCAGGGAACAATCATG+AGG | 0.700989 | 1.4:-5377354 | MS.gene66497:CDS |
| TATAGGTACTGTTATCAGAG+AGG | 0.702894 | 1.4:-5376700 | MS.gene66497:intron |
| TGTTGAGATAAAGGAACCTG+AGG | 0.713419 | 1.4:-5374694 | MS.gene66497:CDS |
| AGGATTGCAAAACTGTCTGG+TGG | 0.719435 | 1.4:-5376204 | MS.gene66497:CDS |
| ACCTTGAGCCAAAACAACAG+AGG | 0.725524 | 1.4:+5378833 | None:intergenic |
| TACCACGTGTGATAAGCACA+GGG | 0.740125 | 1.4:+5378662 | None:intergenic |
| GAATGAGGTTCTAGGCACTG+CGG | 0.821029 | 1.4:-5376649 | MS.gene66497:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATGATATTATATACT+AGG | - | chr1.4:5379704-5379723 | MS.gene66497:CDS | 10.0% |
| !! | CATAAAAAAAGAAAAAAAAA+AGG | + | chr1.4:5376131-5376150 | None:intergenic | 10.0% |
| !!! | AAAGAAAAAATAAATCTTTT+TGG | + | chr1.4:5375758-5375777 | None:intergenic | 10.0% |
| !!! | AGTTTTTTTTATTTTTCATA+TGG | - | chr1.4:5378288-5378307 | MS.gene66497:intron | 10.0% |
| !!! | TTAAAAAATGAGAAATATTT+TGG | - | chr1.4:5377635-5377654 | MS.gene66497:intron | 10.0% |
| !! | ACTATTAATGTAAAAAACAT+AGG | + | chr1.4:5376548-5376567 | None:intergenic | 15.0% |
| !! | GATAAATTAATGAACATTAT+GGG | + | chr1.4:5378093-5378112 | None:intergenic | 15.0% |
| !!! | AATAAATGATGGTATTTTTT+TGG | + | chr1.4:5379625-5379644 | None:intergenic | 15.0% |
| !!! | ATTATATCACTTTATCTTTT+TGG | - | chr1.4:5375876-5375895 | MS.gene66497:CDS | 15.0% |
| !!! | CTTATCAAATTATTTTGTAA+TGG | - | chr1.4:5375935-5375954 | MS.gene66497:intron | 15.0% |
| !!! | GTTTTTGTAAATAAATAGTT+AGG | - | chr1.4:5376352-5376371 | MS.gene66497:intron | 15.0% |
| !!! | GTTTTTTTAGATTGATTAAT+TGG | - | chr1.4:5376374-5376393 | MS.gene66497:intron | 15.0% |
| !!! | TCTTTTTTTATGAATTGAAA+TGG | - | chr1.4:5376139-5376158 | MS.gene66497:intron | 15.0% |
| !!! | TGTTAGTTTTGATTAAATTT+TGG | - | chr1.4:5378797-5378816 | MS.gene66497:intron | 15.0% |
| !!! | TTTACAAAAAAAACAGATTT+TGG | + | chr1.4:5376051-5376070 | None:intergenic | 15.0% |
| !! | AAAATGTCTACATATTATAC+AGG | - | chr1.4:5377792-5377811 | MS.gene66497:intron | 20.0% |
| !! | AAATTAATAGCAAAAAATGC+TGG | - | chr1.4:5378478-5378497 | MS.gene66497:intron | 20.0% |
| !! | AAGTTTAAATGAAAAAGATG+AGG | + | chr1.4:5376620-5376639 | None:intergenic | 20.0% |
| !! | ACTAGAACATAAAATAAATC+AGG | + | chr1.4:5378974-5378993 | None:intergenic | 20.0% |
| !! | ACTAGAGAAAAAAAAAATAC+AGG | + | chr1.4:5378717-5378736 | None:intergenic | 20.0% |
| !! | AGTTTAAATGAAAAAGATGA+GGG | + | chr1.4:5376619-5376638 | None:intergenic | 20.0% |
| !! | ATTTGTAAATTATGAAATGG+AGG | - | chr1.4:5376215-5376234 | MS.gene66497:CDS | 20.0% |
| !! | CAAAATATGCAAAAAAATGT+GGG | + | chr1.4:5375551-5375570 | None:intergenic | 20.0% |
| !! | CAGATTTGTAAATTATGAAA+TGG | - | chr1.4:5376212-5376231 | MS.gene66497:CDS | 20.0% |
| !! | GGATAAATTAATGAACATTA+TGG | + | chr1.4:5378094-5378113 | None:intergenic | 20.0% |
| !! | GTATAAAAATTGGCTAAATT+TGG | - | chr1.4:5378529-5378548 | MS.gene66497:intron | 20.0% |
| !! | TAACTAATAAATGCTTGATT+TGG | - | chr1.4:5375296-5375315 | MS.gene66497:intron | 20.0% |
| !! | TACACAAAAAAACAAGAAAA+CGG | + | chr1.4:5375480-5375499 | None:intergenic | 20.0% |
| !! | TTCAATTGAGTTATTGTATT+TGG | - | chr1.4:5374777-5374796 | MS.gene66497:intron | 20.0% |
| !! | TTCCTTAAAAAAATTGTATG+TGG | - | chr1.4:5378880-5378899 | MS.gene66497:CDS | 20.0% |
| !! | TTTAGTGAATTAGTTATATG+TGG | - | chr1.4:5375068-5375087 | MS.gene66497:intron | 20.0% |
| !!! | ACATTTTTTTGCATATTTTG+GGG | - | chr1.4:5375551-5375570 | MS.gene66497:CDS | 20.0% |
| !!! | ACGATTTTTAAAACAATTCT+TGG | - | chr1.4:5379033-5379052 | MS.gene66497:intron | 20.0% |
| !!! | AGAGTGAAATTTCATTTTAT+AGG | - | chr1.4:5375353-5375372 | MS.gene66497:intron | 20.0% |
| !!! | CACATTTTTTTGCATATTTT+GGG | - | chr1.4:5375550-5375569 | MS.gene66497:intron | 20.0% |
| !!! | CATTATAAATGGTTTGTATA+TGG | - | chr1.4:5378766-5378785 | MS.gene66497:intron | 20.0% |
| !!! | TAAATTAAACTTAGCTTGTA+GGG | - | chr1.4:5378736-5378755 | MS.gene66497:intron | 20.0% |
| !!! | TCATTAATTTATCCTTTTAC+TGG | - | chr1.4:5378100-5378119 | MS.gene66497:intron | 20.0% |
| !!! | TTTACTTGAATTGTTGTTTT+TGG | - | chr1.4:5374915-5374934 | MS.gene66497:intron | 20.0% |
| !!! | TTTTTCTCAATTTAGATGTA+GGG | - | chr1.4:5375961-5375980 | MS.gene66497:intron | 20.0% |
| !!! | TTTTTGCTATTAATTTCAGA+GGG | + | chr1.4:5378474-5378493 | None:intergenic | 20.0% |
| !!! | TTTTTTCTCAATTTAGATGT+AGG | - | chr1.4:5375960-5375979 | MS.gene66497:intron | 20.0% |
| !!! | TTTTTTGCTATTAATTTCAG+AGG | + | chr1.4:5378475-5378494 | None:intergenic | 20.0% |
| ! | AATCTATAAATCACCTTTGT+AGG | + | chr1.4:5378690-5378709 | None:intergenic | 25.0% |
| ! | ACAAACCATTTATAATGATG+CGG | + | chr1.4:5378763-5378782 | None:intergenic | 25.0% |
| ! | ACAAATTAAGAACCAAATAG+AGG | - | chr1.4:5377510-5377529 | MS.gene66497:intron | 25.0% |
| ! | ACTTAAACTAATGTCAAAAG+AGG | - | chr1.4:5375449-5375468 | MS.gene66497:CDS | 25.0% |
| ! | AGAGTAATAGGAATAAATGA+TGG | + | chr1.4:5379636-5379655 | None:intergenic | 25.0% |
| ! | ATACATTTCCATTATTGACA+CGG | + | chr1.4:5379480-5379499 | None:intergenic | 25.0% |
| ! | ATATACAAGTGCATCTAAAT+AGG | + | chr1.4:5376442-5376461 | None:intergenic | 25.0% |
| ! | ATTTAAACTTAGAAGAGTTG+TGG | - | chr1.4:5376630-5376649 | MS.gene66497:CDS | 25.0% |
| ! | ATTTGTATGAATTAGTGTCT+AGG | - | chr1.4:5374752-5374771 | MS.gene66497:CDS | 25.0% |
| ! | CCAAAATATGCAAAAAAATG+TGG | + | chr1.4:5375552-5375571 | None:intergenic | 25.0% |
| ! | CCTTAAAATTCAAGATTCTT+AGG | + | chr1.4:5379681-5379700 | None:intergenic | 25.0% |
| ! | CTTAAAAAAATTGTATGTGG+AGG | - | chr1.4:5378883-5378902 | MS.gene66497:CDS | 25.0% |
| ! | GTAGAAATGATAATCAATGA+GGG | - | chr1.4:5375833-5375852 | MS.gene66497:CDS | 25.0% |
| ! | TAGAAATGATAATCAATGAG+GGG | - | chr1.4:5375834-5375853 | MS.gene66497:CDS | 25.0% |
| ! | TATACAAGTGCATCTAAATA+GGG | + | chr1.4:5376441-5376460 | None:intergenic | 25.0% |
| ! | TGGCAAAGATAATAATAAGT+TGG | + | chr1.4:5376937-5376956 | None:intergenic | 25.0% |
| ! | TGTAGAAATGATAATCAATG+AGG | - | chr1.4:5375832-5375851 | MS.gene66497:CDS | 25.0% |
| ! | TTACTTATTCTTCATGTACA+AGG | + | chr1.4:5377607-5377626 | None:intergenic | 25.0% |
| ! | TTGTTTGTGAATTAGTTATG+TGG | - | chr1.4:5374989-5375008 | MS.gene66497:intron | 25.0% |
| ! | TTTGGTGAATTAGTTATGTA+GGG | - | chr1.4:5374855-5374874 | MS.gene66497:intron | 25.0% |
| !! | ATGGAGATAATTTTCGTTTT+AGG | - | chr1.4:5378307-5378326 | MS.gene66497:intron | 25.0% |
| !! | CATATTTTGTAAAACGTTGT+TGG | - | chr1.4:5379734-5379753 | MS.gene66497:CDS | 25.0% |
| !! | CCTAAGAATCTTGAATTTTA+AGG | - | chr1.4:5379678-5379697 | MS.gene66497:CDS | 25.0% |
| !! | GTTTAAGCATTTTTATTCCA+CGG | - | chr1.4:5375505-5375524 | MS.gene66497:intron | 25.0% |
| !! | GTTTATTGTTTCTCAAAACT+GGG | + | chr1.4:5376296-5376315 | None:intergenic | 25.0% |
| !! | TAAGTAAAAACACAAGTTGA+TGG | + | chr1.4:5376957-5376976 | None:intergenic | 25.0% |
| !! | TAGTGAGAAGGTATAAAAAT+TGG | - | chr1.4:5378519-5378538 | MS.gene66497:intron | 25.0% |
| !! | TTTAAGCATTTTTATTCCAC+GGG | - | chr1.4:5375506-5375525 | MS.gene66497:intron | 25.0% |
| !! | TTTACTTGAATCACTGTTTT+TGG | - | chr1.4:5374837-5374856 | MS.gene66497:intron | 25.0% |
| !! | TTTATTGTTTCTCAAAACTG+GGG | + | chr1.4:5376295-5376314 | None:intergenic | 25.0% |
| !! | TTTTCTCAATTTAGATGTAG+GGG | - | chr1.4:5375962-5375981 | MS.gene66497:intron | 25.0% |
| !! | TTTTGGTGAATTAGTTATGT+AGG | - | chr1.4:5374854-5374873 | MS.gene66497:intron | 25.0% |
| !! | TTTTTCTTCATCATTTGCAA+GGG | + | chr1.4:5378239-5378258 | None:intergenic | 25.0% |
| !!! | ATCTGTTTTTTTTGTAAACC+CGG | - | chr1.4:5376053-5376072 | MS.gene66497:CDS | 25.0% |
| !!! | ATGTTCTAGTTTCTTGATTA+GGG | - | chr1.4:5378984-5379003 | MS.gene66497:intron | 25.0% |
| !!! | CCACATTTTTTTGCATATTT+TGG | - | chr1.4:5375549-5375568 | MS.gene66497:intron | 25.0% |
| !!! | CTCCACATACAATTTTTTTA+AGG | + | chr1.4:5378885-5378904 | None:intergenic | 25.0% |
| !!! | GTAAATTAAACTTAGCTTGT+AGG | - | chr1.4:5378735-5378754 | MS.gene66497:intron | 25.0% |
| !!! | TATGTTCTAGTTTCTTGATT+AGG | - | chr1.4:5378983-5379002 | MS.gene66497:intron | 25.0% |
| !!! | TTCTTCATTTGTTCCTTTTT+TGG | - | chr1.4:5377295-5377314 | MS.gene66497:CDS | 25.0% |
| !!! | TTGCTTGTTGTTACATAATT+GGG | - | chr1.4:5375321-5375340 | MS.gene66497:intron | 25.0% |
| !!! | TTTATCTTTTTGGTTGTGTA+CGG | - | chr1.4:5375886-5375905 | MS.gene66497:CDS | 25.0% |
| !!! | TTTGCTTGTTGTTACATAAT+TGG | - | chr1.4:5375320-5375339 | MS.gene66497:intron | 25.0% |
| !!! | TTTGTGTTTTTGTTACAGAA+TGG | - | chr1.4:5374546-5374565 | MS.gene66497:intron | 25.0% |
| !!! | TTTTGTTTTGTTACGAGTAT+AGG | - | chr1.4:5377982-5378001 | MS.gene66497:intron | 25.0% |
| AAAAAAATGTGGGAAGTTTG+TGG | + | chr1.4:5375541-5375560 | None:intergenic | 30.0% | |
| AAAAGGAGAAGTTGAATGAA+AGG | - | chr1.4:5377833-5377852 | MS.gene66497:intron | 30.0% | |
| AAACAATCTGTATGTTGTTG+AGG | - | chr1.4:5376805-5376824 | MS.gene66497:intron | 30.0% | |
| AAAGATACAACCACAATAGT+TGG | - | chr1.4:5377448-5377467 | MS.gene66497:intron | 30.0% | |
| AACAATCTGTATGTTGTTGA+GGG | - | chr1.4:5376806-5376825 | MS.gene66497:intron | 30.0% | |
| AACAGTACCTATAAGTGAAT+TGG | + | chr1.4:5377350-5377369 | None:intergenic | 30.0% | |
| AACTATTGTGGTTGTATCTT+TGG | + | chr1.4:5377449-5377468 | None:intergenic | 30.0% | |
| AAGTTATAGTTCATGTGAAC+CGG | - | chr1.4:5376402-5376421 | MS.gene66497:intron | 30.0% | |
| AATCATATGAATAGCAGAAG+AGG | - | chr1.4:5376245-5376264 | MS.gene66497:CDS | 30.0% | |
| ACAAAAAGATATCCAATGCA+AGG | - | chr1.4:5377013-5377032 | MS.gene66497:CDS | 30.0% | |
| ACACCATCATTAACAATCTT+AGG | + | chr1.4:5374654-5374673 | None:intergenic | 30.0% | |
| ACAGTACCTATAAGTGAATT+GGG | + | chr1.4:5377349-5377368 | None:intergenic | 30.0% | |
| ACTGAACCAAATTTATGGTT+CGG | - | chr1.4:5376001-5376020 | MS.gene66497:intron | 30.0% | |
| AGTTTCTTGATTAGGGAAAT+TGG | - | chr1.4:5378991-5379010 | MS.gene66497:intron | 30.0% | |
| ATACAAGTGCATCTAAATAG+GGG | + | chr1.4:5376440-5376459 | None:intergenic | 30.0% | |
| ATCATATGAATAGCAGAAGA+GGG | - | chr1.4:5376246-5376265 | MS.gene66497:CDS | 30.0% | |
| CAAAAAGATATCCAATGCAA+GGG | - | chr1.4:5377014-5377033 | MS.gene66497:CDS | 30.0% | |
| CAAACCATTTATAATGATGC+GGG | + | chr1.4:5378762-5378781 | None:intergenic | 30.0% | |
| CATGAACTGAACCAAATTTA+TGG | - | chr1.4:5375996-5376015 | MS.gene66497:intron | 30.0% | |
| CCTCTGCAATTATCAAAATA+GGG | + | chr1.4:5377080-5377099 | None:intergenic | 30.0% | |
| GGATCTTATTAACATACTAG+AGG | - | chr1.4:5377035-5377054 | MS.gene66497:CDS | 30.0% | |
| GGTTCAATACGATTCAAAAT+CGG | - | chr1.4:5376074-5376093 | MS.gene66497:intron | 30.0% | |
| GTTCATTGCTTAGCAATTAT+TGG | - | chr1.4:5375575-5375594 | MS.gene66497:CDS | 30.0% | |
| GTTTCTTGATTAGGGAAATT+GGG | - | chr1.4:5378992-5379011 | MS.gene66497:intron | 30.0% | |
| TAATTTCAACCCAGAATTGA+AGG | + | chr1.4:5376184-5376203 | None:intergenic | 30.0% | |
| TATCTTCCCAATTCACTTAT+AGG | - | chr1.4:5377340-5377359 | MS.gene66497:CDS | 30.0% | |
| TATGAAACACAAACACCTTT+GGG | - | chr1.4:5375654-5375673 | MS.gene66497:intron | 30.0% | |
| TCATGCATATTGTTGCAAAA+TGG | - | chr1.4:5378847-5378866 | MS.gene66497:CDS | 30.0% | |
| TCCTCTGCAATTATCAAAAT+AGG | + | chr1.4:5377081-5377100 | None:intergenic | 30.0% | |
| TCTCCTAAGATTGTTAATGA+TGG | - | chr1.4:5374648-5374667 | MS.gene66497:intron | 30.0% | |
| TGATTTAAGAACCTCGTATT+TGG | + | chr1.4:5378830-5378849 | None:intergenic | 30.0% | |
| TGCAGAACAAGATTATGAAA+AGG | - | chr1.4:5377816-5377835 | MS.gene66497:intron | 30.0% | |
| TTTCTTGATTAGGGAAATTG+GGG | - | chr1.4:5378993-5379012 | MS.gene66497:intron | 30.0% | |
| ! | ATTTTGAATCGTATTGAACC+GGG | + | chr1.4:5376074-5376093 | None:intergenic | 30.0% |
| ! | CTCATATTTTCTTCACCTTT+AGG | - | chr1.4:5378132-5378151 | MS.gene66497:intron | 30.0% |
| ! | CTTTTTCTTCATCATTTGCA+AGG | + | chr1.4:5378240-5378259 | None:intergenic | 30.0% |
| ! | GATTTTGAATCGTATTGAAC+CGG | + | chr1.4:5376075-5376094 | None:intergenic | 30.0% |
| ! | GCCATGCAAACAATTTTTAA+GGG | + | chr1.4:5377567-5377586 | None:intergenic | 30.0% |
| ! | GGTTTATTGTTTCTCAAAAC+TGG | + | chr1.4:5376297-5376316 | None:intergenic | 30.0% |
| ! | TGATTTGCAGAGAAGTTAAA+AGG | + | chr1.4:5377946-5377965 | None:intergenic | 30.0% |
| ! | TGCCATGCAAACAATTTTTA+AGG | + | chr1.4:5377568-5377587 | None:intergenic | 30.0% |
| !! | AAAACATTAGCCTTCAATTC+TGG | - | chr1.4:5376171-5376190 | MS.gene66497:intron | 30.0% |
| !! | AAACATTAGCCTTCAATTCT+GGG | - | chr1.4:5376172-5376191 | MS.gene66497:intron | 30.0% |
| !! | ATTTAATTTGTCCGAGTGTA+AGG | - | chr1.4:5374944-5374963 | MS.gene66497:intron | 30.0% |
| !! | ATTTGATTTGTCTGAGTTCA+GGG | - | chr1.4:5374806-5374825 | MS.gene66497:intron | 30.0% |
| !! | CCATGCAAACAATTTTTAAG+GGG | + | chr1.4:5377566-5377585 | None:intergenic | 30.0% |
| !! | TAAATTTGTTGAAGTCTCAC+TGG | - | chr1.4:5378926-5378945 | MS.gene66497:CDS | 30.0% |
| !! | TATTTGATTTGTCTGAGTTC+AGG | - | chr1.4:5374805-5374824 | MS.gene66497:intron | 30.0% |
| !! | TGAGAATATTGGTGCTAAAT+TGG | - | chr1.4:5375150-5375169 | MS.gene66497:intron | 30.0% |
| !! | TGCTTGTTGTTACATAATTG+GGG | - | chr1.4:5375322-5375341 | MS.gene66497:intron | 30.0% |
| !! | TTTAATTTGTCCGAGTGTAA+GGG | - | chr1.4:5374945-5374964 | MS.gene66497:intron | 30.0% |
| !!! | TTGTTCCTTTTTTGGTTTAG+CGG | - | chr1.4:5377303-5377322 | MS.gene66497:CDS | 30.0% |
| AAATCTTAGACCCTTACACT+CGG | + | chr1.4:5374958-5374977 | None:intergenic | 35.0% | |
| AATTGTATGTGGAGGATGTT+AGG | - | chr1.4:5378891-5378910 | MS.gene66497:CDS | 35.0% | |
| ACAGTTACACACAGAGTAAT+AGG | + | chr1.4:5379648-5379667 | None:intergenic | 35.0% | |
| ACATACCTGAATTGTCCATA+GGG | + | chr1.4:5379405-5379424 | None:intergenic | 35.0% | |
| ACTGAACCGAACCATAAATT+TGG | + | chr1.4:5376010-5376029 | None:intergenic | 35.0% | |
| AGAAGATGGGAATGAAGAAA+TGG | + | chr1.4:5374332-5374351 | None:intergenic | 35.0% | |
| ATGAAGATTTGATGTCTGCT+GGG | - | chr1.4:5378655-5378674 | MS.gene66497:CDS | 35.0% | |
| CAAATCTTCATATTTGCCAG+TGG | + | chr1.4:5378646-5378665 | None:intergenic | 35.0% | |
| CAATAAGAAACACACCTCTT+TGG | + | chr1.4:5374685-5374704 | None:intergenic | 35.0% | |
| CATACGAGTGGTCATATATA+AGG | - | chr1.4:5377716-5377735 | MS.gene66497:intron | 35.0% | |
| CCCCTTAAAAATTGTTTGCA+TGG | - | chr1.4:5377563-5377582 | MS.gene66497:intron | 35.0% | |
| CTATGAAACACAAACACCTT+TGG | - | chr1.4:5375653-5375672 | MS.gene66497:intron | 35.0% | |
| CTTGATACGAAACTTTGACT+TGG | - | chr1.4:5379141-5379160 | MS.gene66497:intron | 35.0% | |
| CTTGCAGTTCTCAAATTCAA+CGG | + | chr1.4:5376891-5376910 | None:intergenic | 35.0% | |
| GAGTTGCATTTCAACAAAGA+TGG | - | chr1.4:5374430-5374449 | MS.gene66497:intron | 35.0% | |
| GCAAAAAATGCTGGTGTAAA+TGG | - | chr1.4:5378487-5378506 | MS.gene66497:intron | 35.0% | |
| GGATATTGAACAAGAAGCTT+TGG | - | chr1.4:5377098-5377117 | MS.gene66497:intron | 35.0% | |
| GTATGCTGCATACATACATT+TGG | + | chr1.4:5377701-5377720 | None:intergenic | 35.0% | |
| GTTAATAAGATCCCTTGCAT+TGG | + | chr1.4:5377028-5377047 | None:intergenic | 35.0% | |
| TAAGCATTCACACACATAGA+AGG | + | chr1.4:5379193-5379212 | None:intergenic | 35.0% | |
| TAATTTCAGAGGGTAGCTAA+GGG | + | chr1.4:5378464-5378483 | None:intergenic | 35.0% | |
| TACATACCTGAATTGTCCAT+AGG | + | chr1.4:5379406-5379425 | None:intergenic | 35.0% | |
| TATGAAGATTTGATGTCTGC+TGG | - | chr1.4:5378654-5378673 | MS.gene66497:CDS | 35.0% | |
| TCAAGATGGCAATATCATCA+AGG | + | chr1.4:5377209-5377228 | None:intergenic | 35.0% | |
| TCACTGTCTGTAACAAAGTA+GGG | + | chr1.4:5376860-5376879 | None:intergenic | 35.0% | |
| TCATATGAATAGCAGAAGAG+GGG | - | chr1.4:5376247-5376266 | MS.gene66497:intron | 35.0% | |
| TGTTTGCATTTGCGTTCAAA+AGG | - | chr1.4:5375108-5375127 | MS.gene66497:intron | 35.0% | |
| TTAATTTCAGAGGGTAGCTA+AGG | + | chr1.4:5378465-5378484 | None:intergenic | 35.0% | |
| TTAGCACCAATATTCTCAAC+CGG | + | chr1.4:5375148-5375167 | None:intergenic | 35.0% | |
| TTATAAACCTCCTGTCAAGA+TGG | + | chr1.4:5377223-5377242 | None:intergenic | 35.0% | |
| TTATAATTAAAACGCGACGC+AGG | - | chr1.4:5378414-5378433 | MS.gene66497:intron | 35.0% | |
| TTCTATTGCCGTGTCAATAA+TGG | - | chr1.4:5379469-5379488 | MS.gene66497:CDS | 35.0% | |
| TTGGAGTTATGCATAACGTT+AGG | - | chr1.4:5377654-5377673 | MS.gene66497:intron | 35.0% | |
| TTTGTTGAAATGCAACTCCT+TGG | + | chr1.4:5374428-5374447 | None:intergenic | 35.0% | |
| ! | ATTTTATAGGTTGTTGCAGC+AGG | - | chr1.4:5375366-5375385 | MS.gene66497:intron | 35.0% |
| ! | CTGTGTTGTTGTTGAGATAA+AGG | - | chr1.4:5379354-5379373 | MS.gene66497:intron | 35.0% |
| ! | CTTGTTGTGAACAAACTTAG+AGG | - | chr1.4:5377126-5377145 | MS.gene66497:intron | 35.0% |
| ! | CTTTCTTTTCTCCTAGGATT+CGG | - | chr1.4:5379767-5379786 | MS.gene66497:CDS | 35.0% |
| ! | TATAGGTACTGTTATCAGAG+AGG | - | chr1.4:5377357-5377376 | MS.gene66497:CDS | 35.0% |
| ! | TCTCACTGGACTTTTAATGT+GGG | - | chr1.4:5378940-5378959 | MS.gene66497:intron | 35.0% |
| !! | AACTACTACCTCTGTTGTTT+TGG | - | chr1.4:5375216-5375235 | MS.gene66497:intron | 35.0% |
| !! | CAAAGGTGTTTGTGTTTCAT+AGG | + | chr1.4:5375655-5375674 | None:intergenic | 35.0% |
| !! | GTTTTGTTACGAGTATAGGT+TGG | - | chr1.4:5377986-5378005 | MS.gene66497:intron | 35.0% |
| !! | TCTTATTGCAGAAGGTGTTA+AGG | - | chr1.4:5375246-5375265 | MS.gene66497:intron | 35.0% |
| !! | TGCAAACAATTTTTAAGGGG+TGG | + | chr1.4:5377563-5377582 | None:intergenic | 35.0% |
| !! | TTGAGTAAGGTTGGTAGAAA+GGG | - | chr1.4:5376749-5376768 | MS.gene66497:intron | 35.0% |
| !! | TTTTGATGTGGGGTGTTTAA+GGG | - | chr1.4:5374884-5374903 | MS.gene66497:intron | 35.0% |
| !!! | CCCTATTTTGATAATTGCAG+AGG | - | chr1.4:5377077-5377096 | MS.gene66497:intron | 35.0% |
| !!! | TAGGGTGTTTGTTTTGATGT+GGG | - | chr1.4:5374873-5374892 | MS.gene66497:intron | 35.0% |
| !!! | TGGAGTGTTTGTTTTGATGT+GGG | - | chr1.4:5375009-5375028 | MS.gene66497:intron | 35.0% |
| AAGAGAGGGAAACCTCTATT+TGG | + | chr1.4:5377525-5377544 | None:intergenic | 40.0% | |
| ACAAACTGAGACAGAACTCA+AGG | - | chr1.4:5378012-5378031 | MS.gene66497:intron | 40.0% | |
| ACCAACCGCTAAACCAAAAA+AGG | + | chr1.4:5377311-5377330 | None:intergenic | 40.0% | |
| ACGATTCAAAATCGGTGAAC+TGG | - | chr1.4:5376082-5376101 | MS.gene66497:intron | 40.0% | |
| ACTGAAGATTGCAGCACTTA+AGG | - | chr1.4:5377152-5377171 | MS.gene66497:intron | 40.0% | |
| ACTTCCATCACCAACTATTG+TGG | + | chr1.4:5377461-5377480 | None:intergenic | 40.0% | |
| AGAACAACATTCCTTCCCTT+AGG | + | chr1.4:5374612-5374631 | None:intergenic | 40.0% | |
| AGGCAGAAACATGCACAATA+AGG | + | chr1.4:5379065-5379084 | None:intergenic | 40.0% | |
| ATGATTGTGAATAACCCACC+TGG | + | chr1.4:5374474-5374493 | None:intergenic | 40.0% | |
| CAACATGTCTGCATCATGTT+AGG | - | chr1.4:5376570-5376589 | MS.gene66497:CDS | 40.0% | |
| CGAATCCTAGGAGAAAAGAA+AGG | + | chr1.4:5379769-5379788 | None:intergenic | 40.0% | |
| CGTTGAATTTGAGAACTGCA+AGG | - | chr1.4:5376889-5376908 | MS.gene66497:CDS | 40.0% | |
| CTAGAGGACGCAATTAGAAA+CGG | - | chr1.4:5377051-5377070 | MS.gene66497:CDS | 40.0% | |
| CTCACTGTCTGTAACAAAGT+AGG | + | chr1.4:5376861-5376880 | None:intergenic | 40.0% | |
| GAAAGGATTGCAAAACTGTC+TGG | - | chr1.4:5377850-5377869 | MS.gene66497:intron | 40.0% | |
| GAGCTTATCGAACCAGTAAA+AGG | + | chr1.4:5378115-5378134 | None:intergenic | 40.0% | |
| GATGATATTGCCATCTTGAC+AGG | - | chr1.4:5377210-5377229 | MS.gene66497:CDS | 40.0% | |
| GCTAAGCAATGTAATCCCAA+AGG | + | chr1.4:5375624-5375643 | None:intergenic | 40.0% | |
| GGTAGGAAATATGATAGCTG+AGG | - | chr1.4:5376724-5376743 | MS.gene66497:intron | 40.0% | |
| GGTTGTGTACGGATAAATGA+AGG | - | chr1.4:5375897-5375916 | MS.gene66497:CDS | 40.0% | |
| GTTGTTCTTGAGAGCAAGTA+TGG | - | chr1.4:5374624-5374643 | MS.gene66497:intron | 40.0% | |
| TAAGCATTCACACGCATAGA+AGG | + | chr1.4:5379085-5379104 | None:intergenic | 40.0% | |
| TACAATACCCTCTTCAACAG+CGG | + | chr1.4:5378158-5378177 | None:intergenic | 40.0% | |
| TACTCCTTGAACACATCTGT+GGG | - | chr1.4:5375796-5375815 | MS.gene66497:intron | 40.0% | |
| TATAACACACACACACACAC+AGG | - | chr1.4:5376513-5376532 | MS.gene66497:intron | 40.0% | |
| TATGGATATAATGCTGCCAC+TGG | - | chr1.4:5378627-5378646 | MS.gene66497:CDS | 40.0% | |
| TCGCTTTGTAACTGCTTCTT+GGG | + | chr1.4:5377485-5377504 | None:intergenic | 40.0% | |
| TCTTTGCTTCAACATGCCTT+AGG | - | chr1.4:5375773-5375792 | MS.gene66497:intron | 40.0% | |
| TGCCAAATCATTTGTCTTGG+CGG | + | chr1.4:5375188-5375207 | None:intergenic | 40.0% | |
| TGCTAAATTGGTTAGACAGG+CGG | - | chr1.4:5375162-5375181 | MS.gene66497:intron | 40.0% | |
| TGGCAATATCATCAAGGTAC+TGG | + | chr1.4:5377203-5377222 | None:intergenic | 40.0% | |
| TGGGAATGAAGAAATGGAAG+CGG | + | chr1.4:5374326-5374345 | None:intergenic | 40.0% | |
| TGGGATCATTGATCCTACAA+AGG | - | chr1.4:5378674-5378693 | MS.gene66497:CDS | 40.0% | |
| TGTGAACAAGCTTGCAGATT+TGG | - | chr1.4:5374569-5374588 | MS.gene66497:intron | 40.0% | |
| TGTTGAGATAAAGGAACCTG+AGG | - | chr1.4:5379363-5379382 | MS.gene66497:intron | 40.0% | |
| TTGCATTTGCGTTCAAAAGG+TGG | - | chr1.4:5375111-5375130 | MS.gene66497:intron | 40.0% | |
| TTGGTTTCGTACCAAATACG+AGG | - | chr1.4:5378816-5378835 | MS.gene66497:CDS | 40.0% | |
| TTTGCTCAGACTTGCATCAA+AGG | - | chr1.4:5378195-5378214 | MS.gene66497:intron | 40.0% | |
| ! | AACAAGCTTGCAGATTTGGT+TGG | - | chr1.4:5374573-5374592 | MS.gene66497:intron | 40.0% |
| ! | ATAGGGGTGTGCATAAAAAC+CGG | + | chr1.4:5376424-5376443 | None:intergenic | 40.0% |
| ! | ATTTTTATTCCACGGGCTTC+TGG | - | chr1.4:5375513-5375532 | MS.gene66497:intron | 40.0% |
| ! | GTCTCACTGGACTTTTAATG+TGG | - | chr1.4:5378939-5378958 | MS.gene66497:intron | 40.0% |
| ! | TATGAAGCACTAACGCCTTT+GGG | - | chr1.4:5375606-5375625 | MS.gene66497:CDS | 40.0% |
| ! | TGGTGCTAAATTGGTTAGAC+AGG | - | chr1.4:5375159-5375178 | MS.gene66497:intron | 40.0% |
| !! | ACAACCACAATAGTTGGTGA+TGG | - | chr1.4:5377454-5377473 | MS.gene66497:intron | 40.0% |
| !! | ACACAAACACCTTTGGGATT+AGG | - | chr1.4:5375660-5375679 | MS.gene66497:intron | 40.0% |
| !! | ATGTGTTCAAGGAGTACCTA+AGG | + | chr1.4:5375792-5375811 | None:intergenic | 40.0% |
| !! | ATTTTTAAGGGGTGGAGAGA+CGG | + | chr1.4:5377555-5377574 | None:intergenic | 40.0% |
| !! | GATTTGGTTGGTGTTACTCT+TGG | - | chr1.4:5374585-5374604 | MS.gene66497:intron | 40.0% |
| !! | GTTGAAGAGGGTATTGTAGT+TGG | - | chr1.4:5378160-5378179 | MS.gene66497:intron | 40.0% |
| !! | GTTGAGTAAGGTTGGTAGAA+AGG | - | chr1.4:5376748-5376767 | MS.gene66497:intron | 40.0% |
| !! | GTTTTGATGTGGGGTGTTTA+AGG | - | chr1.4:5374883-5374902 | MS.gene66497:intron | 40.0% |
| !! | GTTTTGATGTGGGGTGTTTA+GGG | - | chr1.4:5374883-5374902 | MS.gene66497:intron | 40.0% |
| !!! | AGGGTGTTTGTTTTGATGTG+GGG | - | chr1.4:5374874-5374893 | MS.gene66497:intron | 40.0% |
| !!! | GGAGTGTTTGTTTTGATGTG+GGG | - | chr1.4:5375010-5375029 | MS.gene66497:intron | 40.0% |
| !!! | GTAGGGTGTTTGTTTTGATG+TGG | - | chr1.4:5374872-5374891 | MS.gene66497:intron | 40.0% |
| !!! | GTGGAGTGTTTGTTTTGATG+TGG | - | chr1.4:5375008-5375027 | MS.gene66497:intron | 40.0% |
| !!! | TCCTTTTTTGGTTTAGCGGT+TGG | - | chr1.4:5377307-5377326 | MS.gene66497:CDS | 40.0% |
| !!! | TGTTTTGATGTGGGGTGTTT+AGG | - | chr1.4:5374882-5374901 | MS.gene66497:intron | 40.0% |
| AAAGCTGGGAATGAGGTTCT+AGG | - | chr1.4:5377400-5377419 | MS.gene66497:intron | 45.0% | |
| AATTAAAACGCGACGCAGGT+TGG | - | chr1.4:5378418-5378437 | MS.gene66497:intron | 45.0% | |
| ACCTTGAGCCAAAACAACAG+AGG | + | chr1.4:5375227-5375246 | None:intergenic | 45.0% | |
| ACTCCTTGAACACATCTGTG+GGG | - | chr1.4:5375797-5375816 | MS.gene66497:intron | 45.0% | |
| ACTGTTATCAGAGAGGAGGT+TGG | - | chr1.4:5377364-5377383 | MS.gene66497:CDS | 45.0% | |
| AGACGCTCTTAACGCTACAA+AGG | - | chr1.4:5378054-5378073 | MS.gene66497:intron | 45.0% | |
| AGGATTGCAAAACTGTCTGG+TGG | - | chr1.4:5377853-5377872 | MS.gene66497:intron | 45.0% | |
| AGGGCCCGCATCATTATAAA+TGG | - | chr1.4:5378755-5378774 | MS.gene66497:intron | 45.0% | |
| ATACCACGTGTGATAAGCAC+AGG | + | chr1.4:5375399-5375418 | None:intergenic | 45.0% | |
| CACCTGGAGTTTCTTGATAG+CGG | + | chr1.4:5374458-5374477 | None:intergenic | 45.0% | |
| CAGAAGAGGGGTTGTGAAAT+GGG | - | chr1.4:5376259-5376278 | MS.gene66497:intron | 45.0% | |
| CATTCGAATCGTCGAGTTTG+CGG | - | chr1.4:5379437-5379456 | MS.gene66497:CDS | 45.0% | |
| CTAACCACCTGGACAAGATT+AGG | + | chr1.4:5379283-5379302 | None:intergenic | 45.0% | |
| CTCGCTTTGTAACTGCTTCT+TGG | + | chr1.4:5377486-5377505 | None:intergenic | 45.0% | |
| CTTAGACAAAGCTGGGAATG+AGG | - | chr1.4:5377393-5377412 | MS.gene66497:intron | 45.0% | |
| GAATGAAGAAATGGAAGCGG+AGG | + | chr1.4:5374323-5374342 | None:intergenic | 45.0% | |
| GAGACAAAGCCTAATCCCAA+AGG | + | chr1.4:5375672-5375691 | None:intergenic | 45.0% | |
| GAGGATCCGGTTGAGAATAT+TGG | - | chr1.4:5375139-5375158 | MS.gene66497:intron | 45.0% | |
| GATATTGCCATCTTGACAGG+AGG | - | chr1.4:5377213-5377232 | MS.gene66497:CDS | 45.0% | |
| GCCTGCCAAATCATTTGTCT+TGG | + | chr1.4:5375191-5375210 | None:intergenic | 45.0% | |
| GCCTTAGCTTAGACAAAGCT+GGG | - | chr1.4:5377386-5377405 | MS.gene66497:CDS | 45.0% | |
| GCTATCAAGAAACTCCAGGT+GGG | - | chr1.4:5374457-5374476 | MS.gene66497:intron | 45.0% | |
| GGATAGTGAATTGGCTGATG+TGG | - | chr1.4:5376673-5376692 | MS.gene66497:CDS | 45.0% | |
| GTACTCCTTGAACACATCTG+TGG | - | chr1.4:5375795-5375814 | MS.gene66497:intron | 45.0% | |
| GTATGTATGCAGCATACGAG+TGG | - | chr1.4:5377704-5377723 | MS.gene66497:intron | 45.0% | |
| GTTGTGGTTGTGTGAATTGC+AGG | - | chr1.4:5376646-5376665 | MS.gene66497:CDS | 45.0% | |
| GTTGTGTGAATTGCAGGTTG+AGG | - | chr1.4:5376652-5376671 | MS.gene66497:CDS | 45.0% | |
| TAACCCCACAGATGTGTTCA+AGG | + | chr1.4:5375803-5375822 | None:intergenic | 45.0% | |
| TACCACGTGTGATAAGCACA+GGG | + | chr1.4:5375398-5375417 | None:intergenic | 45.0% | |
| TAGTGCAGGGAACAATCATG+AGG | - | chr1.4:5376703-5376722 | MS.gene66497:intron | 45.0% | |
| TCCAACGACGATACGAGATA+TGG | - | chr1.4:5378609-5378628 | MS.gene66497:CDS | 45.0% | |
| TCCATATCTCGTATCGTCGT+TGG | + | chr1.4:5378613-5378632 | None:intergenic | 45.0% | |
| TTACTCTTGGTCCTAAGGGA+AGG | - | chr1.4:5374598-5374617 | MS.gene66497:intron | 45.0% | |
| TTCCGCTATCAAGAAACTCC+AGG | - | chr1.4:5374453-5374472 | MS.gene66497:intron | 45.0% | |
| TTCTGCGAGTGGAAGAAGAT+GGG | + | chr1.4:5374345-5374364 | None:intergenic | 45.0% | |
| TTGCGTTCAAAAGGTGGAGT+TGG | - | chr1.4:5375117-5375136 | MS.gene66497:intron | 45.0% | |
| TTTCTGCGAGTGGAAGAAGA+TGG | + | chr1.4:5374346-5374365 | None:intergenic | 45.0% | |
| ! | ACAAATGATTTGGCAGGCGA+TGG | - | chr1.4:5375193-5375212 | MS.gene66497:intron | 45.0% |
| ! | ACTGGTAGTTTTTCTGCGAG+TGG | + | chr1.4:5374356-5374375 | None:intergenic | 45.0% |
| ! | AGGTACTGTTATCAGAGAGG+AGG | - | chr1.4:5377360-5377379 | MS.gene66497:CDS | 45.0% |
| ! | CTATGAAGCACTAACGCCTT+TGG | - | chr1.4:5375605-5375624 | MS.gene66497:CDS | 45.0% |
| ! | CTCTGCCTTTCTTTTCTCCT+AGG | - | chr1.4:5379761-5379780 | MS.gene66497:CDS | 45.0% |
| ! | GAAGCATCCTAATCTTGTCC+AGG | - | chr1.4:5379273-5379292 | MS.gene66497:intron | 45.0% |
| ! | GCAGGTTGAGGATAGTGAAT+TGG | - | chr1.4:5376664-5376683 | MS.gene66497:CDS | 45.0% |
| ! | GCCAAGACAAATGATTTGGC+AGG | - | chr1.4:5375187-5375206 | MS.gene66497:intron | 45.0% |
| ! | TCCCAGCTTTGTCTAAGCTA+AGG | + | chr1.4:5377390-5377409 | None:intergenic | 45.0% |
| ! | TGGCAGTGTTGTTAGTGAGA+AGG | - | chr1.4:5378507-5378526 | MS.gene66497:intron | 45.0% |
| ! | TTTAAGGTTCCGACTCTTCC+TGG | + | chr1.4:5374392-5374411 | None:intergenic | 45.0% |
| ! | TTTAGATGTAGGGGTGTGCA+TGG | - | chr1.4:5375971-5375990 | MS.gene66497:intron | 45.0% |
| !! | AAAGGGTGTCGTTACACTTG+AGG | - | chr1.4:5376766-5376785 | MS.gene66497:intron | 45.0% |
| !! | AGGGTATTGTAGTTGGTGGT+GGG | - | chr1.4:5378167-5378186 | MS.gene66497:intron | 45.0% |
| !! | GAAGAGGGTATTGTAGTTGG+TGG | - | chr1.4:5378163-5378182 | MS.gene66497:intron | 45.0% |
| !! | GCTCAAGGTCTTATTGCAGA+AGG | - | chr1.4:5375238-5375257 | MS.gene66497:intron | 45.0% |
| !! | GGTGTTACTCTTGGTCCTAA+GGG | - | chr1.4:5374594-5374613 | MS.gene66497:intron | 45.0% |
| !! | TGGTGTTACTCTTGGTCCTA+AGG | - | chr1.4:5374593-5374612 | MS.gene66497:intron | 45.0% |
| !! | TTTTTAAGGGGTGGAGAGAC+GGG | + | chr1.4:5377554-5377573 | None:intergenic | 45.0% |
| !!! | ACCTCTGTTGTTTTGGCTCA+AGG | - | chr1.4:5375223-5375242 | MS.gene66497:intron | 45.0% |
| !!! | AAAAATTGATTTTTTTTTAA+TGG | - | chr1.4:5374507-5374526 | MS.gene66497:intron | 5.0% |
| !!! | TTAAAATTTTAAAAACAATT+TGG | + | chr1.4:5376318-5376337 | None:intergenic | 5.0% |
| !!! | TTGTTTTTAAAATTTTAAAT+TGG | - | chr1.4:5376320-5376339 | MS.gene66497:intron | 5.0% |
| AAAGGTGGAGTTGGAGGATC+CGG | - | chr1.4:5375126-5375145 | MS.gene66497:intron | 50.0% | |
| AAATGGAAGCGGAGGAAGAG+AGG | + | chr1.4:5374315-5374334 | None:intergenic | 50.0% | |
| AACCCTGTGCTTATCACACG+TGG | - | chr1.4:5375393-5375412 | MS.gene66497:CDS | 50.0% | |
| AGAGACGGGGAAAGAAAGAG+AGG | + | chr1.4:5377540-5377559 | None:intergenic | 50.0% | |
| ATCTTTGGTGAGCACCACCT+TGG | + | chr1.4:5377434-5377453 | None:intergenic | 50.0% | |
| ATGTGGCAGCAGTTAGTGCA+GGG | - | chr1.4:5376690-5376709 | MS.gene66497:CDS | 50.0% | |
| ATTGCAGCACTTAAGGCTCC+TGG | - | chr1.4:5377159-5377178 | MS.gene66497:intron | 50.0% | |
| CCAAGCAACATCTAACCACC+TGG | + | chr1.4:5379294-5379313 | None:intergenic | 50.0% | |
| CCAGGTGGTTAGATGTTGCT+TGG | - | chr1.4:5379291-5379310 | MS.gene66497:intron | 50.0% | |
| CGCTATCAAGAAACTCCAGG+TGG | - | chr1.4:5374456-5374475 | MS.gene66497:intron | 50.0% | |
| CGTTCAAAAGGTGGAGTTGG+AGG | - | chr1.4:5375120-5375139 | MS.gene66497:intron | 50.0% | |
| CTCTTGCGTTCTCCAAATCC+AGG | + | chr1.4:5377180-5377199 | None:intergenic | 50.0% | |
| CTTTAGGCCGCTGTTGAAGA+GGG | - | chr1.4:5378148-5378167 | MS.gene66497:intron | 50.0% | |
| GAAATGCAACTCCTTGGCCA+TGG | + | chr1.4:5374422-5374441 | None:intergenic | 50.0% | |
| GAACCTTAAAGTCTCCGCCA+TGG | - | chr1.4:5374402-5374421 | MS.gene66497:intron | 50.0% | |
| GAGACGGGGAAAGAAAGAGA+GGG | + | chr1.4:5377539-5377558 | None:intergenic | 50.0% | |
| GAGGGGTTGTGAAATGGGTA+CGG | - | chr1.4:5376264-5376283 | MS.gene66497:intron | 50.0% | |
| GCACTTAAGGCTCCTGGATT+TGG | - | chr1.4:5377165-5377184 | MS.gene66497:intron | 50.0% | |
| GCAGAAGAGGGGTTGTGAAA+TGG | - | chr1.4:5376258-5376277 | MS.gene66497:intron | 50.0% | |
| GCAGGGAACAATCATGAGGT+AGG | - | chr1.4:5376707-5376726 | MS.gene66497:intron | 50.0% | |
| GCATCCTAATCTTGTCCAGG+TGG | - | chr1.4:5379276-5379295 | MS.gene66497:intron | 50.0% | |
| GCTCAGACTTGCATCAAAGG+TGG | - | chr1.4:5378198-5378217 | MS.gene66497:intron | 50.0% | |
| GGCAACCCTATGGACAATTC+AGG | - | chr1.4:5379397-5379416 | MS.gene66497:CDS | 50.0% | |
| GGCCGCCAAGACAAATGATT+TGG | - | chr1.4:5375183-5375202 | MS.gene66497:intron | 50.0% | |
| GGCCTTAGCTTAGACAAAGC+TGG | - | chr1.4:5377385-5377404 | MS.gene66497:CDS | 50.0% | |
| TCGTTACACTTGAGGAGGGA+AGG | - | chr1.4:5376774-5376793 | MS.gene66497:intron | 50.0% | |
| TTGTCCATAGGGTTGCCAAC+AGG | + | chr1.4:5379394-5379413 | None:intergenic | 50.0% | |
| ! | GAGGGCATGCAATTTGATCG+AGG | - | chr1.4:5376824-5376843 | MS.gene66497:intron | 50.0% |
| ! | TGCAAAACTGTCTGGTGGTG+TGG | - | chr1.4:5377858-5377877 | MS.gene66497:intron | 50.0% |
| ! | TGGTGGTGTGGCTGTAATTC+AGG | - | chr1.4:5377870-5377889 | MS.gene66497:intron | 50.0% |
| !! | GAATGAGGTTCTAGGCACTG+CGG | - | chr1.4:5377408-5377427 | MS.gene66497:intron | 50.0% |
| !! | GAGGGTATTGTAGTTGGTGG+TGG | - | chr1.4:5378166-5378185 | MS.gene66497:intron | 50.0% |
| !! | GATAGCTGAGGCGTTGAGTA+AGG | - | chr1.4:5376736-5376755 | MS.gene66497:intron | 50.0% |
| !! | GGTGTCGTTACACTTGAGGA+GGG | - | chr1.4:5376770-5376789 | MS.gene66497:intron | 50.0% |
| !! | TGGTGTCACTGTTGCCAAAG+AGG | - | chr1.4:5374668-5374687 | MS.gene66497:CDS | 50.0% |
| !! | TTTTAAGGGGTGGAGAGACG+GGG | + | chr1.4:5377553-5377572 | None:intergenic | 50.0% |
| ACTCTTCCTGGAGAGAGCGA+CGG | + | chr1.4:5374380-5374399 | None:intergenic | 55.0% | |
| ATGCAACTCCTTGGCCATGG+CGG | + | chr1.4:5374419-5374438 | None:intergenic | 55.0% | |
| CCTCTTCAACAGCGGCCTAA+AGG | + | chr1.4:5378150-5378169 | None:intergenic | 55.0% | |
| CCTTTAGGCCGCTGTTGAAG+AGG | - | chr1.4:5378147-5378166 | MS.gene66497:intron | 55.0% | |
| GATGTGGCAGCAGTTAGTGC+AGG | - | chr1.4:5376689-5376708 | MS.gene66497:CDS | 55.0% | |
| GGAGGAAGAGAGGTTGCATG+AGG | + | chr1.4:5374305-5374324 | None:intergenic | 55.0% | |
| TAAAGTCTCCGCCATGGCCA+AGG | - | chr1.4:5374408-5374427 | MS.gene66497:intron | 55.0% | |
| TCGCTCTCTCCAGGAAGAGT+CGG | - | chr1.4:5374380-5374399 | MS.gene66497:intron | 55.0% | |
| TGCACCTGTTGGCAACCCTA+TGG | - | chr1.4:5379387-5379406 | MS.gene66497:intron | 55.0% | |
| TTTGTGGTACCAGAAGCCCG+TGG | + | chr1.4:5375525-5375544 | None:intergenic | 55.0% | |
| ! | TGGCCATGGCGGAGACTTTA+AGG | + | chr1.4:5374408-5374427 | None:intergenic | 55.0% |
| !! | GCTGAGGCGTTGAGTAAGGT+TGG | - | chr1.4:5376740-5376759 | MS.gene66497:intron | 55.0% |
| !! | GGGTGTCGTTACACTTGAGG+AGG | - | chr1.4:5376769-5376788 | MS.gene66497:intron | 55.0% |
| GAACCTGAGGCTGCACCTGT+TGG | - | chr1.4:5379376-5379395 | MS.gene66497:intron | 60.0% | |
| GCAACGACGCATGTCGGACA+TGG | + | chr1.4:5375694-5375713 | None:intergenic | 60.0% | |
| GTCCGACATGCGTCGTTGCA+CGG | - | chr1.4:5375695-5375714 | MS.gene66497:intron | 60.0% | |
| TGCCGTGCAACGACGCATGT+CGG | + | chr1.4:5375700-5375719 | None:intergenic | 60.0% | |
| TTGCCAACAGGTGCAGCCTC+AGG | + | chr1.4:5379382-5379401 | None:intergenic | 60.0% | |
| CCAGTACCGTCGCTCTCTCC+AGG | - | chr1.4:5374371-5374390 | MS.gene66497:intron | 65.0% | |
| CCTGGAGAGAGCGACGGTAC+TGG | + | chr1.4:5374374-5374393 | None:intergenic | 65.0% | |
| ! | TCTAGGCACTGCGGCCAAGG+TGG | - | chr1.4:5377417-5377436 | MS.gene66497:intron | 65.0% |
| !! | GGTTCTAGGCACTGCGGCCA+AGG | - | chr1.4:5377414-5377433 | MS.gene66497:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 5374283 | 5379796 | 5374283 | ID=MS.gene66497 |
| chr1.4 | mRNA | 5374283 | 5379796 | 5374283 | ID=MS.gene66497.t1;Parent=MS.gene66497 |
| chr1.4 | exon | 5379605 | 5379796 | 5379605 | ID=MS.gene66497.t1.exon1;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5379605 | 5379796 | 5379605 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5379390 | 5379515 | 5379390 | ID=MS.gene66497.t1.exon2;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5379390 | 5379515 | 5379390 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5378812 | 5378949 | 5378812 | ID=MS.gene66497.t1.exon3;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5378812 | 5378949 | 5378812 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5378609 | 5378704 | 5378609 | ID=MS.gene66497.t1.exon4;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5378609 | 5378704 | 5378609 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5377169 | 5377411 | 5377169 | ID=MS.gene66497.t1.exon5;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5377169 | 5377411 | 5377169 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5376845 | 5377079 | 5376845 | ID=MS.gene66497.t1.exon6;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5376845 | 5377079 | 5376845 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5376548 | 5376717 | 5376548 | ID=MS.gene66497.t1.exon7;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5376548 | 5376717 | 5376548 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5376188 | 5376265 | 5376188 | ID=MS.gene66497.t1.exon8;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5376188 | 5376265 | 5376188 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5376004 | 5376075 | 5376004 | ID=MS.gene66497.t1.exon9;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5376004 | 5376075 | 5376004 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5375821 | 5375925 | 5375821 | ID=MS.gene66497.t1.exon10;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5375821 | 5375925 | 5375821 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5375551 | 5375643 | 5375551 | ID=MS.gene66497.t1.exon11;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5375551 | 5375643 | 5375551 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5375384 | 5375476 | 5375384 | ID=MS.gene66497.t1.exon12;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5375384 | 5375476 | 5375384 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5374661 | 5374784 | 5374661 | ID=MS.gene66497.t1.exon13;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5374661 | 5374784 | 5374661 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| chr1.4 | exon | 5374283 | 5374296 | 5374283 | ID=MS.gene66497.t1.exon14;Parent=MS.gene66497.t1 |
| chr1.4 | CDS | 5374283 | 5374296 | 5374283 | ID=cds.MS.gene66497.t1;Parent=MS.gene66497.t1 |
| Gene Sequence |
| Protein sequence |
