Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73417.t1 | XP_013470155.1 | 99.2 | 854 | 7 | 0 | 1 | 854 | 1 | 854 | 0.00E+00 | 1716 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73417.t1 | O23617 | 77.4 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0e+00 | 1370.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73417.t1 | A0A072VRW8 | 99.2 | 854 | 7 | 0 | 1 | 854 | 1 | 854 | 0.0e+00 | 1716.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018379 | MS.gene73417 | PPI |
| MS.gene012447 | MS.gene73417 | PPI |
| MS.gene73417 | MS.gene006702 | PPI |
| MS.gene035660 | MS.gene73417 | PPI |
| MS.gene009143 | MS.gene73417 | PPI |
| MS.gene95324 | MS.gene73417 | PPI |
| MS.gene038603 | MS.gene73417 | PPI |
| MS.gene83030 | MS.gene73417 | PPI |
| MS.gene57938 | MS.gene73417 | PPI |
| MS.gene015639 | MS.gene73417 | PPI |
| MS.gene73417 | MS.gene026499 | PPI |
| MS.gene045478 | MS.gene73417 | PPI |
| MS.gene040931 | MS.gene73417 | PPI |
| MS.gene71003 | MS.gene73417 | PPI |
| MS.gene95835 | MS.gene73417 | PPI |
| MS.gene73417 | MS.gene031592 | PPI |
| MS.gene62674 | MS.gene73417 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73417.t1 | MTR_1g109620 | 99.180 | 854 | 7 | 0 | 1 | 854 | 1 | 854 | 0.0 | 1766 |
| MS.gene73417.t1 | MTR_8g105740 | 72.824 | 850 | 223 | 5 | 1 | 843 | 1 | 849 | 0.0 | 1312 |
| MS.gene73417.t1 | MTR_1g032730 | 72.535 | 852 | 224 | 6 | 1 | 843 | 1 | 851 | 0.0 | 1300 |
| MS.gene73417.t1 | MTR_4g080160 | 64.947 | 853 | 288 | 3 | 1 | 844 | 1 | 851 | 0.0 | 1204 |
| MS.gene73417.t1 | MTR_8g063790 | 66.982 | 845 | 271 | 2 | 1 | 843 | 1 | 839 | 0.0 | 1182 |
| MS.gene73417.t1 | MTR_4g129270 | 60.050 | 801 | 310 | 7 | 52 | 846 | 47 | 843 | 0.0 | 1003 |
| MS.gene73417.t1 | MTR_4g129270 | 57.784 | 758 | 311 | 6 | 1 | 754 | 1 | 753 | 0.0 | 902 |
| MS.gene73417.t1 | MTR_3g078210 | 53.766 | 770 | 353 | 2 | 83 | 850 | 3 | 771 | 0.0 | 845 |
| MS.gene73417.t1 | MTR_3g467030 | 49.082 | 599 | 275 | 3 | 61 | 659 | 1 | 569 | 0.0 | 576 |
| MS.gene73417.t1 | MTR_2g073260 | 34.279 | 811 | 464 | 20 | 1 | 792 | 74 | 834 | 2.41e-144 | 451 |
| MS.gene73417.t1 | MTR_0034s0170 | 35.714 | 756 | 423 | 21 | 58 | 792 | 83 | 796 | 8.20e-140 | 438 |
| MS.gene73417.t1 | MTR_8g087910 | 38.040 | 347 | 196 | 7 | 37 | 380 | 54 | 384 | 1.06e-70 | 239 |
| MS.gene73417.t1 | MTR_8g087930 | 32.877 | 438 | 244 | 14 | 387 | 806 | 10 | 415 | 6.68e-57 | 204 |
| MS.gene73417.t1 | MTR_3g076810 | 43.243 | 185 | 85 | 3 | 8 | 192 | 6 | 170 | 1.00e-45 | 162 |
| MS.gene73417.t1 | MTR_3g467040 | 53.271 | 107 | 50 | 0 | 483 | 589 | 110 | 216 | 1.28e-32 | 126 |
| MS.gene73417.t1 | MTR_3g467040 | 41.228 | 114 | 67 | 0 | 308 | 421 | 1 | 114 | 4.28e-23 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73417.t1 | AT4G17770 | 77.374 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0 | 1410 |
| MS.gene73417.t1 | AT4G17770 | 77.374 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0 | 1410 |
| MS.gene73417.t1 | AT1G68020 | 71.114 | 862 | 224 | 6 | 1 | 843 | 1 | 856 | 0.0 | 1301 |
| MS.gene73417.t1 | AT1G68020 | 71.114 | 862 | 224 | 6 | 1 | 843 | 1 | 856 | 0.0 | 1301 |
| MS.gene73417.t1 | AT1G06410 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1181 |
| MS.gene73417.t1 | AT1G06410 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1181 |
| MS.gene73417.t1 | AT1G06410 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1181 |
| MS.gene73417.t1 | AT1G23870 | 63.860 | 855 | 307 | 1 | 1 | 853 | 1 | 855 | 0.0 | 1158 |
| MS.gene73417.t1 | AT1G70290 | 62.426 | 841 | 309 | 3 | 1 | 839 | 1 | 836 | 0.0 | 1120 |
| MS.gene73417.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene73417.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene73417.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene73417.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene73417.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene73417.t1 | AT1G68020 | 71.701 | 682 | 170 | 5 | 1 | 665 | 1 | 676 | 0.0 | 1045 |
| MS.gene73417.t1 | AT2G18700 | 58.392 | 846 | 338 | 7 | 1 | 842 | 1 | 836 | 0.0 | 1043 |
| MS.gene73417.t1 | AT1G70290 | 58.621 | 841 | 303 | 4 | 1 | 839 | 1 | 798 | 0.0 | 1030 |
| MS.gene73417.t1 | AT1G60140 | 61.804 | 754 | 288 | 0 | 1 | 754 | 1 | 754 | 0.0 | 1007 |
| MS.gene73417.t1 | AT1G16980 | 34.761 | 817 | 462 | 26 | 60 | 850 | 13 | 784 | 1.28e-145 | 450 |
| MS.gene73417.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene73417.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene73417.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene73417.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene73417.t1 | AT4G27550 | 33.976 | 830 | 450 | 27 | 56 | 837 | 1 | 780 | 3.20e-137 | 427 |
| MS.gene73417.t1 | AT4G27550 | 34.135 | 832 | 455 | 28 | 56 | 837 | 1 | 789 | 1.52e-136 | 426 |
| MS.gene73417.t1 | AT1G16980 | 35.220 | 636 | 353 | 20 | 60 | 681 | 13 | 603 | 6.65e-118 | 373 |
Find 197 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGATAGCTTTCTAAAGTT+TGG | 0.197254 | 1.4:+83908063 | None:intergenic |
| CTTCTGAATTCTGACCTTAT+AGG | 0.215099 | 1.4:-83909023 | MS.gene73417:CDS |
| AGATGCTGGGGAATTGGTTT+TGG | 0.230491 | 1.4:-83908114 | MS.gene73417:CDS |
| CCACCAGCATGCTCTTCTTT+TGG | 0.238177 | 1.4:+83908367 | None:intergenic |
| AGGAATCAGCTTAAAACTTT+TGG | 0.239280 | 1.4:-83908736 | MS.gene73417:CDS |
| TTCTGAATTCTGACCTTATA+GGG | 0.267422 | 1.4:-83909022 | MS.gene73417:CDS |
| TGTGTCTTCCAAGTAATATT+TGG | 0.281526 | 1.4:+83906617 | None:intergenic |
| CTTCCTGTTGGTATTCATAT+AGG | 0.288144 | 1.4:-83908873 | MS.gene73417:CDS |
| CATCATTAAGCGGCGCGATT+CGG | 0.290810 | 1.4:-83908320 | MS.gene73417:CDS |
| CAAGCACCGAGCGATTCTTT+TGG | 0.298713 | 1.4:-83908010 | MS.gene73417:CDS |
| CCAAGAGTGGCAACTGTTGC+TGG | 0.299481 | 1.4:-83909695 | MS.gene73417:CDS |
| CACAATGAAAACACAATTCT+TGG | 0.302805 | 1.4:+83907897 | None:intergenic |
| GAATTTGCAGACCGAGATTT+CGG | 0.306462 | 1.4:-83907485 | MS.gene73417:CDS |
| CAGATAGCTTTCTAAAGTTT+GGG | 0.314076 | 1.4:+83908064 | None:intergenic |
| TCCTTTCCGCGGCCTCTAGC+AGG | 0.317442 | 1.4:+83908645 | None:intergenic |
| TTGCTTAATGAGGAGATAAC+TGG | 0.325875 | 1.4:+83906526 | None:intergenic |
| TACGCACGATGTTGCATATT+GGG | 0.340179 | 1.4:-83908190 | MS.gene73417:CDS |
| CCAAACCAGAGCACTCTCTT+TGG | 0.342936 | 1.4:+83907514 | None:intergenic |
| TCTTTCCTTTGTGCCTTCAA+TGG | 0.344898 | 1.4:+83909572 | None:intergenic |
| TTTGGATTATGATAGTACTA+TGG | 0.345249 | 1.4:-83907992 | MS.gene73417:CDS |
| AGCTATGGATTCCGCCTTAA+TGG | 0.346795 | 1.4:-83908265 | MS.gene73417:CDS |
| GGTTTAACTTCCACAATGTA+TGG | 0.356426 | 1.4:+83907386 | None:intergenic |
| GCAACATCATCTTGCTCAAT+TGG | 0.362213 | 1.4:+83909431 | None:intergenic |
| TCTGTATATAACTGCATAAC+TGG | 0.363196 | 1.4:+83907563 | None:intergenic |
| AGGAGGAGATGCTGGGGAAT+TGG | 0.363586 | 1.4:-83908120 | MS.gene73417:CDS |
| AAGCTTCCCATTCTTCAGTA+TGG | 0.363738 | 1.4:+83907627 | None:intergenic |
| AGATCAGATGAGGACATGTT+TGG | 0.364020 | 1.4:-83906720 | MS.gene73417:CDS |
| TTCAGACTCCGGGACCATTA+AGG | 0.365240 | 1.4:+83908251 | None:intergenic |
| CTTCCGCTGTCGCCTGATCT+TGG | 0.368992 | 1.4:-83909293 | MS.gene73417:CDS |
| CTAAGAAGTTCATCTCTAAC+AGG | 0.372241 | 1.4:+83909050 | None:intergenic |
| CCAATGCATAGAACAAAATC+TGG | 0.378049 | 1.4:+83906750 | None:intergenic |
| GTTGTATCGATCAAGATTAC+AGG | 0.378659 | 1.4:+83908546 | None:intergenic |
| GGTTCATGACTACCACTTGA+TGG | 0.384948 | 1.4:-83909168 | MS.gene73417:CDS |
| ATCATCTGAGGAGGAGATGC+TGG | 0.385858 | 1.4:-83908128 | MS.gene73417:CDS |
| GTCGATTTGATCGATCTCTT+TGG | 0.389308 | 1.4:-83909268 | MS.gene73417:CDS |
| TTTGTTGCAGGGTGTGAGTA+AGG | 0.391370 | 1.4:-83906823 | MS.gene73417:intron |
| CTTTCGGTCGTGAGAAGAAA+AGG | 0.392381 | 1.4:-83909721 | MS.gene73417:CDS |
| ATCTGTTTCCAGTCAAAATC+AGG | 0.395840 | 1.4:+83907593 | None:intergenic |
| GTTTCTGTAAGCAACATCTA+TGG | 0.403151 | 1.4:-83909334 | MS.gene73417:CDS |
| GCACAAAGGAAAGAGGAAAA+TGG | 0.406553 | 1.4:-83909563 | MS.gene73417:CDS |
| ACATTGTTTCAGCTTATAAG+AGG | 0.408474 | 1.4:-83908035 | MS.gene73417:CDS |
| GATCATCCTCTCTTGAGAAA+TGG | 0.409237 | 1.4:+83909613 | None:intergenic |
| AAAAGGATAAACGACACATT+TGG | 0.409911 | 1.4:-83908585 | MS.gene73417:CDS |
| ATCATTAAGCGGCGCGATTC+GGG | 0.410018 | 1.4:-83908319 | MS.gene73417:CDS |
| TAAGGAACTTCTTGATCATC+TGG | 0.414096 | 1.4:-83907450 | MS.gene73417:CDS |
| TGCGTCATGAGAAGCATTAT+AGG | 0.414289 | 1.4:-83908221 | MS.gene73417:CDS |
| GATCAGATGAGGACATGTTT+GGG | 0.414515 | 1.4:-83906719 | MS.gene73417:CDS |
| CGAAAGTATGAAACCCTATA+AGG | 0.416886 | 1.4:+83909009 | None:intergenic |
| GTACGCACGATGTTGCATAT+TGG | 0.417861 | 1.4:-83908191 | MS.gene73417:CDS |
| CCAGCAACAGTTGCCACTCT+TGG | 0.421922 | 1.4:+83909695 | None:intergenic |
| TCCCAACATTCTACTGCAAC+AGG | 0.422981 | 1.4:+83908965 | None:intergenic |
| TCTGATAACAATGCAACAAA+AGG | 0.423959 | 1.4:-83906781 | MS.gene73417:CDS |
| TCCTGTTGCAGTAGAATGTT+GGG | 0.425459 | 1.4:-83908966 | MS.gene73417:CDS |
| AATGAGGGGAAAGGTTGTTC+TGG | 0.426046 | 1.4:-83908682 | MS.gene73417:CDS |
| ATCAGAACCAACACTGTTGT+TGG | 0.428130 | 1.4:+83909646 | None:intergenic |
| CCAAAGAGAGTGCTCTGGTT+TGG | 0.428765 | 1.4:-83907514 | MS.gene73417:CDS |
| TCATGCGGCTCGCCGTCTTT+CGG | 0.430507 | 1.4:-83909737 | MS.gene73417:CDS |
| AAGTAATATTTGGCTTTGCT+TGG | 0.430940 | 1.4:+83906627 | None:intergenic |
| CGGACGAAGGAAAAGGACTA+TGG | 0.431241 | 1.4:+83909090 | None:intergenic |
| GATGTTGAAACAATCTATAT+TGG | 0.433844 | 1.4:-83909476 | MS.gene73417:CDS |
| GCGTAGCTTCTTGCAGGATC+TGG | 0.434843 | 1.4:-83908166 | MS.gene73417:CDS |
| AGGATTTCGAGTAATAGCTT+TGG | 0.436633 | 1.4:-83908088 | MS.gene73417:CDS |
| ACCCAAACAAAATCCTCATC+AGG | 0.437641 | 1.4:+83909188 | None:intergenic |
| CGAATCGCGCCGCTTAATGA+TGG | 0.438856 | 1.4:+83908321 | None:intergenic |
| TTGGGCGCGTAGCTTCTTGC+AGG | 0.441346 | 1.4:-83908172 | MS.gene73417:CDS |
| TCAAATCGACCACCAAGATC+AGG | 0.444062 | 1.4:+83909281 | None:intergenic |
| AAGGTCAAACTGTGATGCTT+GGG | 0.444131 | 1.4:-83908782 | MS.gene73417:CDS |
| CAAAAGAATCGCTCGGTGCT+TGG | 0.449492 | 1.4:+83908011 | None:intergenic |
| TCACAGTTTGACCTTTGAAC+TGG | 0.450018 | 1.4:+83908790 | None:intergenic |
| AACGACACATTTGGAAGGCC+TGG | 0.452363 | 1.4:-83908576 | MS.gene73417:CDS |
| GGAAAGAGGAAAATGGTAAG+TGG | 0.457394 | 1.4:-83909556 | MS.gene73417:CDS |
| CAAGAGAGGATGATCATTGT+TGG | 0.460566 | 1.4:-83909605 | MS.gene73417:CDS |
| TGGTAACCAGCTTCCATTGA+AGG | 0.461364 | 1.4:-83909585 | MS.gene73417:CDS |
| TTACAGCTGAAAGATGGTCT+TGG | 0.463158 | 1.4:-83909503 | MS.gene73417:CDS |
| AAGACCTATGTAGCCTCGCT+TGG | 0.466700 | 1.4:+83908929 | None:intergenic |
| AGCAGTTTGTTCAGAAGCAT+TGG | 0.467175 | 1.4:+83906563 | None:intergenic |
| AGATTTAACAGGGCAAGGCT+TGG | 0.467489 | 1.4:-83909122 | MS.gene73417:CDS |
| GACAAGCCATACTGAAGAAT+GGG | 0.468184 | 1.4:-83907633 | MS.gene73417:CDS |
| CAAGGAAACACGTCCGCAAT+GGG | 0.469994 | 1.4:+83906666 | None:intergenic |
| CTACAAATGATATACTCATA+TGG | 0.471654 | 1.4:+83908438 | None:intergenic |
| CTGGTGGTGTCTGAATTCAT+TGG | 0.473518 | 1.4:-83908351 | MS.gene73417:CDS |
| ATTTGATCGATCTCTTTGGC+AGG | 0.477042 | 1.4:-83909264 | MS.gene73417:CDS |
| AAAGGTCAAACTGTGATGCT+TGG | 0.478423 | 1.4:-83908783 | MS.gene73417:CDS |
| AAACTTATGCAACCGTGAAA+AGG | 0.479354 | 1.4:-83908602 | MS.gene73417:CDS |
| CAATCCAAGCGAGGCTACAT+AGG | 0.479480 | 1.4:-83908933 | MS.gene73417:CDS |
| TTTGTGCCTTCAATGGAAGC+TGG | 0.479814 | 1.4:+83909579 | None:intergenic |
| TACATAGGTCTTGAGTACTA+TGG | 0.482799 | 1.4:-83908918 | MS.gene73417:CDS |
| CTCCTGTTGCAGTAGAATGT+TGG | 0.483716 | 1.4:-83908967 | MS.gene73417:CDS |
| TTAGAAAAGCTTGCTTAATG+AGG | 0.484009 | 1.4:+83906516 | None:intergenic |
| TATATCTCGGACGAAGGAAA+AGG | 0.486903 | 1.4:+83909083 | None:intergenic |
| GAATCGCGCCGCTTAATGAT+GGG | 0.487141 | 1.4:+83908322 | None:intergenic |
| CGATACAACACTCCAGAGTT+GGG | 0.487205 | 1.4:-83908532 | MS.gene73417:CDS |
| ATATAAGCAAAATGGCTTCA+AGG | 0.492644 | 1.4:-83909787 | None:intergenic |
| AAGCGATTCTCTCCCAACTC+TGG | 0.499258 | 1.4:+83908520 | None:intergenic |
| TGATGCTGTTGCTGAAGCTA+TGG | 0.500313 | 1.4:-83908280 | MS.gene73417:CDS |
| ATGGTAAGTGGGAATTCACT+TGG | 0.502564 | 1.4:-83909544 | MS.gene73417:CDS |
| AAGCAAAGCCAAATATTACT+TGG | 0.502945 | 1.4:-83906625 | MS.gene73417:CDS |
| CTTGTTACAGCAGTGAGAGA+TGG | 0.504181 | 1.4:-83908474 | MS.gene73417:CDS |
| GACGTGTTTCCTTGCACCGT+TGG | 0.505796 | 1.4:-83906657 | MS.gene73417:CDS |
| TGGCCTATATGAATACCAAC+AGG | 0.508722 | 1.4:+83908870 | None:intergenic |
| CATCTCTAACAGGAAGGGTT+CGG | 0.508766 | 1.4:+83909060 | None:intergenic |
| AAGATTACAGGTGTGTATCC+AGG | 0.509121 | 1.4:+83908558 | None:intergenic |
| TCGATACAACACTCCAGAGT+TGG | 0.509920 | 1.4:-83908533 | MS.gene73417:CDS |
| GGACAAGCCATACTGAAGAA+TGG | 0.510330 | 1.4:-83907634 | MS.gene73417:CDS |
| AGCTCAGGTGGAAGGAAAGT+TGG | 0.512723 | 1.4:+83909377 | None:intergenic |
| GAAAGAGATTTAACAGGGCA+AGG | 0.513388 | 1.4:-83909127 | MS.gene73417:CDS |
| CTGATAACAATGCAACAAAA+GGG | 0.514427 | 1.4:-83906780 | MS.gene73417:CDS |
| GTGGGAATTCACTTGGGATG+AGG | 0.515265 | 1.4:-83909537 | MS.gene73417:CDS |
| ATGGAAACAGCTTCAGCACT+AGG | 0.515512 | 1.4:+83907943 | None:intergenic |
| TTGTTGCAGGGTGTGAGTAA+GGG | 0.516408 | 1.4:-83906822 | MS.gene73417:intron |
| TTCTTCTCACGACCGAAAGA+CGG | 0.519257 | 1.4:+83909725 | None:intergenic |
| TTCATACTTTCGACTATGCT+AGG | 0.522500 | 1.4:-83908998 | MS.gene73417:CDS |
| CTTCTTGCAGGATCTGGAAA+GGG | 0.524177 | 1.4:-83908160 | MS.gene73417:CDS |
| CTTGACATGAACCGAAATCT+CGG | 0.524650 | 1.4:+83907474 | None:intergenic |
| GATAGTACTATGGTGCAGCC+TGG | 0.524793 | 1.4:-83907982 | MS.gene73417:CDS |
| TCATCTGAGGAGGAGATGCT+GGG | 0.527479 | 1.4:-83908127 | MS.gene73417:CDS |
| CATTGTGGAAGTTAAACCTC+AGG | 0.529575 | 1.4:-83907381 | MS.gene73417:intron |
| AGCATTAAGATTCTTCCTGT+TGG | 0.529787 | 1.4:-83908885 | MS.gene73417:CDS |
| TGAAGTAAGATCTAACAAGT+TGG | 0.532544 | 1.4:+83909757 | None:intergenic |
| GAGCCTGTTTCAGTTAAAAG+TGG | 0.534096 | 1.4:-83907410 | MS.gene73417:CDS |
| GCAAACCCTGCTAGAGGCCG+CGG | 0.535783 | 1.4:-83908651 | MS.gene73417:CDS |
| GCAAGGAAACACGTCCGCAA+TGG | 0.535831 | 1.4:+83906665 | None:intergenic |
| CCTTTCCGCGGCCTCTAGCA+GGG | 0.538093 | 1.4:+83908646 | None:intergenic |
| CCGCTGTCGCCTGATCTTGG+TGG | 0.540431 | 1.4:-83909290 | MS.gene73417:CDS |
| GGTGTTGCACTAATTGATCC+AGG | 0.542444 | 1.4:+83907964 | None:intergenic |
| TTTACAACATGCTGAAATGA+GGG | 0.544384 | 1.4:-83908697 | MS.gene73417:CDS |
| GATTCATGACTGACTCAAGC+TGG | 0.544391 | 1.4:+83908850 | None:intergenic |
| GATGACATGGATATCTTCAA+AGG | 0.545640 | 1.4:-83908756 | MS.gene73417:CDS |
| GGATTCCGCCTTAATGGTCC+CGG | 0.546381 | 1.4:-83908259 | MS.gene73417:CDS |
| GAAAGAGGAAAATGGTAAGT+GGG | 0.548871 | 1.4:-83909555 | MS.gene73417:CDS |
| TAGAATTTAGTGAAAAGCTC+AGG | 0.548984 | 1.4:+83909362 | None:intergenic |
| AGAGAAACACTCTCACTGAA+TGG | 0.549371 | 1.4:-83907864 | MS.gene73417:CDS |
| TTTCGGTTCATGTCAAGCTA+AGG | 0.551647 | 1.4:-83907468 | MS.gene73417:CDS |
| CTTGGACTTGCTGCAGAACA+CGG | 0.553602 | 1.4:-83907823 | MS.gene73417:CDS |
| GTTTAACTTCCACAATGTAT+GGG | 0.566536 | 1.4:+83907387 | None:intergenic |
| ACTGCACAAGCTGTTCAAGA+TGG | 0.567111 | 1.4:+83907924 | None:intergenic |
| TAGTGAAAAGCTCAGGTGGA+AGG | 0.568307 | 1.4:+83909369 | None:intergenic |
| CATAATCCAAAAGAATCGCT+CGG | 0.569386 | 1.4:+83908004 | None:intergenic |
| CCCTGCTAGAGGCCGCGGAA+AGG | 0.571655 | 1.4:-83908646 | MS.gene73417:CDS |
| GCTTCTTGCAGGATCTGGAA+AGG | 0.572169 | 1.4:-83908161 | MS.gene73417:CDS |
| CGTCCTCCATTTCTCAAGAG+AGG | 0.575029 | 1.4:-83909619 | MS.gene73417:CDS |
| ATTGAAGGCACAAAGGAAAG+AGG | 0.575033 | 1.4:-83909570 | MS.gene73417:CDS |
| CTCTCTTGAGAAATGGAGGA+CGG | 0.575333 | 1.4:+83909620 | None:intergenic |
| GAAGTTCATCTCTAACAGGA+AGG | 0.577715 | 1.4:+83909054 | None:intergenic |
| TTGTTAGATCTTACTTCATG+CGG | 0.579234 | 1.4:-83909752 | MS.gene73417:CDS |
| AATATTTGCTGATAAAGTGA+TGG | 0.579350 | 1.4:-83909222 | MS.gene73417:CDS |
| GGCTGCTCCCCATCATTAAG+CGG | 0.581670 | 1.4:-83908330 | MS.gene73417:CDS |
| TGCTTAATGAGGAGATAACT+GGG | 0.586765 | 1.4:+83906527 | None:intergenic |
| TTGTTACAGCAGTGAGAGAT+GGG | 0.586812 | 1.4:-83908473 | MS.gene73417:CDS |
| GCGCGATTCGGGTGAATCCG+TGG | 0.589497 | 1.4:-83908308 | MS.gene73417:CDS |
| GATGCTTGGGGTGGATGACA+TGG | 0.591172 | 1.4:-83908769 | MS.gene73417:CDS |
| AGAGTCCAAAGAGAGTGCTC+TGG | 0.593330 | 1.4:-83907519 | MS.gene73417:CDS |
| GAAGAAAAGGCTTCCAAGAG+TGG | 0.594619 | 1.4:-83909708 | MS.gene73417:CDS |
| AGGAAGGGTTCGGTATATCT+CGG | 0.595173 | 1.4:+83909070 | None:intergenic |
| TCTTTCTGAGACAGAAAGCA+AGG | 0.595405 | 1.4:-83908829 | MS.gene73417:CDS |
| CATCCTCTCTTGAGAAATGG+AGG | 0.595883 | 1.4:+83909616 | None:intergenic |
| GAGCTAAGAAACCAGTTCAA+AGG | 0.597173 | 1.4:-83908801 | MS.gene73417:CDS |
| TAAAAGTGGCCCATACATTG+TGG | 0.597276 | 1.4:-83907396 | MS.gene73417:CDS |
| AAGTTCATCTCTAACAGGAA+GGG | 0.599310 | 1.4:+83909055 | None:intergenic |
| TTGGGGTAATAACAAGTGCA+AGG | 0.603403 | 1.4:-83906701 | MS.gene73417:CDS |
| TATCCAAAAGAAGAGCATGC+TGG | 0.604070 | 1.4:-83908370 | MS.gene73417:CDS |
| CCACCAAGATCAGGCGACAG+CGG | 0.612409 | 1.4:+83909290 | None:intergenic |
| GATGAAACCAACAACAGTGT+TGG | 0.613941 | 1.4:-83909653 | MS.gene73417:CDS |
| GCAACAGCATCAATATTCCA+CGG | 0.614265 | 1.4:+83908291 | None:intergenic |
| TGGTAAGTGGGAATTCACTT+GGG | 0.618013 | 1.4:-83909543 | MS.gene73417:CDS |
| GTTCGGTATATCTCGGACGA+AGG | 0.622286 | 1.4:+83909077 | None:intergenic |
| ACATGCTGAAATGAGGGGAA+AGG | 0.622463 | 1.4:-83908691 | MS.gene73417:CDS |
| AATTTAGTGAAAAGCTCAGG+TGG | 0.623435 | 1.4:+83909365 | None:intergenic |
| GGAAGTTATCAACCCTGATG+AGG | 0.625660 | 1.4:-83909201 | MS.gene73417:CDS |
| AAACTTTAGAAAGCTATCTG+TGG | 0.628781 | 1.4:-83908061 | MS.gene73417:CDS |
| AGCTTCCATTGAAGGCACAA+AGG | 0.630490 | 1.4:-83909577 | MS.gene73417:CDS |
| AATCGCGCCGCTTAATGATG+GGG | 0.632508 | 1.4:+83908323 | None:intergenic |
| TGGGGTAATAACAAGTGCAA+GGG | 0.633008 | 1.4:-83906700 | MS.gene73417:CDS |
| TTACAACATGCTGAAATGAG+GGG | 0.634606 | 1.4:-83908696 | MS.gene73417:CDS |
| GGAAGCATGTAGTGAAACAA+AGG | 0.636066 | 1.4:+83909311 | None:intergenic |
| CTTCTTGCACATCCTTTCCG+CGG | 0.637125 | 1.4:+83908634 | None:intergenic |
| CCCAAACAAAATCCTCATCA+GGG | 0.640182 | 1.4:+83909189 | None:intergenic |
| TGGTGATGACAGATCAGATG+AGG | 0.641223 | 1.4:-83906730 | MS.gene73417:CDS |
| GAGTATATCATTTGTAGACA+AGG | 0.642548 | 1.4:-83908432 | MS.gene73417:CDS |
| GGCATCTCTATCGCCCATTG+CGG | 0.645098 | 1.4:-83906679 | MS.gene73417:CDS |
| CATCTGAGGAGGAGATGCTG+GGG | 0.645178 | 1.4:-83908126 | MS.gene73417:CDS |
| TTTGAGAAAGAGATTTAACA+GGG | 0.647753 | 1.4:-83909132 | MS.gene73417:CDS |
| CAAATCGCAAACCCTGCTAG+AGG | 0.649493 | 1.4:-83908657 | MS.gene73417:CDS |
| AATCGCTTACTATGCAATTG+CGG | 0.650771 | 1.4:-83908505 | MS.gene73417:CDS |
| ACATTCTACTGCAACAGGAG+AGG | 0.651128 | 1.4:+83908970 | None:intergenic |
| CTTGTAGAGATCATCTGAGG+AGG | 0.654064 | 1.4:-83908137 | MS.gene73417:CDS |
| GGATAAACGACACATTTGGA+AGG | 0.660498 | 1.4:-83908581 | MS.gene73417:CDS |
| TTATATACAGAAACTACTGA+TGG | 0.662521 | 1.4:-83907551 | MS.gene73417:CDS |
| CCAAAAGAAGAGCATGCTGG+TGG | 0.662803 | 1.4:-83908367 | MS.gene73417:CDS |
| AGACTCCGGGACCATTAAGG+CGG | 0.664593 | 1.4:+83908254 | None:intergenic |
| ATCAGATGAGGACATGTTTG+GGG | 0.667558 | 1.4:-83906718 | MS.gene73417:CDS |
| TCAAACTGTGATGCTTGGGG+TGG | 0.668780 | 1.4:-83908778 | MS.gene73417:CDS |
| ACGAAGGAAAAGGACTATGG+AGG | 0.674332 | 1.4:+83909093 | None:intergenic |
| GGGCTTGTAGAGATCATCTG+AGG | 0.683476 | 1.4:-83908140 | MS.gene73417:CDS |
| ATGTTGGAAGAACCATCAAG+TGG | 0.693809 | 1.4:+83909156 | None:intergenic |
| AGGTCAAACTGTGATGCTTG+GGG | 0.701625 | 1.4:-83908781 | MS.gene73417:CDS |
| ATTGCTTATCAATCCAAGCG+AGG | 0.704535 | 1.4:-83908942 | MS.gene73417:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATGATTAATAATACTA+TGG | - | chr1.4:83909352-83909371 | MS.gene73417:CDS | 15.0% |
| !! | GATCTTTAGTTAAAATAAAA+AGG | - | chr1.4:83909051-83909070 | MS.gene73417:CDS | 15.0% |
| !!! | AAATAAATTGTTTTCTTTGA+TGG | - | chr1.4:83908602-83908621 | MS.gene73417:CDS | 15.0% |
| !! | ATTAAGAAACAGACATTTAT+CGG | + | chr1.4:83909117-83909136 | None:intergenic | 20.0% |
| !! | TTGAAGTTAATTCTAATCTT+TGG | - | chr1.4:83909379-83909398 | MS.gene73417:CDS | 20.0% |
| !! | TTTGTATACTACTTATTGTT+GGG | - | chr1.4:83909021-83909040 | MS.gene73417:CDS | 20.0% |
| !!! | AAATTTATCCTTTTTTTTCC+AGG | - | chr1.4:83908651-83908670 | MS.gene73417:CDS | 20.0% |
| ! | AATCTCTTTCTCAAAAATGT+TGG | + | chr1.4:83907169-83907188 | None:intergenic | 25.0% |
| ! | AGTTCATGATCTTAGAAATA+AGG | + | chr1.4:83909428-83909447 | None:intergenic | 25.0% |
| ! | ATAAAAAGGATACTTGAATC+TGG | - | chr1.4:83909065-83909084 | MS.gene73417:CDS | 25.0% |
| ! | CTACAAATGATATACTCATA+TGG | + | chr1.4:83907871-83907890 | None:intergenic | 25.0% |
| ! | GATGTTGAAACAATCTATAT+TGG | - | chr1.4:83906830-83906849 | MS.gene73417:intron | 25.0% |
| ! | GTTTGTATACTACTTATTGT+TGG | - | chr1.4:83909020-83909039 | MS.gene73417:CDS | 25.0% |
| ! | TTATATACAGAAACTACTGA+TGG | - | chr1.4:83908755-83908774 | MS.gene73417:CDS | 25.0% |
| ! | TTTAAAAGAGTGAGTTCATT+TGG | + | chr1.4:83908555-83908574 | None:intergenic | 25.0% |
| ! | TTTGAGAAAGAGATTTAACA+GGG | - | chr1.4:83907174-83907193 | MS.gene73417:intron | 25.0% |
| ! | TTTGGATTATGATAGTACTA+TGG | - | chr1.4:83908314-83908333 | MS.gene73417:CDS | 25.0% |
| !! | AATATTTGCTGATAAAGTGA+TGG | - | chr1.4:83907084-83907103 | MS.gene73417:intron | 25.0% |
| !! | CTTTTCACTAAATTCTATCA+TGG | - | chr1.4:83906950-83906969 | MS.gene73417:intron | 25.0% |
| !!! | ACTTTTTTATTACTAACCTG+AGG | + | chr1.4:83908944-83908963 | None:intergenic | 25.0% |
| !!! | TTTTGAGAAAGAGATTTAAC+AGG | - | chr1.4:83907173-83907192 | MS.gene73417:intron | 25.0% |
| AAAAGGATAAACGACACATT+TGG | - | chr1.4:83907721-83907740 | MS.gene73417:intron | 30.0% | |
| AAGCAAAGCCAAATATTACT+TGG | - | chr1.4:83909681-83909700 | MS.gene73417:CDS | 30.0% | |
| ACATTGTTTCAGCTTATAAG+AGG | - | chr1.4:83908271-83908290 | MS.gene73417:CDS | 30.0% | |
| CACAATGAAAACACAATTCT+TGG | + | chr1.4:83908412-83908431 | None:intergenic | 30.0% | |
| CTGATAACAATGCAACAAAA+GGG | - | chr1.4:83909526-83909545 | MS.gene73417:CDS | 30.0% | |
| GAGTATATCATTTGTAGACA+AGG | - | chr1.4:83907874-83907893 | MS.gene73417:CDS | 30.0% | |
| TAGAATTTAGTGAAAAGCTC+AGG | + | chr1.4:83906947-83906966 | None:intergenic | 30.0% | |
| TCATGATCTTAGAAATAAGG+AGG | + | chr1.4:83909425-83909444 | None:intergenic | 30.0% | |
| TCGTAGATCAAAGAAAATAG+CGG | + | chr1.4:83909302-83909321 | None:intergenic | 30.0% | |
| TCTGATAACAATGCAACAAA+AGG | - | chr1.4:83909525-83909544 | MS.gene73417:CDS | 30.0% | |
| TCTGTATATAACTGCATAAC+TGG | + | chr1.4:83908746-83908765 | None:intergenic | 30.0% | |
| TGAAGTAAGATCTAACAAGT+TGG | + | chr1.4:83906552-83906571 | None:intergenic | 30.0% | |
| TGTGTCTTCCAAGTAATATT+TGG | + | chr1.4:83909692-83909711 | None:intergenic | 30.0% | |
| TTATGCATGAAAGAATGTTG+TGG | - | chr1.4:83908576-83908595 | MS.gene73417:CDS | 30.0% | |
| TTCTGAATTCTGACCTTATA+GGG | - | chr1.4:83907284-83907303 | MS.gene73417:intron | 30.0% | |
| TTGTTAGATCTTACTTCATG+CGG | - | chr1.4:83906554-83906573 | MS.gene73417:CDS | 30.0% | |
| TTTACAACATGCTGAAATGA+GGG | - | chr1.4:83907609-83907628 | MS.gene73417:CDS | 30.0% | |
| ! | AAACTTTAGAAAGCTATCTG+TGG | - | chr1.4:83908245-83908264 | MS.gene73417:CDS | 30.0% |
| ! | AATTGTGTTTTCATTGTGAG+TGG | - | chr1.4:83908414-83908433 | MS.gene73417:CDS | 30.0% |
| ! | AGGAATCAGCTTAAAACTTT+TGG | - | chr1.4:83907570-83907589 | MS.gene73417:CDS | 30.0% |
| ! | GAGAAGATAGATGAGATTTT+AGG | - | chr1.4:83907901-83907920 | MS.gene73417:CDS | 30.0% |
| ! | GTTTAACTTCCACAATGTAT+GGG | + | chr1.4:83908922-83908941 | None:intergenic | 30.0% |
| ! | TGGTCATGAATTCTTTTGAA+GGG | - | chr1.4:83909399-83909418 | MS.gene73417:CDS | 30.0% |
| ! | TTGGTCATGAATTCTTTTGA+AGG | - | chr1.4:83909398-83909417 | MS.gene73417:CDS | 30.0% |
| ! | TTTTACAACATGCTGAAATG+AGG | - | chr1.4:83907608-83907627 | MS.gene73417:CDS | 30.0% |
| ! | TTTTCTTCTTGTGAAAAGCT+TGG | - | chr1.4:83908465-83908484 | MS.gene73417:CDS | 30.0% |
| !! | AAGTAATATTTGGCTTTGCT+TGG | + | chr1.4:83909682-83909701 | None:intergenic | 30.0% |
| !! | ACAGATAGCTTTCTAAAGTT+TGG | + | chr1.4:83908246-83908265 | None:intergenic | 30.0% |
| !! | CAGATAGCTTTCTAAAGTTT+GGG | + | chr1.4:83908245-83908264 | None:intergenic | 30.0% |
| AAACTTATGCAACCGTGAAA+AGG | - | chr1.4:83907704-83907723 | MS.gene73417:intron | 35.0% | |
| AAGTTCATCTCTAACAGGAA+GGG | + | chr1.4:83907254-83907273 | None:intergenic | 35.0% | |
| AATCGCTTACTATGCAATTG+CGG | - | chr1.4:83907801-83907820 | MS.gene73417:intron | 35.0% | |
| AATTTAGTGAAAAGCTCAGG+TGG | + | chr1.4:83906944-83906963 | None:intergenic | 35.0% | |
| AGCATTAAGATTCTTCCTGT+TGG | - | chr1.4:83907421-83907440 | MS.gene73417:CDS | 35.0% | |
| ATCTGTTTCCAGTCAAAATC+AGG | + | chr1.4:83908716-83908735 | None:intergenic | 35.0% | |
| CATAATCCAAAAGAATCGCT+CGG | + | chr1.4:83908305-83908324 | None:intergenic | 35.0% | |
| CCAATGCATAGAACAAAATC+TGG | + | chr1.4:83909559-83909578 | None:intergenic | 35.0% | |
| CTAAGAAGTTCATCTCTAAC+AGG | + | chr1.4:83907259-83907278 | None:intergenic | 35.0% | |
| CTTCCTGTTGGTATTCATAT+AGG | - | chr1.4:83907433-83907452 | MS.gene73417:CDS | 35.0% | |
| CTTCTGAATTCTGACCTTAT+AGG | - | chr1.4:83907283-83907302 | MS.gene73417:intron | 35.0% | |
| GAAAGAGGAAAATGGTAAGT+GGG | - | chr1.4:83906751-83906770 | MS.gene73417:CDS | 35.0% | |
| GAGTGAGTTCATTTGGTATA+AGG | + | chr1.4:83908548-83908567 | None:intergenic | 35.0% | |
| GATGACATGGATATCTTCAA+AGG | - | chr1.4:83907550-83907569 | MS.gene73417:CDS | 35.0% | |
| GTTTCTGTAAGCAACATCTA+TGG | - | chr1.4:83906972-83906991 | MS.gene73417:intron | 35.0% | |
| TAAGGAACTTCTTGATCATC+TGG | - | chr1.4:83908856-83908875 | MS.gene73417:CDS | 35.0% | |
| TACATAGGTCTTGAGTACTA+TGG | - | chr1.4:83907388-83907407 | MS.gene73417:CDS | 35.0% | |
| TTACAACATGCTGAAATGAG+GGG | - | chr1.4:83907610-83907629 | MS.gene73417:CDS | 35.0% | |
| TTCATACTTTCGACTATGCT+AGG | - | chr1.4:83907308-83907327 | MS.gene73417:intron | 35.0% | |
| TTCTTTGATGGAGATTGCTT+AGG | - | chr1.4:83908614-83908633 | MS.gene73417:CDS | 35.0% | |
| ! | AGGATTTCGAGTAATAGCTT+TGG | - | chr1.4:83908218-83908237 | MS.gene73417:CDS | 35.0% |
| ! | CACTTGACATTTTTGTTGCA+GGG | - | chr1.4:83909472-83909491 | MS.gene73417:CDS | 35.0% |
| ! | CAGCTTAAAACTTTTGGCAA+TGG | - | chr1.4:83907576-83907595 | MS.gene73417:CDS | 35.0% |
| ! | CCAGATTTTGTTCTATGCAT+TGG | - | chr1.4:83909556-83909575 | MS.gene73417:CDS | 35.0% |
| ! | CGAAAGTATGAAACCCTATA+AGG | + | chr1.4:83907300-83907319 | None:intergenic | 35.0% |
| ! | CTTCTTTTACAGCTGAAAGA+TGG | - | chr1.4:83906797-83906816 | MS.gene73417:CDS | 35.0% |
| ! | GGTTTAACTTCCACAATGTA+TGG | + | chr1.4:83908923-83908942 | None:intergenic | 35.0% |
| ! | GTTGTATCGATCAAGATTAC+AGG | + | chr1.4:83907763-83907782 | None:intergenic | 35.0% |
| ! | TGTTTTCATTGTGAGTGGAA+AGG | - | chr1.4:83908419-83908438 | MS.gene73417:CDS | 35.0% |
| !! | TTTGCTTGGTTTTTGACCAA+CGG | + | chr1.4:83909668-83909687 | None:intergenic | 35.0% |
| !!! | TGTGTCGTTTATCCTTTTCA+CGG | + | chr1.4:83907719-83907738 | None:intergenic | 35.0% |
| AAAGGTCAAACTGTGATGCT+TGG | - | chr1.4:83907523-83907542 | MS.gene73417:CDS | 40.0% | |
| AAGATTACAGGTGTGTATCC+AGG | + | chr1.4:83907751-83907770 | None:intergenic | 40.0% | |
| AAGCTTCCCATTCTTCAGTA+TGG | + | chr1.4:83908682-83908701 | None:intergenic | 40.0% | |
| AAGGTCAAACTGTGATGCTT+GGG | - | chr1.4:83907524-83907543 | MS.gene73417:CDS | 40.0% | |
| ACCCAAACAAAATCCTCATC+AGG | + | chr1.4:83907121-83907140 | None:intergenic | 40.0% | |
| AGAGAAACACTCTCACTGAA+TGG | - | chr1.4:83908442-83908461 | MS.gene73417:CDS | 40.0% | |
| AGATCAGATGAGGACATGTT+TGG | - | chr1.4:83909586-83909605 | MS.gene73417:CDS | 40.0% | |
| ATCAGAACCAACACTGTTGT+TGG | + | chr1.4:83906663-83906682 | None:intergenic | 40.0% | |
| ATCAGATGAGGACATGTTTG+GGG | - | chr1.4:83909588-83909607 | MS.gene73417:CDS | 40.0% | |
| ATGGTAAGTGGGAATTCACT+TGG | - | chr1.4:83906762-83906781 | MS.gene73417:CDS | 40.0% | |
| ATGTTGGAAGAACCATCAAG+TGG | + | chr1.4:83907153-83907172 | None:intergenic | 40.0% | |
| ATTGCTTATCAATCCAAGCG+AGG | - | chr1.4:83907364-83907383 | MS.gene73417:intron | 40.0% | |
| ATTTGATCGATCTCTTTGGC+AGG | - | chr1.4:83907042-83907061 | MS.gene73417:intron | 40.0% | |
| CAAGAGAGGATGATCATTGT+TGG | - | chr1.4:83906701-83906720 | MS.gene73417:CDS | 40.0% | |
| CATTGTGGAAGTTAAACCTC+AGG | - | chr1.4:83908925-83908944 | MS.gene73417:CDS | 40.0% | |
| CCCAAACAAAATCCTCATCA+GGG | + | chr1.4:83907120-83907139 | None:intergenic | 40.0% | |
| CCTGCAACAAAAATGTCAAG+TGG | + | chr1.4:83909474-83909493 | None:intergenic | 40.0% | |
| CTTGACATGAACCGAAATCT+CGG | + | chr1.4:83908835-83908854 | None:intergenic | 40.0% | |
| GAAAGAGATTTAACAGGGCA+AGG | - | chr1.4:83907179-83907198 | MS.gene73417:intron | 40.0% | |
| GAAGTTCATCTCTAACAGGA+AGG | + | chr1.4:83907255-83907274 | None:intergenic | 40.0% | |
| GAATTTGCAGACCGAGATTT+CGG | - | chr1.4:83908821-83908840 | MS.gene73417:CDS | 40.0% | |
| GACAAGCCATACTGAAGAAT+GGG | - | chr1.4:83908673-83908692 | MS.gene73417:CDS | 40.0% | |
| GAGCCTGTTTCAGTTAAAAG+TGG | - | chr1.4:83908896-83908915 | MS.gene73417:CDS | 40.0% | |
| GAGCTAAGAAACCAGTTCAA+AGG | - | chr1.4:83907505-83907524 | MS.gene73417:CDS | 40.0% | |
| GATCAGATGAGGACATGTTT+GGG | - | chr1.4:83909587-83909606 | MS.gene73417:CDS | 40.0% | |
| GATCATCCTCTCTTGAGAAA+TGG | + | chr1.4:83906696-83906715 | None:intergenic | 40.0% | |
| GATGAAACCAACAACAGTGT+TGG | - | chr1.4:83906653-83906672 | MS.gene73417:CDS | 40.0% | |
| GCAACAGCATCAATATTCCA+CGG | + | chr1.4:83908018-83908037 | None:intergenic | 40.0% | |
| GCAACATCATCTTGCTCAAT+TGG | + | chr1.4:83906878-83906897 | None:intergenic | 40.0% | |
| GCACAAAGGAAAGAGGAAAA+TGG | - | chr1.4:83906743-83906762 | MS.gene73417:CDS | 40.0% | |
| GGAAAGAGGAAAATGGTAAG+TGG | - | chr1.4:83906750-83906769 | MS.gene73417:CDS | 40.0% | |
| GGATAAACGACACATTTGGA+AGG | - | chr1.4:83907725-83907744 | MS.gene73417:intron | 40.0% | |
| TAAAAGTGGCCCATACATTG+TGG | - | chr1.4:83908910-83908929 | MS.gene73417:CDS | 40.0% | |
| TACGCACGATGTTGCATATT+GGG | - | chr1.4:83908116-83908135 | MS.gene73417:CDS | 40.0% | |
| TATATCTCGGACGAAGGAAA+AGG | + | chr1.4:83907226-83907245 | None:intergenic | 40.0% | |
| TCACAGTTTGACCTTTGAAC+TGG | + | chr1.4:83907519-83907538 | None:intergenic | 40.0% | |
| TCCTGTTGCAGTAGAATGTT+GGG | - | chr1.4:83907340-83907359 | MS.gene73417:intron | 40.0% | |
| TCTTTCCTTTGTGCCTTCAA+TGG | + | chr1.4:83906737-83906756 | None:intergenic | 40.0% | |
| TGATCTACGATTGACAACAC+TGG | - | chr1.4:83909312-83909331 | MS.gene73417:CDS | 40.0% | |
| TGGCCTATATGAATACCAAC+AGG | + | chr1.4:83907439-83907458 | None:intergenic | 40.0% | |
| TGGGGTAATAACAAGTGCAA+GGG | - | chr1.4:83909606-83909625 | MS.gene73417:CDS | 40.0% | |
| TGGTAAGTGGGAATTCACTT+GGG | - | chr1.4:83906763-83906782 | MS.gene73417:CDS | 40.0% | |
| TTACAGCTGAAAGATGGTCT+TGG | - | chr1.4:83906803-83906822 | MS.gene73417:CDS | 40.0% | |
| TTGGGGTAATAACAAGTGCA+AGG | - | chr1.4:83909605-83909624 | MS.gene73417:CDS | 40.0% | |
| TTGTTACAGCAGTGAGAGAT+GGG | - | chr1.4:83907833-83907852 | MS.gene73417:CDS | 40.0% | |
| TTTCGGTTCATGTCAAGCTA+AGG | - | chr1.4:83908838-83908857 | MS.gene73417:CDS | 40.0% | |
| ! | AAGACACAAGCGAGATTTTG+AGG | - | chr1.4:83909704-83909723 | MS.gene73417:CDS | 40.0% |
| ! | ACCCTGATGAGGATTTTGTT+TGG | - | chr1.4:83907116-83907135 | MS.gene73417:intron | 40.0% |
| ! | AGCAGTTTGTTCAGAAGCAT+TGG | + | chr1.4:83909746-83909765 | None:intergenic | 40.0% |
| ! | ATTGAAGGCACAAAGGAAAG+AGG | - | chr1.4:83906736-83906755 | MS.gene73417:CDS | 40.0% |
| ! | CCACTTGACATTTTTGTTGC+AGG | - | chr1.4:83909471-83909490 | MS.gene73417:CDS | 40.0% |
| ! | GGAAGCATGTAGTGAAACAA+AGG | + | chr1.4:83906998-83907017 | None:intergenic | 40.0% |
| ! | GGTATAAGGAGTATGACACA+AGG | + | chr1.4:83908534-83908553 | None:intergenic | 40.0% |
| ! | TATCCAAAAGAAGAGCATGC+TGG | - | chr1.4:83907936-83907955 | MS.gene73417:CDS | 40.0% |
| ! | TGGCTTGTCCTGGAAAAAAA+AGG | + | chr1.4:83908662-83908681 | None:intergenic | 40.0% |
| !! | CCCTGATGAGGATTTTGTTT+GGG | - | chr1.4:83907117-83907136 | MS.gene73417:intron | 40.0% |
| !! | CGCATATGTTTTTCAGACTC+CGG | + | chr1.4:83908069-83908088 | None:intergenic | 40.0% |
| !! | GAGATTTTGAGGATGTTGCA+AGG | - | chr1.4:83909715-83909734 | MS.gene73417:CDS | 40.0% |
| !! | GCATATGTTTTTCAGACTCC+GGG | + | chr1.4:83908068-83908087 | None:intergenic | 40.0% |
| !! | GTCGATTTGATCGATCTCTT+TGG | - | chr1.4:83907038-83907057 | MS.gene73417:intron | 40.0% |
| !! | TCTTTCTGAGACAGAAAGCA+AGG | - | chr1.4:83907477-83907496 | MS.gene73417:CDS | 40.0% |
| !! | TGCGTCATGAGAAGCATTAT+AGG | - | chr1.4:83908085-83908104 | MS.gene73417:CDS | 40.0% |
| !! | TTTCTGTGCCTGATTTTGAC+TGG | - | chr1.4:83908705-83908724 | MS.gene73417:CDS | 40.0% |
| !!! | TGGGGAATTGGTTTTGGTTT+AGG | - | chr1.4:83908198-83908217 | MS.gene73417:CDS | 40.0% |
| AATGAGGGGAAAGGTTGTTC+TGG | - | chr1.4:83907624-83907643 | MS.gene73417:CDS | 45.0% | |
| ACATGCTGAAATGAGGGGAA+AGG | - | chr1.4:83907615-83907634 | MS.gene73417:CDS | 45.0% | |
| ACATTCTACTGCAACAGGAG+AGG | + | chr1.4:83907339-83907358 | None:intergenic | 45.0% | |
| ACGAAGGAAAAGGACTATGG+AGG | + | chr1.4:83907216-83907235 | None:intergenic | 45.0% | |
| ACTGCACAAGCTGTTCAAGA+TGG | + | chr1.4:83908385-83908404 | None:intergenic | 45.0% | |
| AGAACCATGTTACGCTAGCA+TGG | - | chr1.4:83909091-83909110 | MS.gene73417:CDS | 45.0% | |
| AGATTTAACAGGGCAAGGCT+TGG | - | chr1.4:83907184-83907203 | MS.gene73417:intron | 45.0% | |
| AGCTATGGATTCCGCCTTAA+TGG | - | chr1.4:83908041-83908060 | MS.gene73417:CDS | 45.0% | |
| AGGTCAAACTGTGATGCTTG+GGG | - | chr1.4:83907525-83907544 | MS.gene73417:CDS | 45.0% | |
| ATAGTAGCGCTACAACGTAG+TGG | - | chr1.4:83909163-83909182 | MS.gene73417:CDS | 45.0% | |
| ATGGAAACAGCTTCAGCACT+AGG | + | chr1.4:83908366-83908385 | None:intergenic | 45.0% | |
| CATCCTCTCTTGAGAAATGG+AGG | + | chr1.4:83906693-83906712 | None:intergenic | 45.0% | |
| CATCTCTAACAGGAAGGGTT+CGG | + | chr1.4:83907249-83907268 | None:intergenic | 45.0% | |
| CGATACAACACTCCAGAGTT+GGG | - | chr1.4:83907774-83907793 | MS.gene73417:intron | 45.0% | |
| CTCCTGTTGCAGTAGAATGT+TGG | - | chr1.4:83907339-83907358 | MS.gene73417:intron | 45.0% | |
| CTCTCTTGAGAAATGGAGGA+CGG | + | chr1.4:83906689-83906708 | None:intergenic | 45.0% | |
| CTTCTTGCAGGATCTGGAAA+GGG | - | chr1.4:83908146-83908165 | MS.gene73417:CDS | 45.0% | |
| CTTGTAGAGATCATCTGAGG+AGG | - | chr1.4:83908169-83908188 | MS.gene73417:CDS | 45.0% | |
| CTTGTTACAGCAGTGAGAGA+TGG | - | chr1.4:83907832-83907851 | MS.gene73417:CDS | 45.0% | |
| CTTTCGGTCGTGAGAAGAAA+AGG | - | chr1.4:83906585-83906604 | MS.gene73417:CDS | 45.0% | |
| GAAGAAAAGGCTTCCAAGAG+TGG | - | chr1.4:83906598-83906617 | MS.gene73417:CDS | 45.0% | |
| GGAAGTTATCAACCCTGATG+AGG | - | chr1.4:83907105-83907124 | MS.gene73417:intron | 45.0% | |
| GGACAAGCCATACTGAAGAA+TGG | - | chr1.4:83908672-83908691 | MS.gene73417:CDS | 45.0% | |
| GGTTCATGACTACCACTTGA+TGG | - | chr1.4:83907138-83907157 | MS.gene73417:intron | 45.0% | |
| GTACGCACGATGTTGCATAT+TGG | - | chr1.4:83908115-83908134 | MS.gene73417:CDS | 45.0% | |
| TAGTGAAAAGCTCAGGTGGA+AGG | + | chr1.4:83906940-83906959 | None:intergenic | 45.0% | |
| TCAAATCGACCACCAAGATC+AGG | + | chr1.4:83907028-83907047 | None:intergenic | 45.0% | |
| TCCCAACATTCTACTGCAAC+AGG | + | chr1.4:83907344-83907363 | None:intergenic | 45.0% | |
| TCGATACAACACTCCAGAGT+TGG | - | chr1.4:83907773-83907792 | MS.gene73417:intron | 45.0% | |
| TGATGCTGTTGCTGAAGCTA+TGG | - | chr1.4:83908026-83908045 | MS.gene73417:CDS | 45.0% | |
| TGCTAGCGTAACATGGTTCT+AGG | + | chr1.4:83909091-83909110 | None:intergenic | 45.0% | |
| TGGTAACCAGCTTCCATTGA+AGG | - | chr1.4:83906721-83906740 | MS.gene73417:CDS | 45.0% | |
| TTCTTCTCACGACCGAAAGA+CGG | + | chr1.4:83906584-83906603 | None:intergenic | 45.0% | |
| TTGTTGCAGGGTGTGAGTAA+GGG | - | chr1.4:83909484-83909503 | MS.gene73417:CDS | 45.0% | |
| TTTGTGCCTTCAATGGAAGC+TGG | + | chr1.4:83906730-83906749 | None:intergenic | 45.0% | |
| TTTGTTGCAGGGTGTGAGTA+AGG | - | chr1.4:83909483-83909502 | MS.gene73417:CDS | 45.0% | |
| ! | AGCTTCCATTGAAGGCACAA+AGG | - | chr1.4:83906729-83906748 | MS.gene73417:CDS | 45.0% |
| ! | AGGAAGGGTTCGGTATATCT+CGG | + | chr1.4:83907239-83907258 | None:intergenic | 45.0% |
| ! | CTGGTGGTGTCTGAATTCAT+TGG | - | chr1.4:83907955-83907974 | MS.gene73417:CDS | 45.0% |
| ! | GATTCATGACTGACTCAAGC+TGG | + | chr1.4:83907459-83907478 | None:intergenic | 45.0% |
| ! | GGTGTTGCACTAATTGATCC+AGG | + | chr1.4:83908345-83908364 | None:intergenic | 45.0% |
| ! | TGGTGATGACAGATCAGATG+AGG | - | chr1.4:83909576-83909595 | MS.gene73417:CDS | 45.0% |
| ! | TTCTTCAGTATGGCTTGTCC+TGG | + | chr1.4:83908672-83908691 | None:intergenic | 45.0% |
| !! | AGATGCTGGGGAATTGGTTT+TGG | - | chr1.4:83908192-83908211 | MS.gene73417:CDS | 45.0% |
| !! | CAACACTGGCTTGAAGTAGT+TGG | - | chr1.4:83909326-83909345 | MS.gene73417:CDS | 45.0% |
| !!! | GGGCCACTTTTAACTGAAAC+AGG | + | chr1.4:83908902-83908921 | None:intergenic | 45.0% |
| AACGACACATTTGGAAGGCC+TGG | - | chr1.4:83907730-83907749 | MS.gene73417:intron | 50.0% | |
| AAGACCTATGTAGCCTCGCT+TGG | + | chr1.4:83907380-83907399 | None:intergenic | 50.0% | |
| AAGCGATTCTCTCCCAACTC+TGG | + | chr1.4:83907789-83907808 | None:intergenic | 50.0% | |
| AATCGCGCCGCTTAATGATG+GGG | + | chr1.4:83907986-83908005 | None:intergenic | 50.0% | |
| AGCTCAGGTGGAAGGAAAGT+TGG | + | chr1.4:83906932-83906951 | None:intergenic | 50.0% | |
| ATCATCTGAGGAGGAGATGC+TGG | - | chr1.4:83908178-83908197 | MS.gene73417:CDS | 50.0% | |
| ATCATTAAGCGGCGCGATTC+GGG | - | chr1.4:83907987-83908006 | MS.gene73417:CDS | 50.0% | |
| CAAATCGCAAACCCTGCTAG+AGG | - | chr1.4:83907649-83907668 | MS.gene73417:intron | 50.0% | |
| CAAGGAAACACGTCCGCAAT+GGG | + | chr1.4:83909643-83909662 | None:intergenic | 50.0% | |
| CAATCCAAGCGAGGCTACAT+AGG | - | chr1.4:83907373-83907392 | MS.gene73417:intron | 50.0% | |
| CATCATTAAGCGGCGCGATT+CGG | - | chr1.4:83907986-83908005 | MS.gene73417:CDS | 50.0% | |
| CGGACGAAGGAAAAGGACTA+TGG | + | chr1.4:83907219-83907238 | None:intergenic | 50.0% | |
| CGTCCTCCATTTCTCAAGAG+AGG | - | chr1.4:83906687-83906706 | MS.gene73417:CDS | 50.0% | |
| CTTCTTGCACATCCTTTCCG+CGG | + | chr1.4:83907675-83907694 | None:intergenic | 50.0% | |
| GAATCGCGCCGCTTAATGAT+GGG | + | chr1.4:83907987-83908006 | None:intergenic | 50.0% | |
| GATAGTACTATGGTGCAGCC+TGG | - | chr1.4:83908324-83908343 | MS.gene73417:CDS | 50.0% | |
| GCTTCTTGCAGGATCTGGAA+AGG | - | chr1.4:83908145-83908164 | MS.gene73417:CDS | 50.0% | |
| GGGCTTGTAGAGATCATCTG+AGG | - | chr1.4:83908166-83908185 | MS.gene73417:CDS | 50.0% | |
| GTGGGAATTCACTTGGGATG+AGG | - | chr1.4:83906769-83906788 | MS.gene73417:CDS | 50.0% | |
| GTTCGGTATATCTCGGACGA+AGG | + | chr1.4:83907232-83907251 | None:intergenic | 50.0% | |
| TCAAACTGTGATGCTTGGGG+TGG | - | chr1.4:83907528-83907547 | MS.gene73417:CDS | 50.0% | |
| TCATCTGAGGAGGAGATGCT+GGG | - | chr1.4:83908179-83908198 | MS.gene73417:CDS | 50.0% | |
| TTCAGACTCCGGGACCATTA+AGG | + | chr1.4:83908058-83908077 | None:intergenic | 50.0% | |
| ! | CCAAAAGAAGAGCATGCTGG+TGG | - | chr1.4:83907939-83907958 | MS.gene73417:CDS | 50.0% |
| ! | CCAAACCAGAGCACTCTCTT+TGG | + | chr1.4:83908795-83908814 | None:intergenic | 50.0% |
| ! | CCACCAGCATGCTCTTCTTT+TGG | + | chr1.4:83907942-83907961 | None:intergenic | 50.0% |
| ! | GGTTTTTGACCAACGGTGCA+AGG | + | chr1.4:83909661-83909680 | None:intergenic | 50.0% |
| !! | AGAGTCCAAAGAGAGTGCTC+TGG | - | chr1.4:83908787-83908806 | MS.gene73417:CDS | 50.0% |
| !! | CAAAAGAATCGCTCGGTGCT+TGG | + | chr1.4:83908298-83908317 | None:intergenic | 50.0% |
| !! | CCAAAGAGAGTGCTCTGGTT+TGG | - | chr1.4:83908792-83908811 | MS.gene73417:CDS | 50.0% |
| !! | CTTGGACTTGCTGCAGAACA+CGG | - | chr1.4:83908483-83908502 | MS.gene73417:CDS | 50.0% |
| !!! | CAAGCACCGAGCGATTCTTT+TGG | - | chr1.4:83908296-83908315 | MS.gene73417:CDS | 50.0% |
| AGACTCCGGGACCATTAAGG+CGG | + | chr1.4:83908055-83908074 | None:intergenic | 55.0% | |
| AGGAGGAGATGCTGGGGAAT+TGG | - | chr1.4:83908186-83908205 | MS.gene73417:CDS | 55.0% | |
| CATCTGAGGAGGAGATGCTG+GGG | - | chr1.4:83908180-83908199 | MS.gene73417:CDS | 55.0% | |
| CCAAGAGTGGCAACTGTTGC+TGG | - | chr1.4:83906611-83906630 | MS.gene73417:CDS | 55.0% | |
| CCAGCAACAGTTGCCACTCT+TGG | + | chr1.4:83906614-83906633 | None:intergenic | 55.0% | |
| CGAATCGCGCCGCTTAATGA+TGG | + | chr1.4:83907988-83908007 | None:intergenic | 55.0% | |
| GACGTGTTTCCTTGCACCGT+TGG | - | chr1.4:83909649-83909668 | MS.gene73417:CDS | 55.0% | |
| GATGCTTGGGGTGGATGACA+TGG | - | chr1.4:83907537-83907556 | MS.gene73417:CDS | 55.0% | |
| GCAAGGAAACACGTCCGCAA+TGG | + | chr1.4:83909644-83909663 | None:intergenic | 55.0% | |
| GCGTAGCTTCTTGCAGGATC+TGG | - | chr1.4:83908140-83908159 | MS.gene73417:CDS | 55.0% | |
| GGATTCCGCCTTAATGGTCC+CGG | - | chr1.4:83908047-83908066 | MS.gene73417:CDS | 55.0% | |
| GGCATCTCTATCGCCCATTG+CGG | - | chr1.4:83909627-83909646 | MS.gene73417:CDS | 55.0% | |
| GGCTGCTCCCCATCATTAAG+CGG | - | chr1.4:83907976-83907995 | MS.gene73417:CDS | 55.0% | |
| TCGGCCATGCTAGCGTAACA+TGG | + | chr1.4:83909098-83909117 | None:intergenic | 55.0% | |
| CCACCAAGATCAGGCGACAG+CGG | + | chr1.4:83907019-83907038 | None:intergenic | 60.0% | |
| CTTCCGCTGTCGCCTGATCT+TGG | - | chr1.4:83907013-83907032 | MS.gene73417:intron | 60.0% | |
| TCATGCGGCTCGCCGTCTTT+CGG | - | chr1.4:83906569-83906588 | MS.gene73417:CDS | 60.0% | |
| TTGGGCGCGTAGCTTCTTGC+AGG | - | chr1.4:83908134-83908153 | MS.gene73417:CDS | 60.0% | |
| CCGCTGTCGCCTGATCTTGG+TGG | - | chr1.4:83907016-83907035 | MS.gene73417:intron | 65.0% | |
| CCTTTCCGCGGCCTCTAGCA+GGG | + | chr1.4:83907663-83907682 | None:intergenic | 65.0% | |
| GCAAACCCTGCTAGAGGCCG+CGG | - | chr1.4:83907655-83907674 | MS.gene73417:intron | 65.0% | |
| TCCTTTCCGCGGCCTCTAGC+AGG | + | chr1.4:83907664-83907683 | None:intergenic | 65.0% | |
| ! | GCGCGATTCGGGTGAATCCG+TGG | - | chr1.4:83907998-83908017 | MS.gene73417:CDS | 65.0% |
| CCCTGCTAGAGGCCGCGGAA+AGG | - | chr1.4:83907660-83907679 | MS.gene73417:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 83906530 | 83909798 | 83906530 | ID=MS.gene73417 |
| chr1.4 | mRNA | 83906530 | 83909798 | 83906530 | ID=MS.gene73417.t1;Parent=MS.gene73417 |
| chr1.4 | exon | 83907811 | 83909798 | 83907811 | ID=MS.gene73417.t1.exon1;Parent=MS.gene73417.t1 |
| chr1.4 | CDS | 83907811 | 83909798 | 83907811 | ID=cds.MS.gene73417.t1;Parent=MS.gene73417.t1 |
| chr1.4 | exon | 83907382 | 83907655 | 83907382 | ID=MS.gene73417.t1.exon2;Parent=MS.gene73417.t1 |
| chr1.4 | CDS | 83907382 | 83907655 | 83907382 | ID=cds.MS.gene73417.t1;Parent=MS.gene73417.t1 |
| chr1.4 | exon | 83906530 | 83906835 | 83906530 | ID=MS.gene73417.t1.exon3;Parent=MS.gene73417.t1 |
| chr1.4 | CDS | 83906530 | 83906835 | 83906530 | ID=cds.MS.gene73417.t1;Parent=MS.gene73417.t1 |
| Gene Sequence |
| Protein sequence |
