Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008016.t1 | XP_003600968.1 | 98.5 | 340 | 5 | 0 | 1 | 340 | 1 | 340 | 3.10E-175 | 624.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008016.t1 | Q9SIZ2 | 86.1 | 339 | 46 | 1 | 3 | 340 | 6 | 344 | 6.8e-155 | 548.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008016.t1 | B7FKJ0 | 98.5 | 340 | 5 | 0 | 1 | 340 | 1 | 340 | 2.2e-175 | 624.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008016 | MS.gene64519 | PPI |
| MS.gene09852 | MS.gene008016 | PPI |
| MS.gene008016 | MS.gene027802 | PPI |
| MS.gene008016 | MS.gene061898 | PPI |
| MS.gene05791 | MS.gene008016 | PPI |
| MS.gene063366 | MS.gene008016 | PPI |
| MS.gene008016 | MS.gene060216 | PPI |
| MS.gene008016 | MS.gene43614 | PPI |
| MS.gene008016 | MS.gene002675 | PPI |
| MS.gene066163 | MS.gene008016 | PPI |
| MS.gene040581 | MS.gene008016 | PPI |
| MS.gene008016 | MS.gene039110 | PPI |
| MS.gene069130 | MS.gene008016 | PPI |
| MS.gene43604 | MS.gene008016 | PPI |
| MS.gene008016 | MS.gene63721 | PPI |
| MS.gene004357 | MS.gene008016 | PPI |
| MS.gene070896 | MS.gene008016 | PPI |
| MS.gene018560 | MS.gene008016 | PPI |
| MS.gene002676 | MS.gene008016 | PPI |
| MS.gene068593 | MS.gene008016 | PPI |
| MS.gene008016 | MS.gene05792 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008016.t1 | MTR_3g071550 | 98.529 | 340 | 5 | 0 | 1 | 340 | 1 | 340 | 0.0 | 685 |
| MS.gene008016.t1 | MTR_3g071560 | 89.412 | 340 | 36 | 0 | 1 | 340 | 1 | 340 | 0.0 | 583 |
| MS.gene008016.t1 | MTR_3g071540 | 82.647 | 340 | 57 | 1 | 1 | 340 | 1 | 338 | 0.0 | 547 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008016.t1 | AT2G40290 | 85.294 | 340 | 49 | 1 | 2 | 340 | 5 | 344 | 0.0 | 558 |
| MS.gene008016.t1 | AT5G05470 | 78.529 | 340 | 72 | 1 | 2 | 340 | 5 | 344 | 0.0 | 513 |
| MS.gene008016.t1 | AT2G40290 | 92.308 | 221 | 17 | 0 | 2 | 222 | 5 | 225 | 3.35e-143 | 404 |
| MS.gene008016.t1 | AT2G40290 | 92.308 | 221 | 17 | 0 | 2 | 222 | 5 | 225 | 3.35e-143 | 404 |
Find 75 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAACAATGGCTCCGAATT+TGG | 0.141023 | 3.3:-62192735 | None:intergenic |
| CTCCTCAACCAATGAAAATT+AGG | 0.202653 | 3.3:-62191424 | MS.gene008016:CDS |
| TGATGGAGTTATCCACATTA+AGG | 0.320844 | 3.3:-62191372 | MS.gene008016:intron |
| TGGCCTTTGTATCGCAAATA+TGG | 0.324337 | 3.3:-62192235 | MS.gene008016:CDS |
| AACCTTGGACCTCGATTTAG+AGG | 0.340008 | 3.3:-62192375 | MS.gene008016:intron |
| TTGACAGGAGCAAGGAATAT+TGG | 0.344432 | 3.3:-62188812 | MS.gene008016:intron |
| ATTACAGCCATGTCCACTTC+TGG | 0.359907 | 3.3:+62192686 | None:intergenic |
| AGAGTGCTCAAAACCTTATC+AGG | 0.378719 | 3.3:+62191560 | None:intergenic |
| TGGAATGGGCGAGGTTGATC+TGG | 0.384088 | 3.3:-62188464 | MS.gene008016:CDS |
| TCCTCAACCAATGAAAATTA+GGG | 0.406016 | 3.3:-62191423 | MS.gene008016:CDS |
| ATGCGGAAGGCTGAAGCTGC+TGG | 0.416771 | 3.3:-62191237 | MS.gene008016:CDS |
| TACATGCGACATTCCAAATT+CGG | 0.416982 | 3.3:+62192722 | None:intergenic |
| GGACATGGCTGTAATGATTC+AGG | 0.426006 | 3.3:-62192678 | MS.gene008016:CDS |
| GATGGTTCTTCGTGTTGATA+AGG | 0.427509 | 3.3:-62192513 | MS.gene008016:CDS |
| ATCAAGGAAGTTGGTCCTGA+TGG | 0.435503 | 3.3:-62191527 | MS.gene008016:CDS |
| AGTGAAGAGGAAGAAGATAC+TGG | 0.441245 | 3.3:-62188484 | MS.gene008016:CDS |
| TCTTCGTGTTGATAAGGAAA+AGG | 0.441941 | 3.3:-62192507 | MS.gene008016:CDS |
| CACTCTCACGCGTGAAATCA+AGG | 0.449977 | 3.3:-62191543 | MS.gene008016:CDS |
| AGGATCTTTATGTGCACATT+GGG | 0.459464 | 3.3:-62192258 | MS.gene008016:CDS |
| CTTCGTGTTGATAAGGAAAA+GGG | 0.460731 | 3.3:-62192506 | MS.gene008016:CDS |
| ATCTTTATGTGCACATTGGG+TGG | 0.461788 | 3.3:-62192255 | MS.gene008016:CDS |
| TTACAGCCATGTCCACTTCT+GGG | 0.467368 | 3.3:+62192687 | None:intergenic |
| GGGTCGAATCGAACCGGTGA+TGG | 0.469064 | 3.3:-62192531 | MS.gene008016:CDS |
| TTGGTCACTTCTAGCCCATC+AGG | 0.477070 | 3.3:+62191512 | None:intergenic |
| GCGCCATGTTGCTGAAACCT+TGG | 0.480117 | 3.3:-62192390 | MS.gene008016:CDS |
| TGTTGTGGCTGATCCTGATA+AGG | 0.490250 | 3.3:-62191573 | MS.gene008016:CDS |
| CAAAGTGGGTCGAATCGAAC+CGG | 0.517292 | 3.3:-62192537 | MS.gene008016:CDS |
| GGACAATGGTAATGCGATAA+CGG | 0.523163 | 3.3:-62188443 | MS.gene008016:CDS |
| TGAAGAACTGAAGGATGCTC+TGG | 0.533810 | 3.3:-62191471 | MS.gene008016:CDS |
| GAGGAAGAAGATACTGGAAT+GGG | 0.536370 | 3.3:-62188478 | MS.gene008016:CDS |
| TTCAGTTCTTCAGATACAGC+AGG | 0.545065 | 3.3:+62191482 | None:intergenic |
| ATATTCAAACTTGTGAAGAA+AGG | 0.548905 | 3.3:-62192445 | MS.gene008016:CDS |
| GGTGAAGAACATCGCCGACA+TGG | 0.554867 | 3.3:-62192657 | MS.gene008016:CDS |
| TCAAGGAAGTTGGTCCTGAT+GGG | 0.559616 | 3.3:-62191526 | MS.gene008016:CDS |
| TGCTGTATCTGAAGAACTGA+AGG | 0.561463 | 3.3:-62191480 | MS.gene008016:CDS |
| AGAGGAAGAAGATACTGGAA+TGG | 0.562073 | 3.3:-62188479 | MS.gene008016:CDS |
| GAGTGGTAAGCACGTAAAGT+GGG | 0.562262 | 3.3:+62191175 | None:intergenic |
| ACGCGTGAAATCAAGGAAGT+TGG | 0.562357 | 3.3:-62191536 | MS.gene008016:CDS |
| TAGGATCTTTATGTGCACAT+TGG | 0.562653 | 3.3:-62192259 | MS.gene008016:CDS |
| CGAAGCAAAGTACCCAGAAG+TGG | 0.569260 | 3.3:-62192699 | MS.gene008016:CDS |
| TGATTCAGTGCAACTAGCAA+TGG | 0.569971 | 3.3:+62188777 | None:intergenic |
| TTTGCAGGAGGCAATGCGGA+AGG | 0.576765 | 3.3:-62191250 | MS.gene008016:intron |
| TGAGTGGTAAGCACGTAAAG+TGG | 0.581027 | 3.3:+62191174 | None:intergenic |
| CAAGGGTAAACTTTCTGTGA+AGG | 0.587614 | 3.3:-62188743 | MS.gene008016:CDS |
| GTGAAGAACATCGCCGACAT+GGG | 0.587738 | 3.3:-62192656 | MS.gene008016:CDS |
| TACCTCTAAATCGAGGTCCA+AGG | 0.590945 | 3.3:+62192373 | None:intergenic |
| AGAAGATACTGGAATGGGCG+AGG | 0.594274 | 3.3:-62188473 | MS.gene008016:CDS |
| GGTCCAAGGTTTCAGCAACA+TGG | 0.598496 | 3.3:+62192387 | None:intergenic |
| TTACAATCTTGACAGGAGCA+AGG | 0.600614 | 3.3:-62188820 | MS.gene008016:intron |
| TGGCCATATTTGCGATACAA+AGG | 0.604527 | 3.3:+62192232 | None:intergenic |
| CATTGATCTCAGTAAACGCA+GGG | 0.605895 | 3.3:-62192480 | MS.gene008016:CDS |
| CTCGAATACAACAACATCGA+GGG | 0.610805 | 3.3:-62192617 | MS.gene008016:CDS |
| AAAGTACCCAGAAGTGGACA+TGG | 0.612186 | 3.3:-62192693 | MS.gene008016:CDS |
| ACATTGATCTCAGTAAACGC+AGG | 0.620785 | 3.3:-62192481 | MS.gene008016:CDS |
| GTGAGCAGTCTCATCAAAGT+GGG | 0.621649 | 3.3:-62192551 | MS.gene008016:CDS |
| AGGTGATGACGACAGTGAAG+AGG | 0.623072 | 3.3:-62188497 | MS.gene008016:CDS |
| GCAGGCATTCAAAATTGTTG+TGG | 0.630092 | 3.3:-62191588 | MS.gene008016:intron |
| AGTGGTAAGCACGTAAAGTG+GGG | 0.633322 | 3.3:+62191176 | None:intergenic |
| TGTGAGCAGTCTCATCAAAG+TGG | 0.634680 | 3.3:-62192552 | MS.gene008016:CDS |
| TCAACACGAAGAACCATCAC+CGG | 0.639120 | 3.3:+62192518 | None:intergenic |
| AAATGATTAAGACCTTAATG+TGG | 0.640282 | 3.3:+62191360 | None:intergenic |
| GCTACGCGAACAGAATGAAG+AGG | 0.648619 | 3.3:-62188524 | MS.gene008016:CDS |
| GGCGAGGTTGATCTGGACAA+TGG | 0.654514 | 3.3:-62188457 | MS.gene008016:CDS |
| TTAGGGTTACCTCTAAATCG+AGG | 0.654952 | 3.3:+62192366 | None:intergenic |
| GAACAGAATGAAGAGGTCGA+AGG | 0.658906 | 3.3:-62188517 | MS.gene008016:CDS |
| AGATACAGCAGGTACCACCT+TGG | 0.666486 | 3.3:+62191493 | None:intergenic |
| TCAACCAATGAAAATTAGGG+CGG | 0.683860 | 3.3:-62191420 | MS.gene008016:CDS |
| TGATGGGCTAGAAGTGACCA+AGG | 0.684118 | 3.3:-62191510 | MS.gene008016:CDS |
| GTGGTAAGCACGTAAAGTGG+GGG | 0.684133 | 3.3:+62191177 | None:intergenic |
| TACCACTCAGACACTTGACA+AGG | 0.684401 | 3.3:-62191160 | MS.gene008016:intron |
| TACCTTGTCAAGTGTCTGAG+TGG | 0.703341 | 3.3:+62191158 | None:intergenic |
| TGAAACGTAAGCGCCCATGT+CGG | 0.703437 | 3.3:+62192643 | None:intergenic |
| TGTGAAGGAGAAAGTCAGAG+TGG | 0.712598 | 3.3:-62188728 | MS.gene008016:intron |
| TCTCGAATACAACAACATCG+AGG | 0.733290 | 3.3:-62192618 | MS.gene008016:CDS |
| TGGGCTAGAAGTGACCAAGG+TGG | 0.771096 | 3.3:-62191507 | MS.gene008016:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCCAAAAAATTAAAATTA+GGG | + | chr3.3:62188837-62188856 | None:intergenic | 10.0% |
| !!! | TTTTCATAAGTTATATTTTA+TGG | - | chr3.3:62189468-62189487 | MS.gene008016:intron | 10.0% |
| !! | AAATTAAAATGAGTTATGAA+AGG | + | chr3.3:62191715-62191734 | None:intergenic | 15.0% |
| !! | AATGTTATTGTTAAAGTTAT+AGG | - | chr3.3:62191140-62191159 | MS.gene008016:intron | 15.0% |
| !! | CAATCCAAAAAATTAAAATT+AGG | + | chr3.3:62188838-62188857 | None:intergenic | 15.0% |
| !!! | AAAAATCCAATATTTTTTCA+TGG | + | chr3.3:62190757-62190776 | None:intergenic | 15.0% |
| !!! | AAAATCCAATATTTTTTCAT+GGG | + | chr3.3:62190756-62190775 | None:intergenic | 15.0% |
| !!! | AAACCCTAATTTTAATTTTT+TGG | - | chr3.3:62188831-62188850 | MS.gene008016:intron | 15.0% |
| !!! | ATTTTTTCAATTAAGATTAC+AGG | - | chr3.3:62189203-62189222 | MS.gene008016:intron | 15.0% |
| !!! | TTTTTTCAATTAAGATTACA+GGG | - | chr3.3:62189204-62189223 | MS.gene008016:intron | 15.0% |
| !! | AAAGTAAATAACATAAAGCA+TGG | - | chr3.3:62190527-62190546 | MS.gene008016:intron | 20.0% |
| !! | AAATTACTTTCAATAGAAGA+AGG | + | chr3.3:62192316-62192335 | None:intergenic | 20.0% |
| !! | AAGTTTAAACAGTTCAAAAT+CGG | - | chr3.3:62191091-62191110 | MS.gene008016:intron | 20.0% |
| !! | AATAAAGTTCATGATTTAGA+GGG | + | chr3.3:62189554-62189573 | None:intergenic | 20.0% |
| !! | ATAAATTACAGTACATGTTT+AGG | + | chr3.3:62192095-62192114 | None:intergenic | 20.0% |
| !! | ATTAATCACCCTATTTATTT+AGG | + | chr3.3:62191242-62191261 | None:intergenic | 20.0% |
| !! | CAACAATAGTAATATCTATA+AGG | + | chr3.3:62192214-62192233 | None:intergenic | 20.0% |
| !! | CTTATAGATATTACTATTGT+TGG | - | chr3.3:62192212-62192231 | MS.gene008016:intron | 20.0% |
| !! | GTCTTTACATAAATTGAATT+CGG | - | chr3.3:62191972-62191991 | MS.gene008016:intron | 20.0% |
| !! | TGTTAAAAATACTACTTAGT+AGG | + | chr3.3:62192054-62192073 | None:intergenic | 20.0% |
| !!! | ACAAACATTGATTTGATAAT+TGG | - | chr3.3:62190045-62190064 | MS.gene008016:intron | 20.0% |
| !!! | ATATGATATTTGAAGTCTTT+TGG | + | chr3.3:62190469-62190488 | None:intergenic | 20.0% |
| !!! | ATGAAATGTTTTCAATTTGA+TGG | - | chr3.3:62189777-62189796 | MS.gene008016:intron | 20.0% |
| !!! | ATTAGGGTTTTTTCTTAATT+AGG | + | chr3.3:62188821-62188840 | None:intergenic | 20.0% |
| !!! | ATTGAGTTGTTTTAAAAGTT+CGG | - | chr3.3:62191997-62192016 | MS.gene008016:intron | 20.0% |
| !!! | TCATTTTAATTTCCATTTTG+AGG | - | chr3.3:62191723-62191742 | MS.gene008016:intron | 20.0% |
| !!! | TGTTTTAATTGAATTGATTG+TGG | - | chr3.3:62188877-62188896 | MS.gene008016:intron | 20.0% |
| !!! | TTAGGGTTTTTTCTTAATTA+GGG | + | chr3.3:62188820-62188839 | None:intergenic | 20.0% |
| !!! | TTTTTCAATTAAGATTACAG+GGG | - | chr3.3:62189205-62189224 | MS.gene008016:intron | 20.0% |
| ! | AAAAATAAGCTATAAGCTCA+TGG | - | chr3.3:62189299-62189318 | MS.gene008016:intron | 25.0% |
| ! | AAAAATTTACCTCAAAAGCA+TGG | + | chr3.3:62188957-62188976 | None:intergenic | 25.0% |
| ! | AAAATAAGCTATAAGCTCAT+GGG | - | chr3.3:62189300-62189319 | MS.gene008016:intron | 25.0% |
| ! | AAATGATTAAGACCTTAATG+TGG | + | chr3.3:62189809-62189828 | None:intergenic | 25.0% |
| ! | AGTCCAAAACCTAAATAAAT+AGG | - | chr3.3:62191230-62191249 | MS.gene008016:CDS | 25.0% |
| ! | ATAAACCCTATAATACAAAG+CGG | - | chr3.3:62190676-62190695 | MS.gene008016:intron | 25.0% |
| ! | ATAAAGTTCATGATTTAGAG+GGG | + | chr3.3:62189553-62189572 | None:intergenic | 25.0% |
| ! | ATAGAATATTGCAGTTTCTA+GGG | - | chr3.3:62191263-62191282 | MS.gene008016:intron | 25.0% |
| ! | ATATTCAAACTTGTGAAGAA+AGG | - | chr3.3:62188721-62188740 | MS.gene008016:intron | 25.0% |
| ! | CAATAAAGTTCATGATTTAG+AGG | + | chr3.3:62189555-62189574 | None:intergenic | 25.0% |
| ! | GAATCAATAGAAAAACACAA+GGG | - | chr3.3:62192406-62192425 | MS.gene008016:CDS | 25.0% |
| ! | GTCCAAAACCTAAATAAATA+GGG | - | chr3.3:62191231-62191250 | MS.gene008016:CDS | 25.0% |
| ! | TGAAAGGTCAACATTAATAT+TGG | + | chr3.3:62191699-62191718 | None:intergenic | 25.0% |
| ! | TGAATCAATAGAAAAACACA+AGG | - | chr3.3:62192405-62192424 | MS.gene008016:CDS | 25.0% |
| ! | TGACAAAATATGATTTCAGT+TGG | + | chr3.3:62191408-62191427 | None:intergenic | 25.0% |
| ! | TGTCATGTTCTATAATCATT+TGG | - | chr3.3:62189892-62189911 | MS.gene008016:intron | 25.0% |
| ! | TTACTAAACTGAAAAGCTAA+TGG | + | chr3.3:62191949-62191968 | None:intergenic | 25.0% |
| ! | TTGTAACCTTCCAATTAAAT+TGG | + | chr3.3:62190655-62190674 | None:intergenic | 25.0% |
| !! | ATATGTGTCGTTATTATCAT+TGG | + | chr3.3:62191559-62191578 | None:intergenic | 25.0% |
| !! | ATGATCTTTATTTCATCTTC+TGG | + | chr3.3:62189423-62189442 | None:intergenic | 25.0% |
| !! | ATTCATTTGAGTTTATCTAC+CGG | + | chr3.3:62189517-62189536 | None:intergenic | 25.0% |
| !! | ATTTTCATTCAAAGTCCTTT+AGG | - | chr3.3:62192287-62192306 | MS.gene008016:intron | 25.0% |
| !! | TATTTTGTTACAATCTTGAC+AGG | - | chr3.3:62192339-62192358 | MS.gene008016:intron | 25.0% |
| !! | TGATCTTTATTTCATCTTCT+GGG | + | chr3.3:62189422-62189441 | None:intergenic | 25.0% |
| !!! | AAATATTGGATTTTTTCTGC+TGG | - | chr3.3:62190762-62190781 | MS.gene008016:intron | 25.0% |
| !!! | AATATTGGATTTTTTCTGCT+GGG | - | chr3.3:62190763-62190782 | MS.gene008016:intron | 25.0% |
| !!! | ATATTTTGTCATTTAGAACC+TGG | - | chr3.3:62191417-62191436 | MS.gene008016:CDS | 25.0% |
| !!! | CAACAAGTTTAATTTTCACA+GGG | + | chr3.3:62189967-62189986 | None:intergenic | 25.0% |
| !!! | TAACCAAAAACGGTTTTATT+CGG | + | chr3.3:62190299-62190318 | None:intergenic | 25.0% |
| !!! | TACCAAATCAGTTTTATGAA+CGG | + | chr3.3:62191299-62191318 | None:intergenic | 25.0% |
| !!! | TCCATTTTGAGGTTTAAATT+GGG | - | chr3.3:62191734-62191753 | MS.gene008016:intron | 25.0% |
| !!! | TTCCATTTTGAGGTTTAAAT+TGG | - | chr3.3:62191733-62191752 | MS.gene008016:intron | 25.0% |
| !!! | TTTAAAAGTTCGGTTTTGAA+AGG | - | chr3.3:62192007-62192026 | MS.gene008016:intron | 25.0% |
| AAATTTGAAAAGCTTAACCC+TGG | - | chr3.3:62191760-62191779 | MS.gene008016:intron | 30.0% | |
| AAGATTACAGGGGTAAAATT+GGG | - | chr3.3:62189215-62189234 | MS.gene008016:intron | 30.0% | |
| AAGCTGAAAACAGTTTATAC+CGG | - | chr3.3:62189495-62189514 | MS.gene008016:intron | 30.0% | |
| AATCATCTTCATTGTTTCCA+GGG | + | chr3.3:62191780-62191799 | None:intergenic | 30.0% | |
| ACAGGTATCATAAGATACAT+GGG | - | chr3.3:62190829-62190848 | MS.gene008016:intron | 30.0% | |
| ACCCACATAACAAAAAGAAA+AGG | + | chr3.3:62189870-62189889 | None:intergenic | 30.0% | |
| ACTTTGATGTTATTGGATTG+TGG | - | chr3.3:62190117-62190136 | MS.gene008016:intron | 30.0% | |
| AGAAGATAAAGGATATAGAG+AGG | + | chr3.3:62192477-62192496 | None:intergenic | 30.0% | |
| AGCATGAATTGAAGTATGAA+TGG | + | chr3.3:62192145-62192164 | None:intergenic | 30.0% | |
| ATTCAGAAAGAAAACTGAAC+CGG | - | chr3.3:62190250-62190269 | MS.gene008016:intron | 30.0% | |
| CAATACACGATTCAAAAAAG+TGG | + | chr3.3:62190398-62190417 | None:intergenic | 30.0% | |
| CACACGTAAATAGAAGATAA+AGG | + | chr3.3:62192488-62192507 | None:intergenic | 30.0% | |
| CCACATAACAAAAAGAAAAG+GGG | + | chr3.3:62189868-62189887 | None:intergenic | 30.0% | |
| CCCACATAACAAAAAGAAAA+GGG | + | chr3.3:62189869-62189888 | None:intergenic | 30.0% | |
| CGTTATTATCATTGGTAAGT+TGG | + | chr3.3:62191551-62191570 | None:intergenic | 30.0% | |
| CTCACTATCCATATAATCAA+CGG | + | chr3.3:62191846-62191865 | None:intergenic | 30.0% | |
| CTGATTGAATTTGTAGTGTT+TGG | - | chr3.3:62189110-62189129 | MS.gene008016:intron | 30.0% | |
| CTTTGATGTTATTGGATTGT+GGG | - | chr3.3:62190118-62190137 | MS.gene008016:intron | 30.0% | |
| GAAATTCTCTTAAGAAGACT+TGG | - | chr3.3:62191506-62191525 | MS.gene008016:CDS | 30.0% | |
| GAATACTACTTGTAGCAAAT+CGG | + | chr3.3:62191627-62191646 | None:intergenic | 30.0% | |
| GATAAAATAACTGTTATGCC+AGG | + | chr3.3:62191438-62191457 | None:intergenic | 30.0% | |
| GATAGAATATTGCAGTTTCT+AGG | - | chr3.3:62191262-62191281 | MS.gene008016:intron | 30.0% | |
| GGAAGTAGTTCCAATTTAAT+TGG | - | chr3.3:62190642-62190661 | MS.gene008016:intron | 30.0% | |
| GTAGTGTTTGGTAAAATTAG+TGG | - | chr3.3:62189122-62189141 | MS.gene008016:intron | 30.0% | |
| GTAGTTCCAATTTAATTGGA+AGG | - | chr3.3:62190646-62190665 | MS.gene008016:intron | 30.0% | |
| GTTGACTACCTTAAAAAACT+AGG | - | chr3.3:62190212-62190231 | MS.gene008016:intron | 30.0% | |
| TAAGATTACAGGGGTAAAAT+TGG | - | chr3.3:62189214-62189233 | MS.gene008016:intron | 30.0% | |
| TACCTTAAAAAACTAGGCAT+GGG | - | chr3.3:62190218-62190237 | MS.gene008016:intron | 30.0% | |
| TCATGAACTTTATTGTATGC+AGG | - | chr3.3:62189560-62189579 | MS.gene008016:intron | 30.0% | |
| TCCTCAACCAATGAAAATTA+GGG | - | chr3.3:62189743-62189762 | MS.gene008016:intron | 30.0% | |
| TGCTACTACTTTGATGTTAT+TGG | - | chr3.3:62190110-62190129 | MS.gene008016:intron | 30.0% | |
| TGGAAACAATGAAGATGATT+GGG | - | chr3.3:62191780-62191799 | MS.gene008016:intron | 30.0% | |
| TTGACAGTAAGTTATGATTC+AGG | - | chr3.3:62192576-62192595 | MS.gene008016:CDS | 30.0% | |
| TTTGATGTTATTGGATTGTG+GGG | - | chr3.3:62190119-62190138 | MS.gene008016:intron | 30.0% | |
| ! | AAACCGAATAAAACCGTTTT+TGG | - | chr3.3:62190293-62190312 | MS.gene008016:intron | 30.0% |
| ! | AATTGATTGTGGTTTTCTGT+AGG | - | chr3.3:62188888-62188907 | MS.gene008016:intron | 30.0% |
| ! | GTTCGATTGATGATATGATA+GGG | - | chr3.3:62191201-62191220 | MS.gene008016:CDS | 30.0% |
| ! | TGTTCGATTGATGATATGAT+AGG | - | chr3.3:62191200-62191219 | MS.gene008016:CDS | 30.0% |
| ! | TTTTAGACTAGACACTTTGA+TGG | - | chr3.3:62188980-62188999 | MS.gene008016:intron | 30.0% |
| !! | CACCCTATTTATTTAGGTTT+TGG | + | chr3.3:62191236-62191255 | None:intergenic | 30.0% |
| !! | CCCTTTTCTTTTTGTTATGT+GGG | - | chr3.3:62189866-62189885 | MS.gene008016:intron | 30.0% |
| !! | GCAACAAGTTTAATTTTCAC+AGG | + | chr3.3:62189968-62189987 | None:intergenic | 30.0% |
| !! | GGTATAAGCTATTTCTATAG+AGG | - | chr3.3:62189030-62189049 | MS.gene008016:intron | 30.0% |
| !!! | CCATTTTGAGGTTTAAATTG+GGG | - | chr3.3:62191735-62191754 | MS.gene008016:intron | 30.0% |
| !!! | CTATAATCATTTGGTTTTGC+AGG | - | chr3.3:62189901-62189920 | MS.gene008016:intron | 30.0% |
| !!! | TCCAATATTTTTTCATGGGT+CGG | + | chr3.3:62190752-62190771 | None:intergenic | 30.0% |
| AAAGTTTGGATGAAACTGGA+CGG | + | chr3.3:62190987-62191006 | None:intergenic | 35.0% | |
| AAGGAAAGTTTGGATGAAAC+TGG | + | chr3.3:62190991-62191010 | None:intergenic | 35.0% | |
| AAGTATGAATGGCTTAAAGC+AGG | + | chr3.3:62192134-62192153 | None:intergenic | 35.0% | |
| AATAGAAGAAGGTTGCCTAA+AGG | + | chr3.3:62192305-62192324 | None:intergenic | 35.0% | |
| ACCGACCCATGAAAAAATAT+TGG | - | chr3.3:62190748-62190767 | MS.gene008016:intron | 35.0% | |
| AGCTTATACCTAAGTGCTTA+TGG | + | chr3.3:62189020-62189039 | None:intergenic | 35.0% | |
| AGGATCTTTATGTGCACATT+GGG | - | chr3.3:62188908-62188927 | MS.gene008016:intron | 35.0% | |
| AGTGCTTATGGCAAAAATCA+AGG | + | chr3.3:62189008-62189027 | None:intergenic | 35.0% | |
| ATGATTTAGAGGGGTCTATT+TGG | + | chr3.3:62189544-62189563 | None:intergenic | 35.0% | |
| CAACAAATTATGCAGCATCA+AGG | - | chr3.3:62191457-62191476 | MS.gene008016:CDS | 35.0% | |
| CAATCATCTTCATTGTTTCC+AGG | + | chr3.3:62191781-62191800 | None:intergenic | 35.0% | |
| CAATTCATGCTGATGTCATA+TGG | - | chr3.3:62192154-62192173 | MS.gene008016:intron | 35.0% | |
| CACAGGTATCATAAGATACA+TGG | - | chr3.3:62190828-62190847 | MS.gene008016:intron | 35.0% | |
| CCCCAATTTAAACCTCAAAA+TGG | + | chr3.3:62191738-62191757 | None:intergenic | 35.0% | |
| CTACCTTAAAAAACTAGGCA+TGG | - | chr3.3:62190217-62190236 | MS.gene008016:intron | 35.0% | |
| CTCCTCAACCAATGAAAATT+AGG | - | chr3.3:62189742-62189761 | MS.gene008016:intron | 35.0% | |
| CTGGAAACAATGAAGATGAT+TGG | - | chr3.3:62191779-62191798 | MS.gene008016:intron | 35.0% | |
| GACCGTTCATAAAACTGATT+TGG | - | chr3.3:62191294-62191313 | MS.gene008016:intron | 35.0% | |
| GATAAAGGATATAGAGAGGA+TGG | + | chr3.3:62192473-62192492 | None:intergenic | 35.0% | |
| GCAAGCAAATAGATTGAGTT+TGG | - | chr3.3:62191901-62191920 | MS.gene008016:intron | 35.0% | |
| GTGAACCGCTTTGTATTATA+GGG | + | chr3.3:62190684-62190703 | None:intergenic | 35.0% | |
| GTTCAGCATAAAAAACAGCT+TGG | + | chr3.3:62191063-62191082 | None:intergenic | 35.0% | |
| TAAGGTAGTCAACAACAGAA+TGG | + | chr3.3:62190205-62190224 | None:intergenic | 35.0% | |
| TACATGCGACATTCCAAATT+CGG | + | chr3.3:62188447-62188466 | None:intergenic | 35.0% | |
| TAGGATCTTTATGTGCACAT+TGG | - | chr3.3:62188907-62188926 | MS.gene008016:intron | 35.0% | |
| TATAGAGGACAAGCTTATAG+AGG | - | chr3.3:62189045-62189064 | MS.gene008016:intron | 35.0% | |
| TCAACCAATGAAAATTAGGG+CGG | - | chr3.3:62189746-62189765 | MS.gene008016:intron | 35.0% | |
| TGATGGAGTTATCCACATTA+AGG | - | chr3.3:62189794-62189813 | MS.gene008016:intron | 35.0% | |
| TTCACCCTGTAATATCTGAT+GGG | - | chr3.3:62190699-62190718 | MS.gene008016:intron | 35.0% | |
| ! | ACTGAAGCAAATTGGTTCTT+TGG | - | chr3.3:62190325-62190344 | MS.gene008016:intron | 35.0% |
| ! | AGAACCAATTTGCTTCAGTT+CGG | + | chr3.3:62190324-62190343 | None:intergenic | 35.0% |
| ! | AGAGTGAACCGTTGATTATA+TGG | - | chr3.3:62191835-62191854 | MS.gene008016:intron | 35.0% |
| ! | AGCAAATTGGTTCTTTGGTT+CGG | - | chr3.3:62190330-62190349 | MS.gene008016:intron | 35.0% |
| ! | ATATCCGCCCTAATTTTCAT+TGG | + | chr3.3:62189753-62189772 | None:intergenic | 35.0% |
| ! | CAACAACAGAATGGCTTTTA+TGG | + | chr3.3:62190196-62190215 | None:intergenic | 35.0% |
| ! | CTTCGTGTTGATAAGGAAAA+GGG | - | chr3.3:62188660-62188679 | MS.gene008016:intron | 35.0% |
| ! | GATTTTTGCCATAAGCACTT+AGG | - | chr3.3:62189009-62189028 | MS.gene008016:intron | 35.0% |
| ! | TCTTCGTGTTGATAAGGAAA+AGG | - | chr3.3:62188659-62188678 | MS.gene008016:intron | 35.0% |
| ! | TTCTCTTAAGAAGACTTGGT+TGG | - | chr3.3:62191510-62191529 | MS.gene008016:CDS | 35.0% |
| !! | ATGGATAGTGAGTTGATTCT+TGG | - | chr3.3:62191854-62191873 | MS.gene008016:intron | 35.0% |
| !! | CAGTTTATTGACTTGTCTAG+AGG | + | chr3.3:62192190-62192209 | None:intergenic | 35.0% |
| !! | CCCCTTTTCTTTTTGTTATG+TGG | - | chr3.3:62189865-62189884 | MS.gene008016:intron | 35.0% |
| !!! | AAGTTCGGTTTTGAAAGGAT+AGG | - | chr3.3:62192012-62192031 | MS.gene008016:intron | 35.0% |
| !!! | TAATCATTTGGTTTTGCAGG+AGG | - | chr3.3:62189904-62189923 | MS.gene008016:intron | 35.0% |
| AAGTGAAACGTGAATGTCAC+AGG | - | chr3.3:62190811-62190830 | MS.gene008016:intron | 40.0% | |
| ACATTGATCTCAGTAAACGC+AGG | - | chr3.3:62188685-62188704 | MS.gene008016:intron | 40.0% | |
| ACTACTTGTAGCAAATCGGT+CGG | + | chr3.3:62191623-62191642 | None:intergenic | 40.0% | |
| AGAGGAAGAAGATACTGGAA+TGG | - | chr3.3:62192687-62192706 | MS.gene008016:CDS | 40.0% | |
| AGTGAAGAGGAAGAAGATAC+TGG | - | chr3.3:62192682-62192701 | MS.gene008016:CDS | 40.0% | |
| ATCTTTATGTGCACATTGGG+TGG | - | chr3.3:62188911-62188930 | MS.gene008016:intron | 40.0% | |
| CAGTTCGGGATAACCAAAAA+CGG | + | chr3.3:62190309-62190328 | None:intergenic | 40.0% | |
| CATTGATCTCAGTAAACGCA+GGG | - | chr3.3:62188686-62188705 | MS.gene008016:intron | 40.0% | |
| CCAATGGGAGATACATATCA+GGG | + | chr3.3:62190890-62190909 | None:intergenic | 40.0% | |
| CCGATACAAAAACAGCCAAT+GGG | + | chr3.3:62190905-62190924 | None:intergenic | 40.0% | |
| CTCGAATACAACAACATCGA+GGG | - | chr3.3:62188549-62188568 | MS.gene008016:CDS | 40.0% | |
| GAAGAGAATCCAAAAGCAGA+TGG | + | chr3.3:62192531-62192550 | None:intergenic | 40.0% | |
| GAGGAAGAAGATACTGGAAT+GGG | - | chr3.3:62192688-62192707 | MS.gene008016:CDS | 40.0% | |
| GATAAAGAGCAGAGAAACAG+AGG | - | chr3.3:62190559-62190578 | MS.gene008016:intron | 40.0% | |
| GCAGGCATTCAAAATTGTTG+TGG | - | chr3.3:62189578-62189597 | MS.gene008016:intron | 40.0% | |
| GGTGAACCGCTTTGTATTAT+AGG | + | chr3.3:62190685-62190704 | None:intergenic | 40.0% | |
| GTGACCCATCAGATATTACA+GGG | + | chr3.3:62190706-62190725 | None:intergenic | 40.0% | |
| GTTCACCCTGTAATATCTGA+TGG | - | chr3.3:62190698-62190717 | MS.gene008016:intron | 40.0% | |
| GTTGGATAGCGTGACATATA+TGG | - | chr3.3:62192230-62192249 | MS.gene008016:CDS | 40.0% | |
| TATCCCGAACTGAAGCAAAT+TGG | - | chr3.3:62190317-62190336 | MS.gene008016:intron | 40.0% | |
| TCTCGAATACAACAACATCG+AGG | - | chr3.3:62188548-62188567 | MS.gene008016:CDS | 40.0% | |
| TGATTCAGTGCAACTAGCAA+TGG | + | chr3.3:62192392-62192411 | None:intergenic | 40.0% | |
| TGCAGCATCAAGGAAAACTA+AGG | - | chr3.3:62191467-62191486 | MS.gene008016:CDS | 40.0% | |
| TGCTGTATCTGAAGAACTGA+AGG | - | chr3.3:62189686-62189705 | MS.gene008016:intron | 40.0% | |
| TGGCCATATTTGCGATACAA+AGG | + | chr3.3:62188937-62188956 | None:intergenic | 40.0% | |
| TGGCCTTTGTATCGCAAATA+TGG | - | chr3.3:62188931-62188950 | MS.gene008016:intron | 40.0% | |
| TGTATCGGGATACATATCGT+GGG | - | chr3.3:62190917-62190936 | MS.gene008016:intron | 40.0% | |
| TGTGACCCATCAGATATTAC+AGG | + | chr3.3:62190707-62190726 | None:intergenic | 40.0% | |
| TTACAATCTTGACAGGAGCA+AGG | - | chr3.3:62192346-62192365 | MS.gene008016:intron | 40.0% | |
| TTAGGGTTACCTCTAAATCG+AGG | + | chr3.3:62188803-62188822 | None:intergenic | 40.0% | |
| TTCAGTTCTTCAGATACAGC+AGG | + | chr3.3:62189687-62189706 | None:intergenic | 40.0% | |
| TTCTAGTCAGATGAGCTTGT+AGG | - | chr3.3:62189355-62189374 | MS.gene008016:intron | 40.0% | |
| TTGACAGGAGCAAGGAATAT+TGG | - | chr3.3:62192354-62192373 | MS.gene008016:intron | 40.0% | |
| TTGTATCGGGATACATATCG+TGG | - | chr3.3:62190916-62190935 | MS.gene008016:intron | 40.0% | |
| TTTCATCTTCTGGGTCTGTT+TGG | + | chr3.3:62189413-62189432 | None:intergenic | 40.0% | |
| ! | ACCTGAATTGATTTCGCATG+TGG | - | chr3.3:62190074-62190093 | MS.gene008016:intron | 40.0% |
| ! | AGAGTGCTCAAAACCTTATC+AGG | + | chr3.3:62189609-62189628 | None:intergenic | 40.0% |
| ! | CAAATATGGCCATGCTTTTG+AGG | - | chr3.3:62188945-62188964 | MS.gene008016:intron | 40.0% |
| ! | GAACCAATTTGCTTCAGTTC+GGG | + | chr3.3:62190323-62190342 | None:intergenic | 40.0% |
| ! | GATGGTTCTTCGTGTTGATA+AGG | - | chr3.3:62188653-62188672 | MS.gene008016:intron | 40.0% |
| ! | GCTGATAAGCTAGCTTATAG+TGG | - | chr3.3:62189071-62189090 | MS.gene008016:intron | 40.0% |
| ! | GGACAATGGTAATGCGATAA+CGG | - | chr3.3:62192723-62192742 | MS.gene008016:CDS | 40.0% |
| ! | GGATACTTACTAGACTGGTT+TGG | - | chr3.3:62190938-62190957 | MS.gene008016:intron | 40.0% |
| ! | GTTGATTCTTGGACTCAGTA+TGG | - | chr3.3:62191865-62191884 | MS.gene008016:intron | 40.0% |
| ! | TCATTGGTAAGTTGGCAACT+TGG | + | chr3.3:62191543-62191562 | None:intergenic | 40.0% |
| !! | AGCTAGCTTATAGTGGATAG+AGG | - | chr3.3:62189078-62189097 | MS.gene008016:intron | 40.0% |
| !! | GATTTCAGTTGGTTTGCACA+AGG | + | chr3.3:62191397-62191416 | None:intergenic | 40.0% |
| !! | GCCCTAATTTTCATTGGTTG+AGG | + | chr3.3:62189747-62189766 | None:intergenic | 40.0% |
| !! | TGCAGTTTCTAGGGTCATTT+GGG | - | chr3.3:62191272-62191291 | MS.gene008016:intron | 40.0% |
| !! | TTGCAGTTTCTAGGGTCATT+TGG | - | chr3.3:62191271-62191290 | MS.gene008016:intron | 40.0% |
| !!! | CACCCATGCCTAGTTTTTTA+AGG | + | chr3.3:62190223-62190242 | None:intergenic | 40.0% |
| !!! | CCATTGGCTGTTTTTGTATC+GGG | - | chr3.3:62190903-62190922 | MS.gene008016:intron | 40.0% |
| !!! | CCCATTGGCTGTTTTTGTAT+CGG | - | chr3.3:62190902-62190921 | MS.gene008016:intron | 40.0% |
| !!! | CGGTTTTGAAAGGATAGGTT+CGG | - | chr3.3:62192017-62192036 | MS.gene008016:intron | 40.0% |
| AACCTTGGACCTCGATTTAG+AGG | - | chr3.3:62188791-62188810 | MS.gene008016:CDS | 45.0% | |
| AAGAGCAGAGAAACAGAGGA+TGG | - | chr3.3:62190563-62190582 | MS.gene008016:intron | 45.0% | |
| AATCTACAACCGACCCTGTA+TGG | + | chr3.3:62192270-62192289 | None:intergenic | 45.0% | |
| ACGCGTGAAATCAAGGAAGT+TGG | - | chr3.3:62189630-62189649 | MS.gene008016:intron | 45.0% | |
| AGATGTTCAGTTCGCACACA+AGG | + | chr3.3:62191010-62191029 | None:intergenic | 45.0% | |
| AGTAGTAGCAAATTCACCCG+TGG | + | chr3.3:62190100-62190119 | None:intergenic | 45.0% | |
| AGTGGTAAGCACGTAAAGTG+GGG | + | chr3.3:62189993-62190012 | None:intergenic | 45.0% | |
| ATAGAAACAGAGCGTGGTGT+GGG | - | chr3.3:62190621-62190640 | MS.gene008016:intron | 45.0% | |
| ATCTACAACCGACCCTGTAT+GGG | + | chr3.3:62192269-62192288 | None:intergenic | 45.0% | |
| ATGGGTCACACAAACCTTAC+CGG | - | chr3.3:62190717-62190736 | MS.gene008016:intron | 45.0% | |
| ATTACAGCCATGTCCACTTC+TGG | + | chr3.3:62188483-62188502 | None:intergenic | 45.0% | |
| CCCGATACAAAAACAGCCAA+TGG | + | chr3.3:62190906-62190925 | None:intergenic | 45.0% | |
| CCCTGATATGTATCTCCCAT+TGG | - | chr3.3:62190887-62190906 | MS.gene008016:intron | 45.0% | |
| CCTGCGACACATAGTCATTT+GGG | - | chr3.3:62190857-62190876 | MS.gene008016:intron | 45.0% | |
| GAACAGAATGAAGAGGTCGA+AGG | - | chr3.3:62192649-62192668 | MS.gene008016:CDS | 45.0% | |
| GAGTGGTAAGCACGTAAAGT+GGG | + | chr3.3:62189994-62190013 | None:intergenic | 45.0% | |
| GCCAATGGGAGATACATATC+AGG | + | chr3.3:62190891-62190910 | None:intergenic | 45.0% | |
| GCCACATGCGAAATCAATTC+AGG | + | chr3.3:62190078-62190097 | None:intergenic | 45.0% | |
| GGACATGGCTGTAATGATTC+AGG | - | chr3.3:62188488-62188507 | MS.gene008016:CDS | 45.0% | |
| GTGAGCAGTCTCATCAAAGT+GGG | - | chr3.3:62188615-62188634 | MS.gene008016:intron | 45.0% | |
| GTGCAGTCACAATCAGTTTC+TGG | + | chr3.3:62191587-62191606 | None:intergenic | 45.0% | |
| GTTCAGACACTAGCTAGCTA+TGG | - | chr3.3:62191657-62191676 | MS.gene008016:intron | 45.0% | |
| GTTCGCACACAAGGAAAGTT+TGG | + | chr3.3:62191001-62191020 | None:intergenic | 45.0% | |
| TACCACTCAGACACTTGACA+AGG | - | chr3.3:62190006-62190025 | MS.gene008016:intron | 45.0% | |
| TACCTCTAAATCGAGGTCCA+AGG | + | chr3.3:62188796-62188815 | None:intergenic | 45.0% | |
| TACCTTGTCAAGTGTCTGAG+TGG | + | chr3.3:62190011-62190030 | None:intergenic | 45.0% | |
| TCAACACGAAGAACCATCAC+CGG | + | chr3.3:62188651-62188670 | None:intergenic | 45.0% | |
| TCACTTGCAGAAACCGCATT+GGG | + | chr3.3:62190797-62190816 | None:intergenic | 45.0% | |
| TCCAAAAGCAGATGGAGTGA+TGG | + | chr3.3:62192523-62192542 | None:intergenic | 45.0% | |
| TCGGTGCATGGTAGTCAAAT+TGG | - | chr3.3:62190349-62190368 | MS.gene008016:intron | 45.0% | |
| TCGTGGGATACTTACTAGAC+TGG | - | chr3.3:62190933-62190952 | MS.gene008016:intron | 45.0% | |
| TGAAGAACTGAAGGATGCTC+TGG | - | chr3.3:62189695-62189714 | MS.gene008016:intron | 45.0% | |
| TGAGTGGTAAGCACGTAAAG+TGG | + | chr3.3:62189995-62190014 | None:intergenic | 45.0% | |
| TGTGAAGGAGAAAGTCAGAG+TGG | - | chr3.3:62192438-62192457 | MS.gene008016:CDS | 45.0% | |
| TGTGAGCAGTCTCATCAAAG+TGG | - | chr3.3:62188614-62188633 | MS.gene008016:intron | 45.0% | |
| TGTTGTGGCTGATCCTGATA+AGG | - | chr3.3:62189593-62189612 | MS.gene008016:intron | 45.0% | |
| TTACAGCCATGTCCACTTCT+GGG | + | chr3.3:62188482-62188501 | None:intergenic | 45.0% | |
| TTCACTTGCAGAAACCGCAT+TGG | + | chr3.3:62190798-62190817 | None:intergenic | 45.0% | |
| TTCCAGTAGAACCCCATACA+GGG | - | chr3.3:62192254-62192273 | MS.gene008016:CDS | 45.0% | |
| TTTCCAGTAGAACCCCATAC+AGG | - | chr3.3:62192253-62192272 | MS.gene008016:CDS | 45.0% | |
| ! | AAACAGCTTGGTTCGTAGAG+TGG | + | chr3.3:62191051-62191070 | None:intergenic | 45.0% |
| ! | AAAGTACCCAGAAGTGGACA+TGG | - | chr3.3:62188473-62188492 | MS.gene008016:CDS | 45.0% |
| ! | ATCAAGGAAGTTGGTCCTGA+TGG | - | chr3.3:62189639-62189658 | MS.gene008016:intron | 45.0% |
| ! | ATTGATTTCGCATGTGGCCA+CGG | - | chr3.3:62190080-62190099 | MS.gene008016:intron | 45.0% |
| ! | CTTAAGAAGACTTGGTTGGC+AGG | - | chr3.3:62191514-62191533 | MS.gene008016:CDS | 45.0% |
| ! | GCATAACTTCAGCTTGCTTC+CGG | + | chr3.3:62190272-62190291 | None:intergenic | 45.0% |
| ! | TCAAGGAAGTTGGTCCTGAT+GGG | - | chr3.3:62189640-62189659 | MS.gene008016:intron | 45.0% |
| ! | TCCATCACTCCATCTGCTTT+TGG | - | chr3.3:62192519-62192538 | MS.gene008016:CDS | 45.0% |
| !! | CTAGACTGGTTTGGTTCAAC+TGG | - | chr3.3:62190947-62190966 | MS.gene008016:intron | 45.0% |
| !!! | TTTTTTTTTCTTATATATTT+TGG | - | chr3.3:62189830-62189849 | MS.gene008016:intron | 5.0% |
| AGAAGATACTGGAATGGGCG+AGG | - | chr3.3:62192693-62192712 | MS.gene008016:CDS | 50.0% | |
| AGATACAGCAGGTACCACCT+TGG | + | chr3.3:62189676-62189695 | None:intergenic | 50.0% | |
| AGTAGAACCCCATACAGGGT+CGG | - | chr3.3:62192258-62192277 | MS.gene008016:CDS | 50.0% | |
| CAAAGTGGGTCGAATCGAAC+CGG | - | chr3.3:62188629-62188648 | MS.gene008016:intron | 50.0% | |
| CACTCTCACGCGTGAAATCA+AGG | - | chr3.3:62189623-62189642 | MS.gene008016:intron | 50.0% | |
| CCCAAATGACTATGTGTCGC+AGG | + | chr3.3:62190860-62190879 | None:intergenic | 50.0% | |
| GACTCGATAGAAACAGAGCG+TGG | - | chr3.3:62190615-62190634 | MS.gene008016:intron | 50.0% | |
| GATAGAAACAGAGCGTGGTG+TGG | - | chr3.3:62190620-62190639 | MS.gene008016:intron | 50.0% | |
| GCCTGCGACACATAGTCATT+TGG | - | chr3.3:62190856-62190875 | MS.gene008016:intron | 50.0% | |
| GCTACGCGAACAGAATGAAG+AGG | - | chr3.3:62192642-62192661 | MS.gene008016:CDS | 50.0% | |
| GGTCCAAGGTTTCAGCAACA+TGG | + | chr3.3:62188782-62188801 | None:intergenic | 50.0% | |
| GTGAAGAACATCGCCGACAT+GGG | - | chr3.3:62188510-62188529 | MS.gene008016:CDS | 50.0% | |
| GTGGTAAGCACGTAAAGTGG+GGG | + | chr3.3:62189992-62190011 | None:intergenic | 50.0% | |
| TCTACAACCGACCCTGTATG+GGG | + | chr3.3:62192268-62192287 | None:intergenic | 50.0% | |
| TGAAACGTAAGCGCCCATGT+CGG | + | chr3.3:62188526-62188545 | None:intergenic | 50.0% | |
| TGGGTCACACAAACCTTACC+GGG | - | chr3.3:62190718-62190737 | MS.gene008016:intron | 50.0% | |
| TGGTTCGTAGAGTGGCAGTT+TGG | + | chr3.3:62191043-62191062 | None:intergenic | 50.0% | |
| TTGATTTCGCATGTGGCCAC+GGG | - | chr3.3:62190081-62190100 | MS.gene008016:intron | 50.0% | |
| TTGGTCACTTCTAGCCCATC+AGG | + | chr3.3:62189657-62189676 | None:intergenic | 50.0% | |
| ! | AGGTGATGACGACAGTGAAG+AGG | - | chr3.3:62192669-62192688 | MS.gene008016:CDS | 50.0% |
| ! | CGAAGCAAAGTACCCAGAAG+TGG | - | chr3.3:62188467-62188486 | MS.gene008016:CDS | 50.0% |
| !! | AGTTGGTTTGCACAAGGCGT+TGG | + | chr3.3:62191391-62191410 | None:intergenic | 50.0% |
| !! | TGATGGGCTAGAAGTGACCA+AGG | - | chr3.3:62189656-62189675 | MS.gene008016:intron | 50.0% |
| !! | TGGTTCTTTGGTTCGGTGCA+TGG | - | chr3.3:62190337-62190356 | MS.gene008016:intron | 50.0% |
| !! | TGGTTTTGCAGGAGGCAATG+CGG | - | chr3.3:62189912-62189931 | MS.gene008016:intron | 50.0% |
| AGAAACCGCATTGGGCTGCA+CGG | + | chr3.3:62190789-62190808 | None:intergenic | 55.0% | |
| CATGGGTCGGTACTAGAACC+CGG | + | chr3.3:62190739-62190758 | None:intergenic | 55.0% | |
| GACCCTGTATGGGGTTCTAC+TGG | + | chr3.3:62192259-62192278 | None:intergenic | 55.0% | |
| GCGCCATGTTGCTGAAACCT+TGG | - | chr3.3:62188776-62188795 | MS.gene008016:CDS | 55.0% | |
| GGTGAAGAACATCGCCGACA+TGG | - | chr3.3:62188509-62188528 | MS.gene008016:CDS | 55.0% | |
| GTCGGTACTAGAACCCGGTA+AGG | + | chr3.3:62190734-62190753 | None:intergenic | 55.0% | |
| TTTGCAGGAGGCAATGCGGA+AGG | - | chr3.3:62189916-62189935 | MS.gene008016:intron | 55.0% | |
| ! | GGCGAGGTTGATCTGGACAA+TGG | - | chr3.3:62192709-62192728 | MS.gene008016:CDS | 55.0% |
| ! | TGGAATGGGCGAGGTTGATC+TGG | - | chr3.3:62192702-62192721 | MS.gene008016:CDS | 55.0% |
| ! | TGGGCTAGAAGTGACCAAGG+TGG | - | chr3.3:62189659-62189678 | MS.gene008016:intron | 55.0% |
| ATGCGGAAGGCTGAAGCTGC+TGG | - | chr3.3:62189929-62189948 | MS.gene008016:intron | 60.0% | |
| GGGTCGAATCGAACCGGTGA+TGG | - | chr3.3:62188635-62188654 | MS.gene008016:intron | 60.0% | |
| CTGGGCCGTGCAGCCCAATG+CGG | - | chr3.3:62190781-62190800 | MS.gene008016:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 62188438 | 62192750 | 62188438 | ID=MS.gene008016 |
| chr3.3 | mRNA | 62188438 | 62192750 | 62188438 | ID=MS.gene008016.t1;Parent=MS.gene008016 |
| chr3.3 | exon | 62192376 | 62192750 | 62192376 | ID=MS.gene008016.t1.exon1;Parent=MS.gene008016.t1 |
| chr3.3 | CDS | 62192376 | 62192750 | 62192376 | ID=cds.MS.gene008016.t1;Parent=MS.gene008016.t1 |
| chr3.3 | exon | 62192222 | 62192278 | 62192222 | ID=MS.gene008016.t1.exon2;Parent=MS.gene008016.t1 |
| chr3.3 | CDS | 62192222 | 62192278 | 62192222 | ID=cds.MS.gene008016.t1;Parent=MS.gene008016.t1 |
| chr3.3 | exon | 62191373 | 62191606 | 62191373 | ID=MS.gene008016.t1.exon3;Parent=MS.gene008016.t1 |
| chr3.3 | CDS | 62191373 | 62191606 | 62191373 | ID=cds.MS.gene008016.t1;Parent=MS.gene008016.t1 |
| chr3.3 | exon | 62191161 | 62191265 | 62191161 | ID=MS.gene008016.t1.exon4;Parent=MS.gene008016.t1 |
| chr3.3 | CDS | 62191161 | 62191265 | 62191161 | ID=cds.MS.gene008016.t1;Parent=MS.gene008016.t1 |
| chr3.3 | exon | 62188729 | 62188827 | 62188729 | ID=MS.gene008016.t1.exon5;Parent=MS.gene008016.t1 |
| chr3.3 | CDS | 62188729 | 62188827 | 62188729 | ID=cds.MS.gene008016.t1;Parent=MS.gene008016.t1 |
| chr3.3 | exon | 62188438 | 62188590 | 62188438 | ID=MS.gene008016.t1.exon6;Parent=MS.gene008016.t1 |
| chr3.3 | CDS | 62188438 | 62188590 | 62188438 | ID=cds.MS.gene008016.t1;Parent=MS.gene008016.t1 |
| Gene Sequence |
| Protein sequence |
