Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006702.t1 | XP_003607607.1 | 99.2 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.00E+00 | 1731.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006702.t1 | Q9LMI0 | 78.0 | 851 | 176 | 3 | 1 | 851 | 1 | 840 | 0.0e+00 | 1383.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006702.t1 | G7JCN5 | 99.2 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.0e+00 | 1731.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029463 | MS.gene006702 | PPI |
| MS.gene015639 | MS.gene006702 | PPI |
| MS.gene040931 | MS.gene006702 | PPI |
| MS.gene73417 | MS.gene006702 | PPI |
| MS.gene95835 | MS.gene006702 | PPI |
| MS.gene75183 | MS.gene006702 | PPI |
| MS.gene62674 | MS.gene006702 | PPI |
| MS.gene035660 | MS.gene006702 | PPI |
| MS.gene018379 | MS.gene006702 | PPI |
| MS.gene012447 | MS.gene006702 | PPI |
| MS.gene71778 | MS.gene006702 | PPI |
| MS.gene009143 | MS.gene006702 | PPI |
| MS.gene95324 | MS.gene006702 | PPI |
| MS.gene038603 | MS.gene006702 | PPI |
| MS.gene83030 | MS.gene006702 | PPI |
| MS.gene71003 | MS.gene006702 | PPI |
| MS.gene57938 | MS.gene006702 | PPI |
| MS.gene026499 | MS.gene006702 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006702.t1 | MTR_4g080160 | 99.187 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.0 | 1776 |
| MS.gene006702.t1 | MTR_1g109620 | 65.299 | 853 | 285 | 3 | 1 | 851 | 1 | 844 | 0.0 | 1210 |
| MS.gene006702.t1 | MTR_1g032730 | 64.610 | 859 | 285 | 9 | 1 | 849 | 1 | 850 | 0.0 | 1164 |
| MS.gene006702.t1 | MTR_8g105740 | 63.944 | 857 | 292 | 7 | 1 | 849 | 1 | 848 | 0.0 | 1162 |
| MS.gene006702.t1 | MTR_8g063790 | 64.277 | 823 | 286 | 2 | 32 | 852 | 25 | 841 | 0.0 | 1137 |
| MS.gene006702.t1 | MTR_4g129270 | 58.756 | 788 | 313 | 6 | 67 | 848 | 57 | 838 | 0.0 | 978 |
| MS.gene006702.t1 | MTR_4g129270 | 59.227 | 699 | 277 | 5 | 67 | 759 | 57 | 753 | 0.0 | 881 |
| MS.gene006702.t1 | MTR_3g078210 | 54.860 | 751 | 336 | 2 | 90 | 838 | 3 | 752 | 0.0 | 853 |
| MS.gene006702.t1 | MTR_3g467030 | 48.744 | 597 | 278 | 3 | 68 | 664 | 1 | 569 | 0.0 | 570 |
| MS.gene006702.t1 | MTR_2g073260 | 33.865 | 753 | 438 | 19 | 67 | 799 | 124 | 836 | 8.75e-142 | 444 |
| MS.gene006702.t1 | MTR_0034s0170 | 33.822 | 751 | 438 | 19 | 67 | 797 | 85 | 796 | 1.44e-134 | 424 |
| MS.gene006702.t1 | MTR_8g087910 | 34.746 | 354 | 200 | 8 | 43 | 387 | 53 | 384 | 7.14e-68 | 231 |
| MS.gene006702.t1 | MTR_8g087930 | 30.332 | 422 | 247 | 12 | 395 | 799 | 11 | 402 | 2.45e-52 | 192 |
| MS.gene006702.t1 | MTR_3g076810 | 51.880 | 133 | 63 | 1 | 67 | 199 | 39 | 170 | 8.17e-42 | 150 |
| MS.gene006702.t1 | MTR_3g467040 | 49.558 | 113 | 57 | 0 | 488 | 600 | 110 | 222 | 2.75e-30 | 120 |
| MS.gene006702.t1 | MTR_3g467040 | 33.793 | 145 | 91 | 2 | 315 | 456 | 1 | 143 | 1.08e-20 | 92.4 |
| MS.gene006702.t1 | MTR_3g008500 | 28.521 | 284 | 158 | 12 | 588 | 844 | 114 | 379 | 2.05e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006702.t1 | AT1G06410 | 78.026 | 851 | 176 | 3 | 1 | 851 | 1 | 840 | 0.0 | 1382 |
| MS.gene006702.t1 | AT1G06410 | 78.026 | 851 | 176 | 3 | 1 | 851 | 1 | 840 | 0.0 | 1382 |
| MS.gene006702.t1 | AT1G06410 | 78.026 | 851 | 176 | 3 | 1 | 851 | 1 | 840 | 0.0 | 1382 |
| MS.gene006702.t1 | AT4G17770 | 62.818 | 866 | 304 | 6 | 1 | 861 | 1 | 853 | 0.0 | 1171 |
| MS.gene006702.t1 | AT4G17770 | 62.818 | 866 | 304 | 6 | 1 | 861 | 1 | 853 | 0.0 | 1171 |
| MS.gene006702.t1 | AT1G68020 | 62.673 | 868 | 292 | 6 | 1 | 849 | 1 | 855 | 0.0 | 1145 |
| MS.gene006702.t1 | AT1G68020 | 62.673 | 868 | 292 | 6 | 1 | 849 | 1 | 855 | 0.0 | 1145 |
| MS.gene006702.t1 | AT1G70290 | 60.660 | 849 | 318 | 4 | 1 | 846 | 1 | 836 | 0.0 | 1098 |
| MS.gene006702.t1 | AT1G23870 | 59.696 | 856 | 330 | 3 | 1 | 851 | 1 | 846 | 0.0 | 1094 |
| MS.gene006702.t1 | AT1G60140 | 60.539 | 854 | 328 | 2 | 1 | 852 | 1 | 847 | 0.0 | 1086 |
| MS.gene006702.t1 | AT1G60140 | 60.539 | 854 | 328 | 2 | 1 | 852 | 1 | 847 | 0.0 | 1086 |
| MS.gene006702.t1 | AT1G60140 | 60.539 | 854 | 328 | 2 | 1 | 852 | 1 | 847 | 0.0 | 1086 |
| MS.gene006702.t1 | AT1G60140 | 60.539 | 854 | 328 | 2 | 1 | 852 | 1 | 847 | 0.0 | 1086 |
| MS.gene006702.t1 | AT1G60140 | 60.539 | 854 | 328 | 2 | 1 | 852 | 1 | 847 | 0.0 | 1086 |
| MS.gene006702.t1 | AT2G18700 | 58.561 | 806 | 322 | 6 | 55 | 851 | 36 | 838 | 0.0 | 1010 |
| MS.gene006702.t1 | AT1G70290 | 57.008 | 849 | 311 | 5 | 1 | 846 | 1 | 798 | 0.0 | 1008 |
| MS.gene006702.t1 | AT1G60140 | 61.367 | 761 | 285 | 2 | 1 | 759 | 1 | 754 | 0.0 | 983 |
| MS.gene006702.t1 | AT1G68020 | 62.990 | 689 | 223 | 6 | 1 | 670 | 1 | 676 | 0.0 | 919 |
| MS.gene006702.t1 | AT1G16980 | 33.499 | 806 | 475 | 23 | 67 | 851 | 13 | 778 | 8.12e-143 | 443 |
| MS.gene006702.t1 | AT1G78580 | 33.686 | 757 | 432 | 22 | 67 | 797 | 93 | 805 | 1.22e-136 | 430 |
| MS.gene006702.t1 | AT1G78580 | 33.686 | 757 | 432 | 22 | 67 | 797 | 93 | 805 | 1.22e-136 | 430 |
| MS.gene006702.t1 | AT1G78580 | 33.686 | 757 | 432 | 22 | 67 | 797 | 93 | 805 | 1.22e-136 | 430 |
| MS.gene006702.t1 | AT1G78580 | 33.686 | 757 | 432 | 22 | 67 | 797 | 93 | 805 | 1.22e-136 | 430 |
| MS.gene006702.t1 | AT4G27550 | 31.598 | 826 | 479 | 22 | 67 | 850 | 5 | 786 | 2.38e-135 | 422 |
| MS.gene006702.t1 | AT4G27550 | 32.005 | 828 | 482 | 23 | 67 | 850 | 5 | 795 | 3.45e-135 | 422 |
| MS.gene006702.t1 | AT1G16980 | 35.105 | 621 | 353 | 18 | 67 | 677 | 13 | 593 | 1.53e-118 | 375 |
Find 222 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCGGAGGATGATTATATT+TGG | 0.168883 | 4.1:+26170279 | MS.gene006702:CDS |
| TGTGGTAATTGCTCTGATTT+TGG | 0.190443 | 4.1:+26172274 | MS.gene006702:CDS |
| AGGTATAAATTTGAAGATTC+TGG | 0.215594 | 4.1:+26170733 | MS.gene006702:CDS |
| CAAAGAGGTCATATCTCTTT+TGG | 0.226862 | 4.1:+26171525 | MS.gene006702:CDS |
| TTTGCTTGGACTCTTATTAA+TGG | 0.243265 | 4.1:-26171506 | None:intergenic |
| CCCGACCCCGATCCCATTGC+TGG | 0.248765 | 4.1:-26169723 | None:intergenic |
| ATTACAAGCATGCTCTTCTT+TGG | 0.251977 | 4.1:-26171097 | None:intergenic |
| AATAAATATGCTAGAATCTT+TGG | 0.258899 | 4.1:+26173771 | MS.gene006702:CDS |
| TCTGTATATAGTTTCATTAC+AGG | 0.258995 | 4.1:-26172316 | None:intergenic |
| AGGGATGCCGACCTTGGTTT+TGG | 0.277265 | 4.1:+26172394 | MS.gene006702:CDS |
| TTTGCTTGGTATTGACGATA+TGG | 0.281634 | 4.1:+26170700 | MS.gene006702:CDS |
| TTCGCATTGGAACTTGATTC+AGG | 0.291144 | 4.1:-26171070 | None:intergenic |
| ACAGCTCTTCCTTGCCATTT+GGG | 0.295677 | 4.1:-26170782 | None:intergenic |
| TCCCAGAAGCCAAATCTAAA+AGG | 0.296805 | 4.1:-26169695 | None:intergenic |
| CCAGCAATGGGATCGGGGTC+GGG | 0.301443 | 4.1:+26169723 | MS.gene006702:CDS |
| CAGCAATGGGATCGGGGTCG+GGG | 0.303867 | 4.1:+26169724 | MS.gene006702:CDS |
| AGATAATACTTTGCTTTACT+TGG | 0.315020 | 4.1:-26173730 | None:intergenic |
| GACGAGCATAATCGAAAGTA+TGG | 0.320887 | 4.1:-26170472 | None:intergenic |
| CTCTAGCAGGGTTAACTATC+TGG | 0.321636 | 4.1:-26170811 | None:intergenic |
| TTCTTTGCTATTACAGCTTA+AGG | 0.321784 | 4.1:+26169956 | MS.gene006702:CDS |
| GCTTCTGCAAAAGGCAATTA+TGG | 0.326836 | 4.1:+26170135 | MS.gene006702:CDS |
| AACAGCTCTTCCTTGCCATT+TGG | 0.326987 | 4.1:-26170783 | None:intergenic |
| TTGTAATATCAGAATTTATT+GGG | 0.327538 | 4.1:+26171113 | MS.gene006702:CDS |
| TTTAGTATCTCCTCCCTAAC+AGG | 0.334244 | 4.1:-26170419 | None:intergenic |
| CAATATATTCATAAGGAGTT+AGG | 0.335793 | 4.1:-26171024 | None:intergenic |
| CTTGTAATATCAGAATTTAT+TGG | 0.336765 | 4.1:+26171112 | MS.gene006702:CDS |
| TTACTAAATTCTGATATCAT+TGG | 0.338425 | 4.1:+26170446 | MS.gene006702:CDS |
| TATCTAGGATTGGAATATTA+CGG | 0.338808 | 4.1:+26170551 | MS.gene006702:CDS |
| CCCGGAGGATGATTATATTT+GGG | 0.339590 | 4.1:+26170280 | MS.gene006702:CDS |
| TGACCACTCTTTGCGGCAAC+AGG | 0.344178 | 4.1:-26172472 | None:intergenic |
| TATATAGGACTCTTCCTGTT+AGG | 0.344777 | 4.1:+26170405 | MS.gene006702:CDS |
| GCACTCATGACGTGGCTTAC+TGG | 0.351395 | 4.1:+26171272 | MS.gene006702:CDS |
| ACACTCAGCAAGGCTGTAAT+AGG | 0.352058 | 4.1:-26170969 | None:intergenic |
| GTGCTTTGGTTTGGCAATAC+AGG | 0.355182 | 4.1:+26172374 | MS.gene006702:CDS |
| ACTTTCCTTTCGTTCAATAC+TGG | 0.357028 | 4.1:-26172353 | None:intergenic |
| TTACAAGCATGCTCTTCTTT+GGG | 0.358274 | 4.1:-26171096 | None:intergenic |
| GTTTGTAGACAGGGAATATC+TGG | 0.365870 | 4.1:+26171046 | MS.gene006702:CDS |
| AAGTAAAGCAAAGTATTATC+TGG | 0.370428 | 4.1:+26173732 | MS.gene006702:CDS |
| TCACCATGCATAGAAGAATC+TGG | 0.371337 | 4.1:+26173811 | MS.gene006702:CDS |
| CTCTCCATCACTCATTGAAA+TGG | 0.371727 | 4.1:-26171212 | None:intergenic |
| GGATGGATTTCCAGAAGATA+TGG | 0.376566 | 4.1:+26169977 | MS.gene006702:CDS |
| TCCTGCTGCAGTCGTATGTT+GGG | 0.381549 | 4.1:+26170503 | MS.gene006702:CDS |
| AGATCATCTAGAAAGTGTTT+TGG | 0.381754 | 4.1:+26172441 | MS.gene006702:CDS |
| GGTTCATGATTACCATTTGA+TGG | 0.383452 | 4.1:+26170301 | MS.gene006702:CDS |
| TACAGAACCTCCATATCTTC+TGG | 0.384072 | 4.1:-26169987 | None:intergenic |
| AATTTCCCAGCAATGGGATC+GGG | 0.387783 | 4.1:+26169717 | MS.gene006702:CDS |
| TTCCATCATCGGAGATATAT+AGG | 0.388493 | 4.1:+26170390 | MS.gene006702:CDS |
| ATCTAGGATTGGAATATTAC+GGG | 0.399527 | 4.1:+26170552 | MS.gene006702:CDS |
| AGTTTCCCATTCACCGTCTT+GGG | 0.399757 | 4.1:-26172251 | None:intergenic |
| ACCATCATAGTCCAACAAAA+TGG | 0.400346 | 4.1:-26171464 | None:intergenic |
| TGAATATATTGTTTGTAGAC+AGG | 0.403035 | 4.1:+26171036 | MS.gene006702:CDS |
| CTTTGCGGCAACAGGCTCAT+TGG | 0.407919 | 4.1:-26172464 | None:intergenic |
| CAATGGGATCGGGGTCGGGG+AGG | 0.407950 | 4.1:+26169727 | MS.gene006702:CDS |
| TTCCTGCTGCAGTCGTATGT+TGG | 0.414477 | 4.1:+26170502 | MS.gene006702:CDS |
| TGAACGAAAGGAAAGTGCTT+TGG | 0.417964 | 4.1:+26172360 | MS.gene006702:CDS |
| AGCAGGATCAACAGAGTGTT+TGG | 0.419750 | 4.1:+26170884 | MS.gene006702:CDS |
| CTTCTTTGGGCTATTCGCAT+TGG | 0.422173 | 4.1:-26171083 | None:intergenic |
| GAAAGGAAAGTGCTTTGGTT+TGG | 0.425700 | 4.1:+26172365 | MS.gene006702:CDS |
| ATCGTCAATACCAAGCAAAA+TGG | 0.428223 | 4.1:-26170696 | None:intergenic |
| TAAAAGTTTGCCAAAACATC+AGG | 0.429012 | 4.1:-26170107 | None:intergenic |
| TTTATGATGGCTTCTGCAAA+AGG | 0.429950 | 4.1:+26170126 | MS.gene006702:CDS |
| CTCAGAGGTGGATGATGATC+AGG | 0.430895 | 4.1:+26169803 | MS.gene006702:CDS |
| GGTGGTCCCAAGACGGTGAA+TGG | 0.434178 | 4.1:+26172245 | MS.gene006702:intron |
| AAAGCTCTCAATTGATGCTA+TGG | 0.434592 | 4.1:+26171411 | MS.gene006702:CDS |
| TCTTAGCTTTCAAAGGTAGC+TGG | 0.435142 | 4.1:-26169890 | None:intergenic |
| AAACGCCTTCTTAGAAAAGT+TGG | 0.435169 | 4.1:-26170329 | None:intergenic |
| TTCTGGGAATTTCCCAGCAA+TGG | 0.440101 | 4.1:+26169710 | MS.gene006702:CDS |
| TCTGTATTTGCTTGCACGGT+TGG | 0.440122 | 4.1:+26173700 | MS.gene006702:CDS |
| GGTGTTCTCCATCGCTTAGT+GGG | 0.441085 | 4.1:+26171134 | MS.gene006702:CDS |
| TGGGGAATAGGTCTTAGCTT+TGG | 0.442950 | 4.1:+26171355 | MS.gene006702:CDS |
| GTTAACCCTGCTAGAGGTAA+AGG | 0.443791 | 4.1:+26170818 | MS.gene006702:CDS |
| GGGTGTTCTCCATCGCTTAG+TGG | 0.443816 | 4.1:+26171133 | MS.gene006702:CDS |
| GATCTGTCAATAAACACAAT+AGG | 0.448371 | 4.1:-26170923 | None:intergenic |
| TGATGTATCACAGTATTTGC+TGG | 0.449009 | 4.1:+26170052 | MS.gene006702:CDS |
| TGTATCCCTTTACCTCTAGC+AGG | 0.449011 | 4.1:-26170824 | None:intergenic |
| TGCGGCATGAAAAGCATTAT+CGG | 0.451086 | 4.1:+26171242 | MS.gene006702:CDS |
| GTGTTATTGTCACAGCTGTA+AGG | 0.453106 | 4.1:+26170990 | MS.gene006702:CDS |
| CTTGGAATTGCTGCAGAACA+TGG | 0.454255 | 4.1:+26171640 | MS.gene006702:CDS |
| GTATTAAGATCATGCCTGTT+GGG | 0.456048 | 4.1:+26170585 | MS.gene006702:CDS |
| GAACATAGGCTTCCCACAAA+TGG | 0.459768 | 4.1:-26170214 | None:intergenic |
| CCCAGCAATGGGATCGGGGT+CGG | 0.460165 | 4.1:+26169722 | MS.gene006702:CDS |
| TCTGGGAATTTCCCAGCAAT+GGG | 0.460266 | 4.1:+26169711 | MS.gene006702:CDS |
| GATAAACTGACCACTCTTTG+CGG | 0.461574 | 4.1:-26172479 | None:intergenic |
| TCAGGCAGTAAGTGTTTCTT+CGG | 0.462017 | 4.1:+26169821 | MS.gene006702:CDS |
| CATTGTTAGTGGACGGGGTA+GGG | 0.464339 | 4.1:+26171582 | MS.gene006702:CDS |
| TGCTGAAACAACACCCCAAA+TGG | 0.466478 | 4.1:+26170768 | MS.gene006702:CDS |
| TAAAAGGTTTGTATACGATC+TGG | 0.467408 | 4.1:-26169679 | None:intergenic |
| AAATTTGAAGATTCTGGCTA+TGG | 0.469132 | 4.1:+26170739 | MS.gene006702:CDS |
| CAGTCAAAGAGGGGTTATCT+AGG | 0.470100 | 4.1:+26170536 | MS.gene006702:CDS |
| GCAGTTGCTTCAACATTCCA+TGG | 0.470653 | 4.1:-26171172 | None:intergenic |
| CACCATGCATAGAAGAATCT+GGG | 0.476735 | 4.1:+26173812 | MS.gene006702:CDS |
| AATGGGATCGGGGTCGGGGA+GGG | 0.477370 | 4.1:+26169728 | MS.gene006702:CDS |
| ACCGCTTTGATCGCCATTTG+TGG | 0.477691 | 4.1:+26170201 | MS.gene006702:CDS |
| ACCCAAATATAATCATCCTC+CGG | 0.481751 | 4.1:-26170281 | None:intergenic |
| CGATCAGAAGAAATAGTTGA+CGG | 0.482348 | 4.1:-26169849 | None:intergenic |
| TGCTTCTGTATTTGCTTGCA+CGG | 0.482357 | 4.1:+26173696 | MS.gene006702:CDS |
| AAGTTTCCCATTCACCGTCT+TGG | 0.485112 | 4.1:-26172252 | None:intergenic |
| ATATAGGACTCTTCCTGTTA+GGG | 0.485478 | 4.1:+26170406 | MS.gene006702:CDS |
| CAGCTTGTTTGCCAGAACAT+AGG | 0.487233 | 4.1:-26170228 | None:intergenic |
| CCGAGGGTTATGAGTGTCCC+GGG | 0.488412 | 4.1:+26169774 | MS.gene006702:CDS |
| AGCAAATACAGAAGCATTGG+AGG | 0.488464 | 4.1:-26173689 | None:intergenic |
| TATATCTCCGATGATGGAAA+GGG | 0.489420 | 4.1:-26170386 | None:intergenic |
| CGACCCATGTGAATCCCAAC+AGG | 0.490514 | 4.1:-26170599 | None:intergenic |
| ACCCAACATACGACTGCAGC+AGG | 0.490840 | 4.1:-26170504 | None:intergenic |
| AATGACTGAAAGTGACAAAC+AGG | 0.491293 | 4.1:+26173579 | MS.gene006702:CDS |
| CCGCTTTGATCGCCATTTGT+GGG | 0.494408 | 4.1:+26170202 | MS.gene006702:CDS |
| GTCCTATATATCTCCGATGA+TGG | 0.496938 | 4.1:-26170392 | None:intergenic |
| GCCGAGGGTTATGAGTGTCC+CGG | 0.498721 | 4.1:+26169773 | MS.gene006702:CDS |
| AACTTTCTTCTATTTCAGAA+TGG | 0.500344 | 4.1:-26170859 | None:intergenic |
| TTTGTGGGAAGCCTATGTTC+TGG | 0.500908 | 4.1:+26170217 | MS.gene006702:CDS |
| CTACAAACAATATATTCATA+AGG | 0.502334 | 4.1:-26171031 | None:intergenic |
| GATATGGAGGTTCTGTATGT+TGG | 0.504909 | 4.1:+26169993 | MS.gene006702:CDS |
| GTAGGGATAGCTTAAGTGAA+TGG | 0.505507 | 4.1:+26171599 | MS.gene006702:CDS |
| TCCACCTCTGAGACAATCCC+CGG | 0.508028 | 4.1:-26169792 | None:intergenic |
| CCCAAATATAATCATCCTCC+GGG | 0.508556 | 4.1:-26170280 | None:intergenic |
| GCATAGCCCCTTTCCATCAT+CGG | 0.508587 | 4.1:+26170379 | MS.gene006702:CDS |
| GCTGACTTTGTCCTGTGTGT+TGG | 0.508603 | 4.1:+26173601 | MS.gene006702:CDS |
| AAAGAGGGGTTATCTAGGAT+TGG | 0.508611 | 4.1:+26170541 | MS.gene006702:CDS |
| GAATTTCCCAGCAATGGGAT+CGG | 0.509309 | 4.1:+26169716 | MS.gene006702:CDS |
| TGCTTTGGTTTGGCAATACA+GGG | 0.511440 | 4.1:+26172375 | MS.gene006702:CDS |
| GATGTCGGATGAGGAGTGTA+AGG | 0.511899 | 4.1:+26170640 | MS.gene006702:CDS |
| AACAGAGTGTTTGGACGACC+TGG | 0.514305 | 4.1:+26170893 | MS.gene006702:CDS |
| GAGCTCAAACAGCAATTTGA+AGG | 0.515176 | 4.1:+26170668 | MS.gene006702:CDS |
| CAGCTCTTCCTTGCCATTTG+GGG | 0.515782 | 4.1:-26170781 | None:intergenic |
| TTAACCCTGCTAGAGGTAAA+GGG | 0.516128 | 4.1:+26170819 | MS.gene006702:CDS |
| AAGAACGAAGGCGGATGCCG+AGG | 0.520114 | 4.1:+26169757 | MS.gene006702:CDS |
| CAATACAGGGATGCCGACCT+TGG | 0.520176 | 4.1:+26172388 | MS.gene006702:CDS |
| TCATTGTTAGTGGACGGGGT+AGG | 0.521156 | 4.1:+26171581 | MS.gene006702:CDS |
| AGACATGGAGAGGGCTTGCA+CGG | 0.522594 | 4.1:+26171312 | MS.gene006702:CDS |
| ATATATCTCCGATGATGGAA+AGG | 0.524519 | 4.1:-26170387 | None:intergenic |
| AGAGATATGACCTCTTTGCT+TGG | 0.525145 | 4.1:-26171520 | None:intergenic |
| GCAAGCAAATACAGAAGCAT+TGG | 0.525460 | 4.1:-26173692 | None:intergenic |
| GTGGTCCCAAGACGGTGAAT+GGG | 0.525548 | 4.1:+26172246 | MS.gene006702:CDS |
| TTACAAGAGGGCAAAGAGTA+GGG | 0.528130 | 4.1:+26171441 | MS.gene006702:CDS |
| TATTGTGTTTATTGACAGAT+CGG | 0.528425 | 4.1:+26170925 | MS.gene006702:CDS |
| CTGTTGGGATTCACATGGGT+CGG | 0.529805 | 4.1:+26170600 | MS.gene006702:CDS |
| TTGCTATTACAGCTTAAGGA+TGG | 0.530659 | 4.1:+26169960 | MS.gene006702:CDS |
| AGAACGAAGGCGGATGCCGA+GGG | 0.530953 | 4.1:+26169758 | MS.gene006702:CDS |
| TAGCTTTGGATTTAGAGTTG+TGG | 0.534487 | 4.1:+26171369 | MS.gene006702:CDS |
| CTTACAAGAGGGCAAAGAGT+AGG | 0.537232 | 4.1:+26171440 | MS.gene006702:CDS |
| GATACATCATCTTGTTCAGC+GGG | 0.537461 | 4.1:-26170038 | None:intergenic |
| ACATCAGGAGGCAGAAAAGT+GGG | 0.540834 | 4.1:-26170092 | None:intergenic |
| GGGCTATCCGTGTCAATCCA+TGG | 0.541240 | 4.1:+26171155 | MS.gene006702:CDS |
| ACGTAGTTTCTTGCAAGACA+TGG | 0.542110 | 4.1:+26171297 | MS.gene006702:CDS |
| AAGTTGGCAGCACCATCAAA+TGG | 0.542653 | 4.1:-26170313 | None:intergenic |
| GAATATATTGTTTGTAGACA+GGG | 0.549934 | 4.1:+26171037 | MS.gene006702:CDS |
| TGTTATGAGGATGTCGGATG+AGG | 0.553523 | 4.1:+26170631 | MS.gene006702:CDS |
| AGTATTAAGATCATGCCTGT+TGG | 0.555153 | 4.1:+26170584 | MS.gene006702:CDS |
| AAATAGAAGAAAGTTGCAGC+AGG | 0.559745 | 4.1:+26170867 | MS.gene006702:CDS |
| CCGACCCCGATCCCATTGCT+GGG | 0.564119 | 4.1:-26169722 | None:intergenic |
| AAACAAGCTGTTCTTTCAGA+AGG | 0.565229 | 4.1:+26170241 | MS.gene006702:CDS |
| CCCGGGACACTCATAACCCT+CGG | 0.570549 | 4.1:-26169774 | None:intergenic |
| ATTGTCACAGCTGTAAGGGA+TGG | 0.572045 | 4.1:+26170995 | MS.gene006702:CDS |
| TCCCCAGATTCTTCTATGCA+TGG | 0.572909 | 4.1:-26173814 | None:intergenic |
| AACATCAGGAGGCAGAAAAG+TGG | 0.573267 | 4.1:-26170093 | None:intergenic |
| GAAGCCATTTCAATGAGTGA+TGG | 0.574264 | 4.1:+26171208 | MS.gene006702:CDS |
| GAGCCTGTTGCCGCAAAGAG+TGG | 0.574335 | 4.1:+26172469 | MS.gene006702:CDS |
| TTGTCACAGCTGTAAGGGAT+GGG | 0.578214 | 4.1:+26170996 | MS.gene006702:CDS |
| CCCGGGGATTGTCTCAGAGG+TGG | 0.578255 | 4.1:+26169791 | MS.gene006702:CDS |
| TCTAGAGTATCAGTCAAAGA+GGG | 0.581200 | 4.1:+26170526 | MS.gene006702:CDS |
| TATCGTTGAAGTGAAGCCCC+AGG | 0.581315 | 4.1:+26172498 | MS.gene006702:CDS |
| GCATTGCAGGATGTGAGCAA+AGG | 0.581846 | 4.1:+26173529 | MS.gene006702:intron |
| CATGCCTGTTGGGATTCACA+TGG | 0.583402 | 4.1:+26170595 | MS.gene006702:CDS |
| GTCGGATTGAATCTGTTATG+AGG | 0.584194 | 4.1:+26170618 | MS.gene006702:CDS |
| CAGTCAAGTTTGGATTCAAG+AGG | 0.585127 | 4.1:-26173839 | None:intergenic |
| TGGTTCCAGTATTGAACGAA+AGG | 0.595735 | 4.1:+26172348 | MS.gene006702:CDS |
| CTATGGTTTCAGCTTACAAG+AGG | 0.596832 | 4.1:+26171428 | MS.gene006702:CDS |
| AGAAAAGAGAGGACAACAAA+GGG | 0.596911 | 4.1:+26169910 | MS.gene006702:CDS |
| AAGAAAAGAGAGGACAACAA+AGG | 0.597247 | 4.1:+26169909 | MS.gene006702:CDS |
| GTCTAGAGTATCAGTCAAAG+AGG | 0.599688 | 4.1:+26170525 | MS.gene006702:CDS |
| AGAAGATCCAAAACCAAGGT+CGG | 0.600676 | 4.1:-26172401 | None:intergenic |
| ATTTCCCAGCAATGGGATCG+GGG | 0.601478 | 4.1:+26169718 | MS.gene006702:CDS |
| CAACATTCCATGGATTGACA+CGG | 0.605906 | 4.1:-26171162 | None:intergenic |
| CTATATACAGAGGCAACTGA+TGG | 0.609983 | 4.1:+26172328 | MS.gene006702:CDS |
| CGGATAGCCCCACTAAGCGA+TGG | 0.610821 | 4.1:-26171142 | None:intergenic |
| TAATAAGAGTCCAAGCAAAG+AGG | 0.616472 | 4.1:+26171510 | MS.gene006702:CDS |
| TGTCCCGGGGATTGTCTCAG+AGG | 0.616643 | 4.1:+26169788 | MS.gene006702:CDS |
| GTATCCCTTTACCTCTAGCA+GGG | 0.618579 | 4.1:-26170823 | None:intergenic |
| TGACAATAACACACTCAGCA+AGG | 0.622584 | 4.1:-26170979 | None:intergenic |
| GGATGAGGAGTGTAAGGCAA+GGG | 0.623073 | 4.1:+26170646 | MS.gene006702:CDS |
| CAGATAGTTAACCCTGCTAG+AGG | 0.623112 | 4.1:+26170812 | MS.gene006702:CDS |
| TAGTTAGTAGTGCAATCTCA+AGG | 0.623819 | 4.1:+26173656 | MS.gene006702:CDS |
| CAGAACATGGATACTTCTTG+AGG | 0.624436 | 4.1:+26171653 | MS.gene006702:CDS |
| AAACAACACCCCAAATGGCA+AGG | 0.628534 | 4.1:+26170773 | MS.gene006702:CDS |
| TTTCTTGCAAGACATGGAGA+GGG | 0.628667 | 4.1:+26171303 | MS.gene006702:CDS |
| GACGGTGAATGGGAAACTTG+TGG | 0.631275 | 4.1:+26172256 | MS.gene006702:CDS |
| GTGATGGAGAGAAGCAGTTG+CGG | 0.631761 | 4.1:+26171224 | MS.gene006702:CDS |
| GTGTTCTCCATCGCTTAGTG+GGG | 0.632837 | 4.1:+26171135 | MS.gene006702:CDS |
| GTATGTCAGCACTCATGACG+TGG | 0.632870 | 4.1:+26171264 | MS.gene006702:CDS |
| ATCTGTCATCACCAACACAC+AGG | 0.635325 | 4.1:-26173612 | None:intergenic |
| TGGATTTCCAGAAGATATGG+AGG | 0.636676 | 4.1:+26169980 | MS.gene006702:CDS |
| TAGGACTCTTCCTGTTAGGG+AGG | 0.637903 | 4.1:+26170409 | MS.gene006702:CDS |
| AAAGAGAGGACAACAAAGGG+TGG | 0.638553 | 4.1:+26169913 | MS.gene006702:CDS |
| CGGATGAGGAGTGTAAGGCA+AGG | 0.638820 | 4.1:+26170645 | MS.gene006702:CDS |
| TTTGAAAGCTAAGAAAAGAG+AGG | 0.639677 | 4.1:+26169899 | MS.gene006702:CDS |
| GTTTCTTGCAAGACATGGAG+AGG | 0.640852 | 4.1:+26171302 | MS.gene006702:CDS |
| AAGTTTGCCAAAACATCAGG+AGG | 0.642149 | 4.1:-26170104 | None:intergenic |
| ATGCCTGTTGGGATTCACAT+GGG | 0.644963 | 4.1:+26170596 | MS.gene006702:CDS |
| GGTAGTTGAAATAATAAACC+CGG | 0.646249 | 4.1:+26170262 | MS.gene006702:CDS |
| AACACAATAGGTTCATAACC+AGG | 0.652850 | 4.1:-26170911 | None:intergenic |
| CATCAGGAGGCAGAAAAGTG+GGG | 0.652893 | 4.1:-26170091 | None:intergenic |
| GAATGTTGAAGCAACTGCGG+AGG | 0.653258 | 4.1:+26171177 | MS.gene006702:CDS |
| TGATACATCATCTTGTTCAG+CGG | 0.658366 | 4.1:-26170039 | None:intergenic |
| ATATCTCCGATGATGGAAAG+GGG | 0.659124 | 4.1:-26170385 | None:intergenic |
| CCACCTCTGAGACAATCCCC+GGG | 0.659546 | 4.1:-26169791 | None:intergenic |
| TGTTATTGTCACAGCTGTAA+GGG | 0.659939 | 4.1:+26170991 | MS.gene006702:CDS |
| TGAATCTGTTATGAGGATGT+CGG | 0.662042 | 4.1:+26170625 | MS.gene006702:CDS |
| ACAAATGGCGATCAAAGCGG+TGG | 0.668272 | 4.1:-26170199 | None:intergenic |
| ACCATGCATAGAAGAATCTG+GGG | 0.671869 | 4.1:+26173813 | MS.gene006702:CDS |
| TATGGTTTCAGCTTACAAGA+GGG | 0.681078 | 4.1:+26171429 | MS.gene006702:CDS |
| TGTAATGAAACTATATACAG+AGG | 0.682097 | 4.1:+26172318 | MS.gene006702:CDS |
| GGAGGGAGTTTAAAGAACGA+AGG | 0.685276 | 4.1:+26169745 | MS.gene006702:CDS |
| CTAGAGTATCAGTCAAAGAG+GGG | 0.688713 | 4.1:+26170527 | MS.gene006702:CDS |
| ATGGAATGTTGAAGCAACTG+CGG | 0.690516 | 4.1:+26171174 | MS.gene006702:CDS |
| TAGGATTGGAATATTACGGG+AGG | 0.692571 | 4.1:+26170555 | MS.gene006702:CDS |
| CGAGGGTTATGAGTGTCCCG+GGG | 0.699920 | 4.1:+26169775 | MS.gene006702:CDS |
| GGGAGTTTAAAGAACGAAGG+CGG | 0.701696 | 4.1:+26169748 | MS.gene006702:CDS |
| CCCACAAATGGCGATCAAAG+CGG | 0.706904 | 4.1:-26170202 | None:intergenic |
| TGGTGATGACAGATCAGATG+AGG | 0.713489 | 4.1:+26173621 | MS.gene006702:CDS |
| TGTGAGCAAAGGCTTAGTTG+CGG | 0.713566 | 4.1:+26173540 | MS.gene006702:CDS |
| CCTGAGAAGATCCAAAACCA+AGG | 0.716480 | 4.1:-26172405 | None:intergenic |
| AGTTGAAATAATAAACCCGG+AGG | 0.724497 | 4.1:+26170265 | MS.gene006702:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGTGAAAATAATATTTT+AGG | + | chr4.1:26171747-26171766 | MS.gene006702:intron | 10.0% |
| !! | TTAAAATTGAAAACAGAAAA+TGG | - | chr4.1:26172700-26172719 | None:intergenic | 15.0% |
| !! | TTGTAATATCAGAATTTATT+GGG | + | chr4.1:26171113-26171132 | MS.gene006702:CDS | 15.0% |
| !!! | AAATTTCTGTTCTAATTTTT+TGG | + | chr4.1:26173279-26173298 | MS.gene006702:intron | 15.0% |
| !!! | AACTTTTTAAAATGAAAACA+AGG | - | chr4.1:26172737-26172756 | None:intergenic | 15.0% |
| !!! | TTGTTTTTACCATATAATTT+TGG | + | chr4.1:26173422-26173441 | MS.gene006702:intron | 15.0% |
| !! | AATAAATATGCTAGAATCTT+TGG | + | chr4.1:26173771-26173790 | MS.gene006702:CDS | 20.0% |
| !! | CTACAAACAATATATTCATA+AGG | - | chr4.1:26171034-26171053 | None:intergenic | 20.0% |
| !! | CTTGTAATATCAGAATTTAT+TGG | + | chr4.1:26171112-26171131 | MS.gene006702:CDS | 20.0% |
| !! | TAAATTGAAATTCATGTGTA+TGG | + | chr4.1:26171934-26171953 | MS.gene006702:intron | 20.0% |
| !! | TTACTAAATTCTGATATCAT+TGG | + | chr4.1:26170446-26170465 | MS.gene006702:CDS | 20.0% |
| !!! | AAATCAAATTGCTATTTAAC+AGG | - | chr4.1:26172905-26172924 | None:intergenic | 20.0% |
| !!! | AACAATGAAAACAACATTTT+TGG | - | chr4.1:26171569-26171588 | None:intergenic | 20.0% |
| !!! | ACAATGAAAACAACATTTTT+GGG | - | chr4.1:26171568-26171587 | None:intergenic | 20.0% |
| !!! | GTTCTCTTCTTTTTATAATT+TGG | + | chr4.1:26172193-26172212 | MS.gene006702:intron | 20.0% |
| !!! | TGGAACATTTTCTTATTAAA+TGG | - | chr4.1:26173192-26173211 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTTTCTACCA+TGG | + | chr4.1:26173166-26173185 | MS.gene006702:intron | 20.0% |
| ! | AAATTAGAACAGAAATTTGC+AGG | - | chr4.1:26173277-26173296 | None:intergenic | 25.0% |
| ! | AACTTTCTTCTATTTCAGAA+TGG | - | chr4.1:26170862-26170881 | None:intergenic | 25.0% |
| ! | AATATGTACAGAAATCCAAA+AGG | + | chr4.1:26172846-26172865 | MS.gene006702:intron | 25.0% |
| ! | AGATAATACTTTGCTTTACT+TGG | - | chr4.1:26173733-26173752 | None:intergenic | 25.0% |
| ! | AGCTTAGATAGCAATATTAA+GGG | + | chr4.1:26172662-26172681 | MS.gene006702:intron | 25.0% |
| ! | AGGTATAAATTTGAAGATTC+TGG | + | chr4.1:26170733-26170752 | MS.gene006702:CDS | 25.0% |
| ! | ATATCAAGAAAGAGAACATT+TGG | - | chr4.1:26172161-26172180 | None:intergenic | 25.0% |
| ! | CAATATATTCATAAGGAGTT+AGG | - | chr4.1:26171027-26171046 | None:intergenic | 25.0% |
| ! | GAATATATTGTTTGTAGACA+GGG | + | chr4.1:26171037-26171056 | MS.gene006702:CDS | 25.0% |
| ! | GTGTTAAAGCCAAAATTATA+TGG | - | chr4.1:26173434-26173453 | None:intergenic | 25.0% |
| ! | TAGAGAAATTGTATATACCT+GGG | - | chr4.1:26172518-26172537 | None:intergenic | 25.0% |
| ! | TATCAAGAAAGAGAACATTT+GGG | - | chr4.1:26172160-26172179 | None:intergenic | 25.0% |
| ! | TATTGTGTTTATTGACAGAT+CGG | + | chr4.1:26170925-26170944 | MS.gene006702:CDS | 25.0% |
| ! | TCAAAGTTAACAATAGGAAA+TGG | - | chr4.1:26172779-26172798 | None:intergenic | 25.0% |
| ! | TCTGTATATAGTTTCATTAC+AGG | - | chr4.1:26172319-26172338 | None:intergenic | 25.0% |
| ! | TGAATATATTGTTTGTAGAC+AGG | + | chr4.1:26171036-26171055 | MS.gene006702:CDS | 25.0% |
| ! | TGTAATGAAACTATATACAG+AGG | + | chr4.1:26172318-26172337 | MS.gene006702:CDS | 25.0% |
| ! | TGTTATATCTTACGTAAAGT+TGG | - | chr4.1:26173127-26173146 | None:intergenic | 25.0% |
| ! | TTATAAAAAGAAGAGAACAC+AGG | - | chr4.1:26172191-26172210 | None:intergenic | 25.0% |
| !! | AAGTAAAGCAAAGTATTATC+TGG | + | chr4.1:26173732-26173751 | MS.gene006702:CDS | 25.0% |
| !! | ATTTTCTTATTAAATGGCCA+TGG | - | chr4.1:26173186-26173205 | None:intergenic | 25.0% |
| !! | CAATGAAAACAACATTTTTG+GGG | - | chr4.1:26171567-26171586 | None:intergenic | 25.0% |
| !! | CTGTTTTCAAAGTTAACAAT+AGG | - | chr4.1:26172785-26172804 | None:intergenic | 25.0% |
| !! | GTATACAAACCTTTTAGATT+TGG | + | chr4.1:26169686-26169705 | MS.gene006702:CDS | 25.0% |
| !! | TAACAATTTGAGCATTTTTC+AGG | + | chr4.1:26172224-26172243 | MS.gene006702:intron | 25.0% |
| !! | TATCTAGGATTGGAATATTA+CGG | + | chr4.1:26170551-26170570 | MS.gene006702:CDS | 25.0% |
| !!! | AAAGTGTTTTAAAGTCCAAT+TGG | + | chr4.1:26171893-26171912 | MS.gene006702:intron | 25.0% |
| !!! | AATGTTGTTTTCATTGTTAG+TGG | + | chr4.1:26171571-26171590 | MS.gene006702:CDS | 25.0% |
| !!! | AGTTTTTTAGAGAAGCTTTT+TGG | + | chr4.1:26173352-26173371 | MS.gene006702:intron | 25.0% |
| !!! | ATTGAGAGCTTTTTAAAGTT+AGG | - | chr4.1:26171403-26171422 | None:intergenic | 25.0% |
| !!! | TAGCTTTAGATAACATTGTT+AGG | - | chr4.1:26173074-26173093 | None:intergenic | 25.0% |
| !!! | TTGAGAGCTTTTTAAAGTTA+GGG | - | chr4.1:26171402-26171421 | None:intergenic | 25.0% |
| ACAGCATCATTTATGTCTAA+AGG | - | chr4.1:26173326-26173345 | None:intergenic | 30.0% | |
| ACCTTCTTAGAAAAAGATGT+TGG | + | chr4.1:26171335-26171354 | MS.gene006702:CDS | 30.0% | |
| AGACAAGGATAAAATAGATC+AGG | - | chr4.1:26173234-26173253 | None:intergenic | 30.0% | |
| AGAGAAATTGTATATACCTG+GGG | - | chr4.1:26172517-26172536 | None:intergenic | 30.0% | |
| CAAACAATATATCACTCAAC+AGG | - | chr4.1:26172055-26172074 | None:intergenic | 30.0% | |
| CCTTCTTAGAAAAAGATGTT+GGG | + | chr4.1:26171336-26171355 | MS.gene006702:CDS | 30.0% | |
| CTTCTTAGAAAAAGATGTTG+GGG | + | chr4.1:26171337-26171356 | MS.gene006702:CDS | 30.0% | |
| GAGCTTAGATAGCAATATTA+AGG | + | chr4.1:26172661-26172680 | MS.gene006702:intron | 30.0% | |
| GATAAAATAGATCAGGTTCT+TGG | - | chr4.1:26173227-26173246 | None:intergenic | 30.0% | |
| GATCTGTCAATAAACACAAT+AGG | - | chr4.1:26170926-26170945 | None:intergenic | 30.0% | |
| GGTAGTTGAAATAATAAACC+CGG | + | chr4.1:26170262-26170281 | MS.gene006702:CDS | 30.0% | |
| GTAGAGAAATTGTATATACC+TGG | - | chr4.1:26172519-26172538 | None:intergenic | 30.0% | |
| TAAAAGGTTTGTATACGATC+TGG | - | chr4.1:26169682-26169701 | None:intergenic | 30.0% | |
| TAAAAGTTTGCCAAAACATC+AGG | - | chr4.1:26170110-26170129 | None:intergenic | 30.0% | |
| TAAAGCATACACTATCCAAT+TGG | - | chr4.1:26171911-26171930 | None:intergenic | 30.0% | |
| TACAGTACAAGTTCATAGTA+TGG | - | chr4.1:26171778-26171797 | None:intergenic | 30.0% | |
| TTTACTCCCTGTAAAAAACT+TGG | + | chr4.1:26171622-26171641 | MS.gene006702:CDS | 30.0% | |
| TTTATGTCTAAAGGAACAAC+AGG | - | chr4.1:26173317-26173336 | None:intergenic | 30.0% | |
| TTTGAAAGCTAAGAAAAGAG+AGG | + | chr4.1:26169899-26169918 | MS.gene006702:CDS | 30.0% | |
| TTTGCTTGGACTCTTATTAA+TGG | - | chr4.1:26171509-26171528 | None:intergenic | 30.0% | |
| ! | AAATTTGAAGATTCTGGCTA+TGG | + | chr4.1:26170739-26170758 | MS.gene006702:CDS | 30.0% |
| ! | ATCTAGGATTGGAATATTAC+GGG | + | chr4.1:26170552-26170571 | MS.gene006702:CDS | 30.0% |
| ! | ATGAATCATCATTTTCCCAA+AGG | - | chr4.1:26173497-26173516 | None:intergenic | 30.0% |
| ! | CAATGTTATCTAAAGCTAGT+AGG | + | chr4.1:26173076-26173095 | MS.gene006702:intron | 30.0% |
| ! | CTCTTATTAATGGAGTTTTG+TGG | - | chr4.1:26171499-26171518 | None:intergenic | 30.0% |
| ! | GACGATATGGACATTTTTAA+AGG | + | chr4.1:26170713-26170732 | MS.gene006702:CDS | 30.0% |
| ! | GATCTATTTTATCCTTGTCT+TGG | + | chr4.1:26173234-26173253 | MS.gene006702:intron | 30.0% |
| ! | GGTAACTTGTAATGAAAAAG+TGG | - | chr4.1:26170161-26170180 | None:intergenic | 30.0% |
| ! | TGAATCATCATTTTCCCAAA+GGG | - | chr4.1:26173496-26173515 | None:intergenic | 30.0% |
| ! | TGGCTTTTATCAGTTGAAAA+CGG | - | chr4.1:26170182-26170201 | None:intergenic | 30.0% |
| ! | TTGTTTTCATTGTTAGTGGA+CGG | + | chr4.1:26171575-26171594 | MS.gene006702:CDS | 30.0% |
| !! | CGAAGTCATTTTATAGGAAA+TGG | - | chr4.1:26172992-26173011 | None:intergenic | 30.0% |
| !! | CGTTTTAACAGGGTTAAAAT+GGG | + | chr4.1:26170347-26170366 | MS.gene006702:CDS | 30.0% |
| !! | GGTTTTCGAAGTCATTTTAT+AGG | - | chr4.1:26172998-26173017 | None:intergenic | 30.0% |
| !! | GTTTTGGCAAACTTTTATGA+TGG | + | chr4.1:26170113-26170132 | MS.gene006702:CDS | 30.0% |
| !! | TCTCTTTTCTTAGCTTTCAA+AGG | - | chr4.1:26169900-26169919 | None:intergenic | 30.0% |
| !! | TTCTTTGCTATTACAGCTTA+AGG | + | chr4.1:26169956-26169975 | MS.gene006702:CDS | 30.0% |
| !!! | AGATCATCTAGAAAGTGTTT+TGG | + | chr4.1:26172441-26172460 | MS.gene006702:CDS | 30.0% |
| !!! | AGCAATTCCAAGTTTTTTAC+AGG | - | chr4.1:26171632-26171651 | None:intergenic | 30.0% |
| !!! | GCAATTCCAAGTTTTTTACA+GGG | - | chr4.1:26171631-26171650 | None:intergenic | 30.0% |
| !!! | TAGGCAACTTTTTCAGTAAT+TGG | - | chr4.1:26170953-26170972 | None:intergenic | 30.0% |
| AAACAAGCTGTTCTTTCAGA+AGG | + | chr4.1:26170241-26170260 | MS.gene006702:CDS | 35.0% | |
| AAACGCCTTCTTAGAAAAGT+TGG | - | chr4.1:26170332-26170351 | None:intergenic | 35.0% | |
| AAAGCTCTCAATTGATGCTA+TGG | + | chr4.1:26171411-26171430 | MS.gene006702:CDS | 35.0% | |
| AAATAGAAGAAAGTTGCAGC+AGG | + | chr4.1:26170867-26170886 | MS.gene006702:CDS | 35.0% | |
| AACACAATAGGTTCATAACC+AGG | - | chr4.1:26170914-26170933 | None:intergenic | 35.0% | |
| AAGAAAAGAGAGGACAACAA+AGG | + | chr4.1:26169909-26169928 | MS.gene006702:CDS | 35.0% | |
| AAGCCTGTGATAACAGAAAA+TGG | + | chr4.1:26172815-26172834 | MS.gene006702:intron | 35.0% | |
| AATAACTTCCTTTCATCCCT+AGG | + | chr4.1:26171842-26171861 | MS.gene006702:intron | 35.0% | |
| AATGACTGAAAGTGACAAAC+AGG | + | chr4.1:26173579-26173598 | MS.gene006702:CDS | 35.0% | |
| AATGTCAGATATCCAAGACA+AGG | - | chr4.1:26173249-26173268 | None:intergenic | 35.0% | |
| ACCATCATAGTCCAACAAAA+TGG | - | chr4.1:26171467-26171486 | None:intergenic | 35.0% | |
| ACCCAAATATAATCATCCTC+CGG | - | chr4.1:26170284-26170303 | None:intergenic | 35.0% | |
| ACTTTCCTTTCGTTCAATAC+TGG | - | chr4.1:26172356-26172375 | None:intergenic | 35.0% | |
| AGAAAAAGATGTTGGGGAAT+AGG | + | chr4.1:26171343-26171362 | MS.gene006702:CDS | 35.0% | |
| AGAAAAGAGAGGACAACAAA+GGG | + | chr4.1:26169910-26169929 | MS.gene006702:CDS | 35.0% | |
| AGCCTGTGATAACAGAAAAT+GGG | + | chr4.1:26172816-26172835 | MS.gene006702:intron | 35.0% | |
| AGTATTAAGATCATGCCTGT+TGG | + | chr4.1:26170584-26170603 | MS.gene006702:CDS | 35.0% | |
| AGTTGAAATAATAAACCCGG+AGG | + | chr4.1:26170265-26170284 | MS.gene006702:CDS | 35.0% | |
| ATATAGGACTCTTCCTGTTA+GGG | + | chr4.1:26170406-26170425 | MS.gene006702:CDS | 35.0% | |
| ATCGTCAATACCAAGCAAAA+TGG | - | chr4.1:26170699-26170718 | None:intergenic | 35.0% | |
| ATTACAAGCATGCTCTTCTT+TGG | - | chr4.1:26171100-26171119 | None:intergenic | 35.0% | |
| CGATCAGAAGAAATAGTTGA+CGG | - | chr4.1:26169852-26169871 | None:intergenic | 35.0% | |
| CTGCATTCAGACAAGAAAAA+TGG | - | chr4.1:26171814-26171833 | None:intergenic | 35.0% | |
| GAAAATGTTCCATCTAACCA+TGG | + | chr4.1:26173200-26173219 | MS.gene006702:intron | 35.0% | |
| GGTTCATGATTACCATTTGA+TGG | + | chr4.1:26170301-26170320 | MS.gene006702:CDS | 35.0% | |
| GTAAAAACAAACTGCTATGC+TGG | - | chr4.1:26173412-26173431 | None:intergenic | 35.0% | |
| GTATTAAGATCATGCCTGTT+GGG | + | chr4.1:26170585-26170604 | MS.gene006702:CDS | 35.0% | |
| TAATAAGAGTCCAAGCAAAG+AGG | + | chr4.1:26171510-26171529 | MS.gene006702:CDS | 35.0% | |
| TATATAGGACTCTTCCTGTT+AGG | + | chr4.1:26170405-26170424 | MS.gene006702:CDS | 35.0% | |
| TATGGTTTCAGCTTACAAGA+GGG | + | chr4.1:26171429-26171448 | MS.gene006702:CDS | 35.0% | |
| TCTTATACCATTTGCATTGC+AGG | + | chr4.1:26173516-26173535 | MS.gene006702:intron | 35.0% | |
| TGAATCTGTTATGAGGATGT+CGG | + | chr4.1:26170625-26170644 | MS.gene006702:CDS | 35.0% | |
| TGAGAACATCAGTTGTCTTA+TGG | + | chr4.1:26172008-26172027 | MS.gene006702:intron | 35.0% | |
| TGATACATCATCTTGTTCAG+CGG | - | chr4.1:26170042-26170061 | None:intergenic | 35.0% | |
| TGATGTATCACAGTATTTGC+TGG | + | chr4.1:26170052-26170071 | MS.gene006702:CDS | 35.0% | |
| TGTTATTGTCACAGCTGTAA+GGG | + | chr4.1:26170991-26171010 | MS.gene006702:CDS | 35.0% | |
| TTACAAGCATGCTCTTCTTT+GGG | - | chr4.1:26171099-26171118 | None:intergenic | 35.0% | |
| TTCCATCATCGGAGATATAT+AGG | + | chr4.1:26170390-26170409 | MS.gene006702:CDS | 35.0% | |
| TTTATGATGGCTTCTGCAAA+AGG | + | chr4.1:26170126-26170145 | MS.gene006702:CDS | 35.0% | |
| ! | AACTTGCTTTCACCATGTTT+CGG | - | chr4.1:26173020-26173039 | None:intergenic | 35.0% |
| ! | AGCAATATTAAGGGCATGAT+TGG | + | chr4.1:26172671-26172690 | MS.gene006702:intron | 35.0% |
| ! | CAAAGAGGTCATATCTCTTT+TGG | + | chr4.1:26171525-26171544 | MS.gene006702:CDS | 35.0% |
| ! | GAAGGAAAAACCATTTTGCT+TGG | + | chr4.1:26170686-26170705 | MS.gene006702:CDS | 35.0% |
| ! | GAATCATCATTTTCCCAAAG+GGG | - | chr4.1:26173495-26173514 | None:intergenic | 35.0% |
| ! | GTAATTGCTCTGATTTTGGA+TGG | + | chr4.1:26172278-26172297 | MS.gene006702:CDS | 35.0% |
| ! | TCTAGAGTATCAGTCAAAGA+GGG | + | chr4.1:26170526-26170545 | MS.gene006702:CDS | 35.0% |
| ! | TGTGGTAATTGCTCTGATTT+TGG | + | chr4.1:26172274-26172293 | MS.gene006702:CDS | 35.0% |
| ! | TTCCCATTTTCTGTTATCAC+AGG | - | chr4.1:26172821-26172840 | None:intergenic | 35.0% |
| ! | TTGCTATTACAGCTTAAGGA+TGG | + | chr4.1:26169960-26169979 | MS.gene006702:CDS | 35.0% |
| !! | AACCTTTTAGATTTGGCTTC+TGG | + | chr4.1:26169693-26169712 | MS.gene006702:CDS | 35.0% |
| !! | ACCTTTTAGATTTGGCTTCT+GGG | + | chr4.1:26169694-26169713 | MS.gene006702:CDS | 35.0% |
| !! | ATATATCTCCGATGATGGAA+AGG | - | chr4.1:26170390-26170409 | None:intergenic | 35.0% |
| !! | CCCAACATCTTTTTCTAAGA+AGG | - | chr4.1:26171339-26171358 | None:intergenic | 35.0% |
| !! | CTAAAATGCATTCTGGAGTT+TGG | + | chr4.1:26172611-26172630 | MS.gene006702:intron | 35.0% |
| !! | CTCCAGAATGCATTTTAGAA+AGG | - | chr4.1:26172609-26172628 | None:intergenic | 35.0% |
| !! | GCGTTTTAACAGGGTTAAAA+TGG | + | chr4.1:26170346-26170365 | MS.gene006702:CDS | 35.0% |
| !! | GTCCTTTCTAAAATGCATTC+TGG | + | chr4.1:26172604-26172623 | MS.gene006702:intron | 35.0% |
| !! | TAGCTTTGGATTTAGAGTTG+TGG | + | chr4.1:26171369-26171388 | MS.gene006702:CDS | 35.0% |
| !! | TATATCTCCGATGATGGAAA+GGG | - | chr4.1:26170389-26170408 | None:intergenic | 35.0% |
| !! | TGTTTTCATTGTTAGTGGAC+GGG | + | chr4.1:26171576-26171595 | MS.gene006702:CDS | 35.0% |
| !! | TTTGCTTGGTATTGACGATA+TGG | + | chr4.1:26170700-26170719 | MS.gene006702:CDS | 35.0% |
| !!! | CAATTTGAGCATTTTTCAGG+TGG | + | chr4.1:26172227-26172246 | MS.gene006702:intron | 35.0% |
| !!! | TCTAAGAAGGCGTTTTAACA+GGG | + | chr4.1:26170337-26170356 | MS.gene006702:CDS | 35.0% |
| !!! | TTCTAAGAAGGCGTTTTAAC+AGG | + | chr4.1:26170336-26170355 | MS.gene006702:CDS | 35.0% |
| AAGTTTGCCAAAACATCAGG+AGG | - | chr4.1:26170107-26170126 | None:intergenic | 40.0% | |
| AATAGCTCTTGTTCAGACCT+AGG | - | chr4.1:26171862-26171881 | None:intergenic | 40.0% | |
| ACAACTGATGTTCTCAACTC+TGG | - | chr4.1:26172004-26172023 | None:intergenic | 40.0% | |
| ACCATGCATAGAAGAATCTG+GGG | + | chr4.1:26173813-26173832 | MS.gene006702:CDS | 40.0% | |
| ACCCGGAGGATGATTATATT+TGG | + | chr4.1:26170279-26170298 | MS.gene006702:CDS | 40.0% | |
| ACGTAGTTTCTTGCAAGACA+TGG | + | chr4.1:26171297-26171316 | MS.gene006702:CDS | 40.0% | |
| ACTTGCTTTCACCATGTTTC+GGG | - | chr4.1:26173019-26173038 | None:intergenic | 40.0% | |
| AGAAATCCAAAAGGTCCCTA+GGG | + | chr4.1:26172855-26172874 | MS.gene006702:intron | 40.0% | |
| AGAAGATCCAAAACCAAGGT+CGG | - | chr4.1:26172404-26172423 | None:intergenic | 40.0% | |
| AGAGATATGACCTCTTTGCT+TGG | - | chr4.1:26171523-26171542 | None:intergenic | 40.0% | |
| ATAGCTCTTGTTCAGACCTA+GGG | - | chr4.1:26171861-26171880 | None:intergenic | 40.0% | |
| ATGGAATGTTGAAGCAACTG+CGG | + | chr4.1:26171174-26171193 | MS.gene006702:CDS | 40.0% | |
| ATGTCTAAAGGAACAACAGG+AGG | - | chr4.1:26173314-26173333 | None:intergenic | 40.0% | |
| CAACAAATTCCCGACAACTA+AGG | - | chr4.1:26173103-26173122 | None:intergenic | 40.0% | |
| CACCATGCATAGAAGAATCT+GGG | + | chr4.1:26173812-26173831 | MS.gene006702:CDS | 40.0% | |
| CAGAACATGGATACTTCTTG+AGG | + | chr4.1:26171653-26171672 | MS.gene006702:CDS | 40.0% | |
| CCCAAATATAATCATCCTCC+GGG | - | chr4.1:26170283-26170302 | None:intergenic | 40.0% | |
| CCCGGAGGATGATTATATTT+GGG | + | chr4.1:26170280-26170299 | MS.gene006702:CDS | 40.0% | |
| CTATATACAGAGGCAACTGA+TGG | + | chr4.1:26172328-26172347 | MS.gene006702:CDS | 40.0% | |
| CTATGGTTTCAGCTTACAAG+AGG | + | chr4.1:26171428-26171447 | MS.gene006702:CDS | 40.0% | |
| CTCTCCATCACTCATTGAAA+TGG | - | chr4.1:26171215-26171234 | None:intergenic | 40.0% | |
| CTGAACAAGAGCTATTACGT+GGG | + | chr4.1:26171866-26171885 | MS.gene006702:intron | 40.0% | |
| GAAACATGGTGAAAGCAAGT+TGG | + | chr4.1:26173019-26173038 | MS.gene006702:intron | 40.0% | |
| GAAGCCATTTCAATGAGTGA+TGG | + | chr4.1:26171208-26171227 | MS.gene006702:CDS | 40.0% | |
| GACGAGCATAATCGAAAGTA+TGG | - | chr4.1:26170475-26170494 | None:intergenic | 40.0% | |
| GAGCTCAAACAGCAATTTGA+AGG | + | chr4.1:26170668-26170687 | MS.gene006702:CDS | 40.0% | |
| GATAAACTGACCACTCTTTG+CGG | - | chr4.1:26172482-26172501 | None:intergenic | 40.0% | |
| GATACATCATCTTGTTCAGC+GGG | - | chr4.1:26170041-26170060 | None:intergenic | 40.0% | |
| GATATGGAGGTTCTGTATGT+TGG | + | chr4.1:26169993-26170012 | MS.gene006702:CDS | 40.0% | |
| GATCAATGCAGATCCATACA+TGG | - | chr4.1:26172103-26172122 | None:intergenic | 40.0% | |
| GCTTCTGCAAAAGGCAATTA+TGG | + | chr4.1:26170135-26170154 | MS.gene006702:CDS | 40.0% | |
| GTAGGGATAGCTTAAGTGAA+TGG | + | chr4.1:26171599-26171618 | MS.gene006702:CDS | 40.0% | |
| GTCCTATATATCTCCGATGA+TGG | - | chr4.1:26170395-26170414 | None:intergenic | 40.0% | |
| GTCGGATTGAATCTGTTATG+AGG | + | chr4.1:26170618-26170637 | MS.gene006702:CDS | 40.0% | |
| GTTTGTAGACAGGGAATATC+TGG | + | chr4.1:26171046-26171065 | MS.gene006702:CDS | 40.0% | |
| TACAGAACCTCCATATCTTC+TGG | - | chr4.1:26169990-26170009 | None:intergenic | 40.0% | |
| TAGGATTGGAATATTACGGG+AGG | + | chr4.1:26170555-26170574 | MS.gene006702:CDS | 40.0% | |
| TATTGTGCTACAACCCCTTT+GGG | + | chr4.1:26173479-26173498 | MS.gene006702:intron | 40.0% | |
| TCACCATGCATAGAAGAATC+TGG | + | chr4.1:26173811-26173830 | MS.gene006702:CDS | 40.0% | |
| TCAGGCAGTAAGTGTTTCTT+CGG | + | chr4.1:26169821-26169840 | MS.gene006702:CDS | 40.0% | |
| TCCCAGAAGCCAAATCTAAA+AGG | - | chr4.1:26169698-26169717 | None:intergenic | 40.0% | |
| TCTGAACAAGAGCTATTACG+TGG | + | chr4.1:26171865-26171884 | MS.gene006702:intron | 40.0% | |
| TGAACAAGAGCTATTACGTG+GGG | + | chr4.1:26171867-26171886 | MS.gene006702:intron | 40.0% | |
| TGACAATAACACACTCAGCA+AGG | - | chr4.1:26170982-26171001 | None:intergenic | 40.0% | |
| TGCTTCTGTATTTGCTTGCA+CGG | + | chr4.1:26173696-26173715 | MS.gene006702:CDS | 40.0% | |
| TGGATTTCCAGAAGATATGG+AGG | + | chr4.1:26169980-26169999 | MS.gene006702:CDS | 40.0% | |
| TTAACCCTGCTAGAGGTAAA+GGG | + | chr4.1:26170819-26170838 | MS.gene006702:CDS | 40.0% | |
| TTACAAGAGGGCAAAGAGTA+GGG | + | chr4.1:26171441-26171460 | MS.gene006702:CDS | 40.0% | |
| TTATTGTGCTACAACCCCTT+TGG | + | chr4.1:26173478-26173497 | MS.gene006702:intron | 40.0% | |
| TTCGCATTGGAACTTGATTC+AGG | - | chr4.1:26171073-26171092 | None:intergenic | 40.0% | |
| TTGATCACTTCCTCCATGTA+TGG | + | chr4.1:26172087-26172106 | MS.gene006702:intron | 40.0% | |
| TTTAGTATCTCCTCCCTAAC+AGG | - | chr4.1:26170422-26170441 | None:intergenic | 40.0% | |
| TTTCTTGCAAGACATGGAGA+GGG | + | chr4.1:26171303-26171322 | MS.gene006702:CDS | 40.0% | |
| ! | AAAGAGGGGTTATCTAGGAT+TGG | + | chr4.1:26170541-26170560 | MS.gene006702:CDS | 40.0% |
| ! | CAACATTCCATGGATTGACA+CGG | - | chr4.1:26171165-26171184 | None:intergenic | 40.0% |
| ! | CTAGAGTATCAGTCAAAGAG+GGG | + | chr4.1:26170527-26170546 | MS.gene006702:CDS | 40.0% |
| ! | GCAAGCAAATACAGAAGCAT+TGG | - | chr4.1:26173695-26173714 | None:intergenic | 40.0% |
| ! | GGATGGATTTCCAGAAGATA+TGG | + | chr4.1:26169977-26169996 | MS.gene006702:CDS | 40.0% |
| ! | GTCTAGAGTATCAGTCAAAG+AGG | + | chr4.1:26170525-26170544 | MS.gene006702:CDS | 40.0% |
| ! | GTGTTATTGTCACAGCTGTA+AGG | + | chr4.1:26170990-26171009 | MS.gene006702:CDS | 40.0% |
| ! | TCTTAGCTTTCAAAGGTAGC+TGG | - | chr4.1:26169893-26169912 | None:intergenic | 40.0% |
| ! | TGGTTCCAGTATTGAACGAA+AGG | + | chr4.1:26172348-26172367 | MS.gene006702:CDS | 40.0% |
| ! | TTTTCTGCCTCCTGATGTTT+TGG | + | chr4.1:26170097-26170116 | MS.gene006702:CDS | 40.0% |
| ! | TTTTGGATCTTCTCAGGCTA+AGG | + | chr4.1:26172411-26172430 | MS.gene006702:CDS | 40.0% |
| !! | AAAGAGTAGGGCCATTTTGT+TGG | + | chr4.1:26171453-26171472 | MS.gene006702:CDS | 40.0% |
| !! | ACAAAGGGTGGAGTTTTAGT+TGG | + | chr4.1:26169925-26169944 | MS.gene006702:CDS | 40.0% |
| !! | AGCAAATACAGAAGCATTGG+AGG | - | chr4.1:26173692-26173711 | None:intergenic | 40.0% |
| !! | ATATCTCCGATGATGGAAAG+GGG | - | chr4.1:26170388-26170407 | None:intergenic | 40.0% |
| !! | GAAAGGAAAGTGCTTTGGTT+TGG | + | chr4.1:26172365-26172384 | MS.gene006702:CDS | 40.0% |
| !! | GCCATTTTGTTGGACTATGA+TGG | + | chr4.1:26171463-26171482 | MS.gene006702:CDS | 40.0% |
| !! | GTTTTCATTGTTAGTGGACG+GGG | + | chr4.1:26171577-26171596 | MS.gene006702:CDS | 40.0% |
| !! | TGAACGAAAGGAAAGTGCTT+TGG | + | chr4.1:26172360-26172379 | MS.gene006702:CDS | 40.0% |
| !! | TGCGGCATGAAAAGCATTAT+CGG | + | chr4.1:26171242-26171261 | MS.gene006702:CDS | 40.0% |
| !! | TGCTGCCAACTTTTCTAAGA+AGG | + | chr4.1:26170324-26170343 | MS.gene006702:CDS | 40.0% |
| !! | TGCTTTGGTTTGGCAATACA+GGG | + | chr4.1:26172375-26172394 | MS.gene006702:CDS | 40.0% |
| !!! | GTGGAGTTTTAGTTGGAATG+AGG | + | chr4.1:26169932-26169951 | MS.gene006702:CDS | 40.0% |
| AAACAACACCCCAAATGGCA+AGG | + | chr4.1:26170773-26170792 | MS.gene006702:CDS | 45.0% | |
| AAAGAGAGGACAACAAAGGG+TGG | + | chr4.1:26169913-26169932 | MS.gene006702:CDS | 45.0% | |
| AACAGCTCTTCCTTGCCATT+TGG | - | chr4.1:26170786-26170805 | None:intergenic | 45.0% | |
| AACATCAGGAGGCAGAAAAG+TGG | - | chr4.1:26170096-26170115 | None:intergenic | 45.0% | |
| AAGTTGGCAGCACCATCAAA+TGG | - | chr4.1:26170316-26170335 | None:intergenic | 45.0% | |
| AAGTTTCCCATTCACCGTCT+TGG | - | chr4.1:26172255-26172274 | None:intergenic | 45.0% | |
| AATTTCCCAGCAATGGGATC+GGG | + | chr4.1:26169717-26169736 | MS.gene006702:CDS | 45.0% | |
| ACACTCAGCAAGGCTGTAAT+AGG | - | chr4.1:26170972-26170991 | None:intergenic | 45.0% | |
| ACATCAGGAGGCAGAAAAGT+GGG | - | chr4.1:26170095-26170114 | None:intergenic | 45.0% | |
| AGTTTCCCATTCACCGTCTT+GGG | - | chr4.1:26172254-26172273 | None:intergenic | 45.0% | |
| ATCTGTCATCACCAACACAC+AGG | - | chr4.1:26173615-26173634 | None:intergenic | 45.0% | |
| ATGCCTGTTGGGATTCACAT+GGG | + | chr4.1:26170596-26170615 | MS.gene006702:CDS | 45.0% | |
| ATTGTCACAGCTGTAAGGGA+TGG | + | chr4.1:26170995-26171014 | MS.gene006702:CDS | 45.0% | |
| CAATGCAGATCCATACATGG+AGG | - | chr4.1:26172100-26172119 | None:intergenic | 45.0% | |
| CAGAAATCCAAAAGGTCCCT+AGG | + | chr4.1:26172854-26172873 | MS.gene006702:intron | 45.0% | |
| CAGATAGTTAACCCTGCTAG+AGG | + | chr4.1:26170812-26170831 | MS.gene006702:CDS | 45.0% | |
| CAGTCAAAGAGGGGTTATCT+AGG | + | chr4.1:26170536-26170555 | MS.gene006702:CDS | 45.0% | |
| CCTGAGAAGATCCAAAACCA+AGG | - | chr4.1:26172408-26172427 | None:intergenic | 45.0% | |
| CTAGTAGGTCCTTAGTTGTC+GGG | + | chr4.1:26173091-26173110 | MS.gene006702:intron | 45.0% | |
| CTCACATCCTGCAATGCAAA+TGG | - | chr4.1:26173526-26173545 | None:intergenic | 45.0% | |
| CTCTAGCAGGGTTAACTATC+TGG | - | chr4.1:26170814-26170833 | None:intergenic | 45.0% | |
| CTGAAACCAATCAGACCCTA+GGG | - | chr4.1:26172873-26172892 | None:intergenic | 45.0% | |
| CTTACAAGAGGGCAAAGAGT+AGG | + | chr4.1:26171440-26171459 | MS.gene006702:CDS | 45.0% | |
| CTTCTTTGGGCTATTCGCAT+TGG | - | chr4.1:26171086-26171105 | None:intergenic | 45.0% | |
| CTTGGAATTGCTGCAGAACA+TGG | + | chr4.1:26171640-26171659 | MS.gene006702:CDS | 45.0% | |
| GAACATAGGCTTCCCACAAA+TGG | - | chr4.1:26170217-26170236 | None:intergenic | 45.0% | |
| GAATTTCCCAGCAATGGGAT+CGG | + | chr4.1:26169716-26169735 | MS.gene006702:CDS | 45.0% | |
| GACTTCGAAAACCCGAAACA+TGG | + | chr4.1:26173005-26173024 | MS.gene006702:intron | 45.0% | |
| GCAGTTGCTTCAACATTCCA+TGG | - | chr4.1:26171175-26171194 | None:intergenic | 45.0% | |
| GCTAGTAGGTCCTTAGTTGT+CGG | + | chr4.1:26173090-26173109 | MS.gene006702:intron | 45.0% | |
| GGAGGGAGTTTAAAGAACGA+AGG | + | chr4.1:26169745-26169764 | MS.gene006702:CDS | 45.0% | |
| GGGAGTTTAAAGAACGAAGG+CGG | + | chr4.1:26169748-26169767 | MS.gene006702:CDS | 45.0% | |
| GTATCCCTTTACCTCTAGCA+GGG | - | chr4.1:26170826-26170845 | None:intergenic | 45.0% | |
| GTTAACCCTGCTAGAGGTAA+AGG | + | chr4.1:26170818-26170837 | MS.gene006702:CDS | 45.0% | |
| GTTCTTGGTCCATGGTTAGA+TGG | - | chr4.1:26173212-26173231 | None:intergenic | 45.0% | |
| GTTTCTTGCAAGACATGGAG+AGG | + | chr4.1:26171302-26171321 | MS.gene006702:CDS | 45.0% | |
| TAGATCAGGTTCTTGGTCCA+TGG | - | chr4.1:26173220-26173239 | None:intergenic | 45.0% | |
| TCCCCAGATTCTTCTATGCA+TGG | - | chr4.1:26173817-26173836 | None:intergenic | 45.0% | |
| TCTGGGAATTTCCCAGCAAT+GGG | + | chr4.1:26169711-26169730 | MS.gene006702:CDS | 45.0% | |
| TCTGTATTTGCTTGCACGGT+TGG | + | chr4.1:26173700-26173719 | MS.gene006702:CDS | 45.0% | |
| TGCTGAAACAACACCCCAAA+TGG | + | chr4.1:26170768-26170787 | MS.gene006702:CDS | 45.0% | |
| TGGGGAATAGGTCTTAGCTT+TGG | + | chr4.1:26171355-26171374 | MS.gene006702:CDS | 45.0% | |
| TGTATCCCTTTACCTCTAGC+AGG | - | chr4.1:26170827-26170846 | None:intergenic | 45.0% | |
| TGTGAGCAAAGGCTTAGTTG+CGG | + | chr4.1:26173540-26173559 | MS.gene006702:CDS | 45.0% | |
| TGTTATGAGGATGTCGGATG+AGG | + | chr4.1:26170631-26170650 | MS.gene006702:CDS | 45.0% | |
| TGTTCAGACCTAGGGATGAA+AGG | - | chr4.1:26171853-26171872 | None:intergenic | 45.0% | |
| TTGTCACAGCTGTAAGGGAT+GGG | + | chr4.1:26170996-26171015 | MS.gene006702:CDS | 45.0% | |
| TTTGTGGGAAGCCTATGTTC+TGG | + | chr4.1:26170217-26170236 | MS.gene006702:CDS | 45.0% | |
| ! | ACAGCTCTTCCTTGCCATTT+GGG | - | chr4.1:26170785-26170804 | None:intergenic | 45.0% |
| ! | AGCAGGATCAACAGAGTGTT+TGG | + | chr4.1:26170884-26170903 | MS.gene006702:CDS | 45.0% |
| ! | CAGCTTGTTTGCCAGAACAT+AGG | - | chr4.1:26170231-26170250 | None:intergenic | 45.0% |
| ! | TCTGAAACCAATCAGACCCT+AGG | - | chr4.1:26172874-26172893 | None:intergenic | 45.0% |
| ! | TGGTGATGACAGATCAGATG+AGG | + | chr4.1:26173621-26173640 | MS.gene006702:CDS | 45.0% |
| ! | TTCTGGGAATTTCCCAGCAA+TGG | + | chr4.1:26169710-26169729 | MS.gene006702:CDS | 45.0% |
| !! | GTGCTTTGGTTTGGCAATAC+AGG | + | chr4.1:26172374-26172393 | MS.gene006702:CDS | 45.0% |
| !!! | CCTTGGTTTTGGATCTTCTC+AGG | + | chr4.1:26172405-26172424 | MS.gene006702:CDS | 45.0% |
| !!! | TTTTTCAGGTGGTCCCAAGA+CGG | + | chr4.1:26172238-26172257 | MS.gene006702:intron | 45.0% |
| AAAGGTCCCTAGGGTCTGAT+TGG | + | chr4.1:26172864-26172883 | MS.gene006702:intron | 50.0% | |
| ACAAATGGCGATCAAAGCGG+TGG | - | chr4.1:26170202-26170221 | None:intergenic | 50.0% | |
| ACCGCTTTGATCGCCATTTG+TGG | + | chr4.1:26170201-26170220 | MS.gene006702:CDS | 50.0% | |
| ACTCAACAGGAACTTCTCCC+TGG | - | chr4.1:26172042-26172061 | None:intergenic | 50.0% | |
| ATTTCCCAGCAATGGGATCG+GGG | + | chr4.1:26169718-26169737 | MS.gene006702:CDS | 50.0% | |
| CATCAGGAGGCAGAAAAGTG+GGG | - | chr4.1:26170094-26170113 | None:intergenic | 50.0% | |
| CATGCCTGTTGGGATTCACA+TGG | + | chr4.1:26170595-26170614 | MS.gene006702:CDS | 50.0% | |
| CCCACAAATGGCGATCAAAG+CGG | - | chr4.1:26170205-26170224 | None:intergenic | 50.0% | |
| CCGCTTTGATCGCCATTTGT+GGG | + | chr4.1:26170202-26170221 | MS.gene006702:CDS | 50.0% | |
| CTCAGAGGTGGATGATGATC+AGG | + | chr4.1:26169803-26169822 | MS.gene006702:CDS | 50.0% | |
| CTGTTGGGATTCACATGGGT+CGG | + | chr4.1:26170600-26170619 | MS.gene006702:CDS | 50.0% | |
| GAATGTTGAAGCAACTGCGG+AGG | + | chr4.1:26171177-26171196 | MS.gene006702:CDS | 50.0% | |
| GACGGTGAATGGGAAACTTG+TGG | + | chr4.1:26172256-26172275 | MS.gene006702:CDS | 50.0% | |
| GCATAGCCCCTTTCCATCAT+CGG | + | chr4.1:26170379-26170398 | MS.gene006702:CDS | 50.0% | |
| GCATTGCAGGATGTGAGCAA+AGG | + | chr4.1:26173529-26173548 | MS.gene006702:intron | 50.0% | |
| GGTGTTCTCCATCGCTTAGT+GGG | + | chr4.1:26171134-26171153 | MS.gene006702:CDS | 50.0% | |
| GTATGTCAGCACTCATGACG+TGG | + | chr4.1:26171264-26171283 | MS.gene006702:CDS | 50.0% | |
| GTCTTATGGCAGTCATGCCA+GGG | + | chr4.1:26172022-26172041 | MS.gene006702:intron | 50.0% | |
| GTGTTCTCCATCGCTTAGTG+GGG | + | chr4.1:26171135-26171154 | MS.gene006702:CDS | 50.0% | |
| TAGGACTCTTCCTGTTAGGG+AGG | + | chr4.1:26170409-26170428 | MS.gene006702:CDS | 50.0% | |
| TATCGTTGAAGTGAAGCCCC+AGG | + | chr4.1:26172498-26172517 | MS.gene006702:CDS | 50.0% | |
| TCCTGCTGCAGTCGTATGTT+GGG | + | chr4.1:26170503-26170522 | MS.gene006702:CDS | 50.0% | |
| TGTCTTATGGCAGTCATGCC+AGG | + | chr4.1:26172021-26172040 | MS.gene006702:intron | 50.0% | |
| TTCCTGCTGCAGTCGTATGT+TGG | + | chr4.1:26170502-26170521 | MS.gene006702:CDS | 50.0% | |
| ! | AACAGAGTGTTTGGACGACC+TGG | + | chr4.1:26170893-26170912 | MS.gene006702:CDS | 50.0% |
| ! | ATCAGACCCTAGGGACCTTT+TGG | - | chr4.1:26172864-26172883 | None:intergenic | 50.0% |
| ! | CAGCTCTTCCTTGCCATTTG+GGG | - | chr4.1:26170784-26170803 | None:intergenic | 50.0% |
| ! | CATTGTTAGTGGACGGGGTA+GGG | + | chr4.1:26171582-26171601 | MS.gene006702:CDS | 50.0% |
| ! | GATGTCGGATGAGGAGTGTA+AGG | + | chr4.1:26170640-26170659 | MS.gene006702:CDS | 50.0% |
| ! | GCTGACTTTGTCCTGTGTGT+TGG | + | chr4.1:26173601-26173620 | MS.gene006702:CDS | 50.0% |
| ! | GGATGAGGAGTGTAAGGCAA+GGG | + | chr4.1:26170646-26170665 | MS.gene006702:CDS | 50.0% |
| ! | GTGATGGAGAGAAGCAGTTG+CGG | + | chr4.1:26171224-26171243 | MS.gene006702:CDS | 50.0% |
| ! | TCATTGTTAGTGGACGGGGT+AGG | + | chr4.1:26171581-26171600 | MS.gene006702:CDS | 50.0% |
| ACCCAACATACGACTGCAGC+AGG | - | chr4.1:26170507-26170526 | None:intergenic | 55.0% | |
| AGACATGGAGAGGGCTTGCA+CGG | + | chr4.1:26171312-26171331 | MS.gene006702:CDS | 55.0% | |
| CAATACAGGGATGCCGACCT+TGG | + | chr4.1:26172388-26172407 | MS.gene006702:CDS | 55.0% | |
| CGACCCATGTGAATCCCAAC+AGG | - | chr4.1:26170602-26170621 | None:intergenic | 55.0% | |
| CTTTGCGGCAACAGGCTCAT+TGG | - | chr4.1:26172467-26172486 | None:intergenic | 55.0% | |
| GCACTCATGACGTGGCTTAC+TGG | + | chr4.1:26171272-26171291 | MS.gene006702:CDS | 55.0% | |
| GGGCTATCCGTGTCAATCCA+TGG | + | chr4.1:26171155-26171174 | MS.gene006702:CDS | 55.0% | |
| GGGTGTTCTCCATCGCTTAG+TGG | + | chr4.1:26171133-26171152 | MS.gene006702:CDS | 55.0% | |
| GTGGTCCCAAGACGGTGAAT+GGG | + | chr4.1:26172246-26172265 | MS.gene006702:CDS | 55.0% | |
| TGACCACTCTTTGCGGCAAC+AGG | - | chr4.1:26172475-26172494 | None:intergenic | 55.0% | |
| ! | AGGGATGCCGACCTTGGTTT+TGG | + | chr4.1:26172394-26172413 | MS.gene006702:CDS | 55.0% |
| ! | CGGATGAGGAGTGTAAGGCA+AGG | + | chr4.1:26170645-26170664 | MS.gene006702:CDS | 55.0% |
| !! | TCCACCTCTGAGACAATCCC+CGG | - | chr4.1:26169795-26169814 | None:intergenic | 55.0% |
| AAGAACGAAGGCGGATGCCG+AGG | + | chr4.1:26169757-26169776 | MS.gene006702:CDS | 60.0% | |
| AGAACGAAGGCGGATGCCGA+GGG | + | chr4.1:26169758-26169777 | MS.gene006702:CDS | 60.0% | |
| CCCGGGACACTCATAACCCT+CGG | - | chr4.1:26169777-26169796 | None:intergenic | 60.0% | |
| CCGAGGGTTATGAGTGTCCC+GGG | + | chr4.1:26169774-26169793 | MS.gene006702:CDS | 60.0% | |
| CGAGGGTTATGAGTGTCCCG+GGG | + | chr4.1:26169775-26169794 | MS.gene006702:CDS | 60.0% | |
| CGGATAGCCCCACTAAGCGA+TGG | - | chr4.1:26171145-26171164 | None:intergenic | 60.0% | |
| GAGCCTGTTGCCGCAAAGAG+TGG | + | chr4.1:26172469-26172488 | MS.gene006702:CDS | 60.0% | |
| GCCGAGGGTTATGAGTGTCC+CGG | + | chr4.1:26169773-26169792 | MS.gene006702:CDS | 60.0% | |
| GGTGGTCCCAAGACGGTGAA+TGG | + | chr4.1:26172245-26172264 | MS.gene006702:intron | 60.0% | |
| TGTCCCGGGGATTGTCTCAG+AGG | + | chr4.1:26169788-26169807 | MS.gene006702:CDS | 60.0% | |
| !! | CCACCTCTGAGACAATCCCC+GGG | - | chr4.1:26169794-26169813 | None:intergenic | 60.0% |
| AATGGGATCGGGGTCGGGGA+GGG | + | chr4.1:26169728-26169747 | MS.gene006702:CDS | 65.0% | |
| CAGCAATGGGATCGGGGTCG+GGG | + | chr4.1:26169724-26169743 | MS.gene006702:CDS | 65.0% | |
| CCAGCAATGGGATCGGGGTC+GGG | + | chr4.1:26169723-26169742 | MS.gene006702:CDS | 65.0% | |
| CCCAGCAATGGGATCGGGGT+CGG | + | chr4.1:26169722-26169741 | MS.gene006702:CDS | 65.0% | |
| CCCGGGGATTGTCTCAGAGG+TGG | + | chr4.1:26169791-26169810 | MS.gene006702:CDS | 65.0% | |
| CCGACCCCGATCCCATTGCT+GGG | - | chr4.1:26169725-26169744 | None:intergenic | 65.0% | |
| CAATGGGATCGGGGTCGGGG+AGG | + | chr4.1:26169727-26169746 | MS.gene006702:CDS | 70.0% | |
| CCCGACCCCGATCCCATTGC+TGG | - | chr4.1:26169726-26169745 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 26169672 | 26173846 | 26169672 | ID=MS.gene006702 |
| chr4.1 | mRNA | 26169672 | 26173846 | 26169672 | ID=MS.gene006702.t1;Parent=MS.gene006702 |
| chr4.1 | exon | 26169672 | 26171674 | 26169672 | ID=MS.gene006702.t1.exon1;Parent=MS.gene006702.t1 |
| chr4.1 | CDS | 26169672 | 26171674 | 26169672 | ID=cds.MS.gene006702.t1;Parent=MS.gene006702.t1 |
| chr4.1 | exon | 26172246 | 26172519 | 26172246 | ID=MS.gene006702.t1.exon2;Parent=MS.gene006702.t1 |
| chr4.1 | CDS | 26172246 | 26172519 | 26172246 | ID=cds.MS.gene006702.t1;Parent=MS.gene006702.t1 |
| chr4.1 | exon | 26173538 | 26173846 | 26173538 | ID=MS.gene006702.t1.exon3;Parent=MS.gene006702.t1 |
| chr4.1 | CDS | 26173538 | 26173846 | 26173538 | ID=cds.MS.gene006702.t1;Parent=MS.gene006702.t1 |
| Gene Sequence |
| Protein sequence |
