Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56417.t1 | XP_024638813.1 | 97.4 | 579 | 15 | 0 | 1 | 579 | 1 | 579 | 4.50E-307 | 1063.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56417.t1 | Q56XV8 | 70.8 | 572 | 162 | 3 | 11 | 577 | 1 | 572 | 6.0e-220 | 765.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56417.t1 | G7JJX9 | 97.4 | 579 | 15 | 0 | 1 | 579 | 1 | 579 | 3.2e-307 | 1063.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56417 | MS.gene66497 | PPI |
| MS.gene56417 | MS.gene66498 | PPI |
| MS.gene37341 | MS.gene56417 | PPI |
| MS.gene66498 | MS.gene56417 | PPI |
| MS.gene56417 | MS.gene24509 | PPI |
| MS.gene56417 | MS.gene050099 | PPI |
| MS.gene56417 | MS.gene045864 | PPI |
| MS.gene56417 | MS.gene21357 | PPI |
| MS.gene56417 | MS.gene011205 | PPI |
| MS.gene56417 | MS.gene21355 | PPI |
| MS.gene56417 | MS.gene005698 | PPI |
| MS.gene56417 | MS.gene24508 | PPI |
| MS.gene56417 | MS.gene00537 | PPI |
| MS.gene78778 | MS.gene56417 | PPI |
| MS.gene56417 | MS.gene00538 | PPI |
| MS.gene56417 | MS.gene21583 | PPI |
| MS.gene56417 | MS.gene051662 | PPI |
| MS.gene56417 | MS.gene21581 | PPI |
| MS.gene005697 | MS.gene56417 | PPI |
| MS.gene56417 | MS.gene051663 | PPI |
| MS.gene051663 | MS.gene56417 | PPI |
| MS.gene07775 | MS.gene56417 | PPI |
| MS.gene56417 | MS.gene053971 | PPI |
| MS.gene56417 | MS.gene071148 | PPI |
| MS.gene007699 | MS.gene56417 | PPI |
| MS.gene56417 | MS.gene08674 | PPI |
| MS.gene08738 | MS.gene56417 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56417.t1 | MTR_4g084130 | 97.409 | 579 | 15 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1139 |
| MS.gene56417.t1 | MTR_4g084130 | 98.069 | 466 | 9 | 0 | 114 | 579 | 2 | 467 | 0.0 | 918 |
| MS.gene56417.t1 | MTR_4g057970 | 63.009 | 565 | 201 | 2 | 6 | 570 | 19 | 575 | 0.0 | 710 |
| MS.gene56417.t1 | MTR_1g017380 | 47.482 | 556 | 283 | 7 | 18 | 568 | 25 | 576 | 1.63e-171 | 499 |
| MS.gene56417.t1 | MTR_1g017390 | 47.302 | 556 | 284 | 7 | 18 | 568 | 25 | 576 | 5.08e-171 | 498 |
| MS.gene56417.t1 | MTR_1g090140 | 40.000 | 570 | 329 | 6 | 18 | 577 | 3 | 569 | 1.91e-136 | 409 |
| MS.gene56417.t1 | MTR_1g090130 | 42.086 | 556 | 308 | 7 | 18 | 562 | 3 | 555 | 3.77e-136 | 408 |
| MS.gene56417.t1 | MTR_8g017080 | 38.806 | 536 | 321 | 4 | 42 | 572 | 36 | 569 | 8.57e-124 | 377 |
| MS.gene56417.t1 | MTR_0991s0010 | 48.077 | 156 | 75 | 4 | 18 | 169 | 25 | 178 | 9.46e-38 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56417.t1 | AT5G18820 | 70.804 | 572 | 162 | 3 | 11 | 577 | 1 | 572 | 0.0 | 785 |
| MS.gene56417.t1 | AT2G28000 | 63.501 | 537 | 195 | 1 | 27 | 562 | 33 | 569 | 0.0 | 686 |
| MS.gene56417.t1 | AT5G18820 | 73.333 | 465 | 123 | 1 | 114 | 577 | 2 | 466 | 0.0 | 669 |
| MS.gene56417.t1 | AT5G18820 | 69.175 | 412 | 123 | 2 | 11 | 418 | 1 | 412 | 0.0 | 536 |
| MS.gene56417.t1 | AT1G55490 | 47.321 | 560 | 285 | 9 | 19 | 573 | 35 | 589 | 7.87e-171 | 498 |
| MS.gene56417.t1 | AT1G55490 | 47.321 | 560 | 285 | 9 | 19 | 573 | 35 | 589 | 7.87e-171 | 498 |
| MS.gene56417.t1 | AT1G55490 | 47.321 | 560 | 285 | 9 | 19 | 573 | 35 | 589 | 7.87e-171 | 498 |
| MS.gene56417.t1 | AT1G55490 | 47.321 | 560 | 285 | 9 | 19 | 573 | 35 | 589 | 7.87e-171 | 498 |
| MS.gene56417.t1 | AT1G55490 | 47.321 | 560 | 285 | 9 | 19 | 573 | 35 | 589 | 7.87e-171 | 498 |
| MS.gene56417.t1 | AT5G56500 | 47.913 | 551 | 279 | 7 | 27 | 572 | 38 | 585 | 8.21e-170 | 495 |
| MS.gene56417.t1 | AT5G56500 | 47.913 | 551 | 279 | 7 | 27 | 572 | 38 | 585 | 8.21e-170 | 495 |
| MS.gene56417.t1 | AT3G13470 | 46.714 | 563 | 282 | 8 | 28 | 579 | 33 | 588 | 9.87e-170 | 495 |
| MS.gene56417.t1 | AT1G26230 | 42.370 | 557 | 308 | 10 | 33 | 579 | 30 | 583 | 3.34e-145 | 433 |
| MS.gene56417.t1 | AT1G26230 | 42.481 | 532 | 297 | 8 | 54 | 579 | 3 | 531 | 2.88e-141 | 421 |
| MS.gene56417.t1 | AT1G26230 | 42.667 | 525 | 292 | 8 | 61 | 579 | 2 | 523 | 7.28e-140 | 417 |
| MS.gene56417.t1 | AT3G23990 | 41.398 | 558 | 308 | 8 | 18 | 562 | 3 | 554 | 6.31e-135 | 405 |
| MS.gene56417.t1 | AT2G33210 | 41.635 | 526 | 301 | 5 | 40 | 562 | 33 | 555 | 9.55e-131 | 395 |
| MS.gene56417.t1 | AT1G26230 | 42.946 | 482 | 265 | 7 | 33 | 507 | 30 | 508 | 2.53e-127 | 385 |
| MS.gene56417.t1 | AT2G33210 | 41.255 | 526 | 298 | 6 | 40 | 562 | 33 | 550 | 2.71e-127 | 385 |
| MS.gene56417.t1 | AT3G13860 | 41.155 | 537 | 309 | 5 | 40 | 572 | 32 | 565 | 3.87e-125 | 380 |
| MS.gene56417.t1 | AT1G26230 | 43.373 | 415 | 225 | 7 | 33 | 440 | 30 | 441 | 1.06e-108 | 334 |
Find 126 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACCGAATGATATCTTCTT+AGG | 0.121291 | 4.4:+28790928 | None:intergenic |
| ATCTTCCATGGAGTTCTTTA+TGG | 0.165963 | 4.4:+28786494 | None:intergenic |
| GCTCGCGCTATGATTAAATT+TGG | 0.174489 | 4.4:-28789857 | MS.gene56417:CDS |
| TACCAGCACTGCAATTATTT+TGG | 0.200241 | 4.4:-28789879 | MS.gene56417:CDS |
| GGATTATCAGCAGTTGCTTT+TGG | 0.208042 | 4.4:-28789836 | MS.gene56417:CDS |
| AAATATAGTTGTTGCATTAC+TGG | 0.223714 | 4.4:+28788054 | None:intergenic |
| AATGTTATTCTTTCTGAATC+TGG | 0.232870 | 4.4:-28790135 | MS.gene56417:CDS |
| ATTCCCTTCTTCAGAGAAAT+AGG | 0.235778 | 4.4:+28789806 | None:intergenic |
| TCTAACTACTCAAGCTATAT+TGG | 0.244652 | 4.4:-28784903 | MS.gene56417:CDS |
| AGGAACAAGTCCCTCATTTA+TGG | 0.247557 | 4.4:+28786560 | None:intergenic |
| TGCCACATATGTCCACCTTT+TGG | 0.268341 | 4.4:-28786529 | MS.gene56417:CDS |
| GTTTGACAATGCTAAAGTTT+TGG | 0.318990 | 4.4:-28788908 | MS.gene56417:CDS |
| CAAAGAAATAGTTCCTTTGC+TGG | 0.343686 | 4.4:-28788860 | MS.gene56417:CDS |
| AATTGCATCGGAAAGCTCTA+TGG | 0.352982 | 4.4:+28790071 | None:intergenic |
| TGAATTTCAGCCTTAGTGTT+TGG | 0.363338 | 4.4:+28788025 | None:intergenic |
| ATAAATGAGGGACTTGTTCC+TGG | 0.377624 | 4.4:-28786558 | MS.gene56417:CDS |
| TTCTTTCCATCTCCGAGTCC+TGG | 0.378180 | 4.4:+28788715 | None:intergenic |
| ATATGATCCCTTCCTTCAAC+AGG | 0.380233 | 4.4:+28789734 | None:intergenic |
| AAACACTAAGGCTGAAATTC+AGG | 0.392021 | 4.4:-28788023 | MS.gene56417:CDS |
| CAAAGTGCAGTCTCCATTGC+TGG | 0.397455 | 4.4:-28784932 | MS.gene56417:CDS |
| GGAAAAGACAGTAAAAGATT+TGG | 0.397877 | 4.4:-28789783 | MS.gene56417:CDS |
| TCCTGGTTGGTGATGAAGTA+AGG | 0.397913 | 4.4:+28788946 | None:intergenic |
| ATAGAGAAGATTGGATTTGA+TGG | 0.411296 | 4.4:-28789554 | MS.gene56417:CDS |
| TGCAAGTAAAATGAATGATT+TGG | 0.415477 | 4.4:-28789912 | MS.gene56417:CDS |
| GAAGATCTAGATGAGCAAAT+TGG | 0.420249 | 4.4:-28786477 | MS.gene56417:CDS |
| GGATAGAAAGCTGAGGATTG+AGG | 0.422156 | 4.4:-28786607 | MS.gene56417:CDS |
| TCGGAGAAACCCACAATTTG+TGG | 0.428486 | 4.4:-28790962 | MS.gene56417:CDS |
| TGGCGGTATAGCCGTTATAA+AGG | 0.429730 | 4.4:-28787912 | MS.gene56417:intron |
| TTATTTCTGTACAGATTGAC+AGG | 0.431467 | 4.4:-28788981 | MS.gene56417:intron |
| ACTTACTGAAAATGAAGAAA+TGG | 0.435628 | 4.4:+28791068 | None:intergenic |
| ACCAGAGGTACACGTGGCTT+GGG | 0.437428 | 4.4:+28784863 | None:intergenic |
| GATTTGGGTCTTACACTTGA+AGG | 0.439787 | 4.4:-28788121 | MS.gene56417:CDS |
| GCAGCTAATGCTGGAGTTGA+TGG | 0.441043 | 4.4:-28785082 | MS.gene56417:CDS |
| TACCGAATGATATCTTCTTA+GGG | 0.441126 | 4.4:+28790929 | None:intergenic |
| AAGAGAAGTATTCCTGTTGA+AGG | 0.446858 | 4.4:-28789746 | MS.gene56417:CDS |
| GCTGAAGCTATAGAGAAGAT+TGG | 0.448331 | 4.4:-28789563 | MS.gene56417:CDS |
| CTTGCTCGCACCACAAATTG+TGG | 0.452237 | 4.4:+28790952 | None:intergenic |
| TATCATTCGGTAAAGAATGC+AGG | 0.460046 | 4.4:-28790918 | MS.gene56417:CDS |
| AAATCAATTGCAGCTAATGC+TGG | 0.460888 | 4.4:-28785091 | MS.gene56417:CDS |
| TCCATGGAGTTCTTTATGGC+AGG | 0.461420 | 4.4:+28786498 | None:intergenic |
| GACCAGAGGTACACGTGGCT+TGG | 0.462563 | 4.4:+28784862 | None:intergenic |
| ACCTCTGTGGTAATTGAAGA+AGG | 0.463210 | 4.4:-28789497 | MS.gene56417:CDS |
| AAATCCTATTTCTCTGAAGA+AGG | 0.464428 | 4.4:-28789810 | MS.gene56417:CDS |
| TGAATTAGATACCTTTATAA+CGG | 0.468547 | 4.4:+28787901 | None:intergenic |
| ACCCAAGCCACGTGTACCTC+TGG | 0.480505 | 4.4:-28784864 | MS.gene56417:CDS |
| GCAGGGATAATTTACAAGTC+GGG | 0.480843 | 4.4:-28790900 | MS.gene56417:CDS |
| CAAGATCTTGCGCTCATGAC+GGG | 0.481455 | 4.4:-28788682 | MS.gene56417:intron |
| AGCCAAAATAATTGCAGTGC+TGG | 0.482530 | 4.4:+28789877 | None:intergenic |
| TAGAGAAGATTGGATTTGAT+GGG | 0.484021 | 4.4:-28789553 | MS.gene56417:CDS |
| TTAGCTGCAATTGATTTAGC+AGG | 0.491114 | 4.4:+28785097 | None:intergenic |
| ATCGGATACAATGCCATGAC+TGG | 0.491599 | 4.4:-28785019 | MS.gene56417:CDS |
| AGAACATTTGACTGGAGAAT+CGG | 0.495354 | 4.4:-28785037 | MS.gene56417:CDS |
| TTGCTCGCACCACAAATTGT+GGG | 0.499235 | 4.4:+28790953 | None:intergenic |
| GAGAGAATTGCGAAACTCAC+TGG | 0.501133 | 4.4:-28787932 | MS.gene56417:CDS |
| GCTGTAGCCTCGATTTCTGC+TGG | 0.501335 | 4.4:-28789614 | MS.gene56417:CDS |
| TCTCTGAGAGCTTTCTCGAA+TGG | 0.502708 | 4.4:+28787951 | None:intergenic |
| TTGCTCATCTAGATCTTCCA+TGG | 0.508453 | 4.4:+28786482 | None:intergenic |
| TGCAGTCTCCATTGCTGGCG+TGG | 0.511163 | 4.4:-28784927 | MS.gene56417:CDS |
| CTTTCATTGCAGTACCAAGC+TGG | 0.512828 | 4.4:+28788086 | None:intergenic |
| AGCCCTAAGAAGATATCATT+CGG | 0.514048 | 4.4:-28790931 | MS.gene56417:CDS |
| TCCGATGCAATTGAGAATGC+TGG | 0.522424 | 4.4:-28790060 | MS.gene56417:CDS |
| GAGGGACTTGTTCCTGGAGG+GGG | 0.523820 | 4.4:-28786552 | MS.gene56417:CDS |
| GATGCTGTCTCTCTTACCGT+TGG | 0.529324 | 4.4:-28790862 | MS.gene56417:CDS |
| ATGAGGGACTTGTTCCTGGA+GGG | 0.540906 | 4.4:-28786554 | MS.gene56417:CDS |
| GAAATGGAAGAGAATCGATT+GGG | 0.541457 | 4.4:+28791084 | None:intergenic |
| GCACATCTTGCAACTCGACT+AGG | 0.544259 | 4.4:+28784959 | None:intergenic |
| AAATGTCCAGGACTCGGAGA+TGG | 0.545018 | 4.4:-28788721 | MS.gene56417:CDS |
| AGAAATGGAAGAGAATCGAT+TGG | 0.545606 | 4.4:+28791083 | None:intergenic |
| GAAGTATTCCTGTTGAAGGA+AGG | 0.546321 | 4.4:-28789742 | MS.gene56417:CDS |
| AGTTAGAACCACGCCAGCAA+TGG | 0.548761 | 4.4:+28784919 | None:intergenic |
| TGCTCCGCTCTTAATTATTG+CGG | 0.552174 | 4.4:-28788818 | MS.gene56417:CDS |
| GCTGTAAAATGTCCAGGACT+CGG | 0.553014 | 4.4:-28788727 | MS.gene56417:CDS |
| GTGTTAACCTTTGGGTCCAA+CGG | 0.553155 | 4.4:+28790846 | None:intergenic |
| GGACGTCACTGCACAAGTGT+TGG | 0.553988 | 4.4:-28788794 | MS.gene56417:CDS |
| CCACGTGTACCTCTGGTCCC+TGG | 0.554763 | 4.4:-28784857 | MS.gene56417:CDS |
| CACAGAGGTTTCAGATGATG+AGG | 0.555060 | 4.4:+28789511 | None:intergenic |
| TGCAGGGATAATTTACAAGT+CGG | 0.555799 | 4.4:-28790901 | MS.gene56417:CDS |
| TGGCAGGTATCAAGTCCAAA+AGG | 0.555888 | 4.4:+28786514 | None:intergenic |
| GTTGCAGCTGTAAAATGTCC+AGG | 0.557223 | 4.4:-28788733 | MS.gene56417:CDS |
| GGTAATTGAAGAAGGGATGA+AGG | 0.557464 | 4.4:-28789489 | MS.gene56417:intron |
| AGAAGACTAGAACATTTGAC+TGG | 0.559546 | 4.4:-28785045 | MS.gene56417:CDS |
| TATTTCTCTGAAGAAGGGAA+TGG | 0.563382 | 4.4:-28789804 | MS.gene56417:CDS |
| GTCCAAAAGGTGGACATATG+TGG | 0.568776 | 4.4:+28786527 | None:intergenic |
| ATTTGCTGATCCAAACACTA+AGG | 0.569532 | 4.4:-28788035 | MS.gene56417:CDS |
| TCTCTTACCGTTGGACCCAA+AGG | 0.570187 | 4.4:-28790853 | MS.gene56417:intron |
| AAGTATTCCTGTTGAAGGAA+GGG | 0.570813 | 4.4:-28789741 | MS.gene56417:CDS |
| TGGAAGAGAATCGATTGGGA+GGG | 0.573087 | 4.4:+28791088 | None:intergenic |
| ATCTTCATATGTGCCAGTCA+TGG | 0.575331 | 4.4:+28785006 | None:intergenic |
| ACCAGCATTCTCAATTGCAT+CGG | 0.575986 | 4.4:+28790059 | None:intergenic |
| ATCATTCGGTAAAGAATGCA+GGG | 0.577354 | 4.4:-28790917 | MS.gene56417:CDS |
| AGTAAAATGAATGATTTGGC+TGG | 0.577859 | 4.4:-28789908 | MS.gene56417:CDS |
| ATGGAAGAGAATCGATTGGG+AGG | 0.578118 | 4.4:+28791087 | None:intergenic |
| ACAAGATCTTGCGCTCATGA+CGG | 0.582124 | 4.4:-28788683 | MS.gene56417:CDS |
| AATCCTATTTCTCTGAAGAA+GGG | 0.583638 | 4.4:-28789809 | MS.gene56417:CDS |
| ATGAATGATTTGGCTGGTGA+TGG | 0.584689 | 4.4:-28789902 | MS.gene56417:CDS |
| GTCGACCTCTTGAATTAGCA+TGG | 0.586694 | 4.4:+28790035 | None:intergenic |
| ACCTGCCATAAAGAACTCCA+TGG | 0.595150 | 4.4:-28786499 | MS.gene56417:CDS |
| CCTCTGTGGTAATTGAAGAA+GGG | 0.595263 | 4.4:-28789496 | MS.gene56417:CDS |
| AAACTTAAAGTAATAAATGA+CGG | 0.601769 | 4.4:-28790111 | MS.gene56417:CDS |
| TGAGGGACTTGTTCCTGGAG+GGG | 0.606887 | 4.4:-28786553 | MS.gene56417:CDS |
| GAAGGAAGGGATCATATCAA+AGG | 0.607458 | 4.4:-28789728 | MS.gene56417:intron |
| TCCGCTCTTAATTATTGCGG+AGG | 0.608855 | 4.4:-28788815 | MS.gene56417:CDS |
| TCCTTACTTCATCACCAACC+AGG | 0.611481 | 4.4:-28788947 | MS.gene56417:CDS |
| TGGTGCTGATATTGTGGCGA+AGG | 0.622265 | 4.4:-28786457 | MS.gene56417:intron |
| TTAATAGTGAACAAAATGCA+AGG | 0.624427 | 4.4:-28788766 | MS.gene56417:CDS |
| ACACACTGAGCTAGAACTTG+AGG | 0.625418 | 4.4:-28786628 | MS.gene56417:CDS |
| AGAGAAGATTGGATTTGATG+GGG | 0.625525 | 4.4:-28789552 | MS.gene56417:CDS |
| AGCATTGTCAAACTCCACAA+TGG | 0.627191 | 4.4:+28788918 | None:intergenic |
| GCAAATTGGTGCTGATATTG+TGG | 0.629535 | 4.4:-28786463 | MS.gene56417:CDS |
| TATTTCTGTACAGATTGACA+GGG | 0.629984 | 4.4:-28788980 | MS.gene56417:intron |
| GTCATTTCCAGCAGAAATCG+AGG | 0.631622 | 4.4:+28789607 | None:intergenic |
| TGGTGCCATGCTAATTCAAG+AGG | 0.633716 | 4.4:-28790040 | MS.gene56417:intron |
| GCTGGAAATGACGAGTATGT+TGG | 0.642275 | 4.4:-28789596 | MS.gene56417:CDS |
| GGTACAACATCAGACCAGCT+TGG | 0.642489 | 4.4:-28788100 | MS.gene56417:CDS |
| AAGAAGAAGAGAGATGTGTG+AGG | 0.643412 | 4.4:+28791111 | None:intergenic |
| CCCTTCTTCAATTACCACAG+AGG | 0.655595 | 4.4:+28789496 | None:intergenic |
| CTCATCATCTGAAACCTCTG+TGG | 0.670644 | 4.4:-28789510 | MS.gene56417:CDS |
| AGATGATGAGGATGACTCGA+TGG | 0.671433 | 4.4:+28789523 | None:intergenic |
| CAGGTATCAAGTCCAAAAGG+TGG | 0.673351 | 4.4:+28786517 | None:intergenic |
| GGAGTTATACCAGGGACCAG+AGG | 0.684313 | 4.4:+28784848 | None:intergenic |
| ATTTCTGTACAGATTGACAG+GGG | 0.693379 | 4.4:-28788979 | MS.gene56417:intron |
| TCCTCCGCAATAATTAAGAG+CGG | 0.695220 | 4.4:+28788814 | None:intergenic |
| CCAGGGACCAGAGGTACACG+TGG | 0.705754 | 4.4:+28784857 | None:intergenic |
| AATGAGGGACTTGTTCCTGG+AGG | 0.707403 | 4.4:-28786555 | MS.gene56417:CDS |
| AACTTGAGGATAGAAAGCTG+AGG | 0.724054 | 4.4:-28786614 | MS.gene56417:CDS |
| AGAATTGCGAAACTCACTGG+CGG | 0.733428 | 4.4:-28787929 | MS.gene56417:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTGCTATATTTATA+GGG | + | chr4.4:28786551-28786570 | None:intergenic | 10.0% |
| !! | AACATAATATGAATATATAA+AGG | - | chr4.4:28786668-28786687 | MS.gene56417:intron | 10.0% |
| !! | AACTATTATTAGAATTATTA+GGG | + | chr4.4:28786894-28786913 | None:intergenic | 10.0% |
| !! | ATTTATGATGATAATAATTA+GGG | - | chr4.4:28786508-28786527 | MS.gene56417:CDS | 10.0% |
| !! | TAAAAAATTGCTATATTTAT+AGG | + | chr4.4:28786552-28786571 | None:intergenic | 10.0% |
| !! | TATTTATGATGATAATAATT+AGG | - | chr4.4:28786507-28786526 | MS.gene56417:CDS | 10.0% |
| !!! | AACATTCTATTTTATTTTTT+AGG | - | chr4.4:28786819-28786838 | MS.gene56417:intron | 10.0% |
| !!! | AACATTTCATTTTATTTTTT+AGG | + | chr4.4:28786583-28786602 | None:intergenic | 10.0% |
| !!! | AATTATTTTAATAAAGTCTA+TGG | - | chr4.4:28787395-28787414 | MS.gene56417:intron | 10.0% |
| !!! | AATTTTTTTTGTTTTAGTTT+TGG | - | chr4.4:28786614-28786633 | MS.gene56417:CDS | 10.0% |
| !!! | ACAAAATAATTTTTTTTGTA+AGG | - | chr4.4:28786791-28786810 | MS.gene56417:intron | 10.0% |
| !!! | ACATTCTATTTTATTTTTTA+GGG | - | chr4.4:28786820-28786839 | MS.gene56417:intron | 10.0% |
| !!! | ACATTTCATTTTATTTTTTA+GGG | + | chr4.4:28786582-28786601 | None:intergenic | 10.0% |
| !!! | ATTTTATTAATTTTAGTTTC+TGG | - | chr4.4:28790700-28790719 | MS.gene56417:intron | 10.0% |
| !! | AAACTTAAAGTAATAAATGA+CGG | - | chr4.4:28785862-28785881 | MS.gene56417:intron | 15.0% |
| !! | AAATGTTAAATGAAAACAAA+AGG | + | chr4.4:28787475-28787494 | None:intergenic | 15.0% |
| !! | ATAAGTTATGATATAACAAT+AGG | - | chr4.4:28788934-28788953 | MS.gene56417:CDS | 15.0% |
| !! | CAAAATTTGGTATATTTATA+AGG | - | chr4.4:28786851-28786870 | MS.gene56417:intron | 15.0% |
| !! | GAACTATTATTAGAATTATT+AGG | + | chr4.4:28786895-28786914 | None:intergenic | 15.0% |
| !!! | AAACTATAACTACATATTTT+TGG | + | chr4.4:28790370-28790389 | None:intergenic | 15.0% |
| !!! | ACAATAATTTTTTTTGAAGA+AGG | + | chr4.4:28789758-28789777 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTACTTAACTGT+TGG | - | chr4.4:28788623-28788642 | MS.gene56417:intron | 15.0% |
| !!! | TTGAATTTTGTTGTTTTATA+TGG | - | chr4.4:28787647-28787666 | MS.gene56417:intron | 15.0% |
| !!! | TTTAGTAATTTATTTGCTTT+TGG | + | chr4.4:28789114-28789133 | None:intergenic | 15.0% |
| !!! | TTTCATTTAACATTTTTAGT+TGG | - | chr4.4:28787480-28787499 | MS.gene56417:intron | 15.0% |
| !! | AAAAAAGTTGTTTATCAAGA+GGG | + | chr4.4:28785285-28785304 | None:intergenic | 20.0% |
| !! | AAACATACCTCATTTATTTA+TGG | - | chr4.4:28789813-28789832 | MS.gene56417:CDS | 20.0% |
| !! | AAAGAAAAAATATTCAGACT+CGG | + | chr4.4:28789583-28789602 | None:intergenic | 20.0% |
| !! | AATTGAATAGAAGAAGAATT+AGG | + | chr4.4:28785155-28785174 | None:intergenic | 20.0% |
| !! | AGAAAAATGACACATTTATT+GGG | - | chr4.4:28790646-28790665 | MS.gene56417:intron | 20.0% |
| !! | AGTATTTCTTACTCTATTTA+AGG | - | chr4.4:28788168-28788187 | MS.gene56417:intron | 20.0% |
| !! | ATGTCAAAATTATATCCATT+AGG | + | chr4.4:28786642-28786661 | None:intergenic | 20.0% |
| !! | CTTTCTTATCTATTATTGTA+GGG | - | chr4.4:28788290-28788309 | MS.gene56417:intron | 20.0% |
| !! | TAAAGGTTGAACATAATAAA+CGG | - | chr4.4:28786685-28786704 | MS.gene56417:intron | 20.0% |
| !! | TCTTTCTTATCTATTATTGT+AGG | - | chr4.4:28788289-28788308 | MS.gene56417:intron | 20.0% |
| !! | TGAATTAGATACCTTTATAA+CGG | + | chr4.4:28788075-28788094 | None:intergenic | 20.0% |
| !! | TGTCAAAATTATATCCATTA+GGG | + | chr4.4:28786641-28786660 | None:intergenic | 20.0% |
| !! | TTAAATGGATGAAAATTTCA+AGG | - | chr4.4:28785986-28786005 | MS.gene56417:intron | 20.0% |
| !! | TTGTGAATGTGAAAAATAAA+TGG | + | chr4.4:28788821-28788840 | None:intergenic | 20.0% |
| !! | TTTCTTTCCATGAAAAAATT+GGG | - | chr4.4:28789660-28789679 | MS.gene56417:intron | 20.0% |
| !!! | AAAATCTAAAACTCAACTAT+AGG | - | chr4.4:28788459-28788478 | MS.gene56417:intron | 20.0% |
| !!! | AATTTTTTCATGGAAAGAAA+AGG | + | chr4.4:28789660-28789679 | None:intergenic | 20.0% |
| !!! | AGATTTTATTAATTCAACCA+AGG | - | chr4.4:28788203-28788222 | MS.gene56417:intron | 20.0% |
| !!! | ATTTTCATCCATTTAATCTA+AGG | + | chr4.4:28785982-28786001 | None:intergenic | 20.0% |
| !!! | TAGAATTTTACAGATAAAGA+AGG | - | chr4.4:28787974-28787993 | MS.gene56417:CDS | 20.0% |
| !!! | TCAAACATATAATTGTTGTT+TGG | + | chr4.4:28785704-28785723 | None:intergenic | 20.0% |
| !!! | TTTATTTTTCACATTCACAA+TGG | - | chr4.4:28788821-28788840 | MS.gene56417:CDS | 20.0% |
| !!! | TTTTCTTTCCATGAAAAAAT+TGG | - | chr4.4:28789659-28789678 | MS.gene56417:intron | 20.0% |
| ! | AAAAAATATGTTGAGAATGC+AGG | - | chr4.4:28789069-28789088 | MS.gene56417:intron | 25.0% |
| ! | AAAGGTTGAACATAATAAAC+GGG | - | chr4.4:28786686-28786705 | MS.gene56417:intron | 25.0% |
| ! | AAATATAGTTGTTGCATTAC+TGG | + | chr4.4:28787922-28787941 | None:intergenic | 25.0% |
| ! | AAATTGTTGTGAAGAAACAA+TGG | - | chr4.4:28789219-28789238 | MS.gene56417:intron | 25.0% |
| ! | AATGTTATTCTTTCTGAATC+TGG | - | chr4.4:28785838-28785857 | MS.gene56417:intron | 25.0% |
| ! | ACAGTTGAAAAATGAGATAA+TGG | + | chr4.4:28787538-28787557 | None:intergenic | 25.0% |
| ! | ACATTCAGATGAACATAAAT+TGG | - | chr4.4:28786752-28786771 | MS.gene56417:intron | 25.0% |
| ! | ACCGTAAAAATTGAATCTTA+GGG | + | chr4.4:28789046-28789065 | None:intergenic | 25.0% |
| ! | ACTTACTGAAAATGAAGAAA+TGG | + | chr4.4:28784908-28784927 | None:intergenic | 25.0% |
| ! | AGAGATAAAATAAATGAGCA+CGG | + | chr4.4:28785803-28785822 | None:intergenic | 25.0% |
| ! | CAAAAAAGTTGTTTATCAAG+AGG | + | chr4.4:28785286-28785305 | None:intergenic | 25.0% |
| ! | CAAACTGAATTTATATTCCA+GGG | + | chr4.4:28790276-28790295 | None:intergenic | 25.0% |
| ! | CTAAAACAAAAAAAATTGCG+AGG | + | chr4.4:28786611-28786630 | None:intergenic | 25.0% |
| ! | GAGAAAAATGACACATTTAT+TGG | - | chr4.4:28790645-28790664 | MS.gene56417:intron | 25.0% |
| ! | GTGAAAAATAAATGGAATTG+AGG | + | chr4.4:28788813-28788832 | None:intergenic | 25.0% |
| ! | TACAATCAACAAGAAGAATA+AGG | + | chr4.4:28790132-28790151 | None:intergenic | 25.0% |
| ! | TAGGGACTAAAATCAAAATT+TGG | - | chr4.4:28786838-28786857 | MS.gene56417:intron | 25.0% |
| ! | TATAAGTTCTTTCAGATTGT+CGG | - | chr4.4:28785431-28785450 | MS.gene56417:intron | 25.0% |
| ! | TCTTAATGCAAACTTTAACA+TGG | + | chr4.4:28790451-28790470 | None:intergenic | 25.0% |
| ! | TGAACATAAATTGGTCATTA+AGG | - | chr4.4:28786761-28786780 | MS.gene56417:intron | 25.0% |
| ! | TGCAAGTAAAATGAATGATT+TGG | - | chr4.4:28786061-28786080 | MS.gene56417:intron | 25.0% |
| ! | TTAATAGTGAACAAAATGCA+AGG | - | chr4.4:28787207-28787226 | MS.gene56417:intron | 25.0% |
| ! | TTGAACGAAAATTGATCAAA+GGG | + | chr4.4:28785766-28785785 | None:intergenic | 25.0% |
| !! | AATTTCTTGCATTTTTGCTA+TGG | - | chr4.4:28785171-28785190 | MS.gene56417:intron | 25.0% |
| !! | ACCCTAAGATTCAATTTTTA+CGG | - | chr4.4:28789042-28789061 | MS.gene56417:intron | 25.0% |
| !! | GAAGTGTTTATTAGCTTATT+TGG | - | chr4.4:28788853-28788872 | MS.gene56417:CDS | 25.0% |
| !! | TATTTTATCTCTTATTACGC+AGG | - | chr4.4:28785811-28785830 | MS.gene56417:intron | 25.0% |
| !! | TGAAATTTGCATATTTTGCA+AGG | - | chr4.4:28789697-28789716 | MS.gene56417:intron | 25.0% |
| !!! | TGCAAAACATTTGCTTTTTT+TGG | - | chr4.4:28788381-28788400 | MS.gene56417:intron | 25.0% |
| !!! | TGCATTTAAGATTTTAACCA+TGG | - | chr4.4:28789882-28789901 | MS.gene56417:CDS | 25.0% |
| !!! | TTCATAAGTTATTTTCAGCT+TGG | + | chr4.4:28785393-28785412 | None:intergenic | 25.0% |
| !!! | TTTTTATTTTTCCTGCTTGT+AGG | - | chr4.4:28786037-28786056 | MS.gene56417:intron | 25.0% |
| AAAAAACACAATGAGCTACT+TGG | + | chr4.4:28788735-28788754 | None:intergenic | 30.0% | |
| AAAATACTAACGCTTGAGTA+GGG | - | chr4.4:28790012-28790031 | MS.gene56417:intron | 30.0% | |
| AAAATGTAAGCCTAGTATGA+AGG | + | chr4.4:28787365-28787384 | None:intergenic | 30.0% | |
| AAAATTGAATCTTAGGGTGA+TGG | + | chr4.4:28789040-28789059 | None:intergenic | 30.0% | |
| AAATTGAATCTTAGGGTGAT+GGG | + | chr4.4:28789039-28789058 | None:intergenic | 30.0% | |
| AACAGACAACAGCTATAATA+GGG | + | chr4.4:28786974-28786993 | None:intergenic | 30.0% | |
| AAGCAAGTCATTGTGTTAAA+TGG | - | chr4.4:28788772-28788791 | MS.gene56417:CDS | 30.0% | |
| AATAGGGTGAAAACAGTTTA+TGG | + | chr4.4:28785581-28785600 | None:intergenic | 30.0% | |
| AATGCATGAAGCAATGATAT+AGG | - | chr4.4:28790519-28790538 | MS.gene56417:intron | 30.0% | |
| AATTGAATCCCTATACTGTA+TGG | - | chr4.4:28785740-28785759 | MS.gene56417:intron | 30.0% | |
| AGAAAAGGCAACATAATACA+TGG | + | chr4.4:28789645-28789664 | None:intergenic | 30.0% | |
| AGGTTCTACCTTAGATTAAA+TGG | - | chr4.4:28785971-28785990 | MS.gene56417:intron | 30.0% | |
| AGTCAAAATGTAAGAAACCA+TGG | + | chr4.4:28789902-28789921 | None:intergenic | 30.0% | |
| ATAGAGAAGATTGGATTTGA+TGG | - | chr4.4:28786419-28786438 | MS.gene56417:intron | 30.0% | |
| ATAGCCTATACAAGAATCAA+GGG | + | chr4.4:28788704-28788723 | None:intergenic | 30.0% | |
| ATTGAGACTAACTTTGTGAA+AGG | - | chr4.4:28790773-28790792 | MS.gene56417:intron | 30.0% | |
| CACCGTAAAAATTGAATCTT+AGG | + | chr4.4:28789047-28789066 | None:intergenic | 30.0% | |
| CATACCTCATTTATTTATGG+TGG | - | chr4.4:28789816-28789835 | MS.gene56417:CDS | 30.0% | |
| CCAAACTGAATTTATATTCC+AGG | + | chr4.4:28790277-28790296 | None:intergenic | 30.0% | |
| CCTGGAATATAAATTCAGTT+TGG | - | chr4.4:28790274-28790293 | MS.gene56417:intron | 30.0% | |
| CTATAATAGGGAAAAACACA+GGG | + | chr4.4:28786962-28786981 | None:intergenic | 30.0% | |
| CTGCAAAATAAGCAACTATT+TGG | + | chr4.4:28787427-28787446 | None:intergenic | 30.0% | |
| GATAGTAGAAAATTCACTAG+AGG | + | chr4.4:28789618-28789637 | None:intergenic | 30.0% | |
| GCATATAGCACTTATATGAT+AGG | - | chr4.4:28785644-28785663 | MS.gene56417:intron | 30.0% | |
| GGAAAAGACAGTAAAAGATT+TGG | - | chr4.4:28786190-28786209 | MS.gene56417:intron | 30.0% | |
| GGTATGAATCAGTTGAATTT+CGG | + | chr4.4:28790255-28790274 | None:intergenic | 30.0% | |
| GTTGAACGAAAATTGATCAA+AGG | + | chr4.4:28785767-28785786 | None:intergenic | 30.0% | |
| TAACAGACAACAGCTATAAT+AGG | + | chr4.4:28786975-28786994 | None:intergenic | 30.0% | |
| TACCGAATGATATCTTCTTA+GGG | + | chr4.4:28785047-28785066 | None:intergenic | 30.0% | |
| TAGAGAAGATTGGATTTGAT+GGG | - | chr4.4:28786420-28786439 | MS.gene56417:intron | 30.0% | |
| TAGCTTATAGAAACAGCTTA+TGG | + | chr4.4:28785351-28785370 | None:intergenic | 30.0% | |
| TCCAACAAAACCAATAACAA+AGG | + | chr4.4:28788649-28788668 | None:intergenic | 30.0% | |
| TCTAACTACTCAAGCTATAT+TGG | - | chr4.4:28791070-28791089 | MS.gene56417:intron | 30.0% | |
| TGCAATCAAGACATTTGAAA+AGG | + | chr4.4:28789200-28789219 | None:intergenic | 30.0% | |
| TGTTCCACCATAAATAAATG+AGG | + | chr4.4:28789823-28789842 | None:intergenic | 30.0% | |
| TTACCGAATGATATCTTCTT+AGG | + | chr4.4:28785048-28785067 | None:intergenic | 30.0% | |
| TTAGTCATTTGACTAGCAAT+GGG | + | chr4.4:28788244-28788263 | None:intergenic | 30.0% | |
| TTATAGTTTGATCCATTTCC+TGG | - | chr4.4:28790381-28790400 | MS.gene56417:intron | 30.0% | |
| TTGACTGTACTTCATTGAAT+GGG | - | chr4.4:28789916-28789935 | MS.gene56417:CDS | 30.0% | |
| TTTAGTCATTTGACTAGCAA+TGG | + | chr4.4:28788245-28788264 | None:intergenic | 30.0% | |
| TTTATATGGTGTAACTGTGT+GGG | - | chr4.4:28787661-28787680 | MS.gene56417:intron | 30.0% | |
| TTTGACTGTACTTCATTGAA+TGG | - | chr4.4:28789915-28789934 | MS.gene56417:CDS | 30.0% | |
| ! | AAAAGCAAATGTTTTGCATG+TGG | + | chr4.4:28788379-28788398 | None:intergenic | 30.0% |
| ! | AAAAGTTCTTTTGCACTAGA+TGG | + | chr4.4:28788565-28788584 | None:intergenic | 30.0% |
| ! | AAATCCTATTTCTCTGAAGA+AGG | - | chr4.4:28786163-28786182 | MS.gene56417:intron | 30.0% |
| ! | AATCCTATTTCTCTGAAGAA+GGG | - | chr4.4:28786164-28786183 | MS.gene56417:intron | 30.0% |
| ! | AGGCTTACATTTTTCTATCT+TGG | - | chr4.4:28787372-28787391 | MS.gene56417:intron | 30.0% |
| ! | AGTAAAATGAATGATTTGGC+TGG | - | chr4.4:28786065-28786084 | MS.gene56417:intron | 30.0% |
| ! | ATTTTTCACATTCACAATGG+AGG | - | chr4.4:28788824-28788843 | MS.gene56417:CDS | 30.0% |
| ! | GTTTGACAATGCTAAAGTTT+TGG | - | chr4.4:28787065-28787084 | MS.gene56417:intron | 30.0% |
| ! | TAGTTTTCATAAGCCATCTT+GGG | + | chr4.4:28788991-28789010 | None:intergenic | 30.0% |
| ! | TATGAAGATCTTTTGAATGC+TGG | - | chr4.4:28790981-28791000 | MS.gene56417:intron | 30.0% |
| ! | TATTTCTGTACAGATTGACA+GGG | - | chr4.4:28786993-28787012 | MS.gene56417:intron | 30.0% |
| ! | TTTTATATGGTGTAACTGTG+TGG | - | chr4.4:28787660-28787679 | MS.gene56417:intron | 30.0% |
| !! | AAGAAGCAGTTGATAAGTAA+AGG | + | chr4.4:28788147-28788166 | None:intergenic | 30.0% |
| !! | AATTAGGAAGTGTTAACCTT+TGG | + | chr4.4:28785139-28785158 | None:intergenic | 30.0% |
| !! | AGAAGCAGTTGATAAGTAAA+GGG | + | chr4.4:28788146-28788165 | None:intergenic | 30.0% |
| !! | ATTAGGAAGTGTTAACCTTT+GGG | + | chr4.4:28785138-28785157 | None:intergenic | 30.0% |
| !! | CAATGCTAAAGTTTTGGTAA+CGG | - | chr4.4:28787071-28787090 | MS.gene56417:intron | 30.0% |
| !! | GTCTTACTTTGCTATTTCTT+TGG | - | chr4.4:28789938-28789957 | MS.gene56417:intron | 30.0% |
| !! | TTATTTCTGTACAGATTGAC+AGG | - | chr4.4:28786992-28787011 | MS.gene56417:intron | 30.0% |
| !!! | AAACTCTCCCAATTTTTTCA+TGG | + | chr4.4:28789670-28789689 | None:intergenic | 30.0% |
| !!! | ACATTTTTAGTTGGACAGTA+TGG | - | chr4.4:28787489-28787508 | MS.gene56417:intron | 30.0% |
| !!! | CACAATGACTTGCTTATTTT+AGG | + | chr4.4:28788767-28788786 | None:intergenic | 30.0% |
| !!! | TTGTTATTGGTTTTGTTGGA+TGG | - | chr4.4:28788649-28788668 | MS.gene56417:intron | 30.0% |
| !!! | TTTGCTATGGTTTGTTTTAC+TGG | - | chr4.4:28785184-28785203 | MS.gene56417:intron | 30.0% |
| AAAAATATTCAGACTCGGAG+AGG | + | chr4.4:28789578-28789597 | None:intergenic | 35.0% | |
| AAAATATTCAGACTCGGAGA+GGG | + | chr4.4:28789577-28789596 | None:intergenic | 35.0% | |
| AAACAACTGCAGATATGTTG+AGG | + | chr4.4:28790052-28790071 | None:intergenic | 35.0% | |
| AAACACTAAGGCTGAAATTC+AGG | - | chr4.4:28787950-28787969 | MS.gene56417:CDS | 35.0% | |
| AAATACTAACGCTTGAGTAG+GGG | - | chr4.4:28790013-28790032 | MS.gene56417:intron | 35.0% | |
| AAATCAATTGCAGCTAATGC+TGG | - | chr4.4:28790882-28790901 | MS.gene56417:CDS | 35.0% | |
| AAGTATTCCTGTTGAAGGAA+GGG | - | chr4.4:28786232-28786251 | MS.gene56417:intron | 35.0% | |
| AATAGTCAGACCAAAATGGA+CGG | + | chr4.4:28784972-28784991 | None:intergenic | 35.0% | |
| ACATTCACAATGGAGGAATT+TGG | - | chr4.4:28788831-28788850 | MS.gene56417:CDS | 35.0% | |
| AGAAACCACTGAACTATCTA+CGG | - | chr4.4:28790424-28790443 | MS.gene56417:intron | 35.0% | |
| AGAAATGGAAGAGAATCGAT+TGG | + | chr4.4:28784893-28784912 | None:intergenic | 35.0% | |
| AGAACATTTGACTGGAGAAT+CGG | - | chr4.4:28790936-28790955 | MS.gene56417:CDS | 35.0% | |
| AGAAGACTAGAACATTTGAC+TGG | - | chr4.4:28790928-28790947 | MS.gene56417:CDS | 35.0% | |
| AGAGAAGATTGGATTTGATG+GGG | - | chr4.4:28786421-28786440 | MS.gene56417:intron | 35.0% | |
| AGCCCTAAGAAGATATCATT+CGG | - | chr4.4:28785042-28785061 | MS.gene56417:CDS | 35.0% | |
| AGTCTCAATCCTACAAGAAA+AGG | + | chr4.4:28790762-28790781 | None:intergenic | 35.0% | |
| ATATGATTCGTTGCAAGACA+TGG | + | chr4.4:28787733-28787752 | None:intergenic | 35.0% | |
| ATCATTCGGTAAAGAATGCA+GGG | - | chr4.4:28785056-28785075 | MS.gene56417:CDS | 35.0% | |
| ATCTTCCATGGAGTTCTTTA+TGG | + | chr4.4:28789482-28789501 | None:intergenic | 35.0% | |
| ATGTCTTGCAACGAATCATA+TGG | - | chr4.4:28787732-28787751 | MS.gene56417:intron | 35.0% | |
| ATTCCCTTCTTCAGAGAAAT+AGG | + | chr4.4:28786170-28786189 | None:intergenic | 35.0% | |
| ATTGGGCTGAGATATTTGTT+AGG | - | chr4.4:28790663-28790682 | MS.gene56417:intron | 35.0% | |
| ATTTAATAAACCCCCCAAGA+TGG | - | chr4.4:28788975-28788994 | MS.gene56417:intron | 35.0% | |
| ATTTCTGTACAGATTGACAG+GGG | - | chr4.4:28786994-28787013 | MS.gene56417:intron | 35.0% | |
| CAAACATGTTGTAAGAGTCT+GGG | + | chr4.4:28785475-28785494 | None:intergenic | 35.0% | |
| CAAAGAAATAGTTCCTTTGC+TGG | - | chr4.4:28787113-28787132 | MS.gene56417:intron | 35.0% | |
| CATAATAAACGGGCATAACA+TGG | - | chr4.4:28786696-28786715 | MS.gene56417:intron | 35.0% | |
| CATAGCCTATACAAGAATCA+AGG | + | chr4.4:28788705-28788724 | None:intergenic | 35.0% | |
| CATTTACCAATTGTGTAGGT+AGG | - | chr4.4:28789319-28789338 | MS.gene56417:intron | 35.0% | |
| CCTACTGCATTTGATAAACT+CGG | - | chr4.4:28787320-28787339 | MS.gene56417:intron | 35.0% | |
| CCTGTGATATTAAAGTCAAC+AGG | + | chr4.4:28787813-28787832 | None:intergenic | 35.0% | |
| GAAAATACTAACGCTTGAGT+AGG | - | chr4.4:28790011-28790030 | MS.gene56417:intron | 35.0% | |
| GAAATGGAAGAGAATCGATT+GGG | + | chr4.4:28784892-28784911 | None:intergenic | 35.0% | |
| GAAGATCTAGATGAGCAAAT+TGG | - | chr4.4:28789496-28789515 | MS.gene56417:CDS | 35.0% | |
| GATGCATTTACCAATTGTGT+AGG | - | chr4.4:28789315-28789334 | MS.gene56417:intron | 35.0% | |
| GCTATAATAGGGAAAAACAC+AGG | + | chr4.4:28786963-28786982 | None:intergenic | 35.0% | |
| GGGTCAAAATGATCAGAATA+AGG | + | chr4.4:28788126-28788145 | None:intergenic | 35.0% | |
| GGTAAGTGTTTGTTTGGATT+AGG | + | chr4.4:28785264-28785283 | None:intergenic | 35.0% | |
| GTATCCCTTGATTCTTGTAT+AGG | - | chr4.4:28788697-28788716 | MS.gene56417:CDS | 35.0% | |
| GTCATTGTGTTAAATGGAAC+TGG | - | chr4.4:28788778-28788797 | MS.gene56417:CDS | 35.0% | |
| GTGATATTAAAGTCAACAGG+AGG | + | chr4.4:28787810-28787829 | None:intergenic | 35.0% | |
| GTGTGAATCTATTCTATCGA+AGG | + | chr4.4:28790192-28790211 | None:intergenic | 35.0% | |
| TATCATTCGGTAAAGAATGC+AGG | - | chr4.4:28785055-28785074 | MS.gene56417:CDS | 35.0% | |
| TATGATTCGTTGCAAGACAT+GGG | + | chr4.4:28787732-28787751 | None:intergenic | 35.0% | |
| TCAATCCTACAAGAAAAGGA+GGG | + | chr4.4:28790758-28790777 | None:intergenic | 35.0% | |
| TGAAAAACTCAGACAAGCAT+TGG | + | chr4.4:28786284-28786303 | None:intergenic | 35.0% | |
| TGAATTTCAGCCTTAGTGTT+TGG | + | chr4.4:28787951-28787970 | None:intergenic | 35.0% | |
| TGACTTTAATATCACAGGTG+CGG | - | chr4.4:28787815-28787834 | MS.gene56417:intron | 35.0% | |
| TGCAGGGATAATTTACAAGT+CGG | - | chr4.4:28785072-28785091 | MS.gene56417:CDS | 35.0% | |
| TGCTTCATGCATTAAAACCA+CGG | + | chr4.4:28790512-28790531 | None:intergenic | 35.0% | |
| TTATATGGTGTAACTGTGTG+GGG | - | chr4.4:28787662-28787681 | MS.gene56417:intron | 35.0% | |
| TTATCTCTTATTACGCAGGA+CGG | - | chr4.4:28785815-28785834 | MS.gene56417:intron | 35.0% | |
| TTGTGTTAAATGGAACTGGA+TGG | - | chr4.4:28788782-28788801 | MS.gene56417:CDS | 35.0% | |
| ! | AATTCAACTGATTCATACCC+TGG | - | chr4.4:28790256-28790275 | MS.gene56417:intron | 35.0% |
| ! | ACTTTTGCTGCCATAAATGA+GGG | - | chr4.4:28789403-28789422 | MS.gene56417:intron | 35.0% |
| ! | AGTTTTCATAAGCCATCTTG+GGG | + | chr4.4:28788990-28789009 | None:intergenic | 35.0% |
| ! | ATTTGCTGATCCAAACACTA+AGG | - | chr4.4:28787938-28787957 | MS.gene56417:CDS | 35.0% |
| ! | GATTTTCTCTGTGGAGATTT+GGG | - | chr4.4:28787837-28787856 | MS.gene56417:intron | 35.0% |
| ! | GTAGTTTTCATAAGCCATCT+TGG | + | chr4.4:28788992-28789011 | None:intergenic | 35.0% |
| ! | GTGCAAAAGAACTTTTGTTG+TGG | - | chr4.4:28788569-28788588 | MS.gene56417:intron | 35.0% |
| ! | GTTCTGAGTTCAATGACATT+GGG | - | chr4.4:28788312-28788331 | MS.gene56417:intron | 35.0% |
| ! | TACCAGCACTGCAATTATTT+TGG | - | chr4.4:28786094-28786113 | MS.gene56417:intron | 35.0% |
| ! | TACTTTTGCTGCCATAAATG+AGG | - | chr4.4:28789402-28789421 | MS.gene56417:intron | 35.0% |
| ! | TATTTCTCTGAAGAAGGGAA+TGG | - | chr4.4:28786169-28786188 | MS.gene56417:intron | 35.0% |
| ! | TTAGCTGCAATTGATTTAGC+AGG | + | chr4.4:28790879-28790898 | None:intergenic | 35.0% |
| !! | AAGAGAAGTATTCCTGTTGA+AGG | - | chr4.4:28786227-28786246 | MS.gene56417:intron | 35.0% |
| !! | CCTGTTGACTTTAATATCAC+AGG | - | chr4.4:28787810-28787829 | MS.gene56417:intron | 35.0% |
| !! | GCTGTTTCTATAAGCTATCT+TGG | - | chr4.4:28785354-28785373 | MS.gene56417:intron | 35.0% |
| !! | TAACTGTTGGCCTTTGTTAT+TGG | - | chr4.4:28788636-28788655 | MS.gene56417:intron | 35.0% |
| !! | TGAATAGCTTTTTCCAGCAA+AGG | + | chr4.4:28787129-28787148 | None:intergenic | 35.0% |
| !! | TTAAAACCACGGTATTGACA+CGG | + | chr4.4:28790501-28790520 | None:intergenic | 35.0% |
| !!! | ATTATCAGCAGTTGCTTTTG+GGG | - | chr4.4:28786139-28786158 | MS.gene56417:intron | 35.0% |
| !!! | GATTATCAGCAGTTGCTTTT+GGG | - | chr4.4:28786138-28786157 | MS.gene56417:intron | 35.0% |
| !!! | GCCTTTGTTATTGGTTTTGT+TGG | - | chr4.4:28788645-28788664 | MS.gene56417:intron | 35.0% |
| !!! | GTGTCATTTTTCTCTCCTAA+GGG | + | chr4.4:28790639-28790658 | None:intergenic | 35.0% |
| !!! | GTTTTAGTTTTGGTCCCTAA+TGG | - | chr4.4:28786624-28786643 | MS.gene56417:CDS | 35.0% |
| !!! | TGTGTCATTTTTCTCTCCTA+AGG | + | chr4.4:28790640-28790659 | None:intergenic | 35.0% |
| AAATATTCAGACTCGGAGAG+GGG | + | chr4.4:28789576-28789595 | None:intergenic | 40.0% | |
| AACAAAGAGGGAACAGCTTA+TGG | + | chr4.4:28789015-28789034 | None:intergenic | 40.0% | |
| AACACATTTCCAGCTTTGCT+TGG | - | chr4.4:28787780-28787799 | MS.gene56417:intron | 40.0% | |
| AACTTGAGGATAGAAAGCTG+AGG | - | chr4.4:28789359-28789378 | MS.gene56417:intron | 40.0% | |
| AAGAAGAAGAGAGATGTGTG+AGG | + | chr4.4:28784865-28784884 | None:intergenic | 40.0% | |
| AAGGTAGAACCTAACAACCA+TGG | + | chr4.4:28785963-28785982 | None:intergenic | 40.0% | |
| AATTGCATCGGAAAGCTCTA+TGG | + | chr4.4:28785905-28785924 | None:intergenic | 40.0% | |
| ACAAAGAGGGAACAGCTTAT+GGG | + | chr4.4:28789014-28789033 | None:intergenic | 40.0% | |
| ACATACATGTCCTGTCATCA+TGG | - | chr4.4:28788095-28788114 | MS.gene56417:CDS | 40.0% | |
| ACCAGCATTCTCAATTGCAT+CGG | + | chr4.4:28785917-28785936 | None:intergenic | 40.0% | |
| ACCTCTGTGGTAATTGAAGA+AGG | - | chr4.4:28786476-28786495 | MS.gene56417:CDS | 40.0% | |
| AGCATTGTCAAACTCCACAA+TGG | + | chr4.4:28787058-28787077 | None:intergenic | 40.0% | |
| AGCCAAAATAATTGCAGTGC+TGG | + | chr4.4:28786099-28786118 | None:intergenic | 40.0% | |
| AGGAACAAGTCCCTCATTTA+TGG | + | chr4.4:28789416-28789435 | None:intergenic | 40.0% | |
| AGTTGTGCATGAATCATTGC+AGG | - | chr4.4:28790842-28790861 | MS.gene56417:intron | 40.0% | |
| AGTTTGATCCATTTCCTGGA+TGG | - | chr4.4:28790385-28790404 | MS.gene56417:intron | 40.0% | |
| ATATGATCCCTTCCTTCAAC+AGG | + | chr4.4:28786242-28786261 | None:intergenic | 40.0% | |
| ATCAAAGGGCCATACAGTAT+AGG | + | chr4.4:28785752-28785771 | None:intergenic | 40.0% | |
| ATCTTCATATGTGCCAGTCA+TGG | + | chr4.4:28790970-28790989 | None:intergenic | 40.0% | |
| CAACCAGGAAAAATCCATTG+TGG | - | chr4.4:28787041-28787060 | MS.gene56417:intron | 40.0% | |
| CAAGAGGGTAAGTGTTTGTT+TGG | + | chr4.4:28785270-28785289 | None:intergenic | 40.0% | |
| CAAGATTACAATCCACCTAG+CGG | - | chr4.4:28787572-28787591 | MS.gene56417:intron | 40.0% | |
| CAATCCTACAAGAAAAGGAG+GGG | + | chr4.4:28790757-28790776 | None:intergenic | 40.0% | |
| CATACATGTCCTGTCATCAT+GGG | - | chr4.4:28788096-28788115 | MS.gene56417:CDS | 40.0% | |
| CATGGGAACAAAGACATTTG+AGG | + | chr4.4:28787715-28787734 | None:intergenic | 40.0% | |
| CCAAACATGTTGTAAGAGTC+TGG | + | chr4.4:28785476-28785495 | None:intergenic | 40.0% | |
| CCAGACTCTTACAACATGTT+TGG | - | chr4.4:28785473-28785492 | MS.gene56417:intron | 40.0% | |
| CCGAGTTTATCAAATGCAGT+AGG | + | chr4.4:28787323-28787342 | None:intergenic | 40.0% | |
| CCTCTGTGGTAATTGAAGAA+GGG | - | chr4.4:28786477-28786496 | MS.gene56417:CDS | 40.0% | |
| CGTCAGTTGACTGTTAATAG+AGG | - | chr4.4:28787607-28787626 | MS.gene56417:intron | 40.0% | |
| CTCAATCCTACAAGAAAAGG+AGG | + | chr4.4:28790759-28790778 | None:intergenic | 40.0% | |
| CTCTTAAACACTCTCACAAG+TGG | + | chr4.4:28785531-28785550 | None:intergenic | 40.0% | |
| CTTATTCCCTAAAGTAGCAG+GGG | + | chr4.4:28790109-28790128 | None:intergenic | 40.0% | |
| GAAGGAAGGGATCATATCAA+AGG | - | chr4.4:28786245-28786264 | MS.gene56417:intron | 40.0% | |
| GATTTGGGTCTTACACTTGA+AGG | - | chr4.4:28787852-28787871 | MS.gene56417:intron | 40.0% | |
| GCAGGGATAATTTACAAGTC+GGG | - | chr4.4:28785073-28785092 | MS.gene56417:CDS | 40.0% | |
| GCTCGCGCTATGATTAAATT+TGG | - | chr4.4:28786116-28786135 | MS.gene56417:intron | 40.0% | |
| GCTGAAGCTATAGAGAAGAT+TGG | - | chr4.4:28786410-28786429 | MS.gene56417:intron | 40.0% | |
| GCTTATTCCCTAAAGTAGCA+GGG | + | chr4.4:28790110-28790129 | None:intergenic | 40.0% | |
| GGACATGATCATTCAGATCT+GGG | + | chr4.4:28786941-28786960 | None:intergenic | 40.0% | |
| GGTAATTGAAGAAGGGATGA+AGG | - | chr4.4:28786484-28786503 | MS.gene56417:CDS | 40.0% | |
| TATATGGTGTAACTGTGTGG+GGG | - | chr4.4:28787663-28787682 | MS.gene56417:intron | 40.0% | |
| TCAAAGGGCCATACAGTATA+GGG | + | chr4.4:28785751-28785770 | None:intergenic | 40.0% | |
| TCCTCCGCAATAATTAAGAG+CGG | + | chr4.4:28787162-28787181 | None:intergenic | 40.0% | |
| TGCTCCGCTCTTAATTATTG+CGG | - | chr4.4:28787155-28787174 | MS.gene56417:intron | 40.0% | |
| TGGTTTCTCCATCTACAATG+TGG | + | chr4.4:28790412-28790431 | None:intergenic | 40.0% | |
| TTGCTCATCTAGATCTTCCA+TGG | + | chr4.4:28789494-28789513 | None:intergenic | 40.0% | |
| TTTACTTGCAACCTACAAGC+AGG | + | chr4.4:28786051-28786070 | None:intergenic | 40.0% | |
| TTTCATAAGCTATCCCAGAG+AGG | + | chr4.4:28785614-28785633 | None:intergenic | 40.0% | |
| ! | ATAAATGAGGGACTTGTTCC+TGG | - | chr4.4:28789415-28789434 | MS.gene56417:intron | 40.0% |
| ! | ATGAATGATTTGGCTGGTGA+TGG | - | chr4.4:28786071-28786090 | MS.gene56417:intron | 40.0% |
| ! | ATTTTTCTCTCCTAAGGGAC+AGG | + | chr4.4:28790634-28790653 | None:intergenic | 40.0% |
| ! | GAAGTATTCCTGTTGAAGGA+AGG | - | chr4.4:28786231-28786250 | MS.gene56417:intron | 40.0% |
| ! | GGATTTTCTCTGTGGAGATT+TGG | - | chr4.4:28787836-28787855 | MS.gene56417:intron | 40.0% |
| ! | GTTTTCATAAGCCATCTTGG+GGG | + | chr4.4:28788989-28789008 | None:intergenic | 40.0% |
| ! | TCTTTTGCACTAGATGGAGT+TGG | + | chr4.4:28788559-28788578 | None:intergenic | 40.0% |
| ! | TTTTCATAAGCCATCTTGGG+GGG | + | chr4.4:28788988-28789007 | None:intergenic | 40.0% |
| ! | TTTTCCCCTCCTTTTCTTGT+AGG | - | chr4.4:28790750-28790769 | MS.gene56417:intron | 40.0% |
| ! | TTTTTCTCTCCTAAGGGACA+GGG | + | chr4.4:28790633-28790652 | None:intergenic | 40.0% |
| !! | ACTCCACAATGGATTTTTCC+TGG | + | chr4.4:28787047-28787066 | None:intergenic | 40.0% |
| !! | ATTCTTCCCCTGCTACTTTA+GGG | - | chr4.4:28790100-28790119 | MS.gene56417:CDS | 40.0% |
| !! | CACAATGGATTTTTCCTGGT+TGG | + | chr4.4:28787043-28787062 | None:intergenic | 40.0% |
| !! | GCAAATTGGTGCTGATATTG+TGG | - | chr4.4:28789510-28789529 | MS.gene56417:CDS | 40.0% |
| !! | GCTTGAGATTCTAGAGTACT+TGG | + | chr4.4:28790332-28790351 | None:intergenic | 40.0% |
| !! | GGATTATCAGCAGTTGCTTT+TGG | - | chr4.4:28786137-28786156 | MS.gene56417:intron | 40.0% |
| !! | GGTTCTGAGTTCAATGACAT+TGG | - | chr4.4:28788311-28788330 | MS.gene56417:intron | 40.0% |
| !! | TAAAACCACGGTATTGACAC+GGG | + | chr4.4:28790500-28790519 | None:intergenic | 40.0% |
| !! | TATTCTTCCCCTGCTACTTT+AGG | - | chr4.4:28790099-28790118 | MS.gene56417:CDS | 40.0% |
| AACATTCTTGCGTGAGGGTT+TGG | - | chr4.4:28788416-28788435 | MS.gene56417:intron | 45.0% | |
| AAGCCTAGTATGAAGGAAGC+TGG | + | chr4.4:28787358-28787377 | None:intergenic | 45.0% | |
| AATGTGGACCATCCAGGAAA+TGG | + | chr4.4:28790396-28790415 | None:intergenic | 45.0% | |
| ACAAGATCTTGCGCTCATGA+CGG | - | chr4.4:28787290-28787309 | MS.gene56417:intron | 45.0% | |
| ACACACTGAGCTAGAACTTG+AGG | - | chr4.4:28789345-28789364 | MS.gene56417:intron | 45.0% | |
| ACCTGCCATAAAGAACTCCA+TGG | - | chr4.4:28789474-28789493 | MS.gene56417:intron | 45.0% | |
| ACGTACTGAAACAATCCGCT+AGG | + | chr4.4:28787590-28787609 | None:intergenic | 45.0% | |
| ACTAGCAACATTCTTGCGTG+AGG | - | chr4.4:28788410-28788429 | MS.gene56417:intron | 45.0% | |
| AGAATTGCGAAACTCACTGG+CGG | - | chr4.4:28788044-28788063 | MS.gene56417:CDS | 45.0% | |
| AGAGAGGAGCTTGTCGAAAT+AGG | + | chr4.4:28785598-28785617 | None:intergenic | 45.0% | |
| AGATGATGAGGATGACTCGA+TGG | + | chr4.4:28786453-28786472 | None:intergenic | 45.0% | |
| AGCAATGGGACATCCTTCTT+CGG | + | chr4.4:28788230-28788249 | None:intergenic | 45.0% | |
| ATCGGATACAATGCCATGAC+TGG | - | chr4.4:28790954-28790973 | MS.gene56417:CDS | 45.0% | |
| ATCTACAATGTGGACCATCC+AGG | + | chr4.4:28790402-28790421 | None:intergenic | 45.0% | |
| ATGGAAGAGAATCGATTGGG+AGG | + | chr4.4:28784889-28784908 | None:intergenic | 45.0% | |
| ATGGACCGTAGATAGTTCAG+TGG | + | chr4.4:28790432-28790451 | None:intergenic | 45.0% | |
| ATTCAACCAAGGACCGAAGA+AGG | - | chr4.4:28788214-28788233 | MS.gene56417:intron | 45.0% | |
| ATTTCGACAAGCTCCTCTCT+GGG | - | chr4.4:28785598-28785617 | MS.gene56417:intron | 45.0% | |
| CACAGAGGTTTCAGATGATG+AGG | + | chr4.4:28786465-28786484 | None:intergenic | 45.0% | |
| CAGGTATCAAGTCCAAAAGG+TGG | + | chr4.4:28789459-28789478 | None:intergenic | 45.0% | |
| CCCTTCTTCAATTACCACAG+AGG | + | chr4.4:28786480-28786499 | None:intergenic | 45.0% | |
| CTAATTCAAGAGGTCGACCA+TGG | - | chr4.4:28785943-28785962 | MS.gene56417:intron | 45.0% | |
| CTAGCAACATTCTTGCGTGA+GGG | - | chr4.4:28788411-28788430 | MS.gene56417:intron | 45.0% | |
| CTCCGACGAAAAGACTGAAA+CGG | + | chr4.4:28784997-28785016 | None:intergenic | 45.0% | |
| CTTTCATTGCAGTACCAAGC+TGG | + | chr4.4:28787890-28787909 | None:intergenic | 45.0% | |
| GAGAGAATTGCGAAACTCAC+TGG | - | chr4.4:28788041-28788060 | MS.gene56417:CDS | 45.0% | |
| GAGAGGAGCTTGTCGAAATA+GGG | + | chr4.4:28785597-28785616 | None:intergenic | 45.0% | |
| GCTGGAAATGACGAGTATGT+TGG | - | chr4.4:28786377-28786396 | MS.gene56417:intron | 45.0% | |
| GCTGTAAAATGTCCAGGACT+CGG | - | chr4.4:28787246-28787265 | MS.gene56417:intron | 45.0% | |
| GGATAGAAAGCTGAGGATTG+AGG | - | chr4.4:28789366-28789385 | MS.gene56417:intron | 45.0% | |
| GGCGAATAGTCAGACCAAAA+TGG | + | chr4.4:28784976-28784995 | None:intergenic | 45.0% | |
| GGCTTATTCCCTAAAGTAGC+AGG | + | chr4.4:28790111-28790130 | None:intergenic | 45.0% | |
| GGGACATGATCATTCAGATC+TGG | + | chr4.4:28786942-28786961 | None:intergenic | 45.0% | |
| GTCATTTCCAGCAGAAATCG+AGG | + | chr4.4:28786369-28786388 | None:intergenic | 45.0% | |
| GTCCAAAAGGTGGACATATG+TGG | + | chr4.4:28789449-28789468 | None:intergenic | 45.0% | |
| GTCGACCTCTTGAATTAGCA+TGG | + | chr4.4:28785941-28785960 | None:intergenic | 45.0% | |
| GTGTTAACCTTTGGGTCCAA+CGG | + | chr4.4:28785130-28785149 | None:intergenic | 45.0% | |
| GTTGCAGCTGTAAAATGTCC+AGG | - | chr4.4:28787240-28787259 | MS.gene56417:intron | 45.0% | |
| TAACTCAGATGCAAACACGC+AGG | + | chr4.4:28790597-28790616 | None:intergenic | 45.0% | |
| TACTGAAACAATCCGCTAGG+TGG | + | chr4.4:28787587-28787606 | None:intergenic | 45.0% | |
| TATTTCGACAAGCTCCTCTC+TGG | - | chr4.4:28785597-28785616 | MS.gene56417:intron | 45.0% | |
| TCCATGGAGTTCTTTATGGC+AGG | + | chr4.4:28789478-28789497 | None:intergenic | 45.0% | |
| TCCGATGCAATTGAGAATGC+TGG | - | chr4.4:28785913-28785932 | MS.gene56417:intron | 45.0% | |
| TCCGCTCTTAATTATTGCGG+AGG | - | chr4.4:28787158-28787177 | MS.gene56417:intron | 45.0% | |
| TCCTTACTTCATCACCAACC+AGG | - | chr4.4:28787026-28787045 | MS.gene56417:intron | 45.0% | |
| TCGGAGAAACCCACAATTTG+TGG | - | chr4.4:28785011-28785030 | MS.gene56417:CDS | 45.0% | |
| TGGAAGAGAATCGATTGGGA+GGG | + | chr4.4:28784888-28784907 | None:intergenic | 45.0% | |
| TGGATGGTCCACATTGTAGA+TGG | - | chr4.4:28790401-28790420 | MS.gene56417:intron | 45.0% | |
| TGGCAGGTATCAAGTCCAAA+AGG | + | chr4.4:28789462-28789481 | None:intergenic | 45.0% | |
| TGGCGGTATAGCCGTTATAA+AGG | - | chr4.4:28788061-28788080 | MS.gene56417:CDS | 45.0% | |
| TGTGCACCTACCTACACAAT+TGG | + | chr4.4:28789328-28789347 | None:intergenic | 45.0% | |
| TTGCTCGCACCACAAATTGT+GGG | + | chr4.4:28785023-28785042 | None:intergenic | 45.0% | |
| TTGGACAGTATGGCTGTCTT+GGG | - | chr4.4:28787499-28787518 | MS.gene56417:intron | 45.0% | |
| ! | CTCATCATCTGAAACCTCTG+TGG | - | chr4.4:28786463-28786482 | MS.gene56417:CDS | 45.0% |
| ! | TCTCTGAGAGCTTTCTCGAA+TGG | + | chr4.4:28788025-28788044 | None:intergenic | 45.0% |
| ! | TGCCACATATGTCCACCTTT+TGG | - | chr4.4:28789444-28789463 | MS.gene56417:intron | 45.0% |
| !! | AAAACCACGGTATTGACACG+GGG | + | chr4.4:28790499-28790518 | None:intergenic | 45.0% |
| !! | AGGGTGATGGGAAACAAAGA+GGG | + | chr4.4:28789027-28789046 | None:intergenic | 45.0% |
| !! | CGCTAGGTGGATTGTAATCT+TGG | + | chr4.4:28787574-28787593 | None:intergenic | 45.0% |
| !! | TAGGGTGATGGGAAACAAAG+AGG | + | chr4.4:28789028-28789047 | None:intergenic | 45.0% |
| !! | TCCTGGTTGGTGATGAAGTA+AGG | + | chr4.4:28787030-28787049 | None:intergenic | 45.0% |
| !! | TGGTGCCATGCTAATTCAAG+AGG | - | chr4.4:28785933-28785952 | MS.gene56417:intron | 45.0% |
| !!! | AAAAAAAATTATTTTGTTTT+TGG | + | chr4.4:28786788-28786807 | None:intergenic | 5.0% |
| AAATGTCCAGGACTCGGAGA+TGG | - | chr4.4:28787252-28787271 | MS.gene56417:intron | 50.0% | |
| AGAGGTCGACCATGGTTGTT+AGG | - | chr4.4:28785951-28785970 | MS.gene56417:intron | 50.0% | |
| AGGGACAGGGTTAGGCTATA+TGG | + | chr4.4:28790620-28790639 | None:intergenic | 50.0% | |
| AGTTAGAACCACGCCAGCAA+TGG | + | chr4.4:28791057-28791076 | None:intergenic | 50.0% | |
| ATAGCCTAACCCTGTCCCTT+AGG | - | chr4.4:28790621-28790640 | MS.gene56417:intron | 50.0% | |
| CAAAGTGCAGTCTCCATTGC+TGG | - | chr4.4:28791041-28791060 | MS.gene56417:intron | 50.0% | |
| CAAGATCTTGCGCTCATGAC+GGG | - | chr4.4:28787291-28787310 | MS.gene56417:intron | 50.0% | |
| CATGTTGTAAGAGTCTGGGC+TGG | + | chr4.4:28785471-28785490 | None:intergenic | 50.0% | |
| CTGCCAGCTTCCTTCATACT+AGG | - | chr4.4:28787352-28787371 | MS.gene56417:intron | 50.0% | |
| CTTGCTCGCACCACAAATTG+TGG | + | chr4.4:28785024-28785043 | None:intergenic | 50.0% | |
| CTTTGATTACAGCTCCCCTC+TGG | - | chr4.4:28790548-28790567 | MS.gene56417:intron | 50.0% | |
| GATGCTGTCTCTCTTACCGT+TGG | - | chr4.4:28785111-28785130 | MS.gene56417:CDS | 50.0% | |
| GCACATCTTGCAACTCGACT+AGG | + | chr4.4:28791017-28791036 | None:intergenic | 50.0% | |
| GCAGCTAATGCTGGAGTTGA+TGG | - | chr4.4:28790891-28790910 | MS.gene56417:CDS | 50.0% | |
| GGTACAACATCAGACCAGCT+TGG | - | chr4.4:28787873-28787892 | MS.gene56417:intron | 50.0% | |
| GTTGGACAGTATGGCTGTCT+TGG | - | chr4.4:28787498-28787517 | MS.gene56417:intron | 50.0% | |
| TAAGGACAGCCCATGATGAC+AGG | + | chr4.4:28788108-28788127 | None:intergenic | 50.0% | |
| TCTCTTACCGTTGGACCCAA+AGG | - | chr4.4:28785120-28785139 | MS.gene56417:intron | 50.0% | |
| TTCTTTCCATCTCCGAGTCC+TGG | + | chr4.4:28787261-28787280 | None:intergenic | 50.0% | |
| ! | AATGAGGGACTTGTTCCTGG+AGG | - | chr4.4:28789418-28789437 | MS.gene56417:intron | 50.0% |
| ! | ACAGGTGCGGATTTTCTCTG+TGG | - | chr4.4:28787828-28787847 | MS.gene56417:intron | 50.0% |
| ! | ATGAGGGACTTGTTCCTGGA+GGG | - | chr4.4:28789419-28789438 | MS.gene56417:intron | 50.0% |
| ! | CGCCGTTTCAGTCTTTTCGT+CGG | - | chr4.4:28784992-28785011 | MS.gene56417:CDS | 50.0% |
| ! | TCACTTCGCTCCGTCCATTT+TGG | - | chr4.4:28784959-28784978 | MS.gene56417:CDS | 50.0% |
| !! | AAACCACGGTATTGACACGG+GGG | + | chr4.4:28790498-28790517 | None:intergenic | 50.0% |
| !! | TGGTGCTGATATTGTGGCGA+AGG | - | chr4.4:28789516-28789535 | MS.gene56417:CDS | 50.0% |
| AATGGACGGAGCGAAGTGAG+AGG | + | chr4.4:28784958-28784977 | None:intergenic | 55.0% | |
| ACATACCCCTCAGTTGCCAG+AGG | + | chr4.4:28790567-28790586 | None:intergenic | 55.0% | |
| AGGCTACAGCTGCACAAGGT+GGG | + | chr4.4:28786349-28786368 | None:intergenic | 55.0% | |
| ATACCCCTCAGTTGCCAGAG+GGG | + | chr4.4:28790565-28790584 | None:intergenic | 55.0% | |
| ATCGAGGCTACAGCTGCACA+AGG | + | chr4.4:28786353-28786372 | None:intergenic | 55.0% | |
| ATGGACGGAGCGAAGTGAGA+GGG | + | chr4.4:28784957-28784976 | None:intergenic | 55.0% | |
| CATACCCCTCAGTTGCCAGA+GGG | + | chr4.4:28790566-28790585 | None:intergenic | 55.0% | |
| CTCTCCTAAGGGACAGGGTT+AGG | + | chr4.4:28790628-28790647 | None:intergenic | 55.0% | |
| GCTGTAGCCTCGATTTCTGC+TGG | - | chr4.4:28786359-28786378 | MS.gene56417:intron | 55.0% | |
| GGACATCCTTCTTCGGTCCT+TGG | + | chr4.4:28788223-28788242 | None:intergenic | 55.0% | |
| GGACGTCACTGCACAAGTGT+TGG | - | chr4.4:28787179-28787198 | MS.gene56417:intron | 55.0% | |
| GGAGGTCAACCAAGCAAAGC+TGG | + | chr4.4:28787792-28787811 | None:intergenic | 55.0% | |
| GGAGTTATACCAGGGACCAG+AGG | + | chr4.4:28791128-28791147 | None:intergenic | 55.0% | |
| ! | ACCAGAGGTACACGTGGCTT+GGG | + | chr4.4:28791113-28791132 | None:intergenic | 55.0% |
| ! | TGAGGGACTTGTTCCTGGAG+GGG | - | chr4.4:28789420-28789439 | MS.gene56417:intron | 55.0% |
| ACATATGTGGCACCCCCTCC+AGG | + | chr4.4:28789436-28789455 | None:intergenic | 60.0% | |
| ACCCAAGCCACGTGTACCTC+TGG | - | chr4.4:28791109-28791128 | MS.gene56417:CDS | 60.0% | |
| AGCTCCCCTCTGGCAACTGA+GGG | - | chr4.4:28790558-28790577 | MS.gene56417:intron | 60.0% | |
| CACGGGGGAGGAAGGATGAA+TGG | + | chr4.4:28790483-28790502 | None:intergenic | 60.0% | |
| GAGGCTACAGCTGCACAAGG+TGG | + | chr4.4:28786350-28786369 | None:intergenic | 60.0% | |
| GGCTACAGCTGCACAAGGTG+GGG | + | chr4.4:28786348-28786367 | None:intergenic | 60.0% | |
| TGCAGTCTCCATTGCTGGCG+TGG | - | chr4.4:28791046-28791065 | MS.gene56417:intron | 60.0% | |
| TGGACGGAGCGAAGTGAGAG+GGG | + | chr4.4:28784956-28784975 | None:intergenic | 60.0% | |
| ! | GACCAGAGGTACACGTGGCT+TGG | + | chr4.4:28791114-28791133 | None:intergenic | 60.0% |
| ! | GAGGGACTTGTTCCTGGAGG+GGG | - | chr4.4:28789421-28789440 | MS.gene56417:intron | 60.0% |
| !! | GGTATTGACACGGGGGAGGA+AGG | + | chr4.4:28790491-28790510 | None:intergenic | 60.0% |
| CAGCTCCCCTCTGGCAACTG+AGG | - | chr4.4:28790557-28790576 | MS.gene56417:intron | 65.0% | |
| CCACGTGTACCTCTGGTCCC+TGG | - | chr4.4:28791116-28791135 | MS.gene56417:CDS | 65.0% | |
| CCTCCCCCGTGTCAATACCG+TGG | - | chr4.4:28790492-28790511 | MS.gene56417:intron | 65.0% | |
| GCTCCCCTCTGGCAACTGAG+GGG | - | chr4.4:28790559-28790578 | MS.gene56417:intron | 65.0% | |
| GGACGGAGCGAAGTGAGAGG+GGG | + | chr4.4:28784955-28784974 | None:intergenic | 65.0% | |
| ! | CCAGGGACCAGAGGTACACG+TGG | + | chr4.4:28791119-28791138 | None:intergenic | 65.0% |
| !! | CCACGGTATTGACACGGGGG+AGG | + | chr4.4:28790495-28790514 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 28784844 | 28791151 | 28784844 | ID=MS.gene56417 |
| chr4.4 | mRNA | 28784844 | 28791151 | 28784844 | ID=MS.gene56417.t1;Parent=MS.gene56417 |
| chr4.4 | exon | 28791074 | 28791151 | 28791074 | ID=MS.gene56417.t1.exon1;Parent=MS.gene56417.t1 |
| chr4.4 | CDS | 28791074 | 28791151 | 28791074 | ID=cds.MS.gene56417.t1;Parent=MS.gene56417.t1 |
| chr4.4 | exon | 28790854 | 28790992 | 28790854 | ID=MS.gene56417.t1.exon2;Parent=MS.gene56417.t1 |
| chr4.4 | CDS | 28790854 | 28790992 | 28790854 | ID=cds.MS.gene56417.t1;Parent=MS.gene56417.t1 |
| chr4.4 | exon | 28790041 | 28790162 | 28790041 | ID=MS.gene56417.t1.exon3;Parent=MS.gene56417.t1 |
| chr4.4 | CDS | 28790041 | 28790162 | 28790041 | ID=cds.MS.gene56417.t1;Parent=MS.gene56417.t1 |
| chr4.4 | exon | 28789729 | 28789936 | 28789729 | ID=MS.gene56417.t1.exon4;Parent=MS.gene56417.t1 |
| chr4.4 | CDS | 28789729 | 28789936 | 28789729 | ID=cds.MS.gene56417.t1;Parent=MS.gene56417.t1 |
| chr4.4 | exon | 28789490 | 28789635 | 28789490 | ID=MS.gene56417.t1.exon5;Parent=MS.gene56417.t1 |
| chr4.4 | CDS | 28789490 | 28789635 | 28789490 | ID=cds.MS.gene56417.t1;Parent=MS.gene56417.t1 |
| chr4.4 | exon | 28788683 | 28788989 | 28788683 | ID=MS.gene56417.t1.exon6;Parent=MS.gene56417.t1 |
| chr4.4 | CDS | 28788683 | 28788989 | 28788683 | ID=cds.MS.gene56417.t1;Parent=MS.gene56417.t1 |
| chr4.4 | exon | 28787913 | 28788163 | 28787913 | ID=MS.gene56417.t1.exon7;Parent=MS.gene56417.t1 |
| chr4.4 | CDS | 28787913 | 28788163 | 28787913 | ID=cds.MS.gene56417.t1;Parent=MS.gene56417.t1 |
| chr4.4 | exon | 28786458 | 28786658 | 28786458 | ID=MS.gene56417.t1.exon8;Parent=MS.gene56417.t1 |
| chr4.4 | CDS | 28786458 | 28786658 | 28786458 | ID=cds.MS.gene56417.t1;Parent=MS.gene56417.t1 |
| chr4.4 | exon | 28784844 | 28785131 | 28784844 | ID=MS.gene56417.t1.exon9;Parent=MS.gene56417.t1 |
| chr4.4 | CDS | 28784844 | 28785131 | 28784844 | ID=cds.MS.gene56417.t1;Parent=MS.gene56417.t1 |
| Gene Sequence |
| Protein sequence |
