Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012447.t1 | XP_003610217.1 | 96.9 | 814 | 21 | 1 | 1 | 810 | 32 | 845 | 0.00E+00 | 1609.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012447.t1 | Q9ZV48 | 66.5 | 790 | 252 | 6 | 24 | 803 | 49 | 835 | 0.0e+00 | 1094.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012447.t1 | G7JEA0 | 96.9 | 814 | 21 | 1 | 1 | 810 | 32 | 845 | 0.0e+00 | 1609.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012447 | MS.gene73417 | PPI |
| MS.gene012447 | MS.gene029463 | PPI |
| MS.gene012447 | MS.gene75183 | PPI |
| MS.gene012447 | MS.gene040931 | PPI |
| MS.gene012447 | MS.gene71778 | PPI |
| MS.gene012447 | MS.gene031592 | PPI |
| MS.gene012447 | MS.gene038603 | PPI |
| MS.gene012447 | MS.gene95835 | PPI |
| MS.gene012447 | MS.gene045478 | PPI |
| MS.gene012447 | MS.gene006702 | PPI |
| MS.gene012447 | MS.gene015639 | PPI |
| MS.gene012447 | MS.gene71003 | PPI |
| MS.gene012447 | MS.gene62674 | PPI |
| MS.gene012447 | MS.gene026499 | PPI |
| MS.gene012447 | MS.gene95324 | PPI |
| MS.gene012447 | MS.gene009143 | PPI |
| MS.gene012447 | MS.gene83030 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012447.t1 | MTR_4g129270 | 96.929 | 814 | 21 | 1 | 1 | 810 | 32 | 845 | 0.0 | 1639 |
| MS.gene012447.t1 | MTR_4g129270 | 96.814 | 722 | 19 | 1 | 1 | 718 | 32 | 753 | 0.0 | 1455 |
| MS.gene012447.t1 | MTR_8g063790 | 61.995 | 792 | 287 | 5 | 24 | 805 | 52 | 839 | 0.0 | 1035 |
| MS.gene012447.t1 | MTR_1g109620 | 60.276 | 798 | 303 | 7 | 17 | 806 | 53 | 844 | 0.0 | 1004 |
| MS.gene012447.t1 | MTR_8g105740 | 58.685 | 806 | 314 | 8 | 12 | 803 | 47 | 847 | 0.0 | 998 |
| MS.gene012447.t1 | MTR_1g032730 | 59.273 | 798 | 306 | 8 | 24 | 807 | 61 | 853 | 0.0 | 991 |
| MS.gene012447.t1 | MTR_4g080160 | 58.503 | 788 | 311 | 6 | 26 | 803 | 67 | 848 | 0.0 | 973 |
| MS.gene012447.t1 | MTR_3g078210 | 53.448 | 754 | 339 | 6 | 46 | 793 | 5 | 752 | 0.0 | 810 |
| MS.gene012447.t1 | MTR_3g467030 | 46.269 | 603 | 284 | 7 | 27 | 623 | 1 | 569 | 4.47e-172 | 508 |
| MS.gene012447.t1 | MTR_0034s0170 | 35.458 | 753 | 427 | 20 | 24 | 756 | 83 | 796 | 2.57e-136 | 427 |
| MS.gene012447.t1 | MTR_2g073260 | 33.641 | 758 | 435 | 20 | 24 | 757 | 122 | 835 | 3.61e-133 | 420 |
| MS.gene012447.t1 | MTR_8g087910 | 40.741 | 324 | 178 | 7 | 23 | 344 | 74 | 385 | 5.08e-71 | 239 |
| MS.gene012447.t1 | MTR_8g087930 | 29.953 | 424 | 249 | 13 | 350 | 757 | 10 | 401 | 3.68e-50 | 185 |
| MS.gene012447.t1 | MTR_3g076810 | 46.154 | 156 | 74 | 4 | 6 | 154 | 17 | 169 | 1.92e-34 | 129 |
| MS.gene012447.t1 | MTR_3g467040 | 45.133 | 113 | 61 | 1 | 448 | 559 | 110 | 222 | 1.35e-26 | 109 |
| MS.gene012447.t1 | MTR_3g467040 | 38.793 | 116 | 69 | 1 | 271 | 386 | 1 | 114 | 7.41e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012447.t1 | AT2G18700 | 66.456 | 790 | 252 | 6 | 24 | 803 | 49 | 835 | 0.0 | 1104 |
| MS.gene012447.t1 | AT1G23870 | 60.656 | 793 | 298 | 5 | 24 | 806 | 58 | 846 | 0.0 | 1034 |
| MS.gene012447.t1 | AT1G70290 | 60.483 | 787 | 294 | 7 | 24 | 800 | 56 | 835 | 0.0 | 999 |
| MS.gene012447.t1 | AT4G17770 | 59.264 | 788 | 308 | 5 | 26 | 804 | 61 | 844 | 0.0 | 992 |
| MS.gene012447.t1 | AT4G17770 | 59.264 | 788 | 308 | 5 | 26 | 804 | 61 | 844 | 0.0 | 992 |
| MS.gene012447.t1 | AT1G60140 | 58.177 | 801 | 316 | 6 | 14 | 804 | 53 | 844 | 0.0 | 989 |
| MS.gene012447.t1 | AT1G60140 | 58.177 | 801 | 316 | 6 | 14 | 804 | 53 | 844 | 0.0 | 989 |
| MS.gene012447.t1 | AT1G60140 | 58.177 | 801 | 316 | 6 | 14 | 804 | 53 | 844 | 0.0 | 989 |
| MS.gene012447.t1 | AT1G60140 | 58.177 | 801 | 316 | 6 | 14 | 804 | 53 | 844 | 0.0 | 989 |
| MS.gene012447.t1 | AT1G60140 | 58.177 | 801 | 316 | 6 | 14 | 804 | 53 | 844 | 0.0 | 989 |
| MS.gene012447.t1 | AT1G06410 | 57.915 | 796 | 314 | 8 | 26 | 810 | 60 | 845 | 0.0 | 973 |
| MS.gene012447.t1 | AT1G06410 | 57.915 | 796 | 314 | 8 | 26 | 810 | 60 | 845 | 0.0 | 973 |
| MS.gene012447.t1 | AT1G06410 | 57.915 | 796 | 314 | 8 | 26 | 810 | 60 | 845 | 0.0 | 973 |
| MS.gene012447.t1 | AT1G68020 | 57.284 | 810 | 315 | 8 | 21 | 803 | 49 | 854 | 0.0 | 968 |
| MS.gene012447.t1 | AT1G68020 | 57.284 | 810 | 315 | 8 | 21 | 803 | 49 | 854 | 0.0 | 968 |
| MS.gene012447.t1 | AT1G70290 | 55.909 | 787 | 292 | 8 | 24 | 800 | 56 | 797 | 0.0 | 899 |
| MS.gene012447.t1 | AT1G60140 | 59.494 | 711 | 273 | 5 | 14 | 718 | 53 | 754 | 0.0 | 898 |
| MS.gene012447.t1 | AT1G68020 | 57.638 | 635 | 242 | 7 | 21 | 632 | 49 | 679 | 0.0 | 769 |
| MS.gene012447.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 8.94e-135 | 424 |
| MS.gene012447.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 8.94e-135 | 424 |
| MS.gene012447.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 8.94e-135 | 424 |
| MS.gene012447.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 8.94e-135 | 424 |
| MS.gene012447.t1 | AT1G16980 | 32.799 | 811 | 478 | 21 | 24 | 808 | 11 | 780 | 2.52e-134 | 419 |
| MS.gene012447.t1 | AT4G27550 | 31.790 | 821 | 472 | 20 | 24 | 799 | 3 | 780 | 3.71e-126 | 397 |
| MS.gene012447.t1 | AT4G27550 | 31.630 | 822 | 481 | 20 | 24 | 799 | 3 | 789 | 3.64e-125 | 394 |
| MS.gene012447.t1 | AT1G16980 | 33.805 | 636 | 368 | 16 | 22 | 645 | 9 | 603 | 1.43e-110 | 352 |
Find 163 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGGGAAGGTTCTGATTT+TGG | 0.120895 | 8.3:+2279947 | MS.gene012447:CDS |
| CAAGAAGCAGATCCTGATTT+TGG | 0.199178 | 8.3:+2281225 | MS.gene012447:CDS |
| ATGATCCTGTAGTAGTTAAA+AGG | 0.228717 | 8.3:+2281298 | MS.gene012447:CDS |
| ATTCTTCGTTTACGAGAAAT+TGG | 0.240051 | 8.3:-2279123 | None:intergenic |
| ATATTTGTCATTAACTTCTT+TGG | 0.249338 | 8.3:-2280144 | None:intergenic |
| AATATTGTCGTTGAAACTTC+TGG | 0.252033 | 8.3:-2279077 | None:intergenic |
| TTTGGCATTGAGAAATCTTT+TGG | 0.258875 | 8.3:+2280013 | MS.gene012447:CDS |
| TGGAGGGGAATGAGAAATTA+AGG | 0.263134 | 8.3:+2280033 | MS.gene012447:CDS |
| CAAGTGTTTGCATGCACTAT+TGG | 0.286479 | 8.3:+2281844 | MS.gene012447:CDS |
| TTCACTCAGCGGGGCGGTTC+GGG | 0.301816 | 8.3:+2280418 | MS.gene012447:CDS |
| CTTCACTCAGCGGGGCGGTT+CGG | 0.306761 | 8.3:+2280417 | MS.gene012447:CDS |
| CTCTCATGACGTAGCGTATT+GGG | 0.309302 | 8.3:+2280547 | MS.gene012447:CDS |
| TGCGTTTCAATTCTTCTCAT+TGG | 0.309786 | 8.3:+2279463 | MS.gene012447:CDS |
| TTGGATTTGTTCAAAGGTAT+TGG | 0.319105 | 8.3:+2279981 | MS.gene012447:CDS |
| AAGTAGGGCTAAATACTATT+TGG | 0.326557 | 8.3:+2281876 | MS.gene012447:CDS |
| GTTTCTGTAAGCATTATCTT+TGG | 0.328259 | 8.3:+2279397 | MS.gene012447:CDS |
| AATTAACAAAGCTCCTAGTT+TGG | 0.333947 | 8.3:+2280778 | MS.gene012447:CDS |
| GGTTCATGATTATCATCTAA+TGG | 0.341092 | 8.3:+2279563 | MS.gene012447:CDS |
| AAAGAAGTTAATGACAAATA+TGG | 0.343946 | 8.3:+2280146 | MS.gene012447:CDS |
| TGGATTTGTTCAAAGGTATT+GGG | 0.345683 | 8.3:+2279982 | MS.gene012447:CDS |
| AGGCCAATTGTTTGTATAAA+CGG | 0.358705 | 8.3:+2280188 | MS.gene012447:CDS |
| AATACAGTGTTCATTGTTAG+TGG | 0.360290 | 8.3:+2280842 | MS.gene012447:CDS |
| TTTAACTACTACAGGATCAT+TGG | 0.373736 | 8.3:-2281295 | None:intergenic |
| ATCATTGTTTCTGAGTTCAT+TGG | 0.382781 | 8.3:+2280386 | MS.gene012447:CDS |
| TAGACAAGGAAGTGTTGAAT+TGG | 0.390593 | 8.3:+2280319 | MS.gene012447:CDS |
| GAAACGCACACCTTGACTCT+TGG | 0.391806 | 8.3:-2279448 | None:intergenic |
| AAATACTATTTGGATGATAC+TGG | 0.392235 | 8.3:+2281886 | MS.gene012447:CDS |
| GCTTGCCACAGTCCAAAATC+AGG | 0.397022 | 8.3:-2281237 | None:intergenic |
| ATCCTGATGAAGATTATGTT+TGG | 0.404447 | 8.3:+2279541 | MS.gene012447:CDS |
| CCTAGACATAGAAGAAAATC+TGG | 0.408487 | 8.3:-2281757 | None:intergenic |
| GCAACTTCTTCTTGTTGTGA+TGG | 0.411196 | 8.3:-2279300 | None:intergenic |
| CTCAAGATATATGTGGGATT+AGG | 0.419772 | 8.3:+2280617 | MS.gene012447:CDS |
| CTAAGTATTTCTTCACGAAC+AGG | 0.420112 | 8.3:-2279681 | None:intergenic |
| TTGTAGCAGGATGTTGGGTT+TGG | 0.421912 | 8.3:+2279770 | MS.gene012447:CDS |
| CAGTGTTCATTGTTAGTGGC+AGG | 0.422219 | 8.3:+2280846 | MS.gene012447:CDS |
| GACTGATGGCAGGTGGAGTA+AGG | 0.425232 | 8.3:+2281065 | MS.gene012447:intron |
| GGACCGTTTATACAAACAAT+TGG | 0.426572 | 8.3:-2280191 | None:intergenic |
| CTTGTCCGCGAAGATTCTAT+TGG | 0.432787 | 8.3:-2279502 | None:intergenic |
| TGCCAATCCGAGAGTCGTCC+AGG | 0.433203 | 8.3:-2281094 | None:intergenic |
| GCCTTCTCCTGAGTCGAAAC+CGG | 0.435832 | 8.3:-2280212 | None:intergenic |
| TGATGGCACCATGATGCCTC+AGG | 0.435835 | 8.3:+2280751 | MS.gene012447:CDS |
| AAATAGTATTTAGCCCTACT+TGG | 0.436019 | 8.3:-2281874 | None:intergenic |
| GTCTTGTTGTAGCAGGATGT+TGG | 0.445329 | 8.3:+2279764 | MS.gene012447:CDS |
| GCTCTCATGACGTAGCGTAT+TGG | 0.446089 | 8.3:+2280546 | MS.gene012447:CDS |
| TTGTTGAACTGTGATTTGAT+TGG | 0.446772 | 8.3:+2279708 | MS.gene012447:CDS |
| TGATCCTGTAGTAGTTAAAA+GGG | 0.447623 | 8.3:+2281299 | MS.gene012447:CDS |
| AAACGGTCCGGTTTCGACTC+AGG | 0.449305 | 8.3:+2280205 | MS.gene012447:CDS |
| GTTGTTCGCCTTCACTCAGC+GGG | 0.449644 | 8.3:+2280408 | MS.gene012447:CDS |
| CCACATGGGTCTTCTCGAAT+CGG | 0.450549 | 8.3:+2279872 | MS.gene012447:CDS |
| TACATTGGTGTTGATTACTT+TGG | 0.450702 | 8.3:+2279813 | MS.gene012447:CDS |
| TTGGAAAATTAATGTAGAAA+AGG | 0.451444 | 8.3:+2281128 | MS.gene012447:CDS |
| AGGATTTAGAGAGAGCTTGT+AGG | 0.454660 | 8.3:+2280585 | MS.gene012447:CDS |
| TCTTGTTGTAGCAGGATGTT+GGG | 0.455109 | 8.3:+2279765 | MS.gene012447:CDS |
| CTGTTCGTGAAGAAATACTT+AGG | 0.456072 | 8.3:+2279682 | MS.gene012447:CDS |
| GTGATGAACAATCTGGGTAT+AGG | 0.457022 | 8.3:+2280168 | MS.gene012447:CDS |
| GATGACTTGGATTTGTTCAA+AGG | 0.461719 | 8.3:+2279975 | MS.gene012447:CDS |
| GTTCTGTAGATTTCTGAAGT+AGG | 0.470644 | 8.3:-2279654 | None:intergenic |
| GGATTTAGAGAGAGCTTGTA+GGG | 0.471625 | 8.3:+2280586 | MS.gene012447:CDS |
| GAAGAAAGAATTTGAAGGGA+AGG | 0.471883 | 8.3:+2279935 | MS.gene012447:CDS |
| AAATATGGTGATGAACAATC+TGG | 0.477180 | 8.3:+2280161 | MS.gene012447:CDS |
| TTACGAGAAATTGGTGATGA+AGG | 0.479580 | 8.3:-2279114 | None:intergenic |
| TCCTGATGAAGATTATGTTT+GGG | 0.480347 | 8.3:+2279542 | MS.gene012447:CDS |
| CGTTGGTTCGTTAAAATCAC+AGG | 0.480855 | 8.3:+2279266 | MS.gene012447:CDS |
| CCCCACAGGAAGAATCTTGA+TGG | 0.481795 | 8.3:-2279847 | None:intergenic |
| TTGTGACTTGAAATTCGAAT+GGG | 0.482906 | 8.3:+2279182 | MS.gene012447:CDS |
| TTGGATTATGAGTCTAAAAG+AGG | 0.484605 | 8.3:+2279789 | MS.gene012447:CDS |
| CTTGTGACTTGAAATTCGAA+TGG | 0.485275 | 8.3:+2279181 | MS.gene012447:CDS |
| ACCCAAACATAATCTTCATC+AGG | 0.489582 | 8.3:-2279543 | None:intergenic |
| TGTTCACCTTGAGAGTATGC+TGG | 0.489913 | 8.3:+2281272 | MS.gene012447:CDS |
| GAACTCTGCAATCAAAATGA+AGG | 0.490743 | 8.3:+2280478 | MS.gene012447:CDS |
| AATTGTTTGTATAAACGGTC+CGG | 0.492336 | 8.3:+2280193 | MS.gene012447:CDS |
| TGGTCATGTTATCAGACTGC+TGG | 0.493365 | 8.3:+2281906 | MS.gene012447:CDS |
| TGACTTCTCCTCATTCCTCA+TGG | 0.494550 | 8.3:-2281734 | None:intergenic |
| ATTAAGGGGTGAAGTTGTGT+TGG | 0.495890 | 8.3:+2280049 | MS.gene012447:CDS |
| CGTCCTCTGAAACAGCTAAG+AGG | 0.495992 | 8.3:+2279901 | MS.gene012447:CDS |
| AGTTGAAGAAAGAATTTGAA+GGG | 0.498193 | 8.3:+2279931 | MS.gene012447:CDS |
| GTGTTCATTGTTAGTGGCAG+GGG | 0.498938 | 8.3:+2280848 | MS.gene012447:CDS |
| AAACGTTTCCTCAAGTAAGT+TGG | 0.499254 | 8.3:-2279591 | None:intergenic |
| TGGTGCCATCATAGTCCAAA+AGG | 0.499691 | 8.3:-2280739 | None:intergenic |
| TGTTCGTGAAGAAATACTTA+GGG | 0.500357 | 8.3:+2279683 | MS.gene012447:CDS |
| GTAGAGTTTGCCTTAGCGAC+TGG | 0.503290 | 8.3:+2280870 | MS.gene012447:CDS |
| GGAGGGGAATGAGAAATTAA+GGG | 0.505727 | 8.3:+2280034 | MS.gene012447:CDS |
| AAGTCACAAGAAGCGCGTAT+TGG | 0.516480 | 8.3:-2279168 | None:intergenic |
| CACTTGTGATGTGGTTGGTA+AGG | 0.520338 | 8.3:-2281827 | None:intergenic |
| TCCCTGGACGACTCTCGGAT+TGG | 0.522159 | 8.3:+2281092 | MS.gene012447:CDS |
| GTTGAATTGGACAAAGCCCT+TGG | 0.526550 | 8.3:+2280332 | MS.gene012447:CDS |
| GGGCGGTTCGGGTGAATCCG+TGG | 0.535674 | 8.3:+2280429 | MS.gene012447:CDS |
| TCTTCCTGTGGGGATCCACA+TGG | 0.539623 | 8.3:+2279857 | MS.gene012447:CDS |
| GATTCTCCCTGGACGACTCT+CGG | 0.545192 | 8.3:+2281087 | MS.gene012447:CDS |
| TTGTGAATGCTGTGAGGGAT+GGG | 0.545495 | 8.3:+2280264 | MS.gene012447:CDS |
| ACCATCAAGATTCTTCCTGT+GGG | 0.546402 | 8.3:+2279846 | MS.gene012447:CDS |
| GAGTAGCGGAAAAGATATCC+AGG | 0.550385 | 8.3:+2280094 | MS.gene012447:CDS |
| GCATTATCTCAAGATATATG+TGG | 0.551844 | 8.3:+2280610 | MS.gene012447:CDS |
| ATGGAGAAAACCAGTCGCTA+AGG | 0.553868 | 8.3:-2280880 | None:intergenic |
| TACCATCAAGATTCTTCCTG+TGG | 0.554669 | 8.3:+2279845 | MS.gene012447:CDS |
| TCCGGTTTCGACTCAGGAGA+AGG | 0.554779 | 8.3:+2280211 | MS.gene012447:CDS |
| CTTCCTGTGGGGATCCACAT+GGG | 0.555318 | 8.3:+2279858 | MS.gene012447:CDS |
| CACCCTCTTAGCTGTTTCAG+AGG | 0.556372 | 8.3:-2279904 | None:intergenic |
| CAATCTCAAACTTCACATCC+TGG | 0.558555 | 8.3:-2280112 | None:intergenic |
| CTATTGGTTATAAACCAAGT+AGG | 0.558755 | 8.3:+2281860 | MS.gene012447:CDS |
| TATTGTTGAAGTAAAACCTC+AGG | 0.563515 | 8.3:+2281329 | MS.gene012447:CDS |
| GAGTTGAAGAAAGAATTTGA+AGG | 0.566060 | 8.3:+2279930 | MS.gene012447:CDS |
| CGGAACATGGTTACTTCACA+AGG | 0.566380 | 8.3:+2280924 | MS.gene012447:CDS |
| TGATGAAGGAAGTGAAAGGT+TGG | 0.568415 | 8.3:-2279100 | None:intergenic |
| CTACAAACAGTATACTCGTA+AGG | 0.570286 | 8.3:-2280299 | None:intergenic |
| CAATAGAATCTTCGCGGACA+AGG | 0.570323 | 8.3:+2279503 | MS.gene012447:CDS |
| TCATTGGCTTGCATACAAGA+AGG | 0.571083 | 8.3:+2279479 | MS.gene012447:CDS |
| AGTGTTCATTGTTAGTGGCA+GGG | 0.574176 | 8.3:+2280847 | MS.gene012447:CDS |
| TTGGGTCTCTCTGCGGAACA+TGG | 0.575133 | 8.3:+2280911 | MS.gene012447:CDS |
| ATTGTGAATGCTGTGAGGGA+TGG | 0.578772 | 8.3:+2280263 | MS.gene012447:CDS |
| GAAGGCCAATAGAATCTTCG+CGG | 0.579668 | 8.3:+2279497 | MS.gene012447:CDS |
| TATATCAACCATGAGGAATG+AGG | 0.581492 | 8.3:+2281726 | MS.gene012447:CDS |
| TATTGGTTATAAACCAAGTA+GGG | 0.583751 | 8.3:+2281861 | MS.gene012447:CDS |
| AGACCCATGTGGATCCCCAC+AGG | 0.588284 | 8.3:-2279861 | None:intergenic |
| AGAGAGATAACATCCAAACT+AGG | 0.589770 | 8.3:-2280791 | None:intergenic |
| AAATCATTGTGAGTTTCAGA+AGG | 0.591816 | 8.3:-2279366 | None:intergenic |
| CGAACCGCCCCGCTGAGTGA+AGG | 0.592523 | 8.3:-2280416 | None:intergenic |
| AGACAAAGCTTCTTAAAACT+AGG | 0.593436 | 8.3:-2280671 | None:intergenic |
| AATATGGTGATGAACAATCT+GGG | 0.594049 | 8.3:+2280162 | MS.gene012447:CDS |
| GTCCTCTGAAACAGCTAAGA+GGG | 0.596114 | 8.3:+2279902 | MS.gene012447:CDS |
| AATTGATCCCTGAGGCATCA+TGG | 0.598853 | 8.3:-2280759 | None:intergenic |
| AATTAATGTAGAAAAGGTGA+TGG | 0.600049 | 8.3:+2281134 | MS.gene012447:CDS |
| CTTCGCGGACAAGGTTCGCG+AGG | 0.601412 | 8.3:+2279512 | MS.gene012447:CDS |
| CATTATCTCAAGATATATGT+GGG | 0.605992 | 8.3:+2280611 | MS.gene012447:CDS |
| TTCAGATTCTGAATCAAGCA+AGG | 0.606163 | 8.3:+2280072 | MS.gene012447:CDS |
| TGTGAGCAAAGGTAAAGTGG+TGG | 0.606477 | 8.3:+2281696 | MS.gene012447:CDS |
| GAGTCTAAAAGAGGTTACAT+TGG | 0.608056 | 8.3:+2279798 | MS.gene012447:CDS |
| GGTGGAGTAAGGATTCTCCC+TGG | 0.609902 | 8.3:+2281076 | MS.gene012447:intron |
| TGTCGTTGAAACTTCTGGAA+CGG | 0.610383 | 8.3:-2279072 | None:intergenic |
| CTACCTCTGTCCAAGAGTCA+AGG | 0.615244 | 8.3:+2279438 | MS.gene012447:CDS |
| CATTGGCCAGCATACTCTCA+AGG | 0.616590 | 8.3:-2281278 | None:intergenic |
| ATTGGACAAAGCCCTTGGAG+TGG | 0.616712 | 8.3:+2280337 | MS.gene012447:CDS |
| CTTTACACAGAAGCAACTGA+TGG | 0.620660 | 8.3:+2281159 | MS.gene012447:CDS |
| GGGTGTGAGCAAAGGTAAAG+TGG | 0.624595 | 8.3:+2281693 | MS.gene012447:intron |
| CTGAATCAAGCAAGGAGTAG+CGG | 0.626177 | 8.3:+2280080 | MS.gene012447:CDS |
| GAGAGACCCAATTTGTCACA+TGG | 0.627574 | 8.3:-2280899 | None:intergenic |
| GTTCGTGAAGAAATACTTAG+GGG | 0.627972 | 8.3:+2279684 | MS.gene012447:CDS |
| GGTAGCATGTAGTGAAACAA+AGG | 0.628237 | 8.3:-2279420 | None:intergenic |
| TTCGCCTTCACTCAGCGGGG+CGG | 0.628380 | 8.3:+2280412 | MS.gene012447:CDS |
| GATGGCACCATGATGCCTCA+GGG | 0.629851 | 8.3:+2280752 | MS.gene012447:CDS |
| GCCAATCCGAGAGTCGTCCA+GGG | 0.630314 | 8.3:-2281093 | None:intergenic |
| GAGTATACTGTTTGTAGACA+AGG | 0.631640 | 8.3:+2280305 | MS.gene012447:CDS |
| GGTTGTTCGCCTTCACTCAG+CGG | 0.632472 | 8.3:+2280407 | MS.gene012447:CDS |
| ACACCTTGACTCTTGGACAG+AGG | 0.637733 | 8.3:-2279441 | None:intergenic |
| TTGCATTGTGAATGCTGTGA+GGG | 0.638559 | 8.3:+2280259 | MS.gene012447:CDS |
| GAAACATCGTCAATGTTCCA+CGG | 0.640645 | 8.3:-2280446 | None:intergenic |
| CCTTGGAGTGGAAAATGATG+AGG | 0.642829 | 8.3:+2280349 | MS.gene012447:CDS |
| CATGTTATCAGACTGCTGGA+AGG | 0.643775 | 8.3:+2281910 | MS.gene012447:CDS |
| GAGGGGAATGAGAAATTAAG+GGG | 0.646856 | 8.3:+2280035 | MS.gene012447:CDS |
| TTTGGTATCTCTGTAAGCAG+GGG | 0.647241 | 8.3:-2280705 | None:intergenic |
| AGGATTCCGAAAAGCAATTG+CGG | 0.647354 | 8.3:+2280498 | MS.gene012447:CDS |
| CCATCAAGATTCTTCCTGTG+GGG | 0.659257 | 8.3:+2279847 | MS.gene012447:CDS |
| GCAAACACTTGTGATGTGGT+TGG | 0.661634 | 8.3:-2281832 | None:intergenic |
| GATCCTGTAGTAGTTAAAAG+GGG | 0.670223 | 8.3:+2281300 | MS.gene012447:CDS |
| TGACAAATTGGGTCTCTCTG+CGG | 0.676406 | 8.3:+2280904 | MS.gene012447:CDS |
| GAAATGCAGGGTGTGAGCAA+AGG | 0.693831 | 8.3:+2281685 | MS.gene012447:intron |
| GCATGCAAACACTTGTGATG+TGG | 0.707983 | 8.3:-2281836 | None:intergenic |
| TTGGTGATGAAGGAAGTGAA+AGG | 0.728881 | 8.3:-2279104 | None:intergenic |
| GTTGCATTGTGAATGCTGTG+AGG | 0.729569 | 8.3:+2280258 | MS.gene012447:CDS |
| AAGAGCTTATATCAACCATG+AGG | 0.738943 | 8.3:+2281719 | MS.gene012447:CDS |
| GCTTTGTTAATTGATCCCTG+AGG | 0.743258 | 8.3:-2280767 | None:intergenic |
| CCGATTCGAGAAGACCCATG+TGG | 0.743893 | 8.3:-2279872 | None:intergenic |
| TTGTTCGCCTTCACTCAGCG+GGG | 0.757164 | 8.3:+2280409 | MS.gene012447:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGTTTAATTTTCATACA+CGG | - | chr8.3:2281636-2281655 | None:intergenic | 15.0% |
| !!! | TTAAACTTTTTCTTTTGTAA+TGG | + | chr8.3:2281646-2281665 | MS.gene012447:intron | 15.0% |
| !! | AAAGAAGTTAATGACAAATA+TGG | + | chr8.3:2280146-2280165 | MS.gene012447:CDS | 20.0% |
| !! | ATATTTGTCATTAACTTCTT+TGG | - | chr8.3:2280147-2280166 | None:intergenic | 20.0% |
| !! | CGAATAATTAATCTTTCATT+TGG | - | chr8.3:2281417-2281436 | None:intergenic | 20.0% |
| !! | TTGGAAAATTAATGTAGAAA+AGG | + | chr8.3:2281128-2281147 | MS.gene012447:CDS | 20.0% |
| !!! | AAACTTTTCTAACAAAACTT+TGG | - | chr8.3:2279325-2279344 | None:intergenic | 20.0% |
| !!! | TAATTTTAGAATCATTGCTT+TGG | + | chr8.3:2280646-2280665 | MS.gene012447:CDS | 20.0% |
| !!! | TATTCGTTTTATGATTTCAT+TGG | + | chr8.3:2281431-2281450 | MS.gene012447:intron | 20.0% |
| !!! | TTACTTGTTGATTCATTTTA+TGG | + | chr8.3:2281032-2281051 | MS.gene012447:intron | 20.0% |
| ! | AAAAAACCCAATTTCACTTT+AGG | - | chr8.3:2279618-2279637 | None:intergenic | 25.0% |
| ! | AAATACTATTTGGATGATAC+TGG | + | chr8.3:2281886-2281905 | MS.gene012447:CDS | 25.0% |
| ! | AATTAATGTAGAAAAGGTGA+TGG | + | chr8.3:2281134-2281153 | MS.gene012447:CDS | 25.0% |
| ! | AGTTGAAGAAAGAATTTGAA+GGG | + | chr8.3:2279931-2279950 | MS.gene012447:CDS | 25.0% |
| ! | CATTATCTCAAGATATATGT+GGG | + | chr8.3:2280611-2280630 | MS.gene012447:CDS | 25.0% |
| ! | GTCAATTAGAATTAGAATGA+AGG | + | chr8.3:2281453-2281472 | MS.gene012447:intron | 25.0% |
| ! | TTGTTTATTTATGATACCTG+AGG | - | chr8.3:2281348-2281367 | None:intergenic | 25.0% |
| !! | AACAATGAACACTGTATTTT+TGG | - | chr8.3:2280840-2280859 | None:intergenic | 25.0% |
| !! | ACAATGAACACTGTATTTTT+GGG | - | chr8.3:2280839-2280858 | None:intergenic | 25.0% |
| !! | ACTATCTTTTTCTTCAATGA+AGG | - | chr8.3:2281187-2281206 | None:intergenic | 25.0% |
| !! | ACTCACAATGATTTTTATCA+TGG | + | chr8.3:2279375-2279394 | MS.gene012447:CDS | 25.0% |
| !! | ATATATTTTCAGCTCAAAGA+CGG | + | chr8.3:2279216-2279235 | MS.gene012447:CDS | 25.0% |
| !! | TATTGGTTATAAACCAAGTA+GGG | + | chr8.3:2281861-2281880 | MS.gene012447:CDS | 25.0% |
| !!! | TTGTATTTTTGTGAAATGCA+GGG | + | chr8.3:2281673-2281692 | MS.gene012447:intron | 25.0% |
| AAAAAGATAGTGCAATGGTT+TGG | + | chr8.3:2281196-2281215 | MS.gene012447:CDS | 30.0% | |
| AAATAGTATTTAGCCCTACT+TGG | - | chr8.3:2281877-2281896 | None:intergenic | 30.0% | |
| AAATCATTGTGAGTTTCAGA+AGG | - | chr8.3:2279369-2279388 | None:intergenic | 30.0% | |
| AAGTAGGGCTAAATACTATT+TGG | + | chr8.3:2281876-2281895 | MS.gene012447:CDS | 30.0% | |
| AATACAGTGTTCATTGTTAG+TGG | + | chr8.3:2280842-2280861 | MS.gene012447:CDS | 30.0% | |
| AATATTGTCGTTGAAACTTC+TGG | - | chr8.3:2279080-2279099 | None:intergenic | 30.0% | |
| AATTAACAAAGCTCCTAGTT+TGG | + | chr8.3:2280778-2280797 | MS.gene012447:CDS | 30.0% | |
| AATTGTTTGTATAAACGGTC+CGG | + | chr8.3:2280193-2280212 | MS.gene012447:CDS | 30.0% | |
| ACCTTGAAAAAACTCAAGAA+AGG | - | chr8.3:2281512-2281531 | None:intergenic | 30.0% | |
| AGACAAAGCTTCTTAAAACT+AGG | - | chr8.3:2280674-2280693 | None:intergenic | 30.0% | |
| AGGCCAATTGTTTGTATAAA+CGG | + | chr8.3:2280188-2280207 | MS.gene012447:CDS | 30.0% | |
| ATCCTGATGAAGATTATGTT+TGG | + | chr8.3:2279541-2279560 | MS.gene012447:CDS | 30.0% | |
| ATGATCCTGTAGTAGTTAAA+AGG | + | chr8.3:2281298-2281317 | MS.gene012447:CDS | 30.0% | |
| ATTCTTCGTTTACGAGAAAT+TGG | - | chr8.3:2279126-2279145 | None:intergenic | 30.0% | |
| GAGTTGAAGAAAGAATTTGA+AGG | + | chr8.3:2279930-2279949 | MS.gene012447:CDS | 30.0% | |
| GCATTATCTCAAGATATATG+TGG | + | chr8.3:2280610-2280629 | MS.gene012447:CDS | 30.0% | |
| GGTTCATGATTATCATCTAA+TGG | + | chr8.3:2279563-2279582 | MS.gene012447:CDS | 30.0% | |
| GTTTCAGAAGGTAAAAAAGT+TGG | - | chr8.3:2279357-2279376 | None:intergenic | 30.0% | |
| GTTTCTGTAAGCATTATCTT+TGG | + | chr8.3:2279397-2279416 | MS.gene012447:CDS | 30.0% | |
| TATTGTTGAAGTAAAACCTC+AGG | + | chr8.3:2281329-2281348 | MS.gene012447:CDS | 30.0% | |
| TCCTGATGAAGATTATGTTT+GGG | + | chr8.3:2279542-2279561 | MS.gene012447:CDS | 30.0% | |
| TGAAGAAAAAGATAGTGCAA+TGG | + | chr8.3:2281191-2281210 | MS.gene012447:CDS | 30.0% | |
| TGATCCTGTAGTAGTTAAAA+GGG | + | chr8.3:2281299-2281318 | MS.gene012447:CDS | 30.0% | |
| TGTTCGTGAAGAAATACTTA+GGG | + | chr8.3:2279683-2279702 | MS.gene012447:CDS | 30.0% | |
| TTGGATTATGAGTCTAAAAG+AGG | + | chr8.3:2279789-2279808 | MS.gene012447:CDS | 30.0% | |
| TTGTGACTTGAAATTCGAAT+GGG | + | chr8.3:2279182-2279201 | MS.gene012447:CDS | 30.0% | |
| TTGTTGAACTGTGATTTGAT+TGG | + | chr8.3:2279708-2279727 | MS.gene012447:CDS | 30.0% | |
| TTTAACTACTACAGGATCAT+TGG | - | chr8.3:2281298-2281317 | None:intergenic | 30.0% | |
| ! | AAATATGGTGATGAACAATC+TGG | + | chr8.3:2280161-2280180 | MS.gene012447:CDS | 30.0% |
| ! | AATATGGTGATGAACAATCT+GGG | + | chr8.3:2280162-2280181 | MS.gene012447:CDS | 30.0% |
| ! | ACGTTTTCCTAAAGTGAAAT+TGG | + | chr8.3:2279608-2279627 | MS.gene012447:CDS | 30.0% |
| ! | CGTTTTCCTAAAGTGAAATT+GGG | + | chr8.3:2279609-2279628 | MS.gene012447:CDS | 30.0% |
| ! | CTATTGGTTATAAACCAAGT+AGG | + | chr8.3:2281860-2281879 | MS.gene012447:CDS | 30.0% |
| ! | TTGGATTTGTTCAAAGGTAT+TGG | + | chr8.3:2279981-2280000 | MS.gene012447:CDS | 30.0% |
| ! | TTTTCTCCATGTGACAAATT+GGG | + | chr8.3:2280893-2280912 | MS.gene012447:CDS | 30.0% |
| !! | ATCATTGTTTCTGAGTTCAT+TGG | + | chr8.3:2280386-2280405 | MS.gene012447:CDS | 30.0% |
| !! | CTTGTATTTTTGTGAAATGC+AGG | + | chr8.3:2281672-2281691 | MS.gene012447:intron | 30.0% |
| !! | TACATTGGTGTTGATTACTT+TGG | + | chr8.3:2279813-2279832 | MS.gene012447:CDS | 30.0% |
| !! | TGGATTTGTTCAAAGGTATT+GGG | + | chr8.3:2279982-2280001 | MS.gene012447:CDS | 30.0% |
| !! | TTTGGCATTGAGAAATCTTT+TGG | + | chr8.3:2280013-2280032 | MS.gene012447:CDS | 30.0% |
| !!! | ATTTTTTGTCTTGTTGTAGC+AGG | + | chr8.3:2279757-2279776 | MS.gene012447:CDS | 30.0% |
| !!! | GATTCTGAAATCTTTTACGT+TGG | + | chr8.3:2279249-2279268 | MS.gene012447:CDS | 30.0% |
| !!! | TCCTTTCTTGAGTTTTTTCA+AGG | + | chr8.3:2281508-2281527 | MS.gene012447:intron | 30.0% |
| AAACGTTTCCTCAAGTAAGT+TGG | - | chr8.3:2279594-2279613 | None:intergenic | 35.0% | |
| AAGAGCTTATATCAACCATG+AGG | + | chr8.3:2281719-2281738 | MS.gene012447:CDS | 35.0% | |
| ACCCAAACATAATCTTCATC+AGG | - | chr8.3:2279546-2279565 | None:intergenic | 35.0% | |
| AGAGAGATAACATCCAAACT+AGG | - | chr8.3:2280794-2280813 | None:intergenic | 35.0% | |
| CCTAGACATAGAAGAAAATC+TGG | - | chr8.3:2281760-2281779 | None:intergenic | 35.0% | |
| CTAAGTATTTCTTCACGAAC+AGG | - | chr8.3:2279684-2279703 | None:intergenic | 35.0% | |
| CTACAAACAGTATACTCGTA+AGG | - | chr8.3:2280302-2280321 | None:intergenic | 35.0% | |
| CTCAAGATATATGTGGGATT+AGG | + | chr8.3:2280617-2280636 | MS.gene012447:CDS | 35.0% | |
| CTGTTCGTGAAGAAATACTT+AGG | + | chr8.3:2279682-2279701 | MS.gene012447:CDS | 35.0% | |
| CTTACAGAGATACCAAAAAC+AGG | + | chr8.3:2280711-2280730 | MS.gene012447:CDS | 35.0% | |
| CTTGTGACTTGAAATTCGAA+TGG | + | chr8.3:2279181-2279200 | MS.gene012447:CDS | 35.0% | |
| GAACTCTGCAATCAAAATGA+AGG | + | chr8.3:2280478-2280497 | MS.gene012447:CDS | 35.0% | |
| GAAGAAAGAATTTGAAGGGA+AGG | + | chr8.3:2279935-2279954 | MS.gene012447:CDS | 35.0% | |
| GAGTATACTGTTTGTAGACA+AGG | + | chr8.3:2280305-2280324 | MS.gene012447:CDS | 35.0% | |
| GAGTCTAAAAGAGGTTACAT+TGG | + | chr8.3:2279798-2279817 | MS.gene012447:CDS | 35.0% | |
| GATCCTGTAGTAGTTAAAAG+GGG | + | chr8.3:2281300-2281319 | MS.gene012447:CDS | 35.0% | |
| GGACCGTTTATACAAACAAT+TGG | - | chr8.3:2280194-2280213 | None:intergenic | 35.0% | |
| GTTCGTGAAGAAATACTTAG+GGG | + | chr8.3:2279684-2279703 | MS.gene012447:CDS | 35.0% | |
| TATATCAACCATGAGGAATG+AGG | + | chr8.3:2281726-2281745 | MS.gene012447:CDS | 35.0% | |
| TGCGTTTCAATTCTTCTCAT+TGG | + | chr8.3:2279463-2279482 | MS.gene012447:CDS | 35.0% | |
| TTCAGATTCTGAATCAAGCA+AGG | + | chr8.3:2280072-2280091 | MS.gene012447:CDS | 35.0% | |
| TTGTCAATGTTGCATGATCT+TGG | + | chr8.3:2281001-2281020 | MS.gene012447:intron | 35.0% | |
| ! | CAAAAGGATCAACCTGTTTT+TGG | - | chr8.3:2280726-2280745 | None:intergenic | 35.0% |
| ! | CCAGATTTTCTTCTATGTCT+AGG | + | chr8.3:2281757-2281776 | MS.gene012447:CDS | 35.0% |
| ! | GATGACTTGGATTTGTTCAA+AGG | + | chr8.3:2279975-2279994 | MS.gene012447:CDS | 35.0% |
| ! | GCATTGAGAAATCTTTTGGA+GGG | + | chr8.3:2280017-2280036 | MS.gene012447:CDS | 35.0% |
| ! | GTTTTCTCCATGTGACAAAT+TGG | + | chr8.3:2280892-2280911 | MS.gene012447:CDS | 35.0% |
| ! | TTGATCCTTTTGGACTATGA+TGG | + | chr8.3:2280734-2280753 | MS.gene012447:CDS | 35.0% |
| ! | TTTTGGTATCTCTGTAAGCA+GGG | - | chr8.3:2280709-2280728 | None:intergenic | 35.0% |
| !! | ATGGATTCCTTTTTGACTGA+TGG | + | chr8.3:2281051-2281070 | MS.gene012447:intron | 35.0% |
| !! | CATTGAGAAATCTTTTGGAG+GGG | + | chr8.3:2280018-2280037 | MS.gene012447:CDS | 35.0% |
| !! | GATTGGCATCAGATTTTGAT+TGG | + | chr8.3:2281109-2281128 | MS.gene012447:CDS | 35.0% |
| !! | GTTCTGTAGATTTCTGAAGT+AGG | - | chr8.3:2279657-2279676 | None:intergenic | 35.0% |
| !! | TAGACAAGGAAGTGTTGAAT+TGG | + | chr8.3:2280319-2280338 | MS.gene012447:CDS | 35.0% |
| !! | TGGTTTTACCAACTTACTTG+AGG | + | chr8.3:2279583-2279602 | MS.gene012447:CDS | 35.0% |
| !! | TTACGAGAAATTGGTGATGA+AGG | - | chr8.3:2279117-2279136 | None:intergenic | 35.0% |
| !! | TTTTTGGTATCTCTGTAAGC+AGG | - | chr8.3:2280710-2280729 | None:intergenic | 35.0% |
| !!! | AGGTATTGGGTTGAAGTTTT+TGG | + | chr8.3:2279995-2280014 | MS.gene012447:CDS | 35.0% |
| !!! | ATTTTTGGGATCACTGCATA+AGG | - | chr8.3:2280825-2280844 | None:intergenic | 35.0% |
| !!! | CAAAAACAGGTTGATCCTTT+TGG | + | chr8.3:2280724-2280743 | MS.gene012447:CDS | 35.0% |
| ACCATCAAGATTCTTCCTGT+GGG | + | chr8.3:2279846-2279865 | MS.gene012447:CDS | 40.0% | |
| AGGATTCCGAAAAGCAATTG+CGG | + | chr8.3:2280498-2280517 | MS.gene012447:CDS | 40.0% | |
| AGGATTTAGAGAGAGCTTGT+AGG | + | chr8.3:2280585-2280604 | MS.gene012447:CDS | 40.0% | |
| AGTGTTCATTGTTAGTGGCA+GGG | + | chr8.3:2280847-2280866 | MS.gene012447:CDS | 40.0% | |
| ATTAAGGGGTGAAGTTGTGT+TGG | + | chr8.3:2280049-2280068 | MS.gene012447:CDS | 40.0% | |
| CAAGTGTTTGCATGCACTAT+TGG | + | chr8.3:2281844-2281863 | MS.gene012447:CDS | 40.0% | |
| CAATCTCAAACTTCACATCC+TGG | - | chr8.3:2280115-2280134 | None:intergenic | 40.0% | |
| CTTTACACAGAAGCAACTGA+TGG | + | chr8.3:2281159-2281178 | MS.gene012447:CDS | 40.0% | |
| GAAACATCGTCAATGTTCCA+CGG | - | chr8.3:2280449-2280468 | None:intergenic | 40.0% | |
| GAGGGGAATGAGAAATTAAG+GGG | + | chr8.3:2280035-2280054 | MS.gene012447:CDS | 40.0% | |
| GGAGGGGAATGAGAAATTAA+GGG | + | chr8.3:2280034-2280053 | MS.gene012447:CDS | 40.0% | |
| GGATTTAGAGAGAGCTTGTA+GGG | + | chr8.3:2280586-2280605 | MS.gene012447:CDS | 40.0% | |
| GGTAGCATGTAGTGAAACAA+AGG | - | chr8.3:2279423-2279442 | None:intergenic | 40.0% | |
| GTGATGAACAATCTGGGTAT+AGG | + | chr8.3:2280168-2280187 | MS.gene012447:CDS | 40.0% | |
| TACCATCAAGATTCTTCCTG+TGG | + | chr8.3:2279845-2279864 | MS.gene012447:CDS | 40.0% | |
| TGATGAAGGAAGTGAAAGGT+TGG | - | chr8.3:2279103-2279122 | None:intergenic | 40.0% | |
| TGGAGGGGAATGAGAAATTA+AGG | + | chr8.3:2280033-2280052 | MS.gene012447:CDS | 40.0% | |
| TTGCATTGTGAATGCTGTGA+GGG | + | chr8.3:2280259-2280278 | MS.gene012447:CDS | 40.0% | |
| TTTGGTATCTCTGTAAGCAG+GGG | - | chr8.3:2280708-2280727 | None:intergenic | 40.0% | |
| ! | CAAGAAGCAGATCCTGATTT+TGG | + | chr8.3:2281225-2281244 | MS.gene012447:CDS | 40.0% |
| ! | CTCATCATTTTCCACTCCAA+GGG | - | chr8.3:2280351-2280370 | None:intergenic | 40.0% |
| ! | GCAACTTCTTCTTGTTGTGA+TGG | - | chr8.3:2279303-2279322 | None:intergenic | 40.0% |
| ! | GCTTTGTTAATTGATCCCTG+AGG | - | chr8.3:2280770-2280789 | None:intergenic | 40.0% |
| ! | TCTTGTTGTAGCAGGATGTT+GGG | + | chr8.3:2279765-2279784 | MS.gene012447:CDS | 40.0% |
| ! | TGTCGTTGAAACTTCTGGAA+CGG | - | chr8.3:2279075-2279094 | None:intergenic | 40.0% |
| !! | AAGGGAAGGTTCTGATTTTG+GGG | + | chr8.3:2279949-2279968 | MS.gene012447:CDS | 40.0% |
| !! | ATTCCTTTTTGACTGATGGC+AGG | + | chr8.3:2281055-2281074 | MS.gene012447:intron | 40.0% |
| !! | CGTTGGTTCGTTAAAATCAC+AGG | + | chr8.3:2279266-2279285 | MS.gene012447:CDS | 40.0% |
| !! | GAAGGGAAGGTTCTGATTTT+GGG | + | chr8.3:2279948-2279967 | MS.gene012447:CDS | 40.0% |
| !! | GGCATTGAGAAATCTTTTGG+AGG | + | chr8.3:2280016-2280035 | MS.gene012447:CDS | 40.0% |
| !! | TCATTGGCTTGCATACAAGA+AGG | + | chr8.3:2279479-2279498 | MS.gene012447:CDS | 40.0% |
| !! | TGAAGGGAAGGTTCTGATTT+TGG | + | chr8.3:2279947-2279966 | MS.gene012447:CDS | 40.0% |
| !! | TGTCCCCTTTTAACTACTAC+AGG | - | chr8.3:2281306-2281325 | None:intergenic | 40.0% |
| !! | TTGGGCTAAGAGTTTTGATC+AGG | + | chr8.3:2280565-2280584 | MS.gene012447:CDS | 40.0% |
| !! | TTGGTGATGAAGGAAGTGAA+AGG | - | chr8.3:2279107-2279126 | None:intergenic | 40.0% |
| ATGGAGAAAACCAGTCGCTA+AGG | - | chr8.3:2280883-2280902 | None:intergenic | 45.0% | |
| ATTGTGAATGCTGTGAGGGA+TGG | + | chr8.3:2280263-2280282 | MS.gene012447:CDS | 45.0% | |
| CAATAGAATCTTCGCGGACA+AGG | + | chr8.3:2279503-2279522 | MS.gene012447:CDS | 45.0% | |
| CAGTGTTCATTGTTAGTGGC+AGG | + | chr8.3:2280846-2280865 | MS.gene012447:CDS | 45.0% | |
| CATGTTATCAGACTGCTGGA+AGG | + | chr8.3:2281910-2281929 | MS.gene012447:CDS | 45.0% | |
| CCATCAAGATTCTTCCTGTG+GGG | + | chr8.3:2279847-2279866 | MS.gene012447:CDS | 45.0% | |
| CCTTGGAGTGGAAAATGATG+AGG | + | chr8.3:2280349-2280368 | MS.gene012447:CDS | 45.0% | |
| CGGAACATGGTTACTTCACA+AGG | + | chr8.3:2280924-2280943 | MS.gene012447:CDS | 45.0% | |
| CTCTCATGACGTAGCGTATT+GGG | + | chr8.3:2280547-2280566 | MS.gene012447:CDS | 45.0% | |
| CTGAATCAAGCAAGGAGTAG+CGG | + | chr8.3:2280080-2280099 | MS.gene012447:CDS | 45.0% | |
| CTTGTCCGCGAAGATTCTAT+TGG | - | chr8.3:2279505-2279524 | None:intergenic | 45.0% | |
| GAAGGCCAATAGAATCTTCG+CGG | + | chr8.3:2279497-2279516 | MS.gene012447:CDS | 45.0% | |
| GAGAGACCCAATTTGTCACA+TGG | - | chr8.3:2280902-2280921 | None:intergenic | 45.0% | |
| GCAAACACTTGTGATGTGGT+TGG | - | chr8.3:2281835-2281854 | None:intergenic | 45.0% | |
| GCATGCAAACACTTGTGATG+TGG | - | chr8.3:2281839-2281858 | None:intergenic | 45.0% | |
| GTGTTCATTGTTAGTGGCAG+GGG | + | chr8.3:2280848-2280867 | MS.gene012447:CDS | 45.0% | |
| GTTGAATTGGACAAAGCCCT+TGG | + | chr8.3:2280332-2280351 | MS.gene012447:CDS | 45.0% | |
| GTTGCATTGTGAATGCTGTG+AGG | + | chr8.3:2280258-2280277 | MS.gene012447:CDS | 45.0% | |
| TGACAAATTGGGTCTCTCTG+CGG | + | chr8.3:2280904-2280923 | MS.gene012447:CDS | 45.0% | |
| TGACTTCTCCTCATTCCTCA+TGG | - | chr8.3:2281737-2281756 | None:intergenic | 45.0% | |
| TGGTCATGTTATCAGACTGC+TGG | + | chr8.3:2281906-2281925 | MS.gene012447:CDS | 45.0% | |
| TGTGAGCAAAGGTAAAGTGG+TGG | + | chr8.3:2281696-2281715 | MS.gene012447:CDS | 45.0% | |
| TTGTAGCAGGATGTTGGGTT+TGG | + | chr8.3:2279770-2279789 | MS.gene012447:CDS | 45.0% | |
| TTGTGAATGCTGTGAGGGAT+GGG | + | chr8.3:2280264-2280283 | MS.gene012447:CDS | 45.0% | |
| ! | AAGTCACAAGAAGCGCGTAT+TGG | - | chr8.3:2279171-2279190 | None:intergenic | 45.0% |
| ! | AATTGATCCCTGAGGCATCA+TGG | - | chr8.3:2280762-2280781 | None:intergenic | 45.0% |
| ! | CACTTGTGATGTGGTTGGTA+AGG | - | chr8.3:2281830-2281849 | None:intergenic | 45.0% |
| ! | CAGATCCTGATTTTGGACTG+TGG | + | chr8.3:2281232-2281251 | MS.gene012447:CDS | 45.0% |
| ! | CCTCATCATTTTCCACTCCA+AGG | - | chr8.3:2280352-2280371 | None:intergenic | 45.0% |
| ! | GAGTAGCGGAAAAGATATCC+AGG | + | chr8.3:2280094-2280113 | MS.gene012447:CDS | 45.0% |
| ! | GTCTTGTTGTAGCAGGATGT+TGG | + | chr8.3:2279764-2279783 | MS.gene012447:CDS | 45.0% |
| ! | TGTTCACCTTGAGAGTATGC+TGG | + | chr8.3:2281272-2281291 | MS.gene012447:CDS | 45.0% |
| !! | AGGGAAGGTTCTGATTTTGG+GGG | + | chr8.3:2279950-2279969 | MS.gene012447:CDS | 45.0% |
| !! | CTTGTGCCGCAATTGCTTTT+CGG | - | chr8.3:2280507-2280526 | None:intergenic | 45.0% |
| !! | GTCCTCTGAAACAGCTAAGA+GGG | + | chr8.3:2279902-2279921 | MS.gene012447:CDS | 45.0% |
| !! | TGGTGCCATCATAGTCCAAA+AGG | - | chr8.3:2280742-2280761 | None:intergenic | 45.0% |
| !!! | GATTTTGGGGGTTGATGACT+TGG | + | chr8.3:2279962-2279981 | MS.gene012447:CDS | 45.0% |
| ACACCTTGACTCTTGGACAG+AGG | - | chr8.3:2279444-2279463 | None:intergenic | 50.0% | |
| ATTGGACAAAGCCCTTGGAG+TGG | + | chr8.3:2280337-2280356 | MS.gene012447:CDS | 50.0% | |
| CATTGGCCAGCATACTCTCA+AGG | - | chr8.3:2281281-2281300 | None:intergenic | 50.0% | |
| CCACATGGGTCTTCTCGAAT+CGG | + | chr8.3:2279872-2279891 | MS.gene012447:CDS | 50.0% | |
| CCACCTGCCATCAGTCAAAA+AGG | - | chr8.3:2281061-2281080 | None:intergenic | 50.0% | |
| CCCCACAGGAAGAATCTTGA+TGG | - | chr8.3:2279850-2279869 | None:intergenic | 50.0% | |
| CTACCTCTGTCCAAGAGTCA+AGG | + | chr8.3:2279438-2279457 | MS.gene012447:CDS | 50.0% | |
| GAAACGCACACCTTGACTCT+TGG | - | chr8.3:2279451-2279470 | None:intergenic | 50.0% | |
| GAAATGCAGGGTGTGAGCAA+AGG | + | chr8.3:2281685-2281704 | MS.gene012447:intron | 50.0% | |
| GCTCTCATGACGTAGCGTAT+TGG | + | chr8.3:2280546-2280565 | MS.gene012447:CDS | 50.0% | |
| GCTTGCCACAGTCCAAAATC+AGG | - | chr8.3:2281240-2281259 | None:intergenic | 50.0% | |
| GGGTGTGAGCAAAGGTAAAG+TGG | + | chr8.3:2281693-2281712 | MS.gene012447:intron | 50.0% | |
| GTAGAGTTTGCCTTAGCGAC+TGG | + | chr8.3:2280870-2280889 | MS.gene012447:CDS | 50.0% | |
| ! | CACCCTCTTAGCTGTTTCAG+AGG | - | chr8.3:2279907-2279926 | None:intergenic | 50.0% |
| !! | CCTTTTTGACTGATGGCAGG+TGG | + | chr8.3:2281058-2281077 | MS.gene012447:intron | 50.0% |
| !! | CGTCCTCTGAAACAGCTAAG+AGG | + | chr8.3:2279901-2279920 | MS.gene012447:CDS | 50.0% |
| AAACGGTCCGGTTTCGACTC+AGG | + | chr8.3:2280205-2280224 | MS.gene012447:CDS | 55.0% | |
| CTTCCTGTGGGGATCCACAT+GGG | + | chr8.3:2279858-2279877 | MS.gene012447:CDS | 55.0% | |
| GACTGATGGCAGGTGGAGTA+AGG | + | chr8.3:2281065-2281084 | MS.gene012447:intron | 55.0% | |
| GATGGCACCATGATGCCTCA+GGG | + | chr8.3:2280752-2280771 | MS.gene012447:CDS | 55.0% | |
| GATTCTCCCTGGACGACTCT+CGG | + | chr8.3:2281087-2281106 | MS.gene012447:CDS | 55.0% | |
| GCCTTCTCCTGAGTCGAAAC+CGG | - | chr8.3:2280215-2280234 | None:intergenic | 55.0% | |
| GGTGGAGTAAGGATTCTCCC+TGG | + | chr8.3:2281076-2281095 | MS.gene012447:intron | 55.0% | |
| GGTTGTTCGCCTTCACTCAG+CGG | + | chr8.3:2280407-2280426 | MS.gene012447:CDS | 55.0% | |
| GTTGTTCGCCTTCACTCAGC+GGG | + | chr8.3:2280408-2280427 | MS.gene012447:CDS | 55.0% | |
| TCCGGTTTCGACTCAGGAGA+AGG | + | chr8.3:2280211-2280230 | MS.gene012447:CDS | 55.0% | |
| TCTTCCTGTGGGGATCCACA+TGG | + | chr8.3:2279857-2279876 | MS.gene012447:CDS | 55.0% | |
| TGATGGCACCATGATGCCTC+AGG | + | chr8.3:2280751-2280770 | MS.gene012447:CDS | 55.0% | |
| TTGGGTCTCTCTGCGGAACA+TGG | + | chr8.3:2280911-2280930 | MS.gene012447:CDS | 55.0% | |
| TTGTTCGCCTTCACTCAGCG+GGG | + | chr8.3:2280409-2280428 | MS.gene012447:CDS | 55.0% | |
| ! | CCGATTCGAGAAGACCCATG+TGG | - | chr8.3:2279875-2279894 | None:intergenic | 55.0% |
| AGACCCATGTGGATCCCCAC+AGG | - | chr8.3:2279864-2279883 | None:intergenic | 60.0% | |
| GCCAATCCGAGAGTCGTCCA+GGG | - | chr8.3:2281096-2281115 | None:intergenic | 60.0% | |
| TCCCTGGACGACTCTCGGAT+TGG | + | chr8.3:2281092-2281111 | MS.gene012447:CDS | 60.0% | |
| TGCCAATCCGAGAGTCGTCC+AGG | - | chr8.3:2281097-2281116 | None:intergenic | 60.0% | |
| CTTCACTCAGCGGGGCGGTT+CGG | + | chr8.3:2280417-2280436 | MS.gene012447:CDS | 65.0% | |
| CTTCGCGGACAAGGTTCGCG+AGG | + | chr8.3:2279512-2279531 | MS.gene012447:CDS | 65.0% | |
| TTCACTCAGCGGGGCGGTTC+GGG | + | chr8.3:2280418-2280437 | MS.gene012447:CDS | 65.0% | |
| TTCGCCTTCACTCAGCGGGG+CGG | + | chr8.3:2280412-2280431 | MS.gene012447:CDS | 65.0% | |
| CGAACCGCCCCGCTGAGTGA+AGG | - | chr8.3:2280419-2280438 | None:intergenic | 70.0% | |
| ! | GGGCGGTTCGGGTGAATCCG+TGG | + | chr8.3:2280429-2280448 | MS.gene012447:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 2279066 | 2281972 | 2279066 | ID=MS.gene012447 |
| chr8.3 | mRNA | 2279066 | 2281972 | 2279066 | ID=MS.gene012447.t1;Parent=MS.gene012447 |
| chr8.3 | exon | 2279066 | 2280945 | 2279066 | ID=MS.gene012447.t1.exon1;Parent=MS.gene012447.t1 |
| chr8.3 | CDS | 2279066 | 2280945 | 2279066 | ID=cds.MS.gene012447.t1;Parent=MS.gene012447.t1 |
| chr8.3 | exon | 2281077 | 2281350 | 2281077 | ID=MS.gene012447.t1.exon2;Parent=MS.gene012447.t1 |
| chr8.3 | CDS | 2281077 | 2281350 | 2281077 | ID=cds.MS.gene012447.t1;Parent=MS.gene012447.t1 |
| chr8.3 | exon | 2281694 | 2281972 | 2281694 | ID=MS.gene012447.t1.exon3;Parent=MS.gene012447.t1 |
| chr8.3 | CDS | 2281694 | 2281972 | 2281694 | ID=cds.MS.gene012447.t1;Parent=MS.gene012447.t1 |
| Gene Sequence |
| Protein sequence |
