Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66498.t1 | XP_013465956.1 | 99.1 | 588 | 4 | 1 | 1 | 588 | 1 | 587 | 1.1e-308 | 1068.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66498.t1 | P08927 | 93.2 | 586 | 39 | 1 | 3 | 588 | 6 | 590 | 1.6e-292 | 1006.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66498.t1 | A0A072VDW9 | 99.1 | 588 | 4 | 1 | 1 | 588 | 1 | 587 | 7.7e-309 | 1068.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene66498 | 0.821304 | 4.33E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene66498 | 0.815405 | 9.40E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene66498 | 0.877932 | 4.23E-69 | -1.69E-46 |
| MS.gene050076 | MS.gene66498 | 0.800877 | 1.17E-48 | -1.69E-46 |
| MS.gene050099 | MS.gene66498 | 0.884275 | 2.20E-71 | -1.69E-46 |
| MS.gene050128 | MS.gene66498 | 0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene66498 | 0.84365 | 1.23E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene66498 | 0.825267 | 5.15E-54 | -1.69E-46 |
| MS.gene051471 | MS.gene66498 | 0.856615 | 2.85E-62 | -1.69E-46 |
| MS.gene051662 | MS.gene66498 | 0.909377 | 6.09E-82 | -1.69E-46 |
| MS.gene051663 | MS.gene66498 | 0.946692 | 2.84E-105 | -1.69E-46 |
| MS.gene052078 | MS.gene66498 | 0.843671 | 1.21E-58 | -1.69E-46 |
| MS.gene052178 | MS.gene66498 | 0.817585 | 3.06E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene66498 | 0.829273 | 5.64E-55 | -1.69E-46 |
| MS.gene052207 | MS.gene66498 | 0.820128 | 8.08E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene66498 | 0.862912 | 3.62E-64 | -1.69E-46 |
| MS.gene053559 | MS.gene66498 | 0.834322 | 3.20E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene66498 | 0.875075 | 4.10E-68 | -1.69E-46 |
| MS.gene054123 | MS.gene66498 | 0.836329 | 9.98E-57 | -1.69E-46 |
| MS.gene05455 | MS.gene66498 | 0.819563 | 1.09E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene66498 | 0.810508 | 1.11E-50 | -1.69E-46 |
| MS.gene054942 | MS.gene66498 | 0.821071 | 4.91E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene66498 | 0.859754 | 3.32E-63 | -1.69E-46 |
| MS.gene055390 | MS.gene66498 | 0.865396 | 6.09E-65 | -1.69E-46 |
| MS.gene055422 | MS.gene66498 | 0.879258 | 1.44E-69 | -1.69E-46 |
| MS.gene055428 | MS.gene66498 | 0.848697 | 5.20E-60 | -1.69E-46 |
| MS.gene055604 | MS.gene66498 | 0.802806 | 4.71E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene66498 | 0.805927 | 1.05E-49 | -1.69E-46 |
| MS.gene055896 | MS.gene66498 | 0.810181 | 1.31E-50 | -1.69E-46 |
| MS.gene056069 | MS.gene66498 | -0.80555 | 1.26E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene66498 | 0.804336 | 2.27E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene66498 | 0.832234 | 1.06E-55 | -1.69E-46 |
| MS.gene057121 | MS.gene66498 | 0.82738 | 1.62E-54 | -1.69E-46 |
| MS.gene057439 | MS.gene66498 | 0.881554 | 2.18E-70 | -1.69E-46 |
| MS.gene058002 | MS.gene66498 | 0.846724 | 1.82E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene66498 | 0.857028 | 2.16E-62 | -1.69E-46 |
| MS.gene058293 | MS.gene66498 | 0.803188 | 3.93E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene66498 | 0.848442 | 6.11E-60 | -1.69E-46 |
| MS.gene058749 | MS.gene66498 | 0.839852 | 1.24E-57 | -1.69E-46 |
| MS.gene058845 | MS.gene66498 | 0.837286 | 5.68E-57 | -1.69E-46 |
| MS.gene05907 | MS.gene66498 | 0.837083 | 6.41E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene66498 | 0.802638 | 5.10E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene66498 | 0.847434 | 1.16E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene66498 | 0.838849 | 2.25E-57 | -1.69E-46 |
| MS.gene05959 | MS.gene66498 | 0.803352 | 3.63E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene66498 | 0.803482 | 3.41E-49 | -1.69E-46 |
| MS.gene059708 | MS.gene66498 | 0.810912 | 9.10E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene66498 | 0.812597 | 3.91E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene66498 | 0.824823 | 6.55E-54 | -1.69E-46 |
| MS.gene060005 | MS.gene66498 | 0.803663 | 3.13E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene66498 | 0.831881 | 1.30E-55 | -1.69E-46 |
| MS.gene060476 | MS.gene66498 | 0.830717 | 2.51E-55 | -1.69E-46 |
| MS.gene06090 | MS.gene66498 | 0.808172 | 3.53E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene66498 | 0.831718 | 1.42E-55 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66498.t1 | MTR_1g017390 | 99.150 | 588 | 4 | 1 | 1 | 588 | 1 | 587 | 0.0 | 1154 |
| MS.gene66498.t1 | MTR_1g017380 | 98.639 | 588 | 7 | 1 | 1 | 588 | 1 | 587 | 0.0 | 1148 |
| MS.gene66498.t1 | MTR_4g057970 | 51.024 | 586 | 281 | 5 | 1 | 584 | 1 | 582 | 0.0 | 545 |
| MS.gene66498.t1 | MTR_4g084130 | 47.681 | 539 | 276 | 5 | 41 | 577 | 34 | 568 | 5.38e-170 | 495 |
| MS.gene66498.t1 | MTR_1g090140 | 45.548 | 584 | 298 | 6 | 8 | 586 | 5 | 573 | 1.61e-168 | 491 |
| MS.gene66498.t1 | MTR_1g090130 | 46.679 | 527 | 276 | 3 | 48 | 573 | 34 | 556 | 9.20e-163 | 477 |
| MS.gene66498.t1 | MTR_8g017080 | 43.376 | 551 | 302 | 5 | 42 | 586 | 29 | 575 | 7.92e-150 | 444 |
| MS.gene66498.t1 | MTR_4g084130 | 47.912 | 455 | 234 | 3 | 125 | 577 | 3 | 456 | 6.39e-144 | 424 |
| MS.gene66498.t1 | MTR_0991s0010 | 97.312 | 186 | 4 | 1 | 1 | 186 | 1 | 185 | 1.20e-118 | 349 |
| MS.gene66498.t1 | MTR_5g087560 | 23.218 | 547 | 320 | 20 | 65 | 566 | 30 | 521 | 3.76e-11 | 66.2 |
| MS.gene66498.t1 | MTR_7g067470 | 36.434 | 129 | 74 | 3 | 66 | 192 | 26 | 148 | 6.49e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66498.t1 | AT1G55490 | 89.698 | 563 | 55 | 2 | 26 | 588 | 37 | 596 | 0.0 | 1003 |
| MS.gene66498.t1 | AT1G55490 | 89.698 | 563 | 55 | 2 | 26 | 588 | 37 | 596 | 0.0 | 1003 |
| MS.gene66498.t1 | AT1G55490 | 89.698 | 563 | 55 | 2 | 26 | 588 | 37 | 596 | 0.0 | 1003 |
| MS.gene66498.t1 | AT1G55490 | 89.698 | 563 | 55 | 2 | 26 | 588 | 37 | 596 | 0.0 | 1003 |
| MS.gene66498.t1 | AT1G55490 | 89.698 | 563 | 55 | 2 | 26 | 588 | 37 | 596 | 0.0 | 1003 |
| MS.gene66498.t1 | AT3G13470 | 90.399 | 552 | 52 | 1 | 37 | 588 | 42 | 592 | 0.0 | 996 |
| MS.gene66498.t1 | AT5G56500 | 88.750 | 560 | 60 | 3 | 30 | 588 | 36 | 593 | 0.0 | 987 |
| MS.gene66498.t1 | AT5G56500 | 88.750 | 560 | 60 | 3 | 30 | 588 | 36 | 593 | 0.0 | 987 |
| MS.gene66498.t1 | AT1G26230 | 66.841 | 573 | 189 | 1 | 13 | 584 | 4 | 576 | 0.0 | 789 |
| MS.gene66498.t1 | AT1G26230 | 68.786 | 519 | 162 | 0 | 66 | 584 | 6 | 524 | 0.0 | 748 |
| MS.gene66498.t1 | AT1G26230 | 69.126 | 515 | 159 | 0 | 70 | 584 | 2 | 516 | 0.0 | 746 |
| MS.gene66498.t1 | AT1G26230 | 65.422 | 509 | 175 | 1 | 13 | 520 | 4 | 512 | 0.0 | 680 |
| MS.gene66498.t1 | AT1G26230 | 64.920 | 439 | 153 | 1 | 13 | 450 | 4 | 442 | 0.0 | 583 |
| MS.gene66498.t1 | AT2G28000 | 51.397 | 537 | 256 | 4 | 37 | 572 | 37 | 569 | 0.0 | 530 |
| MS.gene66498.t1 | AT3G23990 | 45.629 | 572 | 294 | 5 | 8 | 578 | 5 | 560 | 2.43e-167 | 488 |
| MS.gene66498.t1 | AT2G33210 | 46.073 | 573 | 289 | 7 | 10 | 579 | 7 | 562 | 2.96e-167 | 489 |
| MS.gene66498.t1 | AT2G33210 | 45.899 | 573 | 285 | 8 | 10 | 579 | 7 | 557 | 1.85e-163 | 479 |
| MS.gene66498.t1 | AT3G13860 | 46.296 | 540 | 280 | 5 | 48 | 584 | 33 | 565 | 4.19e-156 | 459 |
| MS.gene66498.t1 | AT5G18820 | 47.681 | 539 | 275 | 6 | 44 | 579 | 31 | 565 | 6.75e-156 | 459 |
| MS.gene66498.t1 | AT5G18820 | 46.943 | 458 | 239 | 4 | 125 | 579 | 3 | 459 | 9.24e-128 | 383 |
| MS.gene66498.t1 | AT5G18820 | 45.714 | 385 | 205 | 3 | 44 | 427 | 31 | 412 | 4.28e-103 | 319 |
| MS.gene66498.t1 | AT3G11830 | 23.285 | 554 | 309 | 21 | 65 | 566 | 30 | 519 | 9.68e-12 | 68.2 |
| MS.gene66498.t1 | AT3G11830 | 23.201 | 556 | 309 | 21 | 65 | 566 | 30 | 521 | 1.73e-11 | 67.4 |
Find 0 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAAAAAAGAAAAAAAAA+AGG | + | 10836:4859-4878 | MS.gene66498:intergenic | 10.0% |
| !!! | AAAGAAAAAATAAATCTTTT+TGG | + | 10836:4486-4505 | MS.gene66498:intergenic | 10.0% |
| !!! | AGTTTTTTTTATTTTTCATA+TGG | - | 10836:7016-7035 | MS.gene66498:CDS | 10.0% |
| !!! | TTAAAAAATGAGAAATATTT+TGG | - | 10836:6363-6382 | MS.gene66498:intron | 10.0% |
| !! | ACTATTAATGTAAAAAACAT+AGG | + | 10836:5276-5295 | MS.gene66498:intergenic | 15.0% |
| !! | GATAAATTAATGAACATTAT+GGG | + | 10836:6821-6840 | MS.gene66498:intergenic | 15.0% |
| !!! | ATTATATCACTTTATCTTTT+TGG | - | 10836:4604-4623 | MS.gene66498:intron | 15.0% |
| !!! | CTTATCAAATTATTTTGTAA+TGG | - | 10836:4663-4682 | MS.gene66498:intron | 15.0% |
| !!! | GTTTTTGTAAATAAATAGTT+AGG | - | 10836:5080-5099 | MS.gene66498:intron | 15.0% |
| !!! | GTTTTTTTAGATTGATTAAT+TGG | - | 10836:5102-5121 | MS.gene66498:intron | 15.0% |
| !!! | TCTTTTTTTATGAATTGAAA+TGG | - | 10836:4867-4886 | MS.gene66498:intron | 15.0% |
| !!! | TGTTAGTTTTGATTAAATTT+TGG | - | 10836:7525-7544 | MS.gene66498:intron | 15.0% |
| !!! | TTTACAAAAAAAACAGATTT+TGG | + | 10836:4779-4798 | MS.gene66498:intergenic | 15.0% |
| !! | AAAATGTCTACATATTATAC+AGG | - | 10836:6520-6539 | MS.gene66498:intron | 20.0% |
| !! | AAATTAATAGCAAAAAATGC+TGG | - | 10836:7206-7225 | MS.gene66498:CDS | 20.0% |
| !! | AAGTTTAAATGAAAAAGATG+AGG | + | 10836:5348-5367 | MS.gene66498:intergenic | 20.0% |
| !! | ACTAGAACATAAAATAAATC+AGG | + | 10836:7702-7721 | MS.gene66498:intergenic | 20.0% |
| !! | ACTAGAGAAAAAAAAAATAC+AGG | + | 10836:7445-7464 | MS.gene66498:intergenic | 20.0% |
| !! | AGTTTAAATGAAAAAGATGA+GGG | + | 10836:5347-5366 | MS.gene66498:intergenic | 20.0% |
| !! | ATTTGTAAATTATGAAATGG+AGG | - | 10836:4943-4962 | MS.gene66498:CDS | 20.0% |
| !! | CAAAATATGCAAAAAAATGT+GGG | + | 10836:4279-4298 | MS.gene66498:intergenic | 20.0% |
| !! | CAGATTTGTAAATTATGAAA+TGG | - | 10836:4940-4959 | MS.gene66498:CDS | 20.0% |
| !! | GGATAAATTAATGAACATTA+TGG | + | 10836:6822-6841 | MS.gene66498:intergenic | 20.0% |
| !! | GTATAAAAATTGGCTAAATT+TGG | - | 10836:7257-7276 | MS.gene66498:CDS | 20.0% |
| !! | TAACTAATAAATGCTTGATT+TGG | - | 10836:4024-4043 | MS.gene66498:intron | 20.0% |
| !! | TACACAAAAAAACAAGAAAA+CGG | + | 10836:4208-4227 | MS.gene66498:intergenic | 20.0% |
| !! | TTCAATTGAGTTATTGTATT+TGG | - | 10836:3505-3524 | MS.gene66498:intron | 20.0% |
| !! | TTCCTTAAAAAAATTGTATG+TGG | - | 10836:7608-7627 | MS.gene66498:intron | 20.0% |
| !! | TTTAGTGAATTAGTTATATG+TGG | - | 10836:3796-3815 | MS.gene66498:CDS | 20.0% |
| !!! | ACATTTTTTTGCATATTTTG+GGG | - | 10836:4279-4298 | MS.gene66498:intron | 20.0% |
| !!! | ACGATTTTTAAAACAATTCT+TGG | - | 10836:7761-7780 | MS.gene66498:CDS | 20.0% |
| !!! | AGAGTGAAATTTCATTTTAT+AGG | - | 10836:4081-4100 | MS.gene66498:intron | 20.0% |
| !!! | CACATTTTTTTGCATATTTT+GGG | - | 10836:4278-4297 | MS.gene66498:intron | 20.0% |
| !!! | CATTATAAATGGTTTGTATA+TGG | - | 10836:7494-7513 | MS.gene66498:intron | 20.0% |
| !!! | TAAATTAAACTTAGCTTGTA+GGG | - | 10836:7464-7483 | MS.gene66498:intron | 20.0% |
| !!! | TCATTAATTTATCCTTTTAC+TGG | - | 10836:6828-6847 | MS.gene66498:intron | 20.0% |
| !!! | TTTACTTGAATTGTTGTTTT+TGG | - | 10836:3643-3662 | MS.gene66498:intron | 20.0% |
| !!! | TTTTTCTCAATTTAGATGTA+GGG | - | 10836:4689-4708 | MS.gene66498:intron | 20.0% |
| !!! | TTTTTGCTATTAATTTCAGA+GGG | + | 10836:7202-7221 | MS.gene66498:intergenic | 20.0% |
| !!! | TTTTTTCTCAATTTAGATGT+AGG | - | 10836:4688-4707 | MS.gene66498:intron | 20.0% |
| !!! | TTTTTTGCTATTAATTTCAG+AGG | + | 10836:7203-7222 | MS.gene66498:intergenic | 20.0% |
| ! | AATCTATAAATCACCTTTGT+AGG | + | 10836:7418-7437 | MS.gene66498:intergenic | 25.0% |
| ! | ACAAACCATTTATAATGATG+CGG | + | 10836:7491-7510 | MS.gene66498:intergenic | 25.0% |
| ! | ACAAATTAAGAACCAAATAG+AGG | - | 10836:6238-6257 | MS.gene66498:intron | 25.0% |
| ! | ACTTAAACTAATGTCAAAAG+AGG | - | 10836:4177-4196 | MS.gene66498:CDS | 25.0% |
| ! | ATATACAAGTGCATCTAAAT+AGG | + | 10836:5170-5189 | MS.gene66498:intergenic | 25.0% |
| ! | ATTTAAACTTAGAAGAGTTG+TGG | - | 10836:5358-5377 | MS.gene66498:CDS | 25.0% |
| ! | ATTTGTATGAATTAGTGTCT+AGG | - | 10836:3480-3499 | MS.gene66498:intron | 25.0% |
| ! | CCAAAATATGCAAAAAAATG+TGG | + | 10836:4280-4299 | MS.gene66498:intergenic | 25.0% |
| ! | CTTAAAAAAATTGTATGTGG+AGG | - | 10836:7611-7630 | MS.gene66498:intron | 25.0% |
| ! | GTAGAAATGATAATCAATGA+GGG | - | 10836:4561-4580 | MS.gene66498:CDS | 25.0% |
| ! | TAGAAATGATAATCAATGAG+GGG | - | 10836:4562-4581 | MS.gene66498:CDS | 25.0% |
| ! | TATACAAGTGCATCTAAATA+GGG | + | 10836:5169-5188 | MS.gene66498:intergenic | 25.0% |
| ! | TGGCAAAGATAATAATAAGT+TGG | + | 10836:5665-5684 | MS.gene66498:intergenic | 25.0% |
| ! | TGTAGAAATGATAATCAATG+AGG | - | 10836:4560-4579 | MS.gene66498:CDS | 25.0% |
| ! | TTACTTATTCTTCATGTACA+AGG | + | 10836:6335-6354 | MS.gene66498:intergenic | 25.0% |
| ! | TTGTTTGTGAATTAGTTATG+TGG | - | 10836:3717-3736 | MS.gene66498:intron | 25.0% |
| ! | TTTGGTGAATTAGTTATGTA+GGG | - | 10836:3583-3602 | MS.gene66498:intron | 25.0% |
| !! | ATGGAGATAATTTTCGTTTT+AGG | - | 10836:7035-7054 | MS.gene66498:CDS | 25.0% |
| !! | GTTTAAGCATTTTTATTCCA+CGG | - | 10836:4233-4252 | MS.gene66498:CDS | 25.0% |
| !! | GTTTATTGTTTCTCAAAACT+GGG | + | 10836:5024-5043 | MS.gene66498:intergenic | 25.0% |
| !! | TAAGTAAAAACACAAGTTGA+TGG | + | 10836:5685-5704 | MS.gene66498:intergenic | 25.0% |
| !! | TAGTGAGAAGGTATAAAAAT+TGG | - | 10836:7247-7266 | MS.gene66498:CDS | 25.0% |
| !! | TTTAAGCATTTTTATTCCAC+GGG | - | 10836:4234-4253 | MS.gene66498:CDS | 25.0% |
| !! | TTTACTTGAATCACTGTTTT+TGG | - | 10836:3565-3584 | MS.gene66498:intron | 25.0% |
| !! | TTTATTGTTTCTCAAAACTG+GGG | + | 10836:5023-5042 | MS.gene66498:intergenic | 25.0% |
| !! | TTTTCTCAATTTAGATGTAG+GGG | - | 10836:4690-4709 | MS.gene66498:intron | 25.0% |
| !! | TTTTGGTGAATTAGTTATGT+AGG | - | 10836:3582-3601 | MS.gene66498:intron | 25.0% |
| !! | TTTTTCTTCATCATTTGCAA+GGG | + | 10836:6967-6986 | MS.gene66498:intergenic | 25.0% |
| !!! | ATCTGTTTTTTTTGTAAACC+CGG | - | 10836:4781-4800 | MS.gene66498:intron | 25.0% |
| !!! | ATGTTCTAGTTTCTTGATTA+GGG | - | 10836:7712-7731 | MS.gene66498:intron | 25.0% |
| !!! | CCACATTTTTTTGCATATTT+TGG | - | 10836:4277-4296 | MS.gene66498:intron | 25.0% |
| !!! | CTCCACATACAATTTTTTTA+AGG | + | 10836:7613-7632 | MS.gene66498:intergenic | 25.0% |
| !!! | GTAAATTAAACTTAGCTTGT+AGG | - | 10836:7463-7482 | MS.gene66498:intron | 25.0% |
| !!! | TATGTTCTAGTTTCTTGATT+AGG | - | 10836:7711-7730 | MS.gene66498:intron | 25.0% |
| !!! | TTCTTCATTTGTTCCTTTTT+TGG | - | 10836:6023-6042 | MS.gene66498:intron | 25.0% |
| !!! | TTGCTTGTTGTTACATAATT+GGG | - | 10836:4049-4068 | MS.gene66498:intron | 25.0% |
| !!! | TTTATCTTTTTGGTTGTGTA+CGG | - | 10836:4614-4633 | MS.gene66498:intron | 25.0% |
| !!! | TTTGCTTGTTGTTACATAAT+TGG | - | 10836:4048-4067 | MS.gene66498:intron | 25.0% |
| !!! | TTTGTGTTTTTGTTACAGAA+TGG | - | 10836:3274-3293 | MS.gene66498:intron | 25.0% |
| !!! | TTTTGTTTTGTTACGAGTAT+AGG | - | 10836:6710-6729 | MS.gene66498:intron | 25.0% |
| AAAAAAATGTGGGAAGTTTG+TGG | + | 10836:4269-4288 | None:intergenic | 30.0% | |
| AAAAGGAGAAGTTGAATGAA+AGG | - | 10836:6561-6580 | MS.gene66498:intron | 30.0% | |
| AAACAATCTGTATGTTGTTG+AGG | - | 10836:5533-5552 | MS.gene66498:CDS | 30.0% | |
| AAAGATACAACCACAATAGT+TGG | - | 10836:6176-6195 | MS.gene66498:intron | 30.0% | |
| AACAATCTGTATGTTGTTGA+GGG | - | 10836:5534-5553 | MS.gene66498:CDS | 30.0% | |
| AACAGTACCTATAAGTGAAT+TGG | + | 10836:6078-6097 | MS.gene66498:intergenic | 30.0% | |
| AACTATTGTGGTTGTATCTT+TGG | + | 10836:6177-6196 | MS.gene66498:intergenic | 30.0% | |
| AAGTTATAGTTCATGTGAAC+CGG | - | 10836:5130-5149 | MS.gene66498:intron | 30.0% | |
| AATCATATGAATAGCAGAAG+AGG | - | 10836:4973-4992 | MS.gene66498:CDS | 30.0% | |
| ACAAAAAGATATCCAATGCA+AGG | - | 10836:5741-5760 | MS.gene66498:CDS | 30.0% | |
| ACACCATCATTAACAATCTT+AGG | + | 10836:3382-3401 | MS.gene66498:intergenic | 30.0% | |
| ACAGTACCTATAAGTGAATT+GGG | + | 10836:6077-6096 | MS.gene66498:intergenic | 30.0% | |
| ACTGAACCAAATTTATGGTT+CGG | - | 10836:4729-4748 | MS.gene66498:intron | 30.0% | |
| AGTTTCTTGATTAGGGAAAT+TGG | - | 10836:7719-7738 | MS.gene66498:intron | 30.0% | |
| ATACAAGTGCATCTAAATAG+GGG | + | 10836:5168-5187 | MS.gene66498:intergenic | 30.0% | |
| ATCATATGAATAGCAGAAGA+GGG | - | 10836:4974-4993 | MS.gene66498:CDS | 30.0% | |
| CAAAAAGATATCCAATGCAA+GGG | - | 10836:5742-5761 | MS.gene66498:CDS | 30.0% | |
| CAAACCATTTATAATGATGC+GGG | + | 10836:7490-7509 | MS.gene66498:intergenic | 30.0% | |
| CATGAACTGAACCAAATTTA+TGG | - | 10836:4724-4743 | MS.gene66498:intron | 30.0% | |
| CCTCTGCAATTATCAAAATA+GGG | + | 10836:5808-5827 | MS.gene66498:intergenic | 30.0% | |
| GGATCTTATTAACATACTAG+AGG | - | 10836:5763-5782 | MS.gene66498:intron | 30.0% | |
| GGTTCAATACGATTCAAAAT+CGG | - | 10836:4802-4821 | MS.gene66498:intron | 30.0% | |
| GTTCATTGCTTAGCAATTAT+TGG | - | 10836:4303-4322 | MS.gene66498:intron | 30.0% | |
| GTTTCTTGATTAGGGAAATT+GGG | - | 10836:7720-7739 | MS.gene66498:intron | 30.0% | |
| TAATTTCAACCCAGAATTGA+AGG | + | 10836:4912-4931 | MS.gene66498:intergenic | 30.0% | |
| TATCTTCCCAATTCACTTAT+AGG | - | 10836:6068-6087 | MS.gene66498:intron | 30.0% | |
| TATGAAACACAAACACCTTT+GGG | - | 10836:4382-4401 | MS.gene66498:CDS | 30.0% | |
| TCATGCATATTGTTGCAAAA+TGG | - | 10836:7575-7594 | MS.gene66498:intron | 30.0% | |
| TCCTCTGCAATTATCAAAAT+AGG | + | 10836:5809-5828 | MS.gene66498:intergenic | 30.0% | |
| TCTCCTAAGATTGTTAATGA+TGG | - | 10836:3376-3395 | MS.gene66498:intron | 30.0% | |
| TGATTTAAGAACCTCGTATT+TGG | + | 10836:7558-7577 | MS.gene66498:intergenic | 30.0% | |
| TGCAGAACAAGATTATGAAA+AGG | - | 10836:6544-6563 | MS.gene66498:intron | 30.0% | |
| TTTCTTGATTAGGGAAATTG+GGG | - | 10836:7721-7740 | MS.gene66498:intron | 30.0% | |
| ! | ATTTTGAATCGTATTGAACC+GGG | + | 10836:4802-4821 | MS.gene66498:intergenic | 30.0% |
| ! | CTCATATTTTCTTCACCTTT+AGG | - | 10836:6860-6879 | MS.gene66498:intron | 30.0% |
| ! | CTTTTTCTTCATCATTTGCA+AGG | + | 10836:6968-6987 | MS.gene66498:intergenic | 30.0% |
| ! | GATTTTGAATCGTATTGAAC+CGG | + | 10836:4803-4822 | MS.gene66498:intergenic | 30.0% |
| ! | GCCATGCAAACAATTTTTAA+GGG | + | 10836:6295-6314 | MS.gene66498:intergenic | 30.0% |
| ! | GGTTTATTGTTTCTCAAAAC+TGG | + | 10836:5025-5044 | MS.gene66498:intergenic | 30.0% |
| ! | TGATTTGCAGAGAAGTTAAA+AGG | + | 10836:6674-6693 | MS.gene66498:intergenic | 30.0% |
| ! | TGCCATGCAAACAATTTTTA+AGG | + | 10836:6296-6315 | MS.gene66498:intergenic | 30.0% |
| !! | AAAACATTAGCCTTCAATTC+TGG | - | 10836:4899-4918 | MS.gene66498:CDS | 30.0% |
| !! | AAACATTAGCCTTCAATTCT+GGG | - | 10836:4900-4919 | MS.gene66498:CDS | 30.0% |
| !! | ATTTAATTTGTCCGAGTGTA+AGG | - | 10836:3672-3691 | MS.gene66498:intron | 30.0% |
| !! | ATTTGATTTGTCTGAGTTCA+GGG | - | 10836:3534-3553 | MS.gene66498:intron | 30.0% |
| !! | CCATGCAAACAATTTTTAAG+GGG | + | 10836:6294-6313 | MS.gene66498:intergenic | 30.0% |
| !! | TAAATTTGTTGAAGTCTCAC+TGG | - | 10836:7654-7673 | MS.gene66498:intron | 30.0% |
| !! | TATTTGATTTGTCTGAGTTC+AGG | - | 10836:3533-3552 | MS.gene66498:intron | 30.0% |
| !! | TGAGAATATTGGTGCTAAAT+TGG | - | 10836:3878-3897 | MS.gene66498:intron | 30.0% |
| !! | TGCTTGTTGTTACATAATTG+GGG | - | 10836:4050-4069 | MS.gene66498:intron | 30.0% |
| !! | TTTAATTTGTCCGAGTGTAA+GGG | - | 10836:3673-3692 | MS.gene66498:intron | 30.0% |
| !!! | TTGTTCCTTTTTTGGTTTAG+CGG | - | 10836:6031-6050 | MS.gene66498:intron | 30.0% |
| AAATCTTAGACCCTTACACT+CGG | + | 10836:3686-3705 | MS.gene66498:intergenic | 35.0% | |
| AATTGTATGTGGAGGATGTT+AGG | - | 10836:7619-7638 | MS.gene66498:intron | 35.0% | |
| ACTGAACCGAACCATAAATT+TGG | + | 10836:4738-4757 | MS.gene66498:intergenic | 35.0% | |
| AGAAGATGGGAATGAAGAAA+TGG | + | 10836:3060-3079 | MS.gene66498:intergenic | 35.0% | |
| ATGAAGATTTGATGTCTGCT+GGG | - | 10836:7383-7402 | MS.gene66498:intron | 35.0% | |
| CAAATCTTCATATTTGCCAG+TGG | + | 10836:7374-7393 | MS.gene66498:intergenic | 35.0% | |
| CAATAAGAAACACACCTCTT+TGG | + | 10836:3413-3432 | MS.gene66498:intergenic | 35.0% | |
| CATACGAGTGGTCATATATA+AGG | - | 10836:6444-6463 | MS.gene66498:intron | 35.0% | |
| CCCCTTAAAAATTGTTTGCA+TGG | - | 10836:6291-6310 | MS.gene66498:intron | 35.0% | |
| CTATGAAACACAAACACCTT+TGG | - | 10836:4381-4400 | MS.gene66498:CDS | 35.0% | |
| CTTGATACGAAACTTTGACT+TGG | - | 10836:7869-7888 | MS.gene66498:intron | 35.0% | |
| CTTGCAGTTCTCAAATTCAA+CGG | + | 10836:5619-5638 | MS.gene66498:intergenic | 35.0% | |
| GAGTTGCATTTCAACAAAGA+TGG | - | 10836:3158-3177 | MS.gene66498:intron | 35.0% | |
| GCAAAAAATGCTGGTGTAAA+TGG | - | 10836:7215-7234 | MS.gene66498:CDS | 35.0% | |
| GGATATTGAACAAGAAGCTT+TGG | - | 10836:5826-5845 | MS.gene66498:intron | 35.0% | |
| GTATGCTGCATACATACATT+TGG | + | 10836:6429-6448 | MS.gene66498:intergenic | 35.0% | |
| GTTAATAAGATCCCTTGCAT+TGG | + | 10836:5756-5775 | MS.gene66498:intergenic | 35.0% | |
| TAAGCATTCACACACATAGA+AGG | + | 10836:7921-7940 | MS.gene66498:intergenic | 35.0% | |
| TAATTTCAGAGGGTAGCTAA+GGG | + | 10836:7192-7211 | MS.gene66498:intergenic | 35.0% | |
| TATGAAGATTTGATGTCTGC+TGG | - | 10836:7382-7401 | MS.gene66498:intron | 35.0% | |
| TCAAGATGGCAATATCATCA+AGG | + | 10836:5937-5956 | MS.gene66498:intergenic | 35.0% | |
| TCACTGTCTGTAACAAAGTA+GGG | + | 10836:5588-5607 | MS.gene66498:intergenic | 35.0% | |
| TCATATGAATAGCAGAAGAG+GGG | - | 10836:4975-4994 | MS.gene66498:CDS | 35.0% | |
| TGTTTGCATTTGCGTTCAAA+AGG | - | 10836:3836-3855 | MS.gene66498:intron | 35.0% | |
| TTAATTTCAGAGGGTAGCTA+AGG | + | 10836:7193-7212 | MS.gene66498:intergenic | 35.0% | |
| TTAGCACCAATATTCTCAAC+CGG | + | 10836:3876-3895 | MS.gene66498:intergenic | 35.0% | |
| TTATAAACCTCCTGTCAAGA+TGG | + | 10836:5951-5970 | MS.gene66498:intergenic | 35.0% | |
| TTATAATTAAAACGCGACGC+AGG | - | 10836:7142-7161 | MS.gene66498:intron | 35.0% | |
| TTGGAGTTATGCATAACGTT+AGG | - | 10836:6382-6401 | MS.gene66498:intron | 35.0% | |
| TTTGTTGAAATGCAACTCCT+TGG | + | 10836:3156-3175 | MS.gene66498:intergenic | 35.0% | |
| ! | ATTTTATAGGTTGTTGCAGC+AGG | - | 10836:4094-4113 | MS.gene66498:intron | 35.0% |
| ! | CTGTGTTGTTGTTGAGATAA+AGG | - | 10836:8082-8101 | MS.gene66498:CDS | 35.0% |
| ! | CTTGTTGTGAACAAACTTAG+AGG | - | 10836:5854-5873 | MS.gene66498:intron | 35.0% |
| ! | TATAGGTACTGTTATCAGAG+AGG | - | 10836:6085-6104 | MS.gene66498:intron | 35.0% |
| ! | TCTCACTGGACTTTTAATGT+GGG | - | 10836:7668-7687 | MS.gene66498:intron | 35.0% |
| !! | AACTACTACCTCTGTTGTTT+TGG | - | 10836:3944-3963 | MS.gene66498:CDS | 35.0% |
| !! | CAAAGGTGTTTGTGTTTCAT+AGG | + | 10836:4383-4402 | MS.gene66498:intergenic | 35.0% |
| !! | GTTTTGTTACGAGTATAGGT+TGG | - | 10836:6714-6733 | MS.gene66498:intron | 35.0% |
| !! | TCTTATTGCAGAAGGTGTTA+AGG | - | 10836:3974-3993 | MS.gene66498:CDS | 35.0% |
| !! | TGCAAACAATTTTTAAGGGG+TGG | + | 10836:6291-6310 | MS.gene66498:intergenic | 35.0% |
| !! | TTGAGTAAGGTTGGTAGAAA+GGG | - | 10836:5477-5496 | MS.gene66498:intron | 35.0% |
| !! | TTTTGATGTGGGGTGTTTAA+GGG | - | 10836:3612-3631 | MS.gene66498:intron | 35.0% |
| !!! | CCCTATTTTGATAATTGCAG+AGG | - | 10836:5805-5824 | MS.gene66498:intron | 35.0% |
| !!! | TAGGGTGTTTGTTTTGATGT+GGG | - | 10836:3601-3620 | MS.gene66498:intron | 35.0% |
| !!! | TGGAGTGTTTGTTTTGATGT+GGG | - | 10836:3737-3756 | MS.gene66498:CDS | 35.0% |
| AAGAGAGGGAAACCTCTATT+TGG | + | 10836:6253-6272 | MS.gene66498:intergenic | 40.0% | |
| ACAAACTGAGACAGAACTCA+AGG | - | 10836:6740-6759 | MS.gene66498:intron | 40.0% | |
| ACCAACCGCTAAACCAAAAA+AGG | + | 10836:6039-6058 | MS.gene66498:intergenic | 40.0% | |
| ACGATTCAAAATCGGTGAAC+TGG | - | 10836:4810-4829 | MS.gene66498:intron | 40.0% | |
| ACTGAAGATTGCAGCACTTA+AGG | - | 10836:5880-5899 | MS.gene66498:intron | 40.0% | |
| ACTTCCATCACCAACTATTG+TGG | + | 10836:6189-6208 | MS.gene66498:intergenic | 40.0% | |
| AGAACAACATTCCTTCCCTT+AGG | + | 10836:3340-3359 | MS.gene66498:intergenic | 40.0% | |
| AGGCAGAAACATGCACAATA+AGG | + | 10836:7793-7812 | MS.gene66498:intergenic | 40.0% | |
| ATGATTGTGAATAACCCACC+TGG | + | 10836:3202-3221 | MS.gene66498:intergenic | 40.0% | |
| CAACATGTCTGCATCATGTT+AGG | - | 10836:5298-5317 | MS.gene66498:CDS | 40.0% | |
| CGTTGAATTTGAGAACTGCA+AGG | - | 10836:5617-5636 | MS.gene66498:CDS | 40.0% | |
| CTAGAGGACGCAATTAGAAA+CGG | - | 10836:5779-5798 | MS.gene66498:intron | 40.0% | |
| CTCACTGTCTGTAACAAAGT+AGG | + | 10836:5589-5608 | MS.gene66498:intergenic | 40.0% | |
| GAAAGGATTGCAAAACTGTC+TGG | - | 10836:6578-6597 | MS.gene66498:intron | 40.0% | |
| GAGCTTATCGAACCAGTAAA+AGG | + | 10836:6843-6862 | MS.gene66498:intergenic | 40.0% | |
| GATGATATTGCCATCTTGAC+AGG | - | 10836:5938-5957 | MS.gene66498:intron | 40.0% | |
| GCTAAGCAATGTAATCCCAA+AGG | + | 10836:4352-4371 | MS.gene66498:intergenic | 40.0% | |
| GGTAGGAAATATGATAGCTG+AGG | - | 10836:5452-5471 | MS.gene66498:intron | 40.0% | |
| GGTTGTGTACGGATAAATGA+AGG | - | 10836:4625-4644 | MS.gene66498:intron | 40.0% | |
| GTTGTTCTTGAGAGCAAGTA+TGG | - | 10836:3352-3371 | MS.gene66498:intron | 40.0% | |
| TAAGCATTCACACGCATAGA+AGG | + | 10836:7813-7832 | MS.gene66498:intergenic | 40.0% | |
| TACAATACCCTCTTCAACAG+CGG | + | 10836:6886-6905 | MS.gene66498:intergenic | 40.0% | |
| TACTCCTTGAACACATCTGT+GGG | - | 10836:4524-4543 | MS.gene66498:intron | 40.0% | |
| TATAACACACACACACACAC+AGG | - | 10836:5241-5260 | MS.gene66498:CDS | 40.0% | |
| TATGGATATAATGCTGCCAC+TGG | - | 10836:7355-7374 | MS.gene66498:intron | 40.0% | |
| TCGCTTTGTAACTGCTTCTT+GGG | + | 10836:6213-6232 | MS.gene66498:intergenic | 40.0% | |
| TCTTTGCTTCAACATGCCTT+AGG | - | 10836:4501-4520 | MS.gene66498:intron | 40.0% | |
| TGCCAAATCATTTGTCTTGG+CGG | + | 10836:3916-3935 | MS.gene66498:intergenic | 40.0% | |
| TGCTAAATTGGTTAGACAGG+CGG | - | 10836:3890-3909 | MS.gene66498:intron | 40.0% | |
| TGGCAATATCATCAAGGTAC+TGG | + | 10836:5931-5950 | MS.gene66498:intergenic | 40.0% | |
| TGGGAATGAAGAAATGGAAG+CGG | + | 10836:3054-3073 | MS.gene66498:intergenic | 40.0% | |
| TGGGATCATTGATCCTACAA+AGG | - | 10836:7402-7421 | MS.gene66498:intron | 40.0% | |
| TGTGAACAAGCTTGCAGATT+TGG | - | 10836:3297-3316 | MS.gene66498:intron | 40.0% | |
| TGTTGAGATAAAGGAACCTG+AGG | - | 10836:8091-8110 | MS.gene66498:CDS | 40.0% | |
| TTGCATTTGCGTTCAAAAGG+TGG | - | 10836:3839-3858 | MS.gene66498:intron | 40.0% | |
| TTGGTTTCGTACCAAATACG+AGG | - | 10836:7544-7563 | MS.gene66498:intron | 40.0% | |
| TTTGCTCAGACTTGCATCAA+AGG | - | 10836:6923-6942 | MS.gene66498:intron | 40.0% | |
| ! | AACAAGCTTGCAGATTTGGT+TGG | - | 10836:3301-3320 | MS.gene66498:intron | 40.0% |
| ! | ATAGGGGTGTGCATAAAAAC+CGG | + | 10836:5152-5171 | MS.gene66498:intergenic | 40.0% |
| ! | ATTTTTATTCCACGGGCTTC+TGG | - | 10836:4241-4260 | MS.gene66498:CDS | 40.0% |
| ! | GTCTCACTGGACTTTTAATG+TGG | - | 10836:7667-7686 | MS.gene66498:intron | 40.0% |
| ! | TATGAAGCACTAACGCCTTT+GGG | - | 10836:4334-4353 | MS.gene66498:intron | 40.0% |
| ! | TGGTGCTAAATTGGTTAGAC+AGG | - | 10836:3887-3906 | MS.gene66498:intron | 40.0% |
| !! | ACAACCACAATAGTTGGTGA+TGG | - | 10836:6182-6201 | MS.gene66498:intron | 40.0% |
| !! | ACACAAACACCTTTGGGATT+AGG | - | 10836:4388-4407 | MS.gene66498:CDS | 40.0% |
| !! | ATGTGTTCAAGGAGTACCTA+AGG | + | 10836:4520-4539 | MS.gene66498:intergenic | 40.0% |
| !! | ATTTTTAAGGGGTGGAGAGA+CGG | + | 10836:6283-6302 | MS.gene66498:intergenic | 40.0% |
| !! | GATTTGGTTGGTGTTACTCT+TGG | - | 10836:3313-3332 | MS.gene66498:intron | 40.0% |
| !! | GTTGAAGAGGGTATTGTAGT+TGG | - | 10836:6888-6907 | MS.gene66498:intron | 40.0% |
| !! | GTTGAGTAAGGTTGGTAGAA+AGG | - | 10836:5476-5495 | MS.gene66498:intron | 40.0% |
| !! | GTTTTGATGTGGGGTGTTTA+AGG | - | 10836:3611-3630 | MS.gene66498:intron | 40.0% |
| !! | GTTTTGATGTGGGGTGTTTA+GGG | - | 10836:3611-3630 | MS.gene66498:intron | 40.0% |
| !!! | AGGGTGTTTGTTTTGATGTG+GGG | - | 10836:3602-3621 | MS.gene66498:intron | 40.0% |
| !!! | GGAGTGTTTGTTTTGATGTG+GGG | - | 10836:3738-3757 | MS.gene66498:CDS | 40.0% |
| !!! | GTAGGGTGTTTGTTTTGATG+TGG | - | 10836:3600-3619 | MS.gene66498:intron | 40.0% |
| !!! | GTGGAGTGTTTGTTTTGATG+TGG | - | 10836:3736-3755 | MS.gene66498:CDS | 40.0% |
| !!! | TCCTTTTTTGGTTTAGCGGT+TGG | - | 10836:6035-6054 | MS.gene66498:intron | 40.0% |
| !!! | TGTTTTGATGTGGGGTGTTT+AGG | - | 10836:3610-3629 | MS.gene66498:intron | 40.0% |
| AAAGCTGGGAATGAGGTTCT+AGG | - | 10836:6128-6147 | MS.gene66498:intron | 45.0% | |
| AATTAAAACGCGACGCAGGT+TGG | - | 10836:7146-7165 | MS.gene66498:intron | 45.0% | |
| ACCTTGAGCCAAAACAACAG+AGG | + | 10836:3955-3974 | MS.gene66498:intergenic | 45.0% | |
| ACTCCTTGAACACATCTGTG+GGG | - | 10836:4525-4544 | MS.gene66498:intron | 45.0% | |
| ACTGTTATCAGAGAGGAGGT+TGG | - | 10836:6092-6111 | MS.gene66498:intron | 45.0% | |
| AGACGCTCTTAACGCTACAA+AGG | - | 10836:6782-6801 | MS.gene66498:intron | 45.0% | |
| AGGATTGCAAAACTGTCTGG+TGG | - | 10836:6581-6600 | MS.gene66498:intron | 45.0% | |
| AGGGCCCGCATCATTATAAA+TGG | - | 10836:7483-7502 | MS.gene66498:intron | 45.0% | |
| ATACCACGTGTGATAAGCAC+AGG | + | 10836:4127-4146 | MS.gene66498:intergenic | 45.0% | |
| CACCTGGAGTTTCTTGATAG+CGG | + | 10836:3186-3205 | MS.gene66498:intergenic | 45.0% | |
| CAGAAGAGGGGTTGTGAAAT+GGG | - | 10836:4987-5006 | MS.gene66498:CDS | 45.0% | |
| CTAACCACCTGGACAAGATT+AGG | + | 10836:8011-8030 | MS.gene66498:intergenic | 45.0% | |
| CTCGCTTTGTAACTGCTTCT+TGG | + | 10836:6214-6233 | MS.gene66498:intergenic | 45.0% | |
| CTTAGACAAAGCTGGGAATG+AGG | - | 10836:6121-6140 | MS.gene66498:intron | 45.0% | |
| GAATGAAGAAATGGAAGCGG+AGG | + | 10836:3051-3070 | MS.gene66498:intergenic | 45.0% | |
| GAGACAAAGCCTAATCCCAA+AGG | + | 10836:4400-4419 | MS.gene66498:intergenic | 45.0% | |
| GAGGATCCGGTTGAGAATAT+TGG | - | 10836:3867-3886 | MS.gene66498:intron | 45.0% | |
| GATATTGCCATCTTGACAGG+AGG | - | 10836:5941-5960 | MS.gene66498:intron | 45.0% | |
| GCCTGCCAAATCATTTGTCT+TGG | + | 10836:3919-3938 | MS.gene66498:intergenic | 45.0% | |
| GCCTTAGCTTAGACAAAGCT+GGG | - | 10836:6114-6133 | MS.gene66498:intron | 45.0% | |
| GCTATCAAGAAACTCCAGGT+GGG | - | 10836:3185-3204 | MS.gene66498:intron | 45.0% | |
| GGATAGTGAATTGGCTGATG+TGG | - | 10836:5401-5420 | MS.gene66498:CDS | 45.0% | |
| GTACTCCTTGAACACATCTG+TGG | - | 10836:4523-4542 | MS.gene66498:intron | 45.0% | |
| GTATGTATGCAGCATACGAG+TGG | - | 10836:6432-6451 | MS.gene66498:intron | 45.0% | |
| GTTGTGGTTGTGTGAATTGC+AGG | - | 10836:5374-5393 | MS.gene66498:CDS | 45.0% | |
| GTTGTGTGAATTGCAGGTTG+AGG | - | 10836:5380-5399 | MS.gene66498:CDS | 45.0% | |
| TAACCCCACAGATGTGTTCA+AGG | + | 10836:4531-4550 | MS.gene66498:intergenic | 45.0% | |
| TACCACGTGTGATAAGCACA+GGG | + | 10836:4126-4145 | MS.gene66498:intergenic | 45.0% | |
| TAGTGCAGGGAACAATCATG+AGG | - | 10836:5431-5450 | MS.gene66498:intron | 45.0% | |
| TCCAACGACGATACGAGATA+TGG | - | 10836:7337-7356 | MS.gene66498:intron | 45.0% | |
| TCCATATCTCGTATCGTCGT+TGG | + | 10836:7341-7360 | MS.gene66498:intergenic | 45.0% | |
| TTACTCTTGGTCCTAAGGGA+AGG | - | 10836:3326-3345 | MS.gene66498:intron | 45.0% | |
| TTCCGCTATCAAGAAACTCC+AGG | - | 10836:3181-3200 | MS.gene66498:intron | 45.0% | |
| TTCTGCGAGTGGAAGAAGAT+GGG | + | 10836:3073-3092 | MS.gene66498:intergenic | 45.0% | |
| TTGCGTTCAAAAGGTGGAGT+TGG | - | 10836:3845-3864 | MS.gene66498:intron | 45.0% | |
| TTTCTGCGAGTGGAAGAAGA+TGG | + | 10836:3074-3093 | MS.gene66498:intergenic | 45.0% | |
| ! | ACAAATGATTTGGCAGGCGA+TGG | - | 10836:3921-3940 | MS.gene66498:CDS | 45.0% |
| ! | ACTGGTAGTTTTTCTGCGAG+TGG | + | 10836:3084-3103 | MS.gene66498:intergenic | 45.0% |
| ! | AGGTACTGTTATCAGAGAGG+AGG | - | 10836:6088-6107 | MS.gene66498:intron | 45.0% |
| ! | CTATGAAGCACTAACGCCTT+TGG | - | 10836:4333-4352 | MS.gene66498:intron | 45.0% |
| ! | GAAGCATCCTAATCTTGTCC+AGG | - | 10836:8001-8020 | MS.gene66498:CDS | 45.0% |
| ! | GCAGGTTGAGGATAGTGAAT+TGG | - | 10836:5392-5411 | MS.gene66498:CDS | 45.0% |
| ! | GCCAAGACAAATGATTTGGC+AGG | - | 10836:3915-3934 | MS.gene66498:CDS | 45.0% |
| ! | TCCCAGCTTTGTCTAAGCTA+AGG | + | 10836:6118-6137 | MS.gene66498:intergenic | 45.0% |
| ! | TGGCAGTGTTGTTAGTGAGA+AGG | - | 10836:7235-7254 | MS.gene66498:CDS | 45.0% |
| ! | TTTAAGGTTCCGACTCTTCC+TGG | + | 10836:3120-3139 | MS.gene66498:intergenic | 45.0% |
| ! | TTTAGATGTAGGGGTGTGCA+TGG | - | 10836:4699-4718 | MS.gene66498:intron | 45.0% |
| !! | AAAGGGTGTCGTTACACTTG+AGG | - | 10836:5494-5513 | MS.gene66498:intron | 45.0% |
| !! | AGGGTATTGTAGTTGGTGGT+GGG | - | 10836:6895-6914 | MS.gene66498:intron | 45.0% |
| !! | GAAGAGGGTATTGTAGTTGG+TGG | - | 10836:6891-6910 | MS.gene66498:intron | 45.0% |
| !! | GCTCAAGGTCTTATTGCAGA+AGG | - | 10836:3966-3985 | MS.gene66498:CDS | 45.0% |
| !! | GGTGTTACTCTTGGTCCTAA+GGG | - | 10836:3322-3341 | MS.gene66498:intron | 45.0% |
| !! | TGGTGTTACTCTTGGTCCTA+AGG | - | 10836:3321-3340 | MS.gene66498:intron | 45.0% |
| !! | TTTTTAAGGGGTGGAGAGAC+GGG | + | 10836:6282-6301 | MS.gene66498:intergenic | 45.0% |
| !!! | ACCTCTGTTGTTTTGGCTCA+AGG | - | 10836:3951-3970 | MS.gene66498:CDS | 45.0% |
| !!! | AAAAATTGATTTTTTTTTAA+TGG | - | 10836:3235-3254 | MS.gene66498:intron | 5.0% |
| !!! | TTAAAATTTTAAAAACAATT+TGG | + | 10836:5046-5065 | MS.gene66498:intergenic | 5.0% |
| !!! | TTGTTTTTAAAATTTTAAAT+TGG | - | 10836:5048-5067 | MS.gene66498:CDS | 5.0% |
| AAAGGTGGAGTTGGAGGATC+CGG | - | 10836:3854-3873 | MS.gene66498:intron | 50.0% | |
| AAATGGAAGCGGAGGAAGAG+AGG | + | 10836:3043-3062 | MS.gene66498:intergenic | 50.0% | |
| AACCCTGTGCTTATCACACG+TGG | - | 10836:4121-4140 | MS.gene66498:intron | 50.0% | |
| AGAGACGGGGAAAGAAAGAG+AGG | + | 10836:6268-6287 | MS.gene66498:intergenic | 50.0% | |
| ATCTTTGGTGAGCACCACCT+TGG | + | 10836:6162-6181 | MS.gene66498:intergenic | 50.0% | |
| ATGTGGCAGCAGTTAGTGCA+GGG | - | 10836:5418-5437 | MS.gene66498:intron | 50.0% | |
| ATTGCAGCACTTAAGGCTCC+TGG | - | 10836:5887-5906 | MS.gene66498:intron | 50.0% | |
| CCAAGCAACATCTAACCACC+TGG | + | 10836:8022-8041 | MS.gene66498:intergenic | 50.0% | |
| CCAGGTGGTTAGATGTTGCT+TGG | - | 10836:8019-8038 | MS.gene66498:CDS | 50.0% | |
| CGCTATCAAGAAACTCCAGG+TGG | - | 10836:3184-3203 | MS.gene66498:intron | 50.0% | |
| CGTTCAAAAGGTGGAGTTGG+AGG | - | 10836:3848-3867 | MS.gene66498:intron | 50.0% | |
| CTCTTGCGTTCTCCAAATCC+AGG | + | 10836:5908-5927 | MS.gene66498:intergenic | 50.0% | |
| CTTTAGGCCGCTGTTGAAGA+GGG | - | 10836:6876-6895 | MS.gene66498:intron | 50.0% | |
| GAAATGCAACTCCTTGGCCA+TGG | + | 10836:3150-3169 | MS.gene66498:intergenic | 50.0% | |
| GAACCTTAAAGTCTCCGCCA+TGG | - | 10836:3130-3149 | MS.gene66498:intron | 50.0% | |
| GAGACGGGGAAAGAAAGAGA+GGG | + | 10836:6267-6286 | MS.gene66498:intergenic | 50.0% | |
| GAGGGGTTGTGAAATGGGTA+CGG | - | 10836:4992-5011 | MS.gene66498:CDS | 50.0% | |
| GCACTTAAGGCTCCTGGATT+TGG | - | 10836:5893-5912 | MS.gene66498:intron | 50.0% | |
| GCAGAAGAGGGGTTGTGAAA+TGG | - | 10836:4986-5005 | MS.gene66498:CDS | 50.0% | |
| GCAGGGAACAATCATGAGGT+AGG | - | 10836:5435-5454 | MS.gene66498:intron | 50.0% | |
| GCATCCTAATCTTGTCCAGG+TGG | - | 10836:8004-8023 | MS.gene66498:CDS | 50.0% | |
| GCTCAGACTTGCATCAAAGG+TGG | - | 10836:6926-6945 | MS.gene66498:intron | 50.0% | |
| GGCCGCCAAGACAAATGATT+TGG | - | 10836:3911-3930 | MS.gene66498:CDS | 50.0% | |
| GGCCTTAGCTTAGACAAAGC+TGG | - | 10836:6113-6132 | MS.gene66498:intron | 50.0% | |
| TCGTTACACTTGAGGAGGGA+AGG | - | 10836:5502-5521 | MS.gene66498:intron | 50.0% | |
| TTGTCCATAGGGTTGCCAAC+AGG | + | 10836:8122-8141 | MS.gene66498:intergenic | 50.0% | |
| ! | GAGGGCATGCAATTTGATCG+AGG | - | 10836:5552-5571 | MS.gene66498:CDS | 50.0% |
| ! | TGCAAAACTGTCTGGTGGTG+TGG | - | 10836:6586-6605 | MS.gene66498:intron | 50.0% |
| ! | TGGTGGTGTGGCTGTAATTC+AGG | - | 10836:6598-6617 | MS.gene66498:intron | 50.0% |
| !! | GAATGAGGTTCTAGGCACTG+CGG | - | 10836:6136-6155 | MS.gene66498:intron | 50.0% |
| !! | GAGGGTATTGTAGTTGGTGG+TGG | - | 10836:6894-6913 | MS.gene66498:intron | 50.0% |
| !! | GATAGCTGAGGCGTTGAGTA+AGG | - | 10836:5464-5483 | MS.gene66498:intron | 50.0% |
| !! | GGTGTCGTTACACTTGAGGA+GGG | - | 10836:5498-5517 | MS.gene66498:intron | 50.0% |
| !! | TGGTGTCACTGTTGCCAAAG+AGG | - | 10836:3396-3415 | MS.gene66498:intron | 50.0% |
| !! | TTTTAAGGGGTGGAGAGACG+GGG | + | 10836:6281-6300 | MS.gene66498:intergenic | 50.0% |
| ACTCTTCCTGGAGAGAGCGA+CGG | + | 10836:3108-3127 | MS.gene66498:intergenic | 55.0% | |
| ATGCAACTCCTTGGCCATGG+CGG | + | 10836:3147-3166 | MS.gene66498:intergenic | 55.0% | |
| CCTCTTCAACAGCGGCCTAA+AGG | + | 10836:6878-6897 | MS.gene66498:intergenic | 55.0% | |
| CCTTTAGGCCGCTGTTGAAG+AGG | - | 10836:6875-6894 | MS.gene66498:intron | 55.0% | |
| GATGTGGCAGCAGTTAGTGC+AGG | - | 10836:5417-5436 | MS.gene66498:intron | 55.0% | |
| GGAGGAAGAGAGGTTGCATG+AGG | + | 10836:3033-3052 | MS.gene66498:intergenic | 55.0% | |
| TAAAGTCTCCGCCATGGCCA+AGG | - | 10836:3136-3155 | MS.gene66498:intron | 55.0% | |
| TCGCTCTCTCCAGGAAGAGT+CGG | - | 10836:3108-3127 | MS.gene66498:CDS | 55.0% | |
| TGCACCTGTTGGCAACCCTA+TGG | - | 10836:8115-8134 | MS.gene66498:CDS | 55.0% | |
| TTTGTGGTACCAGAAGCCCG+TGG | + | 10836:4253-4272 | MS.gene66498:intergenic | 55.0% | |
| ! | TGGCCATGGCGGAGACTTTA+AGG | + | 10836:3136-3155 | MS.gene66498:intergenic | 55.0% |
| !! | GCTGAGGCGTTGAGTAAGGT+TGG | - | 10836:5468-5487 | MS.gene66498:intron | 55.0% |
| !! | GGGTGTCGTTACACTTGAGG+AGG | - | 10836:5497-5516 | MS.gene66498:intron | 55.0% |
| GAACCTGAGGCTGCACCTGT+TGG | - | 10836:8104-8123 | MS.gene66498:CDS | 60.0% | |
| GCAACGACGCATGTCGGACA+TGG | + | 10836:4422-4441 | MS.gene66498:intergenic | 60.0% | |
| GTCCGACATGCGTCGTTGCA+CGG | - | 10836:4423-4442 | MS.gene66498:intron | 60.0% | |
| TGCCGTGCAACGACGCATGT+CGG | + | 10836:4428-4447 | MS.gene66498:intergenic | 60.0% | |
| TTGCCAACAGGTGCAGCCTC+AGG | + | 10836:8110-8129 | MS.gene66498:intergenic | 60.0% | |
| CCAGTACCGTCGCTCTCTCC+AGG | - | 10836:3099-3118 | MS.gene66498:CDS | 65.0% | |
| CCTGGAGAGAGCGACGGTAC+TGG | + | 10836:3102-3121 | MS.gene66498:intergenic | 65.0% | |
| ! | TCTAGGCACTGCGGCCAAGG+TGG | - | 10836:6145-6164 | MS.gene66498:intron | 65.0% |
| !! | GGTTCTAGGCACTGCGGCCA+AGG | - | 10836:6142-6161 | MS.gene66498:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10836 | gene | 3011 | 8146 | 3011 | ID=MS.gene66498 |
| 10836 | mRNA | 3011 | 8146 | 3011 | ID=MS.gene66498.t1;Parent=MS.gene66498 |
| 10836 | exon | 7955 | 8146 | 7955 | ID=MS.gene66498.t1.exon1;Parent=MS.gene66498.t1 |
| 10836 | CDS | 7955 | 8146 | 7955 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 7740 | 7865 | 7740 | ID=MS.gene66498.t1.exon2;Parent=MS.gene66498.t1 |
| 10836 | CDS | 7740 | 7865 | 7740 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 7162 | 7299 | 7162 | ID=MS.gene66498.t1.exon3;Parent=MS.gene66498.t1 |
| 10836 | CDS | 7162 | 7299 | 7162 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 6959 | 7054 | 6959 | ID=MS.gene66498.t1.exon4;Parent=MS.gene66498.t1 |
| 10836 | CDS | 6959 | 7054 | 6959 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 5519 | 5761 | 5519 | ID=MS.gene66498.t1.exon5;Parent=MS.gene66498.t1 |
| 10836 | CDS | 5519 | 5761 | 5519 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 5195 | 5429 | 5195 | ID=MS.gene66498.t1.exon6;Parent=MS.gene66498.t1 |
| 10836 | CDS | 5195 | 5429 | 5195 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 4898 | 5067 | 4898 | ID=MS.gene66498.t1.exon7;Parent=MS.gene66498.t1 |
| 10836 | CDS | 4898 | 5067 | 4898 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 4538 | 4615 | 4538 | ID=MS.gene66498.t1.exon8;Parent=MS.gene66498.t1 |
| 10836 | CDS | 4538 | 4615 | 4538 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 4354 | 4425 | 4354 | ID=MS.gene66498.t1.exon9;Parent=MS.gene66498.t1 |
| 10836 | CDS | 4354 | 4425 | 4354 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 4171 | 4275 | 4171 | ID=MS.gene66498.t1.exon10;Parent=MS.gene66498.t1 |
| 10836 | CDS | 4171 | 4275 | 4171 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 3901 | 3993 | 3901 | ID=MS.gene66498.t1.exon11;Parent=MS.gene66498.t1 |
| 10836 | CDS | 3901 | 3993 | 3901 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 3734 | 3826 | 3734 | ID=MS.gene66498.t1.exon12;Parent=MS.gene66498.t1 |
| 10836 | CDS | 3734 | 3826 | 3734 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| 10836 | exon | 3011 | 3134 | 3011 | ID=MS.gene66498.t1.exon13;Parent=MS.gene66498.t1 |
| 10836 | CDS | 3011 | 3134 | 3011 | ID=cds.MS.gene66498.t1;Parent=MS.gene66498.t1 |
| Gene Sequence |
| Protein sequence |
