Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71003.t1 | XP_024629627.1 | 99.4 | 856 | 5 | 0 | 1 | 856 | 1 | 856 | 0.00E+00 | 1744.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71003.t1 | Q9LRA7 | 74.9 | 867 | 206 | 4 | 1 | 855 | 1 | 867 | 0.0e+00 | 1365.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71003.t1 | A0A072U2F7 | 99.4 | 856 | 5 | 0 | 1 | 856 | 1 | 856 | 0.0e+00 | 1744.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57938 | MS.gene71003 | PPI |
| MS.gene015639 | MS.gene71003 | PPI |
| MS.gene045478 | MS.gene71003 | PPI |
| MS.gene71003 | MS.gene95324 | PPI |
| MS.gene040931 | MS.gene71003 | PPI |
| MS.gene71003 | MS.gene015639 | PPI |
| MS.gene71003 | MS.gene026499 | PPI |
| MS.gene95835 | MS.gene71003 | PPI |
| MS.gene75183 | MS.gene71003 | PPI |
| MS.gene62674 | MS.gene71003 | PPI |
| MS.gene71003 | MS.gene029463 | PPI |
| MS.gene71003 | MS.gene71778 | PPI |
| MS.gene035660 | MS.gene71003 | PPI |
| MS.gene018379 | MS.gene71003 | PPI |
| MS.gene012447 | MS.gene71003 | PPI |
| MS.gene71003 | MS.gene73417 | PPI |
| MS.gene71003 | MS.gene040931 | PPI |
| MS.gene009143 | MS.gene71003 | PPI |
| MS.gene71003 | MS.gene031592 | PPI |
| MS.gene038603 | MS.gene71003 | PPI |
| MS.gene83030 | MS.gene71003 | PPI |
| MS.gene71003 | MS.gene006702 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71003.t1 | MTR_8g063790 | 99.416 | 856 | 5 | 0 | 1 | 856 | 1 | 856 | 0.0 | 1766 |
| MS.gene71003.t1 | MTR_1g109620 | 66.627 | 845 | 274 | 2 | 1 | 839 | 1 | 843 | 0.0 | 1191 |
| MS.gene71003.t1 | MTR_4g080160 | 63.466 | 854 | 297 | 3 | 1 | 841 | 1 | 852 | 0.0 | 1150 |
| MS.gene71003.t1 | MTR_8g105740 | 65.258 | 852 | 280 | 7 | 1 | 839 | 1 | 849 | 0.0 | 1149 |
| MS.gene71003.t1 | MTR_1g032730 | 63.934 | 854 | 292 | 6 | 1 | 840 | 1 | 852 | 0.0 | 1131 |
| MS.gene71003.t1 | MTR_4g129270 | 62.247 | 792 | 289 | 5 | 52 | 839 | 55 | 840 | 0.0 | 1036 |
| MS.gene71003.t1 | MTR_4g129270 | 63.338 | 701 | 251 | 4 | 52 | 748 | 55 | 753 | 0.0 | 930 |
| MS.gene71003.t1 | MTR_3g078210 | 60.053 | 751 | 299 | 1 | 77 | 827 | 3 | 752 | 0.0 | 926 |
| MS.gene71003.t1 | MTR_3g467030 | 54.348 | 598 | 243 | 3 | 56 | 653 | 2 | 569 | 0.0 | 625 |
| MS.gene71003.t1 | MTR_2g073260 | 34.207 | 763 | 426 | 21 | 52 | 787 | 122 | 835 | 1.43e-134 | 425 |
| MS.gene71003.t1 | MTR_0034s0170 | 34.165 | 802 | 434 | 23 | 52 | 814 | 83 | 829 | 5.42e-132 | 417 |
| MS.gene71003.t1 | MTR_8g087910 | 36.023 | 347 | 199 | 5 | 36 | 374 | 53 | 384 | 8.82e-68 | 231 |
| MS.gene71003.t1 | MTR_3g076810 | 51.955 | 179 | 72 | 4 | 8 | 186 | 6 | 170 | 7.82e-52 | 179 |
| MS.gene71003.t1 | MTR_8g087930 | 30.892 | 437 | 248 | 13 | 381 | 800 | 10 | 409 | 3.81e-50 | 185 |
| MS.gene71003.t1 | MTR_3g467040 | 56.075 | 107 | 47 | 0 | 477 | 583 | 110 | 216 | 7.12e-33 | 127 |
| MS.gene71003.t1 | MTR_3g467040 | 48.624 | 109 | 56 | 0 | 302 | 410 | 1 | 109 | 3.13e-27 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71003.t1 | AT1G23870 | 74.510 | 867 | 209 | 3 | 1 | 855 | 1 | 867 | 0.0 | 1370 |
| MS.gene71003.t1 | AT1G70290 | 72.992 | 859 | 225 | 3 | 1 | 855 | 1 | 856 | 0.0 | 1338 |
| MS.gene71003.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
| MS.gene71003.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
| MS.gene71003.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
| MS.gene71003.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
| MS.gene71003.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
| MS.gene71003.t1 | AT1G70290 | 68.685 | 859 | 224 | 4 | 1 | 855 | 1 | 818 | 0.0 | 1241 |
| MS.gene71003.t1 | AT1G60140 | 73.580 | 757 | 194 | 1 | 1 | 751 | 1 | 757 | 0.0 | 1195 |
| MS.gene71003.t1 | AT4G17770 | 64.852 | 845 | 289 | 2 | 1 | 838 | 1 | 844 | 0.0 | 1177 |
| MS.gene71003.t1 | AT4G17770 | 64.852 | 845 | 289 | 2 | 1 | 838 | 1 | 844 | 0.0 | 1177 |
| MS.gene71003.t1 | AT1G68020 | 64.019 | 856 | 291 | 4 | 1 | 839 | 1 | 856 | 0.0 | 1156 |
| MS.gene71003.t1 | AT1G68020 | 64.019 | 856 | 291 | 4 | 1 | 839 | 1 | 856 | 0.0 | 1156 |
| MS.gene71003.t1 | AT1G06410 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1126 |
| MS.gene71003.t1 | AT1G06410 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1126 |
| MS.gene71003.t1 | AT1G06410 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1126 |
| MS.gene71003.t1 | AT2G18700 | 60.327 | 857 | 326 | 6 | 1 | 851 | 1 | 849 | 0.0 | 1080 |
| MS.gene71003.t1 | AT1G68020 | 63.476 | 679 | 231 | 4 | 1 | 662 | 1 | 679 | 0.0 | 915 |
| MS.gene71003.t1 | AT1G16980 | 35.688 | 807 | 458 | 24 | 48 | 834 | 7 | 772 | 7.05e-146 | 451 |
| MS.gene71003.t1 | AT4G27550 | 33.052 | 829 | 469 | 22 | 51 | 838 | 2 | 785 | 2.38e-133 | 417 |
| MS.gene71003.t1 | AT4G27550 | 32.931 | 829 | 477 | 22 | 52 | 838 | 3 | 794 | 1.25e-132 | 416 |
| MS.gene71003.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
| MS.gene71003.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
| MS.gene71003.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
| MS.gene71003.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
| MS.gene71003.t1 | AT1G16980 | 35.266 | 638 | 362 | 18 | 48 | 675 | 7 | 603 | 1.43e-118 | 374 |
Find 203 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACTTCACCCTGCAAATT+TGG | 0.106547 | 8.4:-37437361 | None:intergenic |
| TGGGGAATTGGTCTGGGCTT+GGG | 0.169334 | 8.4:+37437940 | MS.gene71003:CDS |
| CTGGGGAATTGGTCTGGGCT+TGG | 0.187166 | 8.4:+37437939 | MS.gene71003:CDS |
| CAAGATGCAGACCCTGATTT+TGG | 0.207528 | 8.4:+37438494 | MS.gene71003:CDS |
| AAGAGGATCAATGAAATTTA+TGG | 0.210673 | 8.4:+37437463 | MS.gene71003:CDS |
| CCAAGGGTTATGACTGTTCC+TGG | 0.261011 | 8.4:+37436371 | MS.gene71003:CDS |
| GGGGAATTGGTCTGGGCTTG+GGG | 0.266295 | 8.4:+37437941 | MS.gene71003:CDS |
| ATAAATCCTGCAAGGGGTTC+AGG | 0.270561 | 8.4:+37437397 | MS.gene71003:CDS |
| TTGAGAATTTCATCCCTTAC+TGG | 0.274615 | 8.4:-37436998 | None:intergenic |
| CTCTAAGCTAAAAGAGATTC+AGG | 0.278734 | 8.4:+37437234 | MS.gene71003:CDS |
| CTTCTCTGAGTGGGGCCATC+AGG | 0.282889 | 8.4:+37437728 | MS.gene71003:CDS |
| AAAGATAAGAAAGTTATTCT+TGG | 0.285155 | 8.4:+37437265 | MS.gene71003:CDS |
| CTGGAATTGGGCAAGATGTT+TGG | 0.285774 | 8.4:-37438994 | None:intergenic |
| GAATCAGATGTTAGTTCTTC+TGG | 0.292836 | 8.4:+37436416 | MS.gene71003:CDS |
| GCAAAGATCATTATACTAAA+AGG | 0.294692 | 8.4:+37437914 | MS.gene71003:CDS |
| CAAGTGGTCCAGCAATTCTT+TGG | 0.301605 | 8.4:-37438528 | None:intergenic |
| ATAACCCTTGGAAGACTTCT+TGG | 0.323153 | 8.4:-37436359 | None:intergenic |
| TGAGAAGGTTCTCTTGAATA+TGG | 0.324266 | 8.4:+37438740 | MS.gene71003:CDS |
| TACTCATGATGTGGCATATT+GGG | 0.324520 | 8.4:+37437858 | MS.gene71003:CDS |
| TCCCATCATCTGAAATTTAC+CGG | 0.324934 | 8.4:+37436969 | MS.gene71003:CDS |
| CAGCAATTCTTTGGCTTGGC+AGG | 0.325831 | 8.4:-37438519 | None:intergenic |
| CAACTTCACCCTGCAAATTT+GGG | 0.326749 | 8.4:-37437360 | None:intergenic |
| CACGAAATCTGGTGGATTAC+CGG | 0.327222 | 8.4:-37438769 | None:intergenic |
| TCCTTCCCTGAACCCCTTGC+AGG | 0.330095 | 8.4:-37437403 | None:intergenic |
| TTTAGTATAATGATCTTTGC+AGG | 0.332751 | 8.4:-37437911 | None:intergenic |
| GCTTGGCAGGAGCCAAAATC+AGG | 0.332771 | 8.4:-37438506 | None:intergenic |
| ACTAAAAGGTGCTGGGGAAT+TGG | 0.344491 | 8.4:+37437928 | MS.gene71003:CDS |
| TCTCAAAAGAAACCTGGAAT+TGG | 0.347950 | 8.4:-37439007 | None:intergenic |
| AAGGTGCTGGGGAATTGGTC+TGG | 0.348234 | 8.4:+37437933 | MS.gene71003:CDS |
| TGGAATTGGGCAAGATGTTT+GGG | 0.350397 | 8.4:-37438993 | None:intergenic |
| CTTGTTGTGTCTGAGTTCAT+TGG | 0.350593 | 8.4:+37437697 | MS.gene71003:CDS |
| GAGATATTGATACTGCTAAA+TGG | 0.353153 | 8.4:+37436492 | MS.gene71003:CDS |
| CCAATGCACATCACGAAATC+TGG | 0.354845 | 8.4:-37438780 | None:intergenic |
| CGATTTCATCGAGTTAAACT+TGG | 0.356832 | 8.4:+37436926 | MS.gene71003:CDS |
| GGGTTCAGGGAAGGATGTTC+AGG | 0.357166 | 8.4:+37437411 | MS.gene71003:CDS |
| TTGTTGAATTCGGATTTAAT+TGG | 0.359446 | 8.4:+37437025 | MS.gene71003:CDS |
| ATTTGTTTGCGGATCTTGAT+TGG | 0.360978 | 8.4:+37438378 | MS.gene71003:CDS |
| TTAAGCACAGATATGACTTC+AGG | 0.363121 | 8.4:-37438111 | None:intergenic |
| GGGATTATTTCTGACCTTGA+TGG | 0.367224 | 8.4:+37436392 | MS.gene71003:CDS |
| CTGCCAAGCCAAAGAATTGC+TGG | 0.368870 | 8.4:+37438520 | MS.gene71003:CDS |
| TCTCAAAGGATTGTTGAATT+CGG | 0.369451 | 8.4:+37437015 | MS.gene71003:CDS |
| CATACAAAAGAACTAGTAGA+AGG | 0.371718 | 8.4:+37438025 | MS.gene71003:CDS |
| AATATCGTGTTCATTGTTAG+TGG | 0.373245 | 8.4:+37438156 | MS.gene71003:CDS |
| ATAAGCACTCTTCTCGAAAC+GGG | 0.382221 | 8.4:-37437530 | None:intergenic |
| TTTAGCTTAGAGGATGTAGA+AGG | 0.386302 | 8.4:-37437223 | None:intergenic |
| AGCATATGGGTAGCATATAA+TGG | 0.386638 | 8.4:-37436745 | None:intergenic |
| CAAACATCTTGCCCAATTCC+AGG | 0.387739 | 8.4:+37438995 | MS.gene71003:CDS |
| GGGCCATCAGGGTCAATCCC+TGG | 0.389275 | 8.4:+37437740 | MS.gene71003:CDS |
| ATAAATTTCATTGATCCTCT+TGG | 0.390480 | 8.4:-37437461 | None:intergenic |
| TAACCCTTGGAAGACTTCTT+GGG | 0.392932 | 8.4:-37436358 | None:intergenic |
| TATGAATTTAGCCCTCAGTA+TGG | 0.393080 | 8.4:+37437786 | MS.gene71003:CDS |
| GCAGCAGAACCCAAATTTGC+AGG | 0.398626 | 8.4:+37437351 | MS.gene71003:CDS |
| GATGTTGTAAAGTTGCTTGA+TGG | 0.401203 | 8.4:+37438945 | MS.gene71003:CDS |
| CTGCAAACAATATATTTGTA+TGG | 0.405626 | 8.4:-37437610 | None:intergenic |
| GAATCTAAGCGCGGACATAT+AGG | 0.407020 | 8.4:+37437115 | MS.gene71003:CDS |
| CTTCTCAGCTACCAAACCTT+TGG | 0.411552 | 8.4:-37438724 | None:intergenic |
| GCCATCTTTCTTGATTATGA+TGG | 0.412733 | 8.4:+37438048 | MS.gene71003:CDS |
| ATCATTATACTAAAAGGTGC+TGG | 0.413565 | 8.4:+37437920 | MS.gene71003:CDS |
| GTTGTTCACCTTCTCTGAGT+GGG | 0.416077 | 8.4:+37437719 | MS.gene71003:CDS |
| GTCCGGTAAATTTCAGATGA+TGG | 0.420016 | 8.4:-37436971 | None:intergenic |
| TTCTATTACAATTAAAAGAC+GGG | 0.420368 | 8.4:+37436540 | MS.gene71003:CDS |
| ATCACCATGATCTGAGCATA+TGG | 0.421283 | 8.4:-37436759 | None:intergenic |
| CTCAAAAGAAACCTGGAATT+GGG | 0.424009 | 8.4:-37439006 | None:intergenic |
| TGAAATTGCTCAGAGATTAC+TGG | 0.424931 | 8.4:+37436631 | MS.gene71003:CDS |
| GTACTCATGATGTGGCATAT+TGG | 0.429323 | 8.4:+37437857 | MS.gene71003:CDS |
| CAAGAGATTCTCTGAATGAA+TGG | 0.436703 | 8.4:+37438184 | MS.gene71003:CDS |
| CAATATATTTGTATGGGACT+AGG | 0.441769 | 8.4:-37437603 | None:intergenic |
| CTGCTAAATGGTGTTTCAGT+TGG | 0.444648 | 8.4:+37436504 | MS.gene71003:CDS |
| CAAATATATTGTTTGCAGAC+AGG | 0.445837 | 8.4:+37437615 | MS.gene71003:CDS |
| CTTTGACCGAGTGCTTTGGC+AGG | 0.445978 | 8.4:+37436784 | MS.gene71003:CDS |
| TTTACCGGACTTTGCCAGTA+AGG | 0.446014 | 8.4:+37436984 | MS.gene71003:CDS |
| CAGACAGGGAACTGCAAAGC+TGG | 0.446931 | 8.4:+37437630 | MS.gene71003:CDS |
| ATGTTAGTTCTTCTGGATGT+CGG | 0.447873 | 8.4:+37436423 | MS.gene71003:CDS |
| CTGCAGGTCATGGGGTAGAA+AGG | 0.448467 | 8.4:-37436675 | None:intergenic |
| GGTGGAATAGCGACTCTGAA+TGG | 0.451271 | 8.4:+37438345 | MS.gene71003:intron |
| ATCGCTTTGACCGAGTGCTT+TGG | 0.451315 | 8.4:+37436780 | MS.gene71003:CDS |
| TGCGGATCTTGATTGGAAAC+AGG | 0.453319 | 8.4:+37438385 | MS.gene71003:CDS |
| CATATAGGACTTGATTACTT+TGG | 0.456053 | 8.4:+37437130 | MS.gene71003:CDS |
| ACAGGGAGTAACCAAAGGTT+TGG | 0.457006 | 8.4:+37438713 | MS.gene71003:intron |
| GTTTACATCATGCAAACTGC+TGG | 0.460290 | 8.4:+37438206 | MS.gene71003:CDS |
| CCAGATTTCGTGATGTGCAT+TGG | 0.463267 | 8.4:+37438780 | MS.gene71003:CDS |
| GGCAAACATGTTGCCGCTGC+AGG | 0.463803 | 8.4:+37436463 | MS.gene71003:CDS |
| TGAAGTCAAGGAAAGTGCTT+TGG | 0.467204 | 8.4:+37438460 | MS.gene71003:CDS |
| TAAATCCTGCAAGGGGTTCA+GGG | 0.467451 | 8.4:+37437398 | MS.gene71003:CDS |
| CACAGATATGACTTCAGGGC+TGG | 0.467927 | 8.4:-37438106 | None:intergenic |
| TGTTAGTTCTTCTGGATGTC+GGG | 0.472937 | 8.4:+37436424 | MS.gene71003:CDS |
| CAAAGGTTTGGTAGCTGAGA+AGG | 0.472991 | 8.4:+37438725 | MS.gene71003:CDS |
| AGGTGCTGGGGAATTGGTCT+GGG | 0.473831 | 8.4:+37437934 | MS.gene71003:CDS |
| CTGTGCTCTCAAAAGAAACC+TGG | 0.476062 | 8.4:-37439013 | None:intergenic |
| AGAGTTATTTCACTTTCTCA+TGG | 0.477242 | 8.4:+37437967 | MS.gene71003:CDS |
| CTGCAGTAGAATGCTAGGTC+TGG | 0.477809 | 8.4:+37437087 | MS.gene71003:CDS |
| GTTGCATCGTCAATGCTGTA+AGG | 0.478965 | 8.4:+37437569 | MS.gene71003:CDS |
| TTCTCTGAGTGGGGCCATCA+GGG | 0.481545 | 8.4:+37437729 | MS.gene71003:CDS |
| ATGAATTTAGCCCTCAGTAT+GGG | 0.482655 | 8.4:+37437787 | MS.gene71003:CDS |
| CAAGGGTTATGACTGTTCCT+GGG | 0.488044 | 8.4:+37436372 | MS.gene71003:CDS |
| CAAAGAATTGCTGGACCACT+TGG | 0.490557 | 8.4:+37438529 | MS.gene71003:CDS |
| TCTTGCTGCAGTAGAATGCT+AGG | 0.494534 | 8.4:+37437082 | MS.gene71003:CDS |
| AGCAACTGCATCTATATCCC+AGG | 0.496254 | 8.4:-37437758 | None:intergenic |
| TCCGGTAAATTTCAGATGAT+GGG | 0.500703 | 8.4:-37436970 | None:intergenic |
| TCAAATTATAAATCCTGCAA+GGG | 0.500735 | 8.4:+37437390 | MS.gene71003:CDS |
| TCTGTATACGACTGCATGAC+AGG | 0.500792 | 8.4:-37438416 | None:intergenic |
| GGTCCAGCAATTCTTTGGCT+TGG | 0.501011 | 8.4:-37438523 | None:intergenic |
| ACCCAAACAAAATCATCATC+GGG | 0.501271 | 8.4:-37436860 | None:intergenic |
| TGCTAAATGGTGTTTCAGTT+GGG | 0.502656 | 8.4:+37436505 | MS.gene71003:CDS |
| CATCCCTTACTGGCAAAGTC+CGG | 0.504874 | 8.4:-37436988 | None:intergenic |
| CTCTTGAATATGGTTAATGC+CGG | 0.507275 | 8.4:+37438750 | MS.gene71003:CDS |
| ATTCTATTACAATTAAAAGA+CGG | 0.514519 | 8.4:+37436539 | MS.gene71003:CDS |
| AATAAGCACTCTTCTCGAAA+CGG | 0.515130 | 8.4:-37437531 | None:intergenic |
| CTACCCATATGCTCAGATCA+TGG | 0.515637 | 8.4:+37436755 | MS.gene71003:CDS |
| AACCCAAACAAAATCATCAT+CGG | 0.516929 | 8.4:-37436861 | None:intergenic |
| TCGTGTTCATTGTTAGTGGA+AGG | 0.517631 | 8.4:+37438160 | MS.gene71003:CDS |
| GAACCAGCAATTGTTAAAAG+AGG | 0.517681 | 8.4:+37438569 | MS.gene71003:CDS |
| ACAGATATGACTTCAGGGCT+GGG | 0.520588 | 8.4:-37438105 | None:intergenic |
| GTGGAATAGCGACTCTGAAT+GGG | 0.520863 | 8.4:+37438346 | MS.gene71003:CDS |
| AAATATATTGTTTGCAGACA+GGG | 0.522683 | 8.4:+37437616 | MS.gene71003:CDS |
| ATGGTGTTTCAGTTGGGATG+AGG | 0.523696 | 8.4:+37436511 | MS.gene71003:CDS |
| TAAGCACAGATATGACTTCA+GGG | 0.524391 | 8.4:-37438110 | None:intergenic |
| GGCCATCAGGGTCAATCCCT+GGG | 0.525071 | 8.4:+37437741 | MS.gene71003:CDS |
| GTTCTTCTGGATGTCGGGAG+CGG | 0.526826 | 8.4:+37436429 | MS.gene71003:CDS |
| TCATTATACTAAAAGGTGCT+GGG | 0.528112 | 8.4:+37437921 | MS.gene71003:CDS |
| TGCTGATACAATATGGTCAA+TGG | 0.528241 | 8.4:-37438004 | None:intergenic |
| GGAAACAAGTCATTTGTTTG+CGG | 0.528499 | 8.4:+37438367 | MS.gene71003:CDS |
| TTCAAATTATAAATCCTGCA+AGG | 0.529329 | 8.4:+37437389 | MS.gene71003:CDS |
| ATCGTCAATGCTGTAAGGGA+TGG | 0.532615 | 8.4:+37437574 | MS.gene71003:CDS |
| TGGATCTAATATTGAAGTCA+AGG | 0.535654 | 8.4:+37438448 | MS.gene71003:CDS |
| TGAGATAGATGCTAGTGAGC+AGG | 0.537498 | 8.4:+37436607 | MS.gene71003:CDS |
| CCAGGAACAGTCATAACCCT+TGG | 0.540553 | 8.4:-37436371 | None:intergenic |
| GCTTAACTTCAACAATATGC+TGG | 0.541548 | 8.4:-37438592 | None:intergenic |
| CAATCTGAAATTTCTAGCTG+TGG | 0.541729 | 8.4:+37437318 | MS.gene71003:CDS |
| GCCATCATAATCAAGAAAGA+TGG | 0.544414 | 8.4:-37438049 | None:intergenic |
| TTGTTCACCTTCTCTGAGTG+GGG | 0.546280 | 8.4:+37437720 | MS.gene71003:CDS |
| TATTGTTGAAGTTAAGCCAC+AGG | 0.548984 | 8.4:+37438598 | MS.gene71003:CDS |
| CAGATATGACTTCAGGGCTG+GGG | 0.549497 | 8.4:-37438104 | None:intergenic |
| CTGGGACTTGCAGCTGAACA+TGG | 0.550416 | 8.4:+37438225 | MS.gene71003:CDS |
| AATCGTTTCCTCAAGAAAGT+AGG | 0.550967 | 8.4:-37436908 | None:intergenic |
| TAAGAAAGTTATTCTTGGTG+TGG | 0.551636 | 8.4:+37437270 | MS.gene71003:CDS |
| TGAATTTAGCCCTCAGTATG+GGG | 0.553092 | 8.4:+37437788 | MS.gene71003:CDS |
| TGCAAACAATATATTTGTAT+GGG | 0.553617 | 8.4:-37437609 | None:intergenic |
| GGAAGACTTCTTGGGGTGTG+AGG | 0.553746 | 8.4:-37436350 | None:intergenic |
| TGCAAAGCTGGATGAAGCTG+TGG | 0.555064 | 8.4:+37437642 | MS.gene71003:CDS |
| TTACCGGACTTTGCCAGTAA+GGG | 0.558832 | 8.4:+37436985 | MS.gene71003:CDS |
| CATAAGCCTGCCAAAGCACT+CGG | 0.561670 | 8.4:-37436790 | None:intergenic |
| AATCTATGTGGGTTCGCTCA+AGG | 0.563455 | 8.4:+37436583 | MS.gene71003:CDS |
| TGATACTGAGGTAATCTATG+TGG | 0.564061 | 8.4:+37436571 | MS.gene71003:CDS |
| TCACCATGATCTGAGCATAT+GGG | 0.565672 | 8.4:-37436758 | None:intergenic |
| GAGCGGTCAATGATAATGAC+TGG | 0.567271 | 8.4:-37437502 | None:intergenic |
| TCAAGGTCAGAAATAATCCC+AGG | 0.567364 | 8.4:-37436389 | None:intergenic |
| CGTGTTCATTGTTAGTGGAA+GGG | 0.567716 | 8.4:+37438161 | MS.gene71003:CDS |
| TCCTGCAAGGGGTTCAGGGA+AGG | 0.568476 | 8.4:+37437402 | MS.gene71003:CDS |
| GGTTGTTCACCTTCTCTGAG+TGG | 0.569153 | 8.4:+37437718 | MS.gene71003:CDS |
| GATTTCATCGAGTTAAACTT+GGG | 0.570858 | 8.4:+37436927 | MS.gene71003:CDS |
| CAGGATTTATAATTTGAACA+AGG | 0.572858 | 8.4:-37437384 | None:intergenic |
| AATATTTGCAGACAAAGTCA+TGG | 0.573166 | 8.4:+37436826 | MS.gene71003:CDS |
| GATACTGAGGTAATCTATGT+GGG | 0.575365 | 8.4:+37436572 | MS.gene71003:CDS |
| TATTCTTGGTGTGGACGACA+TGG | 0.577773 | 8.4:+37437279 | MS.gene71003:CDS |
| AGATATGACTTCAGGGCTGG+GGG | 0.578681 | 8.4:-37438103 | None:intergenic |
| CATATCGATAGTGTTTCTCA+TGG | 0.584215 | 8.4:-37437831 | None:intergenic |
| TCTTTACAGGGAGTAACCAA+AGG | 0.585367 | 8.4:+37438708 | MS.gene71003:intron |
| TTTGATTTGTTGAGGTAGCG+AGG | 0.586241 | 8.4:-37438968 | None:intergenic |
| CGGTAGGAATTCACATGGGT+AGG | 0.588120 | 8.4:+37437179 | MS.gene71003:CDS |
| ATCCCAGGGATTGACCCTGA+TGG | 0.588505 | 8.4:-37437743 | None:intergenic |
| ATACAAAAGAACTAGTAGAA+GGG | 0.590862 | 8.4:+37438026 | MS.gene71003:CDS |
| AACCCTTGGAAGACTTCTTG+GGG | 0.592251 | 8.4:-37436357 | None:intergenic |
| TCGTATACAGAAGCAACTGA+TGG | 0.593251 | 8.4:+37438428 | MS.gene71003:CDS |
| ACACCCCAAGAAGTCTTCCA+AGG | 0.595682 | 8.4:+37436354 | MS.gene71003:CDS |
| CTACCCATGTGAATTCCTAC+CGG | 0.597503 | 8.4:-37437178 | None:intergenic |
| ATGATGGGAAAGGACTATGA+AGG | 0.602097 | 8.4:-37436955 | None:intergenic |
| AAGCTTATTTAATTGCCAAG+AGG | 0.604527 | 8.4:+37437446 | MS.gene71003:CDS |
| CGGGAGCTGATGGTAACGAC+GGG | 0.607532 | 8.4:-37438857 | None:intergenic |
| TAAATTTCAGATGATGGGAA+AGG | 0.607697 | 8.4:-37436965 | None:intergenic |
| GTAAGGGATGAAATTCTCAA+AGG | 0.608917 | 8.4:+37437001 | MS.gene71003:CDS |
| CAAATTATAAATCCTGCAAG+GGG | 0.610053 | 8.4:+37437391 | MS.gene71003:CDS |
| TTTACATCATGCAAACTGCT+GGG | 0.611466 | 8.4:+37438207 | MS.gene71003:CDS |
| ATGCACATCACGAAATCTGG+TGG | 0.613992 | 8.4:-37438777 | None:intergenic |
| CTGATGGCCCCACTCAGAGA+AGG | 0.614227 | 8.4:-37437727 | None:intergenic |
| TGATGTGCATTGGAGATGAT+AGG | 0.616649 | 8.4:+37438790 | MS.gene71003:CDS |
| CATTATACTAAAAGGTGCTG+GGG | 0.617606 | 8.4:+37437922 | MS.gene71003:CDS |
| CAGCAGAACCCAAATTTGCA+GGG | 0.618312 | 8.4:+37437352 | MS.gene71003:CDS |
| TAACATCTGATTCACCATCA+AGG | 0.622114 | 8.4:-37436406 | None:intergenic |
| ATATGTTAGTACTCATGATG+TGG | 0.622726 | 8.4:+37437849 | MS.gene71003:CDS |
| CAGGTCATGGGGTAGAAAGG+TGG | 0.624978 | 8.4:-37436672 | None:intergenic |
| ACTGGATGACTTTAATTGCG+TGG | 0.625192 | 8.4:+37436649 | MS.gene71003:CDS |
| CTTGGCAGGAGCCAAAATCA+GGG | 0.629827 | 8.4:-37438505 | None:intergenic |
| TCGTCAATGCTGTAAGGGAT+GGG | 0.634025 | 8.4:+37437575 | MS.gene71003:CDS |
| GAATTTAGCCCTCAGTATGG+GGG | 0.635859 | 8.4:+37437789 | MS.gene71003:CDS |
| GGTAGGTAGGAAGCCTAGCA+AGG | 0.637239 | 8.4:+37438896 | MS.gene71003:CDS |
| GGTAGCATATAATGGAAGAG+AGG | 0.639482 | 8.4:-37436737 | None:intergenic |
| AAGTAGGCAAAATCATCAAG+TGG | 0.641749 | 8.4:-37436892 | None:intergenic |
| CACCCCAAGAAGTCTTCCAA+GGG | 0.641869 | 8.4:+37436355 | MS.gene71003:CDS |
| GCAACTGCATCTATATCCCA+GGG | 0.642398 | 8.4:-37437757 | None:intergenic |
| TCAAGGAAAGTGCTTTGGTG+TGG | 0.650646 | 8.4:+37438465 | MS.gene71003:CDS |
| TAGCAAGAACACTTTCCAAG+TGG | 0.651389 | 8.4:-37438544 | None:intergenic |
| TCGGGAGCTGATGGTAACGA+CGG | 0.659800 | 8.4:-37438858 | None:intergenic |
| TTTGCCGGTAGGAATTCACA+TGG | 0.662631 | 8.4:+37437174 | MS.gene71003:CDS |
| TTGCATCGTCAATGCTGTAA+GGG | 0.663687 | 8.4:+37437570 | MS.gene71003:CDS |
| TAAGCACTCTTCTCGAAACG+GGG | 0.682811 | 8.4:-37437529 | None:intergenic |
| GCAAAGCTGGATGAAGCTGT+GGG | 0.684464 | 8.4:+37437643 | MS.gene71003:CDS |
| ACAACAAGCATGCTTGTACG+AGG | 0.685754 | 8.4:-37437682 | None:intergenic |
| TCGGGAGCGGAAAATCATTG+TGG | 0.689766 | 8.4:+37436442 | MS.gene71003:CDS |
| TCTCGAAACGGGGAACAGAG+CGG | 0.692951 | 8.4:-37437519 | None:intergenic |
| GGATCTTGATTGGAAACAGG+TGG | 0.695331 | 8.4:+37438388 | MS.gene71003:CDS |
| CTGGACTATGAATCTAAGCG+CGG | 0.708845 | 8.4:+37437106 | MS.gene71003:CDS |
| TTGCCGGTAGGAATTCACAT+GGG | 0.730503 | 8.4:+37437175 | MS.gene71003:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTTTTCTATTCTTT+TGG | - | chr8.4:37438300-37438319 | None:intergenic | 10.0% |
| !! | ATTCTATTACAATTAAAAGA+CGG | + | chr8.4:37436539-37436558 | MS.gene71003:CDS | 15.0% |
| !!! | AAATTTTGATAAATATAGTG+CGG | - | chr8.4:37437156-37437175 | None:intergenic | 15.0% |
| !!! | GTTTTATTAATATAAGATTG+TGG | - | chr8.4:37438084-37438103 | None:intergenic | 15.0% |
| !!! | TAATGTATTTTTTTATTTGC+AGG | + | chr8.4:37438324-37438343 | MS.gene71003:intron | 15.0% |
| !!! | TATATTTATCAAAATTTTGC+CGG | + | chr8.4:37437159-37437178 | MS.gene71003:CDS | 15.0% |
| !! | AAAGATAAGAAAGTTATTCT+TGG | + | chr8.4:37437265-37437284 | MS.gene71003:CDS | 20.0% |
| !! | TGCAAACAATATATTTGTAT+GGG | - | chr8.4:37437612-37437631 | None:intergenic | 20.0% |
| !! | TTCTATTACAATTAAAAGAC+GGG | + | chr8.4:37436540-37436559 | MS.gene71003:CDS | 20.0% |
| !!! | ATTTTTTTCTATTCTTTTGG+TGG | - | chr8.4:37438297-37438316 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTATTCTTTTGGT+GGG | - | chr8.4:37438296-37438315 | None:intergenic | 20.0% |
| ! | AAATATATTGTTTGCAGACA+GGG | + | chr8.4:37437616-37437635 | MS.gene71003:CDS | 25.0% |
| ! | AAGAGGATCAATGAAATTTA+TGG | + | chr8.4:37437463-37437482 | MS.gene71003:CDS | 25.0% |
| ! | ATAAATTTCATTGATCCTCT+TGG | - | chr8.4:37437464-37437483 | None:intergenic | 25.0% |
| ! | ATACAAAAGAACTAGTAGAA+GGG | + | chr8.4:37438026-37438045 | MS.gene71003:CDS | 25.0% |
| ! | CAGGATTTATAATTTGAACA+AGG | - | chr8.4:37437387-37437406 | None:intergenic | 25.0% |
| ! | CTGCAAACAATATATTTGTA+TGG | - | chr8.4:37437613-37437632 | None:intergenic | 25.0% |
| ! | GCAAAGATCATTATACTAAA+AGG | + | chr8.4:37437914-37437933 | MS.gene71003:CDS | 25.0% |
| ! | TCAAATTATAAATCCTGCAA+GGG | + | chr8.4:37437390-37437409 | MS.gene71003:CDS | 25.0% |
| ! | TTCAAATTATAAATCCTGCA+AGG | + | chr8.4:37437389-37437408 | MS.gene71003:CDS | 25.0% |
| ! | TTGTTGAATTCGGATTTAAT+TGG | + | chr8.4:37437025-37437044 | MS.gene71003:CDS | 25.0% |
| ! | TTTAGTATAATGATCTTTGC+AGG | - | chr8.4:37437914-37437933 | None:intergenic | 25.0% |
| !! | AACAATGAACACGATATTTT+TGG | - | chr8.4:37438154-37438173 | None:intergenic | 25.0% |
| !! | TCATGAATTTTCTCTTTACA+GGG | + | chr8.4:37438696-37438715 | MS.gene71003:intron | 25.0% |
| !! | TTTTGTATGCTGATACAATA+TGG | - | chr8.4:37438014-37438033 | None:intergenic | 25.0% |
| !!! | TGTATTTTTTTATTTGCAGG+TGG | + | chr8.4:37438327-37438346 | MS.gene71003:intron | 25.0% |
| !!! | TTTTTTCTATTCTTTTGGTG+GGG | - | chr8.4:37438295-37438314 | None:intergenic | 25.0% |
| AACCCAAACAAAATCATCAT+CGG | - | chr8.4:37436864-37436883 | None:intergenic | 30.0% | |
| AAGCTTATTTAATTGCCAAG+AGG | + | chr8.4:37437446-37437465 | MS.gene71003:CDS | 30.0% | |
| AATATCGTGTTCATTGTTAG+TGG | + | chr8.4:37438156-37438175 | MS.gene71003:CDS | 30.0% | |
| AATATTTGCAGACAAAGTCA+TGG | + | chr8.4:37436826-37436845 | MS.gene71003:CDS | 30.0% | |
| AATTTGAAAAACTCTACCTG+TGG | - | chr8.4:37438617-37438636 | None:intergenic | 30.0% | |
| ATATGTTAGTACTCATGATG+TGG | + | chr8.4:37437849-37437868 | MS.gene71003:CDS | 30.0% | |
| CAAATATATTGTTTGCAGAC+AGG | + | chr8.4:37437615-37437634 | MS.gene71003:CDS | 30.0% | |
| CAAATTATAAATCCTGCAAG+GGG | + | chr8.4:37437391-37437410 | MS.gene71003:CDS | 30.0% | |
| CAATATATTTGTATGGGACT+AGG | - | chr8.4:37437606-37437625 | None:intergenic | 30.0% | |
| CATACAAAAGAACTAGTAGA+AGG | + | chr8.4:37438025-37438044 | MS.gene71003:CDS | 30.0% | |
| CATATAGGACTTGATTACTT+TGG | + | chr8.4:37437130-37437149 | MS.gene71003:CDS | 30.0% | |
| GAGATATTGATACTGCTAAA+TGG | + | chr8.4:37436492-37436511 | MS.gene71003:CDS | 30.0% | |
| GATTTCATCGAGTTAAACTT+GGG | + | chr8.4:37436927-37436946 | MS.gene71003:CDS | 30.0% | |
| TAAGAAAGTTATTCTTGGTG+TGG | + | chr8.4:37437270-37437289 | MS.gene71003:CDS | 30.0% | |
| TCTCAAAGGATTGTTGAATT+CGG | + | chr8.4:37437015-37437034 | MS.gene71003:CDS | 30.0% | |
| TGGATCTAATATTGAAGTCA+AGG | + | chr8.4:37438448-37438467 | MS.gene71003:CDS | 30.0% | |
| ! | AGAAAATATTTTGCCTTGCT+AGG | - | chr8.4:37438912-37438931 | None:intergenic | 30.0% |
| ! | AGAGTTATTTCACTTTCTCA+TGG | + | chr8.4:37437967-37437986 | MS.gene71003:CDS | 30.0% |
| ! | ATCATTATACTAAAAGGTGC+TGG | + | chr8.4:37437920-37437939 | MS.gene71003:CDS | 30.0% |
| ! | GTCATGAATTTTCTCTTTAC+AGG | + | chr8.4:37438695-37438714 | MS.gene71003:intron | 30.0% |
| ! | TTTATCAAAATTTTGCCGGT+AGG | + | chr8.4:37437163-37437182 | MS.gene71003:CDS | 30.0% |
| ! | TTTCACTTTCTCATGGTTTT+AGG | + | chr8.4:37437974-37437993 | MS.gene71003:CDS | 30.0% |
| !! | GACGACATGGATATTTTTAA+GGG | + | chr8.4:37437292-37437311 | MS.gene71003:CDS | 30.0% |
| !! | TAAATTTCAGATGATGGGAA+AGG | - | chr8.4:37436968-37436987 | None:intergenic | 30.0% |
| !! | TCATTATACTAAAAGGTGCT+GGG | + | chr8.4:37437921-37437940 | MS.gene71003:CDS | 30.0% |
| !!! | CTGAACATGGTTACTTTTTA+AGG | + | chr8.4:37438238-37438257 | MS.gene71003:CDS | 30.0% |
| AAGTAGGCAAAATCATCAAG+TGG | - | chr8.4:37436895-37436914 | None:intergenic | 35.0% | |
| AATAAGCACTCTTCTCGAAA+CGG | - | chr8.4:37437534-37437553 | None:intergenic | 35.0% | |
| AATCGTTTCCTCAAGAAAGT+AGG | - | chr8.4:37436911-37436930 | None:intergenic | 35.0% | |
| ACCCAAACAAAATCATCATC+GGG | - | chr8.4:37436863-37436882 | None:intergenic | 35.0% | |
| AGCATATGGGTAGCATATAA+TGG | - | chr8.4:37436748-37436767 | None:intergenic | 35.0% | |
| ATGAATTTAGCCCTCAGTAT+GGG | + | chr8.4:37437787-37437806 | MS.gene71003:CDS | 35.0% | |
| ATTTGTTTGCGGATCTTGAT+TGG | + | chr8.4:37438378-37438397 | MS.gene71003:CDS | 35.0% | |
| CAAGAGATTCTCTGAATGAA+TGG | + | chr8.4:37438184-37438203 | MS.gene71003:CDS | 35.0% | |
| CATATCGATAGTGTTTCTCA+TGG | - | chr8.4:37437834-37437853 | None:intergenic | 35.0% | |
| CGATTTCATCGAGTTAAACT+TGG | + | chr8.4:37436926-37436945 | MS.gene71003:CDS | 35.0% | |
| CTCAAAAGAAACCTGGAATT+GGG | - | chr8.4:37439009-37439028 | None:intergenic | 35.0% | |
| CTCTAAGCTAAAAGAGATTC+AGG | + | chr8.4:37437234-37437253 | MS.gene71003:CDS | 35.0% | |
| CTCTTGAATATGGTTAATGC+CGG | + | chr8.4:37438750-37438769 | MS.gene71003:CDS | 35.0% | |
| CTGCAGAAAAAGTTCTATCT+TGG | + | chr8.4:37436692-37436711 | MS.gene71003:CDS | 35.0% | |
| GAACCAGCAATTGTTAAAAG+AGG | + | chr8.4:37438569-37438588 | MS.gene71003:CDS | 35.0% | |
| GATACTGAGGTAATCTATGT+GGG | + | chr8.4:37436572-37436591 | MS.gene71003:CDS | 35.0% | |
| GATGTTGTAAAGTTGCTTGA+TGG | + | chr8.4:37438945-37438964 | MS.gene71003:CDS | 35.0% | |
| GCCATCATAATCAAGAAAGA+TGG | - | chr8.4:37438052-37438071 | None:intergenic | 35.0% | |
| GCCATCTTTCTTGATTATGA+TGG | + | chr8.4:37438048-37438067 | MS.gene71003:CDS | 35.0% | |
| GCTTAACTTCAACAATATGC+TGG | - | chr8.4:37438595-37438614 | None:intergenic | 35.0% | |
| GGAAACAAGTCATTTGTTTG+CGG | + | chr8.4:37438367-37438386 | MS.gene71003:CDS | 35.0% | |
| GTAAGGGATGAAATTCTCAA+AGG | + | chr8.4:37437001-37437020 | MS.gene71003:CDS | 35.0% | |
| TAACATCTGATTCACCATCA+AGG | - | chr8.4:37436409-37436428 | None:intergenic | 35.0% | |
| TAAGCACAGATATGACTTCA+GGG | - | chr8.4:37438113-37438132 | None:intergenic | 35.0% | |
| TACTCATGATGTGGCATATT+GGG | + | chr8.4:37437858-37437877 | MS.gene71003:CDS | 35.0% | |
| TATGAATTTAGCCCTCAGTA+TGG | + | chr8.4:37437786-37437805 | MS.gene71003:CDS | 35.0% | |
| TATTGTTGAAGTTAAGCCAC+AGG | + | chr8.4:37438598-37438617 | MS.gene71003:CDS | 35.0% | |
| TCCGGTAAATTTCAGATGAT+GGG | - | chr8.4:37436973-37436992 | None:intergenic | 35.0% | |
| TCTCAAAAGAAACCTGGAAT+TGG | - | chr8.4:37439010-37439029 | None:intergenic | 35.0% | |
| TGAAATTGCTCAGAGATTAC+TGG | + | chr8.4:37436631-37436650 | MS.gene71003:CDS | 35.0% | |
| TGAGAAGGTTCTCTTGAATA+TGG | + | chr8.4:37438740-37438759 | MS.gene71003:CDS | 35.0% | |
| TGATACTGAGGTAATCTATG+TGG | + | chr8.4:37436571-37436590 | MS.gene71003:CDS | 35.0% | |
| TGCTAAATGGTGTTTCAGTT+GGG | + | chr8.4:37436505-37436524 | MS.gene71003:CDS | 35.0% | |
| TGCTGATACAATATGGTCAA+TGG | - | chr8.4:37438007-37438026 | None:intergenic | 35.0% | |
| TTAAGCACAGATATGACTTC+AGG | - | chr8.4:37438114-37438133 | None:intergenic | 35.0% | |
| TTGAGAATTTCATCCCTTAC+TGG | - | chr8.4:37437001-37437020 | None:intergenic | 35.0% | |
| TTTACATCATGCAAACTGCT+GGG | + | chr8.4:37438207-37438226 | MS.gene71003:CDS | 35.0% | |
| ! | AATCTTTTAGACTTAGCTGG+TGG | + | chr8.4:37436311-37436330 | MS.gene71003:CDS | 35.0% |
| ! | ATCCCGATGATGATTTTGTT+TGG | + | chr8.4:37436858-37436877 | MS.gene71003:CDS | 35.0% |
| ! | ATGTTAGTTCTTCTGGATGT+CGG | + | chr8.4:37436423-37436442 | MS.gene71003:CDS | 35.0% |
| ! | CTTACTAGTTTCACTGTTAG+AGG | - | chr8.4:37438655-37438674 | None:intergenic | 35.0% |
| ! | GAATCAGATGTTAGTTCTTC+TGG | + | chr8.4:37436416-37436435 | MS.gene71003:CDS | 35.0% |
| ! | GCTAATCTTTTAGACTTAGC+TGG | + | chr8.4:37436308-37436327 | MS.gene71003:CDS | 35.0% |
| ! | TCCCATCATCTGAAATTTAC+CGG | + | chr8.4:37436969-37436988 | MS.gene71003:CDS | 35.0% |
| ! | TGATTTTGCCTACTTTCTTG+AGG | + | chr8.4:37436900-37436919 | MS.gene71003:CDS | 35.0% |
| ! | TTTAGCTTAGAGGATGTAGA+AGG | - | chr8.4:37437226-37437245 | None:intergenic | 35.0% |
| !! | CAAGATAGAACTTTTTCTGC+AGG | - | chr8.4:37436694-37436713 | None:intergenic | 35.0% |
| !! | CAATCTGAAATTTCTAGCTG+TGG | + | chr8.4:37437318-37437337 | MS.gene71003:CDS | 35.0% |
| !! | CATTATACTAAAAGGTGCTG+GGG | + | chr8.4:37437922-37437941 | MS.gene71003:CDS | 35.0% |
| !! | GGACGACATGGATATTTTTA+AGG | + | chr8.4:37437291-37437310 | MS.gene71003:CDS | 35.0% |
| !! | TCCCGATGATGATTTTGTTT+GGG | + | chr8.4:37436859-37436878 | MS.gene71003:CDS | 35.0% |
| !!! | CTGAATCTCTTTTAGCTTAG+AGG | - | chr8.4:37437236-37437255 | None:intergenic | 35.0% |
| !!! | TTTGGGCTTTTGATTTGTTG+AGG | - | chr8.4:37438979-37438998 | None:intergenic | 35.0% |
| ACAACTTCACCCTGCAAATT+TGG | - | chr8.4:37437364-37437383 | None:intergenic | 40.0% | |
| ACTGGATGACTTTAATTGCG+TGG | + | chr8.4:37436649-37436668 | MS.gene71003:CDS | 40.0% | |
| ATAACCCTTGGAAGACTTCT+TGG | - | chr8.4:37436362-37436381 | None:intergenic | 40.0% | |
| ATAAGCACTCTTCTCGAAAC+GGG | - | chr8.4:37437533-37437552 | None:intergenic | 40.0% | |
| ATCACCATGATCTGAGCATA+TGG | - | chr8.4:37436762-37436781 | None:intergenic | 40.0% | |
| CAACTTCACCCTGCAAATTT+GGG | - | chr8.4:37437363-37437382 | None:intergenic | 40.0% | |
| CGTGTTCATTGTTAGTGGAA+GGG | + | chr8.4:37438161-37438180 | MS.gene71003:CDS | 40.0% | |
| CTGCTAAATGGTGTTTCAGT+TGG | + | chr8.4:37436504-37436523 | MS.gene71003:CDS | 40.0% | |
| GTACTCATGATGTGGCATAT+TGG | + | chr8.4:37437857-37437876 | MS.gene71003:CDS | 40.0% | |
| GTCCGGTAAATTTCAGATGA+TGG | - | chr8.4:37436974-37436993 | None:intergenic | 40.0% | |
| GTTTACATCATGCAAACTGC+TGG | + | chr8.4:37438206-37438225 | MS.gene71003:CDS | 40.0% | |
| TAACCCTTGGAAGACTTCTT+GGG | - | chr8.4:37436361-37436380 | None:intergenic | 40.0% | |
| TACCGTGCAAGCAAAAATCT+CGG | - | chr8.4:37438880-37438899 | None:intergenic | 40.0% | |
| TAGCAAGAACACTTTCCAAG+TGG | - | chr8.4:37438547-37438566 | None:intergenic | 40.0% | |
| TCAAGGTCAGAAATAATCCC+AGG | - | chr8.4:37436392-37436411 | None:intergenic | 40.0% | |
| TCACCATGATCTGAGCATAT+GGG | - | chr8.4:37436761-37436780 | None:intergenic | 40.0% | |
| TCGTATACAGAAGCAACTGA+TGG | + | chr8.4:37438428-37438447 | MS.gene71003:CDS | 40.0% | |
| TCGTGTTCATTGTTAGTGGA+AGG | + | chr8.4:37438160-37438179 | MS.gene71003:CDS | 40.0% | |
| TCTTTACAGGGAGTAACCAA+AGG | + | chr8.4:37438708-37438727 | MS.gene71003:intron | 40.0% | |
| TGAATTTAGCCCTCAGTATG+GGG | + | chr8.4:37437788-37437807 | MS.gene71003:CDS | 40.0% | |
| TGATGTGCATTGGAGATGAT+AGG | + | chr8.4:37438790-37438809 | MS.gene71003:CDS | 40.0% | |
| TGGAATTGGGCAAGATGTTT+GGG | - | chr8.4:37438996-37439015 | None:intergenic | 40.0% | |
| TTGCATCGTCAATGCTGTAA+GGG | + | chr8.4:37437570-37437589 | MS.gene71003:CDS | 40.0% | |
| ! | ATATCTCTTTTAGCCTGCAG+CGG | - | chr8.4:37436479-37436498 | None:intergenic | 40.0% |
| ! | ATGATGGGAAAGGACTATGA+AGG | - | chr8.4:37436958-37436977 | None:intergenic | 40.0% |
| ! | CTTGTTGTGTCTGAGTTCAT+TGG | + | chr8.4:37437697-37437716 | MS.gene71003:CDS | 40.0% |
| ! | GGTAGCATATAATGGAAGAG+AGG | - | chr8.4:37436740-37436759 | None:intergenic | 40.0% |
| ! | TGGCCTCTTTTAACAATTGC+TGG | - | chr8.4:37438575-37438594 | None:intergenic | 40.0% |
| ! | TGTTAGTTCTTCTGGATGTC+GGG | + | chr8.4:37436424-37436443 | MS.gene71003:CDS | 40.0% |
| !! | AACTTTTTCTGCAGGTCATG+GGG | - | chr8.4:37436686-37436705 | None:intergenic | 40.0% |
| !! | ACGCAGTTTTATGCAGGATT+TGG | + | chr8.4:37437882-37437901 | MS.gene71003:CDS | 40.0% |
| !! | AGAACTTTTTCTGCAGGTCA+TGG | - | chr8.4:37436688-37436707 | None:intergenic | 40.0% |
| !! | GAACTTTTTCTGCAGGTCAT+GGG | - | chr8.4:37436687-37436706 | None:intergenic | 40.0% |
| !! | GGGATTATTTCTGACCTTGA+TGG | + | chr8.4:37436392-37436411 | MS.gene71003:CDS | 40.0% |
| !! | TGAAGTCAAGGAAAGTGCTT+TGG | + | chr8.4:37438460-37438479 | MS.gene71003:CDS | 40.0% |
| !! | TTTGATTTGTTGAGGTAGCG+AGG | - | chr8.4:37438971-37438990 | None:intergenic | 40.0% |
| AACCCTTGGAAGACTTCTTG+GGG | - | chr8.4:37436360-37436379 | None:intergenic | 45.0% | |
| AATCTATGTGGGTTCGCTCA+AGG | + | chr8.4:37436583-37436602 | MS.gene71003:CDS | 45.0% | |
| ACAACAAGCATGCTTGTACG+AGG | - | chr8.4:37437685-37437704 | None:intergenic | 45.0% | |
| ACAGATATGACTTCAGGGCT+GGG | - | chr8.4:37438108-37438127 | None:intergenic | 45.0% | |
| ACAGGGAGTAACCAAAGGTT+TGG | + | chr8.4:37438713-37438732 | MS.gene71003:intron | 45.0% | |
| ACCGTGCAAGCAAAAATCTC+GGG | - | chr8.4:37438879-37438898 | None:intergenic | 45.0% | |
| AGCAACTGCATCTATATCCC+AGG | - | chr8.4:37437761-37437780 | None:intergenic | 45.0% | |
| ATAAATCCTGCAAGGGGTTC+AGG | + | chr8.4:37437397-37437416 | MS.gene71003:CDS | 45.0% | |
| ATCGTCAATGCTGTAAGGGA+TGG | + | chr8.4:37437574-37437593 | MS.gene71003:CDS | 45.0% | |
| ATGCACATCACGAAATCTGG+TGG | - | chr8.4:37438780-37438799 | None:intergenic | 45.0% | |
| ATGGTGTTTCAGTTGGGATG+AGG | + | chr8.4:37436511-37436530 | MS.gene71003:CDS | 45.0% | |
| CAAACATCTTGCCCAATTCC+AGG | + | chr8.4:37438995-37439014 | MS.gene71003:CDS | 45.0% | |
| CAAAGAATTGCTGGACCACT+TGG | + | chr8.4:37438529-37438548 | MS.gene71003:CDS | 45.0% | |
| CAAGGGTTATGACTGTTCCT+GGG | + | chr8.4:37436372-37436391 | MS.gene71003:CDS | 45.0% | |
| CAAGTGGTCCAGCAATTCTT+TGG | - | chr8.4:37438531-37438550 | None:intergenic | 45.0% | |
| CAGCAGAACCCAAATTTGCA+GGG | + | chr8.4:37437352-37437371 | MS.gene71003:CDS | 45.0% | |
| CCAATGCACATCACGAAATC+TGG | - | chr8.4:37438783-37438802 | None:intergenic | 45.0% | |
| CCAGATTTCGTGATGTGCAT+TGG | + | chr8.4:37438780-37438799 | MS.gene71003:CDS | 45.0% | |
| CTACCCATATGCTCAGATCA+TGG | + | chr8.4:37436755-37436774 | MS.gene71003:CDS | 45.0% | |
| CTACCCATGTGAATTCCTAC+CGG | - | chr8.4:37437181-37437200 | None:intergenic | 45.0% | |
| CTGGAATTGGGCAAGATGTT+TGG | - | chr8.4:37438997-37439016 | None:intergenic | 45.0% | |
| CTGGACTATGAATCTAAGCG+CGG | + | chr8.4:37437106-37437125 | MS.gene71003:CDS | 45.0% | |
| CTGTGCTCTCAAAAGAAACC+TGG | - | chr8.4:37439016-37439035 | None:intergenic | 45.0% | |
| CTTCTCAGCTACCAAACCTT+TGG | - | chr8.4:37438727-37438746 | None:intergenic | 45.0% | |
| GAATCTAAGCGCGGACATAT+AGG | + | chr8.4:37437115-37437134 | MS.gene71003:CDS | 45.0% | |
| GAATTTAGCCCTCAGTATGG+GGG | + | chr8.4:37437789-37437808 | MS.gene71003:CDS | 45.0% | |
| GACTGAGGAGGAAGAAACAA+AGG | - | chr8.4:37438271-37438290 | None:intergenic | 45.0% | |
| GCAACTGCATCTATATCCCA+GGG | - | chr8.4:37437760-37437779 | None:intergenic | 45.0% | |
| GGATCTTGATTGGAAACAGG+TGG | + | chr8.4:37438388-37438407 | MS.gene71003:CDS | 45.0% | |
| GTGGAATAGCGACTCTGAAT+GGG | + | chr8.4:37438346-37438365 | MS.gene71003:CDS | 45.0% | |
| GTTGCATCGTCAATGCTGTA+AGG | + | chr8.4:37437569-37437588 | MS.gene71003:CDS | 45.0% | |
| GTTGTTCACCTTCTCTGAGT+GGG | + | chr8.4:37437719-37437738 | MS.gene71003:CDS | 45.0% | |
| TAAATCCTGCAAGGGGTTCA+GGG | + | chr8.4:37437398-37437417 | MS.gene71003:CDS | 45.0% | |
| TAAGCACTCTTCTCGAAACG+GGG | - | chr8.4:37437532-37437551 | None:intergenic | 45.0% | |
| TCGTCAATGCTGTAAGGGAT+GGG | + | chr8.4:37437575-37437594 | MS.gene71003:CDS | 45.0% | |
| TCTGTATACGACTGCATGAC+AGG | - | chr8.4:37438419-37438438 | None:intergenic | 45.0% | |
| TCTTGCTGCAGTAGAATGCT+AGG | + | chr8.4:37437082-37437101 | MS.gene71003:CDS | 45.0% | |
| TGAGATAGATGCTAGTGAGC+AGG | + | chr8.4:37436607-37436626 | MS.gene71003:CDS | 45.0% | |
| TGCGGATCTTGATTGGAAAC+AGG | + | chr8.4:37438385-37438404 | MS.gene71003:CDS | 45.0% | |
| TTACCGGACTTTGCCAGTAA+GGG | + | chr8.4:37436985-37437004 | MS.gene71003:CDS | 45.0% | |
| TTGCCGGTAGGAATTCACAT+GGG | + | chr8.4:37437175-37437194 | MS.gene71003:CDS | 45.0% | |
| TTGTTCACCTTCTCTGAGTG+GGG | + | chr8.4:37437720-37437739 | MS.gene71003:CDS | 45.0% | |
| TTTACCGGACTTTGCCAGTA+AGG | + | chr8.4:37436984-37437003 | MS.gene71003:CDS | 45.0% | |
| TTTGCCGGTAGGAATTCACA+TGG | + | chr8.4:37437174-37437193 | MS.gene71003:CDS | 45.0% | |
| ! | CAAAGGTTTGGTAGCTGAGA+AGG | + | chr8.4:37438725-37438744 | MS.gene71003:CDS | 45.0% |
| ! | CAAGATGCAGACCCTGATTT+TGG | + | chr8.4:37438494-37438513 | MS.gene71003:CDS | 45.0% |
| ! | CGGGTTTTCTTCTGATACTG+AGG | + | chr8.4:37436559-37436578 | MS.gene71003:CDS | 45.0% |
| ! | GAGATTTTTGCTTGCACGGT+AGG | + | chr8.4:37438879-37438898 | MS.gene71003:CDS | 45.0% |
| ! | GAGCGGTCAATGATAATGAC+TGG | - | chr8.4:37437505-37437524 | None:intergenic | 45.0% |
| ! | GTTTTTGTAAGCAGCAGCTC+TGG | + | chr8.4:37436714-37436733 | MS.gene71003:CDS | 45.0% |
| ! | TATTCTTGGTGTGGACGACA+TGG | + | chr8.4:37437279-37437298 | MS.gene71003:CDS | 45.0% |
| ! | TCCCGAGATTTTTGCTTGCA+CGG | + | chr8.4:37438875-37438894 | MS.gene71003:CDS | 45.0% |
| ! | TTTTTGCTTGCACGGTAGGT+AGG | + | chr8.4:37438883-37438902 | MS.gene71003:CDS | 45.0% |
| !! | ACTAAAAGGTGCTGGGGAAT+TGG | + | chr8.4:37437928-37437947 | MS.gene71003:CDS | 45.0% |
| !! | CACGAAATCTGGTGGATTAC+CGG | - | chr8.4:37438772-37438791 | None:intergenic | 45.0% |
| !! | TCAAGGAAAGTGCTTTGGTG+TGG | + | chr8.4:37438465-37438484 | MS.gene71003:CDS | 45.0% |
| ACACCCCAAGAAGTCTTCCA+AGG | + | chr8.4:37436354-37436373 | MS.gene71003:CDS | 50.0% | |
| AGATATGACTTCAGGGCTGG+GGG | - | chr8.4:37438106-37438125 | None:intergenic | 50.0% | |
| ATCGCTTTGACCGAGTGCTT+TGG | + | chr8.4:37436780-37436799 | MS.gene71003:CDS | 50.0% | |
| CACAGATATGACTTCAGGGC+TGG | - | chr8.4:37438109-37438128 | None:intergenic | 50.0% | |
| CACCCCAAGAAGTCTTCCAA+GGG | + | chr8.4:37436355-37436374 | MS.gene71003:CDS | 50.0% | |
| CAGATATGACTTCAGGGCTG+GGG | - | chr8.4:37438107-37438126 | None:intergenic | 50.0% | |
| CATCCCTTACTGGCAAAGTC+CGG | - | chr8.4:37436991-37437010 | None:intergenic | 50.0% | |
| CCAAGGGTTATGACTGTTCC+TGG | + | chr8.4:37436371-37436390 | MS.gene71003:CDS | 50.0% | |
| CCAGGAACAGTCATAACCCT+TGG | - | chr8.4:37436374-37436393 | None:intergenic | 50.0% | |
| CGGTAGGAATTCACATGGGT+AGG | + | chr8.4:37437179-37437198 | MS.gene71003:CDS | 50.0% | |
| CTCAGAAACCCCCATACTGA+GGG | - | chr8.4:37437800-37437819 | None:intergenic | 50.0% | |
| CTGCAGTAGAATGCTAGGTC+TGG | + | chr8.4:37437087-37437106 | MS.gene71003:CDS | 50.0% | |
| CTGCCAAGCCAAAGAATTGC+TGG | + | chr8.4:37438520-37438539 | MS.gene71003:CDS | 50.0% | |
| CTTGGCAGGAGCCAAAATCA+GGG | - | chr8.4:37438508-37438527 | None:intergenic | 50.0% | |
| GCAAAAATCTCGGGAGCTGA+TGG | - | chr8.4:37438870-37438889 | None:intergenic | 50.0% | |
| GCAAAGCTGGATGAAGCTGT+GGG | + | chr8.4:37437643-37437662 | MS.gene71003:CDS | 50.0% | |
| GCAGCAGAACCCAAATTTGC+AGG | + | chr8.4:37437351-37437370 | MS.gene71003:CDS | 50.0% | |
| GGTCCAGCAATTCTTTGGCT+TGG | - | chr8.4:37438526-37438545 | None:intergenic | 50.0% | |
| GGTGGAATAGCGACTCTGAA+TGG | + | chr8.4:37438345-37438364 | MS.gene71003:intron | 50.0% | |
| GGTTGTTCACCTTCTCTGAG+TGG | + | chr8.4:37437718-37437737 | MS.gene71003:CDS | 50.0% | |
| TCGGGAGCGGAAAATCATTG+TGG | + | chr8.4:37436442-37436461 | MS.gene71003:CDS | 50.0% | |
| TCTCAGAAACCCCCATACTG+AGG | - | chr8.4:37437801-37437820 | None:intergenic | 50.0% | |
| TGCAAAGCTGGATGAAGCTG+TGG | + | chr8.4:37437642-37437661 | MS.gene71003:CDS | 50.0% | |
| ! | CATAAGCCTGCCAAAGCACT+CGG | - | chr8.4:37436793-37436812 | None:intergenic | 50.0% |
| ! | TTCTTTTGGTGGGGTGACTG+AGG | - | chr8.4:37438286-37438305 | None:intergenic | 50.0% |
| !! | CAGCAATTCTTTGGCTTGGC+AGG | - | chr8.4:37438522-37438541 | None:intergenic | 50.0% |
| !! | TTGGGCACGCAGTTTTATGC+AGG | + | chr8.4:37437876-37437895 | MS.gene71003:CDS | 50.0% |
| ATCCCAGGGATTGACCCTGA+TGG | - | chr8.4:37437746-37437765 | None:intergenic | 55.0% | |
| CAGACAGGGAACTGCAAAGC+TGG | + | chr8.4:37437630-37437649 | MS.gene71003:CDS | 55.0% | |
| CAGGTCATGGGGTAGAAAGG+TGG | - | chr8.4:37436675-37436694 | None:intergenic | 55.0% | |
| CTGCAGGTCATGGGGTAGAA+AGG | - | chr8.4:37436678-37436697 | None:intergenic | 55.0% | |
| CTGGGACTTGCAGCTGAACA+TGG | + | chr8.4:37438225-37438244 | MS.gene71003:CDS | 55.0% | |
| CTTTGACCGAGTGCTTTGGC+AGG | + | chr8.4:37436784-37436803 | MS.gene71003:CDS | 55.0% | |
| GCTTGGCAGGAGCCAAAATC+AGG | - | chr8.4:37438509-37438528 | None:intergenic | 55.0% | |
| GGAAGACTTCTTGGGGTGTG+AGG | - | chr8.4:37436353-37436372 | None:intergenic | 55.0% | |
| GGGTTCAGGGAAGGATGTTC+AGG | + | chr8.4:37437411-37437430 | MS.gene71003:CDS | 55.0% | |
| GGTAGGTAGGAAGCCTAGCA+AGG | + | chr8.4:37438896-37438915 | MS.gene71003:CDS | 55.0% | |
| GTTCTTCTGGATGTCGGGAG+CGG | + | chr8.4:37436429-37436448 | MS.gene71003:CDS | 55.0% | |
| TCTCGAAACGGGGAACAGAG+CGG | - | chr8.4:37437522-37437541 | None:intergenic | 55.0% | |
| TTCTCTGAGTGGGGCCATCA+GGG | + | chr8.4:37437729-37437748 | MS.gene71003:CDS | 55.0% | |
| ! | TCGGGAGCTGATGGTAACGA+CGG | - | chr8.4:37438861-37438880 | None:intergenic | 55.0% |
| ! | TGGGGAATTGGTCTGGGCTT+GGG | + | chr8.4:37437940-37437959 | MS.gene71003:CDS | 55.0% |
| ! | TTTTGGTGGGGTGACTGAGG+AGG | - | chr8.4:37438283-37438302 | None:intergenic | 55.0% |
| !! | AAGGTGCTGGGGAATTGGTC+TGG | + | chr8.4:37437933-37437952 | MS.gene71003:CDS | 55.0% |
| !! | AGGTGCTGGGGAATTGGTCT+GGG | + | chr8.4:37437934-37437953 | MS.gene71003:CDS | 55.0% |
| CTGATGGCCCCACTCAGAGA+AGG | - | chr8.4:37437730-37437749 | None:intergenic | 60.0% | |
| CTTCTCTGAGTGGGGCCATC+AGG | + | chr8.4:37437728-37437747 | MS.gene71003:CDS | 60.0% | |
| GGCAAACATGTTGCCGCTGC+AGG | + | chr8.4:37436463-37436482 | MS.gene71003:CDS | 60.0% | |
| GGCCATCAGGGTCAATCCCT+GGG | + | chr8.4:37437741-37437760 | MS.gene71003:CDS | 60.0% | |
| TCCTGCAAGGGGTTCAGGGA+AGG | + | chr8.4:37437402-37437421 | MS.gene71003:CDS | 60.0% | |
| TCCTTCCCTGAACCCCTTGC+AGG | - | chr8.4:37437406-37437425 | None:intergenic | 60.0% | |
| ! | CGGGAGCTGATGGTAACGAC+GGG | - | chr8.4:37438860-37438879 | None:intergenic | 60.0% |
| ! | CTGGGGAATTGGTCTGGGCT+TGG | + | chr8.4:37437939-37437958 | MS.gene71003:CDS | 60.0% |
| ! | GGGGAATTGGTCTGGGCTTG+GGG | + | chr8.4:37437941-37437960 | MS.gene71003:CDS | 60.0% |
| GGGCCATCAGGGTCAATCCC+TGG | + | chr8.4:37437740-37437759 | MS.gene71003:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 37436290 | 37439043 | 37436290 | ID=MS.gene71003 |
| chr8.4 | mRNA | 37436290 | 37439043 | 37436290 | ID=MS.gene71003.t1;Parent=MS.gene71003 |
| chr8.4 | exon | 37436290 | 37438259 | 37436290 | ID=MS.gene71003.t1.exon1;Parent=MS.gene71003.t1 |
| chr8.4 | CDS | 37436290 | 37438259 | 37436290 | ID=cds.MS.gene71003.t1;Parent=MS.gene71003.t1 |
| chr8.4 | exon | 37438346 | 37438619 | 37438346 | ID=MS.gene71003.t1.exon2;Parent=MS.gene71003.t1 |
| chr8.4 | CDS | 37438346 | 37438619 | 37438346 | ID=cds.MS.gene71003.t1;Parent=MS.gene71003.t1 |
| chr8.4 | exon | 37438717 | 37439043 | 37438717 | ID=MS.gene71003.t1.exon3;Parent=MS.gene71003.t1 |
| chr8.4 | CDS | 37438717 | 37439043 | 37438717 | ID=cds.MS.gene71003.t1;Parent=MS.gene71003.t1 |
| Gene Sequence |
| Protein sequence |
