Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05792.t1 | XP_003593833.1 | 91.6 | 226 | 18 | 1 | 1 | 226 | 1 | 225 | 5.50E-120 | 440.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05792.t1 | O23252 | 65.2 | 233 | 72 | 3 | 1 | 224 | 1 | 233 | 5.3e-87 | 322.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05792.t1 | G7ILV7 | 91.6 | 226 | 18 | 1 | 1 | 226 | 1 | 225 | 4.0e-120 | 440.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05792 | MS.gene73500 | PPI |
| MS.gene05792 | MS.gene31729 | PPI |
| MS.gene05792 | MS.gene008015 | PPI |
| MS.gene05792 | MS.gene35157 | PPI |
| MS.gene05792 | MS.gene63795 | PPI |
| MS.gene05792 | MS.gene36492 | PPI |
| MS.gene05792 | MS.gene031932 | PPI |
| MS.gene05792 | MS.gene67431 | PPI |
| MS.gene26468 | MS.gene05792 | PPI |
| MS.gene05792 | MS.gene040015 | PPI |
| MS.gene05792 | MS.gene023154 | PPI |
| MS.gene059369 | MS.gene05792 | PPI |
| MS.gene67432 | MS.gene05792 | PPI |
| MS.gene065547 | MS.gene05792 | PPI |
| MS.gene028300 | MS.gene05792 | PPI |
| MS.gene05792 | MS.gene059371 | PPI |
| MS.gene05792 | MS.gene040016 | PPI |
| MS.gene32419 | MS.gene05792 | PPI |
| MS.gene05792 | MS.gene33879 | PPI |
| MS.gene05792 | MS.gene047859 | PPI |
| MS.gene059370 | MS.gene05792 | PPI |
| MS.gene008016 | MS.gene05792 | PPI |
| MS.gene05792 | MS.gene031933 | PPI |
| MS.gene05792 | MS.gene066996 | PPI |
| MS.gene05792 | MS.gene26467 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05792.t1 | MTR_2g018260 | 91.593 | 226 | 18 | 1 | 1 | 226 | 1 | 225 | 4.63e-156 | 431 |
| MS.gene05792.t1 | MTR_1g045130 | 51.412 | 177 | 83 | 2 | 51 | 226 | 31 | 205 | 5.01e-62 | 192 |
| MS.gene05792.t1 | MTR_6g029230 | 37.107 | 159 | 98 | 1 | 41 | 199 | 40 | 196 | 4.91e-35 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05792.t1 | AT4G18040 | 61.157 | 242 | 71 | 2 | 1 | 226 | 1 | 235 | 3.47e-105 | 303 |
| MS.gene05792.t1 | AT1G29590 | 54.357 | 241 | 94 | 3 | 1 | 226 | 1 | 240 | 3.64e-90 | 265 |
| MS.gene05792.t1 | AT1G29550 | 53.942 | 241 | 95 | 3 | 1 | 226 | 1 | 240 | 1.05e-89 | 264 |
| MS.gene05792.t1 | AT5G35620 | 48.370 | 184 | 87 | 5 | 38 | 215 | 12 | 193 | 5.29e-55 | 174 |
| MS.gene05792.t1 | AT5G35620 | 48.370 | 184 | 87 | 5 | 38 | 215 | 12 | 193 | 5.29e-55 | 174 |
| MS.gene05792.t1 | AT5G35620 | 46.914 | 162 | 78 | 5 | 31 | 186 | 5 | 164 | 2.05e-45 | 149 |
| MS.gene05792.t1 | AT5G18110 | 36.913 | 149 | 94 | 0 | 51 | 199 | 43 | 191 | 4.18e-30 | 111 |
Find 57 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGAATTCTTGGACTTTC+TGG | 0.032991 | 2.3:+68062340 | MS.gene05792:CDS |
| TGATCGTCGTTGATGGATTT+TGG | 0.121670 | 2.3:-68062201 | None:intergenic |
| CAAATAGGGTCTTCCCATTT+TGG | 0.162249 | 2.3:-68063441 | None:intergenic |
| CTCACCCTCTTGAGAATTCT+TGG | 0.186379 | 2.3:+68062331 | MS.gene05792:CDS |
| AGCATAAGATTGAACCAAAA+TGG | 0.214116 | 2.3:+68063427 | MS.gene05792:CDS |
| AAGGGGTTTCTTGATTATAA+TGG | 0.289956 | 2.3:+68065747 | MS.gene05792:CDS |
| TTTCTACTGTTGAAGAGTTC+TGG | 0.298606 | 2.3:+68062430 | MS.gene05792:CDS |
| ACTACCCCACTCTTGACTTT+TGG | 0.310821 | 2.3:-68062385 | None:intergenic |
| TTTCCACCATTAGCACAAAT+AGG | 0.327320 | 2.3:-68063456 | None:intergenic |
| GTGACCGGCGGTGAGGGGTT+TGG | 0.329982 | 2.3:-68062304 | None:intergenic |
| CTTTAGTTGTTGGCAATGAT+TGG | 0.357757 | 2.3:+68063630 | MS.gene05792:intron |
| AGATTGGTGACCGGCGGTGA+GGG | 0.372856 | 2.3:-68062310 | None:intergenic |
| TGTGATTTGATCGTCGTTGA+TGG | 0.385098 | 2.3:-68062208 | None:intergenic |
| GGCGGTGAGGGGTTTGGAAA+TGG | 0.408337 | 2.3:-68062298 | None:intergenic |
| TTCCACCATTAGCACAAATA+GGG | 0.408644 | 2.3:-68063455 | None:intergenic |
| TGATACTAGCTGGTTGTATA+CGG | 0.414513 | 2.3:+68063509 | MS.gene05792:CDS |
| CTTGATTATAATGGAACCAT+TGG | 0.423062 | 2.3:+68065756 | MS.gene05792:CDS |
| TTTGTGCTAATGGTGGAAAC+TGG | 0.431316 | 2.3:+68063460 | MS.gene05792:CDS |
| CATCCTAGCAAGTTGGCTCT+TGG | 0.433951 | 2.3:+68063384 | MS.gene05792:CDS |
| AATTCTCAAGAGGGTGAGAT+TGG | 0.439429 | 2.3:-68062326 | None:intergenic |
| TGCTGCTAATGAAGCTGCTC+AGG | 0.454593 | 2.3:+68063740 | MS.gene05792:CDS |
| GCATAAGATTGAACCAAAAT+GGG | 0.459310 | 2.3:+68063428 | MS.gene05792:CDS |
| CAATCTTATGCTTGAAACAA+TGG | 0.479043 | 2.3:-68063416 | None:intergenic |
| GATCATGGAGATGAAATTTG+TGG | 0.479695 | 2.3:+68063663 | MS.gene05792:CDS |
| ATTGGAGAGCAATTTGATCA+TGG | 0.480040 | 2.3:+68063648 | MS.gene05792:CDS |
| GTGGAGCAGTTGTGAATGTC+AGG | 0.501928 | 2.3:+68063682 | MS.gene05792:CDS |
| GAAGACCCTATTTGTGCTAA+TGG | 0.505377 | 2.3:+68063450 | MS.gene05792:CDS |
| GGTGAGGGGTTTGGAAATGG+CGG | 0.516008 | 2.3:-68062295 | None:intergenic |
| CAGTTGTGAATGTCAGGAGT+AGG | 0.518752 | 2.3:+68063688 | MS.gene05792:CDS |
| AGTTGTGAATGTCAGGAGTA+GGG | 0.523775 | 2.3:+68063689 | MS.gene05792:CDS |
| GTTATATTTCAGATGAGCAT+CGG | 0.524149 | 2.3:+68065714 | MS.gene05792:intron |
| CAAGAGCCAACTTGCTAGGA+TGG | 0.531957 | 2.3:-68063383 | None:intergenic |
| ATCAACAACGATCTTGAAGA+AGG | 0.534065 | 2.3:+68062249 | MS.gene05792:CDS |
| ACTCCAAGAGCCAACTTGCT+AGG | 0.540401 | 2.3:-68063387 | None:intergenic |
| GGGGAAAATCTGATACTAGC+TGG | 0.548407 | 2.3:+68063499 | MS.gene05792:CDS |
| CTAAAGCCAAAAGTCAAGAG+TGG | 0.560725 | 2.3:+68062379 | MS.gene05792:CDS |
| TAAAGCCAAAAGTCAAGAGT+GGG | 0.560892 | 2.3:+68062380 | MS.gene05792:CDS |
| GATTGGTGACCGGCGGTGAG+GGG | 0.563209 | 2.3:-68062309 | None:intergenic |
| GAGATTGGTGACCGGCGGTG+AGG | 0.563789 | 2.3:-68062311 | None:intergenic |
| CATTCACCATCCTAGCAAGT+TGG | 0.564197 | 2.3:+68063377 | MS.gene05792:CDS |
| GTTGTGAATGTCAGGAGTAG+GGG | 0.573765 | 2.3:+68063690 | MS.gene05792:CDS |
| ATTTCCAAACCCCTCACCGC+CGG | 0.575370 | 2.3:+68062300 | MS.gene05792:CDS |
| GAGCATCGGAAAACAATGGA+AGG | 0.577156 | 2.3:+68065728 | MS.gene05792:CDS |
| TTGTGAATGTCAGGAGTAGG+GGG | 0.582965 | 2.3:+68063691 | MS.gene05792:CDS |
| GAGGGGTTTGGAAATGGCGG+AGG | 0.595654 | 2.3:-68062292 | None:intergenic |
| GCATCGGAAAACAATGGAAG+GGG | 0.598233 | 2.3:+68065730 | MS.gene05792:CDS |
| TACATGAAATATAAAGCCAA+TGG | 0.599495 | 2.3:-68065772 | None:intergenic |
| GACCCTATTTGTGCTAATGG+TGG | 0.605399 | 2.3:+68063453 | MS.gene05792:CDS |
| CTACTGTTGAAGAGTTCTGG+AGG | 0.611273 | 2.3:+68062433 | MS.gene05792:CDS |
| AAGAGGGTGAGATTGGTGAC+CGG | 0.612893 | 2.3:-68062319 | None:intergenic |
| AGATGAGCATCGGAAAACAA+TGG | 0.613189 | 2.3:+68065724 | MS.gene05792:intron |
| AGCATCGGAAAACAATGGAA+GGG | 0.625778 | 2.3:+68065729 | MS.gene05792:CDS |
| AAAGTCCAAGAATTCTCAAG+AGG | 0.638231 | 2.3:-68062336 | None:intergenic |
| AAGTCCAAGAATTCTCAAGA+GGG | 0.640086 | 2.3:-68062335 | None:intergenic |
| AGGGTGAGATTGGTGACCGG+CGG | 0.679762 | 2.3:-68062316 | None:intergenic |
| AAAGCCAAAAGTCAAGAGTG+GGG | 0.695736 | 2.3:+68062381 | MS.gene05792:CDS |
| TGTGAATGTCAGGAGTAGGG+GGG | 0.726035 | 2.3:+68063692 | MS.gene05792:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTATTTTATTAATAA+AGG | - | chr2.3:68064927-68064946 | None:intergenic | 0.0% |
| !!! | AAAATTATTTTATTAATAAA+GGG | - | chr2.3:68064926-68064945 | None:intergenic | 0.0% |
| !! | TTGTTTAAGTATATTATTTA+AGG | + | chr2.3:68064756-68064775 | MS.gene05792:intron | 10.0% |
| !!! | GATTCATTTTTATATTAATT+GGG | + | chr2.3:68062621-68062640 | MS.gene05792:intron | 10.0% |
| !!! | TGATTCATTTTTATATTAAT+TGG | + | chr2.3:68062620-68062639 | MS.gene05792:intron | 10.0% |
| !! | AATAAAATAAAGAATTGATG+AGG | - | chr2.3:68064507-68064526 | None:intergenic | 15.0% |
| !! | ATAAAATAAAGAATTGATGA+GGG | - | chr2.3:68064506-68064525 | None:intergenic | 15.0% |
| !!! | AATGTTGAAGAATTTTTTTA+AGG | + | chr2.3:68063042-68063061 | MS.gene05792:intron | 15.0% |
| !!! | AGTAATAATACATGTTTTAA+AGG | + | chr2.3:68064642-68064661 | MS.gene05792:intron | 15.0% |
| !!! | AGTATATTGGTTTTAAATTA+TGG | + | chr2.3:68064687-68064706 | MS.gene05792:intron | 15.0% |
| !!! | TATGATTCACTATTATTTTT+TGG | + | chr2.3:68065498-68065517 | MS.gene05792:intron | 15.0% |
| !!! | TGATTCATTTTTAGTTAATT+GGG | + | chr2.3:68063003-68063022 | MS.gene05792:intron | 15.0% |
| !! | AATTGTAAACAATAAGGTAT+TGG | - | chr2.3:68063994-68064013 | None:intergenic | 20.0% |
| !! | AGTTTGAATTGTAAACAATA+AGG | - | chr2.3:68064000-68064019 | None:intergenic | 20.0% |
| !! | ATTTCTATAAGCTATATTTG+AGG | + | chr2.3:68062856-68062875 | MS.gene05792:intron | 20.0% |
| !! | GAATTAGATGGTTATTATAA+TGG | + | chr2.3:68063882-68063901 | MS.gene05792:intron | 20.0% |
| !! | GATTGAGAATTTATATTTCA+GGG | + | chr2.3:68065407-68065426 | MS.gene05792:intron | 20.0% |
| !! | GCAAAATAACAAATAATAGT+AGG | - | chr2.3:68064475-68064494 | None:intergenic | 20.0% |
| !! | TAATACATAGTGTAGTATAT+TGG | + | chr2.3:68064674-68064693 | MS.gene05792:intron | 20.0% |
| !! | TGATTGAGAATTTATATTTC+AGG | + | chr2.3:68065406-68065425 | MS.gene05792:intron | 20.0% |
| !!! | AAGATTCAGTTTTTATGAAT+TGG | + | chr2.3:68062958-68062977 | MS.gene05792:intron | 20.0% |
| !!! | AATTCAATCTTTTCAACTTT+AGG | + | chr2.3:68063246-68063265 | MS.gene05792:intron | 20.0% |
| !!! | AATTCTATCTTTTTCACTTT+TGG | + | chr2.3:68062460-68062479 | MS.gene05792:intron | 20.0% |
| !!! | ACAATGTTGAAGAATTTTTT+AGG | + | chr2.3:68062658-68062677 | MS.gene05792:intron | 20.0% |
| !!! | ACTGATTATACTTTTGATAA+TGG | + | chr2.3:68065668-68065687 | MS.gene05792:intron | 20.0% |
| !!! | AGATTCAGTTTTTATGAATT+GGG | + | chr2.3:68062959-68062978 | MS.gene05792:intron | 20.0% |
| !!! | ATTGGGTATTTTTTTACATT+AGG | + | chr2.3:68062592-68062611 | MS.gene05792:intron | 20.0% |
| !!! | ATTGTAAACAATAAGGTATT+GGG | - | chr2.3:68063993-68064012 | None:intergenic | 20.0% |
| !!! | ATTGTTCATTTATTGATTCT+TGG | + | chr2.3:68063289-68063308 | MS.gene05792:intron | 20.0% |
| !!! | CTATTGAATTTGTTTTATGA+GGG | + | chr2.3:68063536-68063555 | MS.gene05792:intron | 20.0% |
| !!! | CTGATTATACTTTTGATAAT+GGG | + | chr2.3:68065669-68065688 | MS.gene05792:intron | 20.0% |
| !!! | GTGATTCATTTTTAGTTAAT+TGG | + | chr2.3:68063002-68063021 | MS.gene05792:intron | 20.0% |
| !!! | TGATGAATTAAAGTACTAAT+TGG | + | chr2.3:68063580-68063599 | MS.gene05792:intron | 20.0% |
| !!! | TGATTATACTTTTGATAATG+GGG | + | chr2.3:68065670-68065689 | MS.gene05792:intron | 20.0% |
| !!! | TTGGGTATTTTTTTACATTA+GGG | + | chr2.3:68062593-68062612 | MS.gene05792:intron | 20.0% |
| ! | AACCATCTAATTCTTTCTTT+GGG | - | chr2.3:68063875-68063894 | None:intergenic | 25.0% |
| ! | AATAAAGGGCTACTAAAATA+TGG | - | chr2.3:68064912-68064931 | None:intergenic | 25.0% |
| ! | ACAATTCAAAACAGAAGTTA+GGG | - | chr2.3:68065862-68065881 | None:intergenic | 25.0% |
| ! | ACTAAATTGATAGACCAAAA+AGG | - | chr2.3:68065369-68065388 | None:intergenic | 25.0% |
| ! | ATTCACAAAAACTGAATCTT+TGG | - | chr2.3:68062574-68062593 | None:intergenic | 25.0% |
| ! | CAGTTCATGAACAATTTAAA+TGG | + | chr2.3:68063919-68063938 | MS.gene05792:intron | 25.0% |
| ! | GAACACATAATTTACTCTTA+TGG | + | chr2.3:68065582-68065601 | MS.gene05792:intron | 25.0% |
| ! | TAACCATCTAATTCTTTCTT+TGG | - | chr2.3:68063876-68063895 | None:intergenic | 25.0% |
| ! | TACATGAAATATAAAGCCAA+TGG | - | chr2.3:68065775-68065794 | None:intergenic | 25.0% |
| ! | TATGCAATCTTATACAAAAG+CGG | - | chr2.3:68062778-68062797 | None:intergenic | 25.0% |
| ! | TGACAAATATAAAAACACAC+CGG | - | chr2.3:68065824-68065843 | None:intergenic | 25.0% |
| ! | TTGATTCAATAGAAACTAGA+TGG | + | chr2.3:68063782-68063801 | MS.gene05792:intron | 25.0% |
| ! | TTTATAGACTTTGGTCAATT+TGG | + | chr2.3:68065282-68065301 | MS.gene05792:intron | 25.0% |
| !! | AAAATGTTGCAGAAATTTTG+AGG | + | chr2.3:68063219-68063238 | MS.gene05792:intron | 25.0% |
| !! | AAGATTCAGTTTTTGTGAAT+TGG | + | chr2.3:68062574-68062593 | MS.gene05792:intron | 25.0% |
| !! | AATTGGGTATTTTTCACATT+AGG | + | chr2.3:68062975-68062994 | MS.gene05792:intron | 25.0% |
| !! | AGATTCAGTTTTTGTGAATT+GGG | + | chr2.3:68062575-68062594 | MS.gene05792:intron | 25.0% |
| !! | ATCGTTCATTTATTGTTTCT+TGG | + | chr2.3:68063164-68063183 | MS.gene05792:intron | 25.0% |
| !! | ATTGGGTATTTTTCACATTA+GGG | + | chr2.3:68062976-68062995 | MS.gene05792:intron | 25.0% |
| !! | GTTTTTCATCAATACCTTAT+TGG | + | chr2.3:68065228-68065247 | MS.gene05792:intron | 25.0% |
| !! | TTCTTTTAAATCAAACAGTG+TGG | - | chr2.3:68064394-68064413 | None:intergenic | 25.0% |
| !! | TTTTCAACTTTAGGTCTTTT+GGG | + | chr2.3:68063255-68063274 | MS.gene05792:intron | 25.0% |
| !!! | ATTGTTCATTTGTTGTTTCT+TGG | + | chr2.3:68062502-68062521 | MS.gene05792:intron | 25.0% |
| !!! | CTTGGTTATTTTTGTATCTT+GGG | + | chr2.3:68063182-68063201 | MS.gene05792:intron | 25.0% |
| !!! | GCTATTGAATTTGTTTTATG+AGG | + | chr2.3:68063535-68063554 | MS.gene05792:intron | 25.0% |
| !!! | TCTTGCGTGTTTTTAATTTT+GGG | + | chr2.3:68062547-68062566 | MS.gene05792:intron | 25.0% |
| !!! | TCTTGGTTATTTTTGTATCT+TGG | + | chr2.3:68063181-68063200 | MS.gene05792:intron | 25.0% |
| !!! | TTCTTGCGTGTTTTTAATTT+TGG | + | chr2.3:68062546-68062565 | MS.gene05792:intron | 25.0% |
| AACTTCAGAGACTATATTAG+TGG | - | chr2.3:68065264-68065283 | None:intergenic | 30.0% | |
| AAGGGGTTTCTTGATTATAA+TGG | + | chr2.3:68065747-68065766 | MS.gene05792:CDS | 30.0% | |
| AATAAGCTCTTTATCCAAAC+AGG | - | chr2.3:68062712-68062731 | None:intergenic | 30.0% | |
| ACCATCTAATTCTTTCTTTG+GGG | - | chr2.3:68063874-68063893 | None:intergenic | 30.0% | |
| AGCATAAGATTGAACCAAAA+TGG | + | chr2.3:68063427-68063446 | MS.gene05792:CDS | 30.0% | |
| CAAATAATAGTAGGTTGTAG+TGG | - | chr2.3:68064466-68064485 | None:intergenic | 30.0% | |
| CAAGCATAAACAGATACATA+TGG | - | chr2.3:68065627-68065646 | None:intergenic | 30.0% | |
| CAATCTTATGCTTGAAACAA+TGG | - | chr2.3:68063419-68063438 | None:intergenic | 30.0% | |
| CACAATTCAAAACAGAAGTT+AGG | - | chr2.3:68065863-68065882 | None:intergenic | 30.0% | |
| CAGATACATATGGTAATTTC+TGG | - | chr2.3:68065617-68065636 | None:intergenic | 30.0% | |
| CAGTTCATCAGCTATTTAAA+TGG | + | chr2.3:68065163-68065182 | MS.gene05792:intron | 30.0% | |
| CATTATCATAGTTGTCAAAG+CGG | - | chr2.3:68065042-68065061 | None:intergenic | 30.0% | |
| GAGGACTTATGAAAATAAGT+TGG | + | chr2.3:68062875-68062894 | MS.gene05792:intron | 30.0% | |
| GCATAAGATTGAACCAAAAT+GGG | + | chr2.3:68063428-68063447 | MS.gene05792:CDS | 30.0% | |
| GTTATATTTCAGATGAGCAT+CGG | + | chr2.3:68065714-68065733 | MS.gene05792:intron | 30.0% | |
| TGATGAAAAACAAGAAACAC+AGG | - | chr2.3:68065219-68065238 | None:intergenic | 30.0% | |
| ! | AACAGTAGAAAAAGTGTAGA+CGG | - | chr2.3:68062421-68062440 | None:intergenic | 30.0% |
| ! | AACTCTTGTAATTTGTCAGA+TGG | + | chr2.3:68065535-68065554 | MS.gene05792:intron | 30.0% |
| ! | CTTGATTATAATGGAACCAT+TGG | + | chr2.3:68065756-68065775 | MS.gene05792:CDS | 30.0% |
| ! | CTTTTCAACTTTAGGTCTTT+TGG | + | chr2.3:68063254-68063273 | MS.gene05792:intron | 30.0% |
| ! | GGCTTTATATTTCATGTAAG+TGG | + | chr2.3:68065777-68065796 | MS.gene05792:intron | 30.0% |
| ! | TGGAAAGTTTTCACGTTTTT+TGG | + | chr2.3:68065183-68065202 | MS.gene05792:intron | 30.0% |
| ! | TGTTGATGTCTTCGATTTTA+GGG | - | chr2.3:68062236-68062255 | None:intergenic | 30.0% |
| ! | TTCTTGGTAACTTTAGTTGT+TGG | + | chr2.3:68063620-68063639 | MS.gene05792:intron | 30.0% |
| ! | TTGAGGATTTTCAATATCAG+AGG | - | chr2.3:68065337-68065356 | None:intergenic | 30.0% |
| ! | TTGTTGATGTCTTCGATTTT+AGG | - | chr2.3:68062237-68062256 | None:intergenic | 30.0% |
| !! | AATCTTTTGAGAGACTGTTT+AGG | - | chr2.3:68062944-68062963 | None:intergenic | 30.0% |
| !! | TCGTGTTACTGAAATTTTCA+TGG | + | chr2.3:68063333-68063352 | MS.gene05792:intron | 30.0% |
| !! | TCTCTGAAGTTTATAGACTT+TGG | + | chr2.3:68065273-68065292 | MS.gene05792:intron | 30.0% |
| !! | TTGAATTGTGCTATTTCTGT+AGG | + | chr2.3:68065873-68065892 | MS.gene05792:intron | 30.0% |
| !! | TTTTTCACTTTTGGTCTTCT+GGG | + | chr2.3:68062469-68062488 | MS.gene05792:intron | 30.0% |
| !!! | TTTTAGAATTGCTGAGAGTT+AGG | - | chr2.3:68065471-68065490 | None:intergenic | 30.0% |
| AAAGTCCAAGAATTCTCAAG+AGG | - | chr2.3:68062339-68062358 | None:intergenic | 35.0% | |
| AAGTCCAAGAATTCTCAAGA+GGG | - | chr2.3:68062338-68062357 | None:intergenic | 35.0% | |
| ACCCCAAAGAAAGAATTAGA+TGG | + | chr2.3:68063870-68063889 | MS.gene05792:intron | 35.0% | |
| ATCAACAACGATCTTGAAGA+AGG | + | chr2.3:68062249-68062268 | MS.gene05792:CDS | 35.0% | |
| ATGAAAGTAATAGTCACGTG+AGG | + | chr2.3:68064357-68064376 | MS.gene05792:intron | 35.0% | |
| ATGAGCAGTTGTTATGTGAA+TGG | + | chr2.3:68065091-68065110 | MS.gene05792:intron | 35.0% | |
| ATGTTCTCTGTTGTCAATTG+CGG | + | chr2.3:68064034-68064053 | MS.gene05792:intron | 35.0% | |
| ATTGGAGAGCAATTTGATCA+TGG | + | chr2.3:68063648-68063667 | MS.gene05792:CDS | 35.0% | |
| CAAAAAGGTCTAACTGATTG+AGG | - | chr2.3:68065354-68065373 | None:intergenic | 35.0% | |
| CTTTAGTTGTTGGCAATGAT+TGG | + | chr2.3:68063630-68063649 | MS.gene05792:intron | 35.0% | |
| GATCATGGAGATGAAATTTG+TGG | + | chr2.3:68063663-68063682 | MS.gene05792:CDS | 35.0% | |
| TAAAGCCAAAAGTCAAGAGT+GGG | + | chr2.3:68062380-68062399 | MS.gene05792:CDS | 35.0% | |
| TGATACTAGCTGGTTGTATA+CGG | + | chr2.3:68063509-68063528 | MS.gene05792:CDS | 35.0% | |
| TTCCACCATTAGCACAAATA+GGG | - | chr2.3:68063458-68063477 | None:intergenic | 35.0% | |
| TTGAGAATTCTTGGACTTTC+TGG | + | chr2.3:68062340-68062359 | MS.gene05792:CDS | 35.0% | |
| TTTCCACCATTAGCACAAAT+AGG | - | chr2.3:68063459-68063478 | None:intergenic | 35.0% | |
| TTTCTACTGTTGAAGAGTTC+TGG | + | chr2.3:68062430-68062449 | MS.gene05792:CDS | 35.0% | |
| ! | ACAGTAGAAAAAGTGTAGAC+GGG | - | chr2.3:68062420-68062439 | None:intergenic | 35.0% |
| ! | AGCTTCGATCTTTTCACTTT+AGG | + | chr2.3:68062684-68062703 | MS.gene05792:intron | 35.0% |
| ! | CTCAATCAGTTAGACCTTTT+TGG | + | chr2.3:68065352-68065371 | MS.gene05792:intron | 35.0% |
| ! | GCTTCGATCTTTTCACTTTA+GGG | + | chr2.3:68062685-68062704 | MS.gene05792:intron | 35.0% |
| ! | TTTCACTTTAGGGACTTGTT+TGG | + | chr2.3:68062695-68062714 | MS.gene05792:intron | 35.0% |
| !! | CATGTGTGTGTTTTTGTTCT+TGG | + | chr2.3:68063604-68063623 | MS.gene05792:intron | 35.0% |
| !! | CTTTTTCACTTTTGGTCTTC+TGG | + | chr2.3:68062468-68062487 | MS.gene05792:intron | 35.0% |
| !!! | ACTGGACTGTGAATTTTTTG+AGG | + | chr2.3:68063478-68063497 | MS.gene05792:CDS | 35.0% |
| !!! | CTGGACTGTGAATTTTTTGA+GGG | + | chr2.3:68063479-68063498 | MS.gene05792:CDS | 35.0% |
| !!! | TGGACTGTGAATTTTTTGAG+GGG | + | chr2.3:68063480-68063499 | MS.gene05792:CDS | 35.0% |
| AAAGCCAAAAGTCAAGAGTG+GGG | + | chr2.3:68062381-68062400 | MS.gene05792:CDS | 40.0% | |
| AATTCTCAAGAGGGTGAGAT+TGG | - | chr2.3:68062329-68062348 | None:intergenic | 40.0% | |
| ACATAACAACTGCTCATCGT+TGG | - | chr2.3:68065088-68065107 | None:intergenic | 40.0% | |
| AGTTGTGAATGTCAGGAGTA+GGG | + | chr2.3:68063689-68063708 | MS.gene05792:CDS | 40.0% | |
| CTAAAGCCAAAAGTCAAGAG+TGG | + | chr2.3:68062379-68062398 | MS.gene05792:CDS | 40.0% | |
| GAAGACCCTATTTGTGCTAA+TGG | + | chr2.3:68063450-68063469 | MS.gene05792:CDS | 40.0% | |
| GGGGGGAAAGAATTTCTATT+TGG | + | chr2.3:68063709-68063728 | MS.gene05792:CDS | 40.0% | |
| GTATCTGTTTATGCTTGTGC+TGG | + | chr2.3:68065630-68065649 | MS.gene05792:intron | 40.0% | |
| GTGGTTCACTCTAACCAATA+AGG | - | chr2.3:68065245-68065264 | None:intergenic | 40.0% | |
| TGGGAGAAAACAAGAAACAC+AGG | - | chr2.3:68063974-68063993 | None:intergenic | 40.0% | |
| TGTGATTTGATCGTCGTTGA+TGG | - | chr2.3:68062211-68062230 | None:intergenic | 40.0% | |
| ! | AATAGTAGGTTGTAGTGGAG+TGG | - | chr2.3:68064461-68064480 | None:intergenic | 40.0% |
| ! | AGCATCGGAAAACAATGGAA+GGG | + | chr2.3:68065729-68065748 | MS.gene05792:CDS | 40.0% |
| ! | ATAGTAGGTTGTAGTGGAGT+GGG | - | chr2.3:68064460-68064479 | None:intergenic | 40.0% |
| ! | CAAATAGGGTCTTCCCATTT+TGG | - | chr2.3:68063444-68063463 | None:intergenic | 40.0% |
| ! | GAACCAAAACACAGTCGTTT+TGG | - | chr2.3:68064241-68064260 | None:intergenic | 40.0% |
| ! | TTTCACTTTAGGGACCTGTT+TGG | + | chr2.3:68063079-68063098 | MS.gene05792:intron | 40.0% |
| ! | TTTGTGCTAATGGTGGAAAC+TGG | + | chr2.3:68063460-68063479 | MS.gene05792:CDS | 40.0% |
| !! | AGATGAGCATCGGAAAACAA+TGG | + | chr2.3:68065724-68065743 | MS.gene05792:intron | 40.0% |
| !! | CTTGCTGTGTGTTTTTATGC+CGG | + | chr2.3:68065802-68065821 | MS.gene05792:intron | 40.0% |
| !! | TGGTTCTTGGATGTTGTTTC+CGG | + | chr2.3:68064255-68064274 | MS.gene05792:intron | 40.0% |
| !!! | AACGACTGTGTTTTGGTTCT+TGG | + | chr2.3:68064242-68064261 | MS.gene05792:intron | 40.0% |
| !!! | ACTTTTGGCTTTAGCTTGAG+GGG | - | chr2.3:68062373-68062392 | None:intergenic | 40.0% |
| !!! | ATCGTCGTTGATGGATTTTG+GGG | - | chr2.3:68062202-68062221 | None:intergenic | 40.0% |
| !!! | GACTTTTGGCTTTAGCTTGA+GGG | - | chr2.3:68062374-68062393 | None:intergenic | 40.0% |
| !!! | GATCGTCGTTGATGGATTTT+GGG | - | chr2.3:68062203-68062222 | None:intergenic | 40.0% |
| !!! | TGACTTTTGGCTTTAGCTTG+AGG | - | chr2.3:68062375-68062394 | None:intergenic | 40.0% |
| !!! | TGATCGTCGTTGATGGATTT+TGG | - | chr2.3:68062204-68062223 | None:intergenic | 40.0% |
| ACTAGCTGGTTGTATACGGT+AGG | + | chr2.3:68063513-68063532 | MS.gene05792:intron | 45.0% | |
| CACGTACTATTAGTCACGTG+AGG | + | chr2.3:68064415-68064434 | MS.gene05792:intron | 45.0% | |
| CAGTTGTGAATGTCAGGAGT+AGG | + | chr2.3:68063688-68063707 | MS.gene05792:CDS | 45.0% | |
| CATTCACCATCCTAGCAAGT+TGG | + | chr2.3:68063377-68063396 | MS.gene05792:CDS | 45.0% | |
| CTCACCCTCTTGAGAATTCT+TGG | + | chr2.3:68062331-68062350 | MS.gene05792:CDS | 45.0% | |
| GACCCTATTTGTGCTAATGG+TGG | + | chr2.3:68063453-68063472 | MS.gene05792:CDS | 45.0% | |
| GCATCGGAAAACAATGGAAG+GGG | + | chr2.3:68065730-68065749 | MS.gene05792:CDS | 45.0% | |
| GGGGAAAATCTGATACTAGC+TGG | + | chr2.3:68063499-68063518 | MS.gene05792:CDS | 45.0% | |
| GTTGTGAATGTCAGGAGTAG+GGG | + | chr2.3:68063690-68063709 | MS.gene05792:CDS | 45.0% | |
| TAGTTGTCAAAGCGGAAACG+CGG | - | chr2.3:68065034-68065053 | None:intergenic | 45.0% | |
| TATGCTCCGATCCGAAATAG+CGG | - | chr2.3:68064201-68064220 | None:intergenic | 45.0% | |
| TCTCTCTCCTTCAGATCTAC+CGG | - | chr2.3:68064277-68064296 | None:intergenic | 45.0% | |
| TTGTGAATGTCAGGAGTAGG+GGG | + | chr2.3:68063691-68063710 | MS.gene05792:CDS | 45.0% | |
| ! | ACTACCCCACTCTTGACTTT+TGG | - | chr2.3:68062388-68062407 | None:intergenic | 45.0% |
| ! | CTACTGTTGAAGAGTTCTGG+AGG | + | chr2.3:68062433-68062452 | MS.gene05792:CDS | 45.0% |
| ! | GAGCCAAAACGACTGTGTTT+TGG | + | chr2.3:68064235-68064254 | MS.gene05792:intron | 45.0% |
| ! | GTTGTTTCCGGTAGATCTGA+AGG | + | chr2.3:68064267-68064286 | MS.gene05792:intron | 45.0% |
| !! | GAGCATCGGAAAACAATGGA+AGG | + | chr2.3:68065728-68065747 | MS.gene05792:CDS | 45.0% |
| !!! | ATAAAATAATTTTTAGTTTT+AGG | + | chr2.3:68064933-68064952 | MS.gene05792:intron | 5.0% |
| ATCGGAGAACTAGGGTTTCG+AGG | + | chr2.3:68064130-68064149 | MS.gene05792:intron | 50.0% | |
| ATCTGAAGGAGAGAGAGACG+AGG | + | chr2.3:68064281-68064300 | MS.gene05792:intron | 50.0% | |
| GGCCACCCTAAAAATTGACG+CGG | - | chr2.3:68065003-68065022 | None:intergenic | 50.0% | |
| GTGGAGCAGTTGTGAATGTC+AGG | + | chr2.3:68063682-68063701 | MS.gene05792:CDS | 50.0% | |
| TCTGAAGGAGAGAGAGACGA+GGG | + | chr2.3:68064282-68064301 | MS.gene05792:intron | 50.0% | |
| TGCTGCTAATGAAGCTGCTC+AGG | + | chr2.3:68063740-68063759 | MS.gene05792:CDS | 50.0% | |
| TGTGAATGTCAGGAGTAGGG+GGG | + | chr2.3:68063692-68063711 | MS.gene05792:CDS | 50.0% | |
| ! | AAGAGGGTGAGATTGGTGAC+CGG | - | chr2.3:68062322-68062341 | None:intergenic | 50.0% |
| ! | ACTCCAAGAGCCAACTTGCT+AGG | - | chr2.3:68063390-68063409 | None:intergenic | 50.0% |
| ! | CATCCTAGCAAGTTGGCTCT+TGG | + | chr2.3:68063384-68063403 | MS.gene05792:CDS | 50.0% |
| ! | CTGACGCGGCTGTTCATTTT+TGG | - | chr2.3:68064091-68064110 | None:intergenic | 50.0% |
| ! | TAGGTTGTAGTGGAGTGGGT+GGG | - | chr2.3:68064456-68064475 | None:intergenic | 50.0% |
| ! | TCACGTGAGGCACTTTATGC+TGG | + | chr2.3:68064370-68064389 | MS.gene05792:intron | 50.0% |
| !! | CAAGAGCCAACTTGCTAGGA+TGG | - | chr2.3:68063386-68063405 | None:intergenic | 50.0% |
| AGTTCTCCGATAGCGCTGCA+CGG | - | chr2.3:68064121-68064140 | None:intergenic | 55.0% | |
| ATTTCCAAACCCCTCACCGC+CGG | + | chr2.3:68062300-68062319 | MS.gene05792:CDS | 55.0% | |
| CCCTAAAAATTGACGCGGCG+CGG | - | chr2.3:68064998-68065017 | None:intergenic | 55.0% | |
| CTGAAGGAGAGAGAGACGAG+GGG | + | chr2.3:68064283-68064302 | MS.gene05792:intron | 55.0% | |
| GCAGCGCTATCGGAGAACTA+GGG | + | chr2.3:68064122-68064141 | MS.gene05792:intron | 55.0% | |
| GGTCAAAGCGGCCGCTATTT+CGG | + | chr2.3:68064187-68064206 | MS.gene05792:intron | 55.0% | |
| GGTGAGGGGTTTGGAAATGG+CGG | - | chr2.3:68062298-68062317 | None:intergenic | 55.0% | |
| TATCAGCCCGCTACGCTACA+CGG | - | chr2.3:68064164-68064183 | None:intergenic | 55.0% | |
| TGCAGCGCTATCGGAGAACT+AGG | + | chr2.3:68064121-68064140 | MS.gene05792:intron | 55.0% | |
| ! | AAGCGGCCGCTATTTCGGAT+CGG | + | chr2.3:68064192-68064211 | MS.gene05792:intron | 55.0% |
| ! | ACCGCGCCGCGTCAATTTTT+AGG | + | chr2.3:68064994-68065013 | MS.gene05792:intron | 55.0% |
| ! | CCGCGCCGCGTCAATTTTTA+GGG | + | chr2.3:68064995-68065014 | MS.gene05792:intron | 55.0% |
| ! | GTAGGTTGTAGTGGAGTGGG+TGG | - | chr2.3:68064457-68064476 | None:intergenic | 55.0% |
| !! | CGCCGCGTCAATTTTTAGGG+TGG | + | chr2.3:68064998-68065017 | MS.gene05792:intron | 55.0% |
| AAGGAGAGAGAGACGAGGGG+AGG | + | chr2.3:68064286-68064305 | MS.gene05792:intron | 60.0% | |
| AATTGACGCGGCGCGGTATG+CGG | - | chr2.3:68064991-68065010 | None:intergenic | 60.0% | |
| AGAGAGACGAGGGGAGGAAG+AGG | + | chr2.3:68064292-68064311 | MS.gene05792:intron | 60.0% | |
| CGCGAAACCGTGTAGCGTAG+CGG | + | chr2.3:68064154-68064173 | MS.gene05792:intron | 60.0% | |
| CGCTACGCTACACGGTTTCG+CGG | - | chr2.3:68064156-68064175 | None:intergenic | 60.0% | |
| GAGGGGTTTGGAAATGGCGG+AGG | - | chr2.3:68062295-68062314 | None:intergenic | 60.0% | |
| GCGAAACCGTGTAGCGTAGC+GGG | + | chr2.3:68064155-68064174 | MS.gene05792:intron | 60.0% | |
| GCGGGGGCTATTACATGACG+CGG | - | chr2.3:68064961-68064980 | None:intergenic | 60.0% | |
| GGCGGTGAGGGGTTTGGAAA+TGG | - | chr2.3:68062301-68062320 | None:intergenic | 60.0% | |
| TTGTCAATTGCGGCCGCTCC+CGG | + | chr2.3:68064044-68064063 | MS.gene05792:intron | 60.0% | |
| ! | AGATTGGTGACCGGCGGTGA+GGG | - | chr2.3:68062313-68062332 | None:intergenic | 60.0% |
| ! | AGGGTGAGATTGGTGACCGG+CGG | - | chr2.3:68062319-68062338 | None:intergenic | 60.0% |
| !! | GGGCTGATAGCGGGTCAAAG+CGG | + | chr2.3:68064175-68064194 | MS.gene05792:intron | 60.0% |
| !! | GTAGCGTAGCGGGCTGATAG+CGG | + | chr2.3:68064165-68064184 | MS.gene05792:intron | 60.0% |
| !! | TAGCGTAGCGGGCTGATAGC+GGG | + | chr2.3:68064166-68064185 | MS.gene05792:intron | 60.0% |
| ACGCCACCGTGCAGCGCTAT+CGG | + | chr2.3:68064112-68064131 | MS.gene05792:intron | 65.0% | |
| ATTGACGCGGCGCGGTATGC+GGG | - | chr2.3:68064990-68065009 | None:intergenic | 65.0% | |
| TCTCCGATAGCGCTGCACGG+TGG | - | chr2.3:68064118-68064137 | None:intergenic | 65.0% | |
| TGCACGGTGGCGTTCTGACG+CGG | - | chr2.3:68064105-68064124 | None:intergenic | 65.0% | |
| ! | GAGATTGGTGACCGGCGGTG+AGG | - | chr2.3:68062314-68062333 | None:intergenic | 65.0% |
| ! | GATTGGTGACCGGCGGTGAG+GGG | - | chr2.3:68062312-68062331 | None:intergenic | 65.0% |
| GTGACCGGCGGTGAGGGGTT+TGG | - | chr2.3:68062307-68062326 | None:intergenic | 70.0% | |
| AGCGGAAACGCGGCGCGACG+CGG | - | chr2.3:68065024-68065043 | None:intergenic | 75.0% | |
| ! | CGCGGTATGCGGGCGCGACG+CGG | - | chr2.3:68064980-68064999 | None:intergenic | 80.0% |
| ! | CGGTATGCGGGCGCGACGCG+GGG | - | chr2.3:68064978-68064997 | None:intergenic | 80.0% |
| ! | CTCCCGGCGCTATCGCGGCG+CGG | + | chr2.3:68064060-68064079 | MS.gene05792:intron | 80.0% |
| ! | CTCCGCGCCGCGATAGCGCC+GGG | - | chr2.3:68064065-68064084 | None:intergenic | 80.0% |
| ! | GCGGTATGCGGGCGCGACGC+GGG | - | chr2.3:68064979-68064998 | None:intergenic | 80.0% |
| ! | GCTCCGCGCCGCGATAGCGC+CGG | - | chr2.3:68064066-68064085 | None:intergenic | 80.0% |
| ! | GGCCGCTCCCGGCGCTATCG+CGG | + | chr2.3:68064055-68064074 | MS.gene05792:intron | 80.0% |
| ! | GGCGCTATCGCGGCGCGGAG+CGG | + | chr2.3:68064065-68064084 | MS.gene05792:intron | 80.0% |
| ! | GGTATGCGGGCGCGACGCGG+GGG | - | chr2.3:68064977-68064996 | None:intergenic | 80.0% |
| !! | CGCCGCGATAGCGCCGGGAG+CGG | - | chr2.3:68064060-68064079 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 68062183 | 68065945 | 68062183 | ID=MS.gene05792 |
| chr2.3 | mRNA | 68062183 | 68065945 | 68062183 | ID=MS.gene05792.t1;Parent=MS.gene05792 |
| chr2.3 | exon | 68062183 | 68062454 | 68062183 | ID=MS.gene05792.t1.exon1;Parent=MS.gene05792.t1 |
| chr2.3 | CDS | 68062183 | 68062454 | 68062183 | ID=cds.MS.gene05792.t1;Parent=MS.gene05792.t1 |
| chr2.3 | exon | 68063365 | 68063530 | 68063365 | ID=MS.gene05792.t1.exon2;Parent=MS.gene05792.t1 |
| chr2.3 | CDS | 68063365 | 68063530 | 68063365 | ID=cds.MS.gene05792.t1;Parent=MS.gene05792.t1 |
| chr2.3 | exon | 68063636 | 68063761 | 68063636 | ID=MS.gene05792.t1.exon3;Parent=MS.gene05792.t1 |
| chr2.3 | CDS | 68063636 | 68063761 | 68063636 | ID=cds.MS.gene05792.t1;Parent=MS.gene05792.t1 |
| chr2.3 | exon | 68065726 | 68065791 | 68065726 | ID=MS.gene05792.t1.exon4;Parent=MS.gene05792.t1 |
| chr2.3 | CDS | 68065726 | 68065791 | 68065726 | ID=cds.MS.gene05792.t1;Parent=MS.gene05792.t1 |
| chr2.3 | exon | 68065895 | 68065945 | 68065895 | ID=MS.gene05792.t1.exon5;Parent=MS.gene05792.t1 |
| chr2.3 | CDS | 68065895 | 68065945 | 68065895 | ID=cds.MS.gene05792.t1;Parent=MS.gene05792.t1 |
| Gene Sequence |
| Protein sequence |
