Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75183.t1 | XP_013470155.1 | 99.2 | 854 | 7 | 0 | 1 | 854 | 1 | 854 | 0.00E+00 | 1716 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75183.t1 | O23617 | 77.4 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0e+00 | 1370.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75183.t1 | A0A072VRW8 | 99.2 | 854 | 7 | 0 | 1 | 854 | 1 | 854 | 0.0e+00 | 1716.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75183 | MS.gene031592 | PPI |
| MS.gene95835 | MS.gene75183 | PPI |
| MS.gene012447 | MS.gene75183 | PPI |
| MS.gene62674 | MS.gene75183 | PPI |
| MS.gene035660 | MS.gene75183 | PPI |
| MS.gene75183 | MS.gene006702 | PPI |
| MS.gene018379 | MS.gene75183 | PPI |
| MS.gene038603 | MS.gene75183 | PPI |
| MS.gene83030 | MS.gene75183 | PPI |
| MS.gene75183 | MS.gene015639 | PPI |
| MS.gene75183 | MS.gene71003 | PPI |
| MS.gene57938 | MS.gene75183 | PPI |
| MS.gene75183 | MS.gene026499 | PPI |
| MS.gene009143 | MS.gene75183 | PPI |
| MS.gene75183 | MS.gene95324 | PPI |
| MS.gene045478 | MS.gene75183 | PPI |
| MS.gene75183 | MS.gene040931 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75183.t1 | MTR_1g109620 | 99.180 | 854 | 7 | 0 | 1 | 854 | 1 | 854 | 0.0 | 1766 |
| MS.gene75183.t1 | MTR_8g105740 | 72.824 | 850 | 223 | 5 | 1 | 843 | 1 | 849 | 0.0 | 1312 |
| MS.gene75183.t1 | MTR_1g032730 | 72.535 | 852 | 224 | 6 | 1 | 843 | 1 | 851 | 0.0 | 1300 |
| MS.gene75183.t1 | MTR_4g080160 | 64.947 | 853 | 288 | 3 | 1 | 844 | 1 | 851 | 0.0 | 1204 |
| MS.gene75183.t1 | MTR_8g063790 | 66.982 | 845 | 271 | 2 | 1 | 843 | 1 | 839 | 0.0 | 1182 |
| MS.gene75183.t1 | MTR_4g129270 | 60.050 | 801 | 310 | 7 | 52 | 846 | 47 | 843 | 0.0 | 1003 |
| MS.gene75183.t1 | MTR_4g129270 | 57.784 | 758 | 311 | 6 | 1 | 754 | 1 | 753 | 0.0 | 902 |
| MS.gene75183.t1 | MTR_3g078210 | 53.766 | 770 | 353 | 2 | 83 | 850 | 3 | 771 | 0.0 | 845 |
| MS.gene75183.t1 | MTR_3g467030 | 49.082 | 599 | 275 | 3 | 61 | 659 | 1 | 569 | 0.0 | 576 |
| MS.gene75183.t1 | MTR_2g073260 | 34.279 | 811 | 464 | 20 | 1 | 792 | 74 | 834 | 2.41e-144 | 451 |
| MS.gene75183.t1 | MTR_0034s0170 | 35.714 | 756 | 423 | 21 | 58 | 792 | 83 | 796 | 8.20e-140 | 438 |
| MS.gene75183.t1 | MTR_8g087910 | 38.040 | 347 | 196 | 7 | 37 | 380 | 54 | 384 | 1.06e-70 | 239 |
| MS.gene75183.t1 | MTR_8g087930 | 32.877 | 438 | 244 | 14 | 387 | 806 | 10 | 415 | 6.68e-57 | 204 |
| MS.gene75183.t1 | MTR_3g076810 | 43.243 | 185 | 85 | 3 | 8 | 192 | 6 | 170 | 1.00e-45 | 162 |
| MS.gene75183.t1 | MTR_3g467040 | 53.271 | 107 | 50 | 0 | 483 | 589 | 110 | 216 | 1.28e-32 | 126 |
| MS.gene75183.t1 | MTR_3g467040 | 41.228 | 114 | 67 | 0 | 308 | 421 | 1 | 114 | 4.28e-23 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75183.t1 | AT4G17770 | 77.374 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0 | 1410 |
| MS.gene75183.t1 | AT4G17770 | 77.374 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0 | 1410 |
| MS.gene75183.t1 | AT1G68020 | 71.114 | 862 | 224 | 6 | 1 | 843 | 1 | 856 | 0.0 | 1301 |
| MS.gene75183.t1 | AT1G68020 | 71.114 | 862 | 224 | 6 | 1 | 843 | 1 | 856 | 0.0 | 1301 |
| MS.gene75183.t1 | AT1G06410 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1181 |
| MS.gene75183.t1 | AT1G06410 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1181 |
| MS.gene75183.t1 | AT1G06410 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1181 |
| MS.gene75183.t1 | AT1G23870 | 63.860 | 855 | 307 | 1 | 1 | 853 | 1 | 855 | 0.0 | 1158 |
| MS.gene75183.t1 | AT1G70290 | 62.426 | 841 | 309 | 3 | 1 | 839 | 1 | 836 | 0.0 | 1120 |
| MS.gene75183.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene75183.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene75183.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene75183.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene75183.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene75183.t1 | AT1G68020 | 71.701 | 682 | 170 | 5 | 1 | 665 | 1 | 676 | 0.0 | 1045 |
| MS.gene75183.t1 | AT2G18700 | 58.392 | 846 | 338 | 7 | 1 | 842 | 1 | 836 | 0.0 | 1043 |
| MS.gene75183.t1 | AT1G70290 | 58.621 | 841 | 303 | 4 | 1 | 839 | 1 | 798 | 0.0 | 1030 |
| MS.gene75183.t1 | AT1G60140 | 61.804 | 754 | 288 | 0 | 1 | 754 | 1 | 754 | 0.0 | 1007 |
| MS.gene75183.t1 | AT1G16980 | 34.761 | 817 | 462 | 26 | 60 | 850 | 13 | 784 | 1.28e-145 | 450 |
| MS.gene75183.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene75183.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene75183.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene75183.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene75183.t1 | AT4G27550 | 33.976 | 830 | 450 | 27 | 56 | 837 | 1 | 780 | 3.20e-137 | 427 |
| MS.gene75183.t1 | AT4G27550 | 34.135 | 832 | 455 | 28 | 56 | 837 | 1 | 789 | 1.52e-136 | 426 |
| MS.gene75183.t1 | AT1G16980 | 35.220 | 636 | 353 | 20 | 60 | 681 | 13 | 603 | 6.65e-118 | 373 |
Find 196 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGATAGCTTTCTAAAGTT+TGG | 0.197254 | 1.3:+74652329 | None:intergenic |
| CTTCTGAATTCTGACCTTAT+AGG | 0.215099 | 1.3:-74653289 | MS.gene75183:CDS |
| AGATGCTGGGGAATTGGTTT+TGG | 0.230491 | 1.3:-74652380 | MS.gene75183:CDS |
| CCACCAGCATGCTCTTCTTT+TGG | 0.238177 | 1.3:+74652633 | None:intergenic |
| AGGAATCAGCTTAAAACTTT+TGG | 0.239280 | 1.3:-74653002 | MS.gene75183:CDS |
| TTCTGAATTCTGACCTTATA+GGG | 0.267422 | 1.3:-74653288 | MS.gene75183:CDS |
| TGTGTCTTCCAAGTAATATT+TGG | 0.281526 | 1.3:+74650883 | None:intergenic |
| CTTCCTGTTGGTATTCATAT+AGG | 0.288144 | 1.3:-74653139 | MS.gene75183:CDS |
| CATCATTAAGCGGCGCGATT+CGG | 0.290810 | 1.3:-74652586 | MS.gene75183:CDS |
| CAAGCACCGAGCGATTCTTT+TGG | 0.298713 | 1.3:-74652276 | MS.gene75183:CDS |
| CCAAGAGTGGCAACTGTTGC+TGG | 0.299481 | 1.3:-74653961 | MS.gene75183:CDS |
| CACAATGAAAACACAATTCT+TGG | 0.302805 | 1.3:+74652163 | None:intergenic |
| GAATTTGCAGACCGAGATTT+CGG | 0.306462 | 1.3:-74651751 | MS.gene75183:CDS |
| CAGATAGCTTTCTAAAGTTT+GGG | 0.314076 | 1.3:+74652330 | None:intergenic |
| TCCTTTCCGCGGCCTCTAGC+AGG | 0.317442 | 1.3:+74652911 | None:intergenic |
| TTGCTTAATGAGGAGATAAC+TGG | 0.325875 | 1.3:+74650792 | None:intergenic |
| TACGCACGATGTTGCATATT+GGG | 0.340179 | 1.3:-74652456 | MS.gene75183:CDS |
| CCAAACCAGAGCACTCTCTT+TGG | 0.342936 | 1.3:+74651780 | None:intergenic |
| TCTTTCCTTTGTGCCTTCAA+TGG | 0.344898 | 1.3:+74653838 | None:intergenic |
| TTTGGATTATGATAGTACTA+TGG | 0.345249 | 1.3:-74652258 | MS.gene75183:CDS |
| AGCTATGGATTCCGCCTTAA+TGG | 0.346795 | 1.3:-74652531 | MS.gene75183:CDS |
| GGTTTAACTTCCACAATGTA+TGG | 0.356426 | 1.3:+74651652 | None:intergenic |
| GCAACATCATCTTGCTCAAT+TGG | 0.362213 | 1.3:+74653697 | None:intergenic |
| TCTGTATATAACTGCATAAC+TGG | 0.363196 | 1.3:+74651829 | None:intergenic |
| AGGAGGAGATGCTGGGGAAT+TGG | 0.363586 | 1.3:-74652386 | MS.gene75183:CDS |
| AAGCTTCCCATTCTTCAGTA+TGG | 0.363738 | 1.3:+74651893 | None:intergenic |
| AGATCAGATGAGGACATGTT+TGG | 0.364020 | 1.3:-74650986 | MS.gene75183:CDS |
| TTCAGACTCCGGGACCATTA+AGG | 0.365240 | 1.3:+74652517 | None:intergenic |
| CTTCCGCTGTCGCCTGATCT+TGG | 0.368992 | 1.3:-74653559 | MS.gene75183:CDS |
| CTAAGAAGTTCATCTCTAAC+AGG | 0.372241 | 1.3:+74653316 | None:intergenic |
| CCAATGCATAGAACAAAATC+TGG | 0.378049 | 1.3:+74651016 | None:intergenic |
| GTTGTATCGATCAAGATTAC+AGG | 0.378659 | 1.3:+74652812 | None:intergenic |
| GGTTCATGACTACCACTTGA+TGG | 0.384948 | 1.3:-74653434 | MS.gene75183:CDS |
| ATCATCTGAGGAGGAGATGC+TGG | 0.385858 | 1.3:-74652394 | MS.gene75183:CDS |
| GTCGATTTGATCGATCTCTT+TGG | 0.389308 | 1.3:-74653534 | MS.gene75183:CDS |
| TTTGTTGCAGGGTGTGAGTA+AGG | 0.391370 | 1.3:-74651089 | MS.gene75183:intron |
| CTTTCGGTCGTGAGAAGAAA+AGG | 0.392381 | 1.3:-74653987 | MS.gene75183:CDS |
| ATCTGTTTCCAGTCAAAATC+AGG | 0.395840 | 1.3:+74651859 | None:intergenic |
| GTTTCTGTAAGCAACATCTA+TGG | 0.403151 | 1.3:-74653600 | MS.gene75183:CDS |
| GCACAAAGGAAAGAGGAAAA+TGG | 0.406553 | 1.3:-74653829 | MS.gene75183:CDS |
| ACATTGTTTCAGCTTATAAG+AGG | 0.408474 | 1.3:-74652301 | MS.gene75183:CDS |
| GATCATCCTCTCTTGAGAAA+TGG | 0.409237 | 1.3:+74653879 | None:intergenic |
| AAAAGGATAAACGACACATT+TGG | 0.409911 | 1.3:-74652851 | MS.gene75183:CDS |
| ATCATTAAGCGGCGCGATTC+GGG | 0.410018 | 1.3:-74652585 | MS.gene75183:CDS |
| TAAGGAACTTCTTGATCATC+TGG | 0.414096 | 1.3:-74651716 | MS.gene75183:CDS |
| TGCGTCATGAGAAGCATTAT+AGG | 0.414289 | 1.3:-74652487 | MS.gene75183:CDS |
| GATCAGATGAGGACATGTTT+GGG | 0.414515 | 1.3:-74650985 | MS.gene75183:CDS |
| CGAAAGTATGAAACCCTATA+AGG | 0.416886 | 1.3:+74653275 | None:intergenic |
| GTACGCACGATGTTGCATAT+TGG | 0.417861 | 1.3:-74652457 | MS.gene75183:CDS |
| CCAGCAACAGTTGCCACTCT+TGG | 0.421922 | 1.3:+74653961 | None:intergenic |
| TCCCAACATTCTACTGCAAC+AGG | 0.422981 | 1.3:+74653231 | None:intergenic |
| TCTGATAACAATGCAACAAA+AGG | 0.423959 | 1.3:-74651047 | MS.gene75183:CDS |
| TCCTGTTGCAGTAGAATGTT+GGG | 0.425459 | 1.3:-74653232 | MS.gene75183:CDS |
| AATGAGGGGAAAGGTTGTTC+TGG | 0.426046 | 1.3:-74652948 | MS.gene75183:CDS |
| ATCAGAACCAACACTGTTGT+TGG | 0.428130 | 1.3:+74653912 | None:intergenic |
| CCAAAGAGAGTGCTCTGGTT+TGG | 0.428765 | 1.3:-74651780 | MS.gene75183:CDS |
| TCATGCGGCTCGCCGTCTTT+CGG | 0.430507 | 1.3:-74654003 | MS.gene75183:CDS |
| AAGTAATATTTGGCTTTGCT+TGG | 0.430940 | 1.3:+74650893 | None:intergenic |
| CGGACGAAGGAAAAGGACTA+TGG | 0.431241 | 1.3:+74653356 | None:intergenic |
| GATGTTGAAACAATCTATAT+TGG | 0.433844 | 1.3:-74653742 | MS.gene75183:CDS |
| GCGTAGCTTCTTGCAGGATC+TGG | 0.434843 | 1.3:-74652432 | MS.gene75183:CDS |
| AGGATTTCGAGTAATAGCTT+TGG | 0.436633 | 1.3:-74652354 | MS.gene75183:CDS |
| ACCCAAACAAAATCCTCATC+AGG | 0.437641 | 1.3:+74653454 | None:intergenic |
| CGAATCGCGCCGCTTAATGA+TGG | 0.438856 | 1.3:+74652587 | None:intergenic |
| TTGGGCGCGTAGCTTCTTGC+AGG | 0.441346 | 1.3:-74652438 | MS.gene75183:CDS |
| TCAAATCGACCACCAAGATC+AGG | 0.444062 | 1.3:+74653547 | None:intergenic |
| AAGGTCAAACTGTGATGCTT+GGG | 0.444131 | 1.3:-74653048 | MS.gene75183:CDS |
| CAAAAGAATCGCTCGGTGCT+TGG | 0.449492 | 1.3:+74652277 | None:intergenic |
| TCACAGTTTGACCTTTGAAC+TGG | 0.450018 | 1.3:+74653056 | None:intergenic |
| AACGACACATTTGGAAGGCC+TGG | 0.452363 | 1.3:-74652842 | MS.gene75183:CDS |
| GGAAAGAGGAAAATGGTAAG+TGG | 0.457394 | 1.3:-74653822 | MS.gene75183:CDS |
| CTCCTGTTGCAGTAGAATGT+TGG | 0.457602 | 1.3:-74653233 | MS.gene75183:CDS |
| CAAGAGAGGATGATCATTGT+TGG | 0.460566 | 1.3:-74653871 | MS.gene75183:CDS |
| TGGTAACCAGCTTCCATTGA+AGG | 0.461364 | 1.3:-74653851 | MS.gene75183:CDS |
| TTACAGCTGAAAGATGGTCT+TGG | 0.463158 | 1.3:-74653769 | MS.gene75183:CDS |
| AAGACCTATGTAGCCTCGCT+TGG | 0.466700 | 1.3:+74653195 | None:intergenic |
| AGCAGTTTGTTCAGAAGCAT+TGG | 0.467175 | 1.3:+74650829 | None:intergenic |
| AGATTTAACAGGGCAAGGCT+TGG | 0.467489 | 1.3:-74653388 | MS.gene75183:CDS |
| GACAAGCCATACTGAAGAAT+GGG | 0.468184 | 1.3:-74651899 | MS.gene75183:CDS |
| CAAGGAAACACGTCCGCAAT+GGG | 0.469994 | 1.3:+74650932 | None:intergenic |
| CTACAAATGATATACTCATA+TGG | 0.471654 | 1.3:+74652704 | None:intergenic |
| CTGGTGGTGTCTGAATTCAT+TGG | 0.473518 | 1.3:-74652617 | MS.gene75183:CDS |
| ATTTGATCGATCTCTTTGGC+AGG | 0.477042 | 1.3:-74653530 | MS.gene75183:CDS |
| AAAGGTCAAACTGTGATGCT+TGG | 0.478423 | 1.3:-74653049 | MS.gene75183:CDS |
| AAACTTATGCAACCGTGAAA+AGG | 0.479354 | 1.3:-74652868 | MS.gene75183:CDS |
| CAATCCAAGCGAGGCTACAT+AGG | 0.479480 | 1.3:-74653199 | MS.gene75183:CDS |
| TTTGTGCCTTCAATGGAAGC+TGG | 0.479814 | 1.3:+74653845 | None:intergenic |
| TACATAGGTCTTGAGTACTA+TGG | 0.482799 | 1.3:-74653184 | MS.gene75183:CDS |
| TTAGAAAAGCTTGCTTAATG+AGG | 0.484009 | 1.3:+74650782 | None:intergenic |
| TATATCTCGGACGAAGGAAA+AGG | 0.486903 | 1.3:+74653349 | None:intergenic |
| GAATCGCGCCGCTTAATGAT+GGG | 0.487141 | 1.3:+74652588 | None:intergenic |
| CGATACAACACTCCAGAGTT+GGG | 0.487205 | 1.3:-74652798 | MS.gene75183:CDS |
| AAGCGATTCTCTCCCAACTC+TGG | 0.499258 | 1.3:+74652786 | None:intergenic |
| TGATGCTGTTGCTGAAGCTA+TGG | 0.500313 | 1.3:-74652546 | MS.gene75183:CDS |
| ATGGTAAGTGGGAATTCACT+TGG | 0.502564 | 1.3:-74653810 | MS.gene75183:CDS |
| AAGCAAAGCCAAATATTACT+TGG | 0.502945 | 1.3:-74650891 | MS.gene75183:CDS |
| CTTGTTACAGCAGTGAGAGA+TGG | 0.504181 | 1.3:-74652740 | MS.gene75183:CDS |
| GAGCGAGCAAAATGGCTTCA+AGG | 0.504643 | 1.3:-74654053 | None:intergenic |
| GACGTGTTTCCTTGCACCGT+TGG | 0.505796 | 1.3:-74650923 | MS.gene75183:CDS |
| TGGCCTATATGAATACCAAC+AGG | 0.508722 | 1.3:+74653136 | None:intergenic |
| CATCTCTAACAGGAAGGGTT+CGG | 0.508766 | 1.3:+74653326 | None:intergenic |
| AAGATTACAGGTGTGTATCC+AGG | 0.509121 | 1.3:+74652824 | None:intergenic |
| TCGATACAACACTCCAGAGT+TGG | 0.509920 | 1.3:-74652799 | MS.gene75183:CDS |
| GGACAAGCCATACTGAAGAA+TGG | 0.510330 | 1.3:-74651900 | MS.gene75183:CDS |
| AGCTCAGGTGGAAGGAAAGT+TGG | 0.512723 | 1.3:+74653643 | None:intergenic |
| GAAAGAGATTTAACAGGGCA+AGG | 0.513388 | 1.3:-74653393 | MS.gene75183:CDS |
| CTGATAACAATGCAACAAAA+GGG | 0.514427 | 1.3:-74651046 | MS.gene75183:CDS |
| GTGGGAATTCACTTGGGATG+AGG | 0.515265 | 1.3:-74653803 | MS.gene75183:CDS |
| ATGGAAACAGCTTCAGCACT+AGG | 0.515512 | 1.3:+74652209 | None:intergenic |
| TTGTTGCAGGGTGTGAGTAA+GGG | 0.516408 | 1.3:-74651088 | MS.gene75183:intron |
| TTCTTCTCACGACCGAAAGA+CGG | 0.519257 | 1.3:+74653991 | None:intergenic |
| TTCATACTTTCGACTATGCT+AGG | 0.522500 | 1.3:-74653264 | MS.gene75183:CDS |
| CTTCTTGCAGGATCTGGAAA+GGG | 0.524177 | 1.3:-74652426 | MS.gene75183:CDS |
| CTTGACATGAACCGAAATCT+CGG | 0.524650 | 1.3:+74651740 | None:intergenic |
| GATAGTACTATGGTGCAGCC+TGG | 0.524793 | 1.3:-74652248 | MS.gene75183:CDS |
| TCATCTGAGGAGGAGATGCT+GGG | 0.527479 | 1.3:-74652393 | MS.gene75183:CDS |
| CATTGTGGAAGTTAAACCTC+AGG | 0.529575 | 1.3:-74651647 | MS.gene75183:intron |
| AGCATTAAGATTCTTCCTGT+TGG | 0.529787 | 1.3:-74653151 | MS.gene75183:CDS |
| TGAAGTAAGATCTAACAAGT+TGG | 0.532544 | 1.3:+74654023 | None:intergenic |
| GAGCCTGTTTCAGTTAAAAG+TGG | 0.534096 | 1.3:-74651676 | MS.gene75183:CDS |
| GCAAACCCTGCTAGAGGCCG+CGG | 0.535783 | 1.3:-74652917 | MS.gene75183:CDS |
| GCAAGGAAACACGTCCGCAA+TGG | 0.535831 | 1.3:+74650931 | None:intergenic |
| CCTTTCCGCGGCCTCTAGCA+GGG | 0.538093 | 1.3:+74652912 | None:intergenic |
| CCGCTGTCGCCTGATCTTGG+TGG | 0.540431 | 1.3:-74653556 | MS.gene75183:CDS |
| GGTGTTGCACTAATTGATCC+AGG | 0.542444 | 1.3:+74652230 | None:intergenic |
| TTTACAACATGCTGAAATGA+GGG | 0.544384 | 1.3:-74652963 | MS.gene75183:CDS |
| GATTCATGACTGACTCAAGC+TGG | 0.544391 | 1.3:+74653116 | None:intergenic |
| GATGACATGGATATCTTCAA+AGG | 0.545640 | 1.3:-74653022 | MS.gene75183:CDS |
| GGATTCCGCCTTAATGGTCC+CGG | 0.546381 | 1.3:-74652525 | MS.gene75183:CDS |
| GAAAGAGGAAAATGGTAAGT+GGG | 0.548871 | 1.3:-74653821 | MS.gene75183:CDS |
| TAGAATTTAGTGAAAAGCTC+AGG | 0.548984 | 1.3:+74653628 | None:intergenic |
| AGAGAAACACTCTCACTGAA+TGG | 0.549371 | 1.3:-74652130 | MS.gene75183:CDS |
| TTTCGGTTCATGTCAAGCTA+AGG | 0.551647 | 1.3:-74651734 | MS.gene75183:CDS |
| CTTGGACTTGCTGCAGAACA+CGG | 0.553602 | 1.3:-74652089 | MS.gene75183:CDS |
| GTTTAACTTCCACAATGTAT+GGG | 0.566536 | 1.3:+74651653 | None:intergenic |
| ACTGCACAAGCTGTTCAAGA+TGG | 0.567111 | 1.3:+74652190 | None:intergenic |
| TAGTGAAAAGCTCAGGTGGA+AGG | 0.568307 | 1.3:+74653635 | None:intergenic |
| CATAATCCAAAAGAATCGCT+CGG | 0.569386 | 1.3:+74652270 | None:intergenic |
| CCCTGCTAGAGGCCGCGGAA+AGG | 0.571655 | 1.3:-74652912 | MS.gene75183:CDS |
| GCTTCTTGCAGGATCTGGAA+AGG | 0.572169 | 1.3:-74652427 | MS.gene75183:CDS |
| CGTCCTCCATTTCTCAAGAG+AGG | 0.575029 | 1.3:-74653885 | MS.gene75183:CDS |
| ATTGAAGGCACAAAGGAAAG+AGG | 0.575033 | 1.3:-74653836 | MS.gene75183:CDS |
| CTCTCTTGAGAAATGGAGGA+CGG | 0.575333 | 1.3:+74653886 | None:intergenic |
| GAAGTTCATCTCTAACAGGA+AGG | 0.577715 | 1.3:+74653320 | None:intergenic |
| TTGTTAGATCTTACTTCATG+CGG | 0.579234 | 1.3:-74654018 | MS.gene75183:CDS |
| AATATTTGCTGATAAAGTGA+TGG | 0.579350 | 1.3:-74653488 | MS.gene75183:CDS |
| GGCTGCTCCCCATCATTAAG+CGG | 0.581670 | 1.3:-74652596 | MS.gene75183:CDS |
| TGCTTAATGAGGAGATAACT+GGG | 0.586765 | 1.3:+74650793 | None:intergenic |
| TTGTTACAGCAGTGAGAGAT+GGG | 0.586812 | 1.3:-74652739 | MS.gene75183:CDS |
| GCGCGATTCGGGTGAATCCG+TGG | 0.589497 | 1.3:-74652574 | MS.gene75183:CDS |
| GATGCTTGGGGTGGATGACA+TGG | 0.591172 | 1.3:-74653035 | MS.gene75183:CDS |
| AGAGTCCAAAGAGAGTGCTC+TGG | 0.593330 | 1.3:-74651785 | MS.gene75183:CDS |
| GAAGAAAAGGCTTCCAAGAG+TGG | 0.594619 | 1.3:-74653974 | MS.gene75183:CDS |
| AGGAAGGGTTCGGTATATCT+CGG | 0.595173 | 1.3:+74653336 | None:intergenic |
| TCTTTCTGAGACAGAAAGCA+AGG | 0.595405 | 1.3:-74653095 | MS.gene75183:CDS |
| CATCCTCTCTTGAGAAATGG+AGG | 0.595883 | 1.3:+74653882 | None:intergenic |
| GAGCTAAGAAACCAGTTCAA+AGG | 0.597173 | 1.3:-74653067 | MS.gene75183:CDS |
| TAAAAGTGGCCCATACATTG+TGG | 0.597276 | 1.3:-74651662 | MS.gene75183:CDS |
| AAGTTCATCTCTAACAGGAA+GGG | 0.599310 | 1.3:+74653321 | None:intergenic |
| TTGGGGTAATAACAAGTGCA+AGG | 0.603403 | 1.3:-74650967 | MS.gene75183:CDS |
| TATCCAAAAGAAGAGCATGC+TGG | 0.604070 | 1.3:-74652636 | MS.gene75183:CDS |
| CCACCAAGATCAGGCGACAG+CGG | 0.612409 | 1.3:+74653556 | None:intergenic |
| GATGAAACCAACAACAGTGT+TGG | 0.613941 | 1.3:-74653919 | MS.gene75183:CDS |
| GCAACAGCATCAATATTCCA+CGG | 0.614265 | 1.3:+74652557 | None:intergenic |
| TGGTAAGTGGGAATTCACTT+GGG | 0.618013 | 1.3:-74653809 | MS.gene75183:CDS |
| GTTCGGTATATCTCGGACGA+AGG | 0.622286 | 1.3:+74653343 | None:intergenic |
| ACATGCTGAAATGAGGGGAA+AGG | 0.622463 | 1.3:-74652957 | MS.gene75183:CDS |
| AATTTAGTGAAAAGCTCAGG+TGG | 0.623435 | 1.3:+74653631 | None:intergenic |
| GGAAGTTATCAACCCTGATG+AGG | 0.625660 | 1.3:-74653467 | MS.gene75183:CDS |
| AAACTTTAGAAAGCTATCTG+TGG | 0.628781 | 1.3:-74652327 | MS.gene75183:CDS |
| AGCTTCCATTGAAGGCACAA+AGG | 0.630490 | 1.3:-74653843 | MS.gene75183:CDS |
| AATCGCGCCGCTTAATGATG+GGG | 0.632508 | 1.3:+74652589 | None:intergenic |
| TGGGGTAATAACAAGTGCAA+GGG | 0.633008 | 1.3:-74650966 | MS.gene75183:CDS |
| TTACAACATGCTGAAATGAG+GGG | 0.634606 | 1.3:-74652962 | MS.gene75183:CDS |
| GGAAGCATGTAGTGAAACAA+AGG | 0.636066 | 1.3:+74653577 | None:intergenic |
| CTTCTTGCACATCCTTTCCG+CGG | 0.637125 | 1.3:+74652900 | None:intergenic |
| CCCAAACAAAATCCTCATCA+GGG | 0.640182 | 1.3:+74653455 | None:intergenic |
| TGGTGATGACAGATCAGATG+AGG | 0.641223 | 1.3:-74650996 | MS.gene75183:CDS |
| GAGTATATCATTTGTAGACA+AGG | 0.642548 | 1.3:-74652698 | MS.gene75183:CDS |
| GGCATCTCTATCGCCCATTG+CGG | 0.645098 | 1.3:-74650945 | MS.gene75183:CDS |
| CATCTGAGGAGGAGATGCTG+GGG | 0.645178 | 1.3:-74652392 | MS.gene75183:CDS |
| TTTGAGAAAGAGATTTAACA+GGG | 0.647753 | 1.3:-74653398 | MS.gene75183:CDS |
| CAAATCGCAAACCCTGCTAG+AGG | 0.649493 | 1.3:-74652923 | MS.gene75183:CDS |
| AATCGCTTACTATGCAATTG+CGG | 0.650771 | 1.3:-74652771 | MS.gene75183:CDS |
| CTTGTAGAGATCATCTGAGG+AGG | 0.654064 | 1.3:-74652403 | MS.gene75183:CDS |
| GGATAAACGACACATTTGGA+AGG | 0.660498 | 1.3:-74652847 | MS.gene75183:CDS |
| TTATATACAGAAACTACTGA+TGG | 0.662521 | 1.3:-74651817 | MS.gene75183:CDS |
| CCAAAAGAAGAGCATGCTGG+TGG | 0.662803 | 1.3:-74652633 | MS.gene75183:CDS |
| AGACTCCGGGACCATTAAGG+CGG | 0.664593 | 1.3:+74652520 | None:intergenic |
| ATCAGATGAGGACATGTTTG+GGG | 0.667558 | 1.3:-74650984 | MS.gene75183:CDS |
| TCAAACTGTGATGCTTGGGG+TGG | 0.668780 | 1.3:-74653044 | MS.gene75183:CDS |
| ACGAAGGAAAAGGACTATGG+AGG | 0.674332 | 1.3:+74653359 | None:intergenic |
| GGGCTTGTAGAGATCATCTG+AGG | 0.683476 | 1.3:-74652406 | MS.gene75183:CDS |
| ATGTTGGAAGAACCATCAAG+TGG | 0.693809 | 1.3:+74653422 | None:intergenic |
| AGGTCAAACTGTGATGCTTG+GGG | 0.701625 | 1.3:-74653047 | MS.gene75183:CDS |
| ATTGCTTATCAATCCAAGCG+AGG | 0.704535 | 1.3:-74653208 | MS.gene75183:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATGATTAATAATACTA+TGG | - | chr1.3:74653618-74653637 | MS.gene75183:CDS | 15.0% |
| !! | GATCTTTAGTTAAAATAAAA+AGG | - | chr1.3:74653317-74653336 | MS.gene75183:CDS | 15.0% |
| !!! | AAATAAATTGTTTTCTTTGA+TGG | - | chr1.3:74652868-74652887 | MS.gene75183:CDS | 15.0% |
| !! | ATTAAGAAACAGACATTTAT+CGG | + | chr1.3:74653383-74653402 | None:intergenic | 20.0% |
| !! | TTGAAGTTAATTCTAATCTT+TGG | - | chr1.3:74653645-74653664 | MS.gene75183:CDS | 20.0% |
| !! | TTTGTATACTACTTATTGTT+GGG | - | chr1.3:74653287-74653306 | MS.gene75183:CDS | 20.0% |
| !!! | AAATTTATCCTTTTTTTTCC+AGG | - | chr1.3:74652917-74652936 | MS.gene75183:CDS | 20.0% |
| ! | AATCTCTTTCTCAAAAATGT+TGG | + | chr1.3:74651435-74651454 | None:intergenic | 25.0% |
| ! | AGTTCATGATCTTAGAAATA+AGG | + | chr1.3:74653694-74653713 | None:intergenic | 25.0% |
| ! | ATAAAAAGGATACTTGAATC+TGG | - | chr1.3:74653331-74653350 | MS.gene75183:CDS | 25.0% |
| ! | CTACAAATGATATACTCATA+TGG | + | chr1.3:74652137-74652156 | None:intergenic | 25.0% |
| ! | GATGTTGAAACAATCTATAT+TGG | - | chr1.3:74651096-74651115 | MS.gene75183:intron | 25.0% |
| ! | GTTTGTATACTACTTATTGT+TGG | - | chr1.3:74653286-74653305 | MS.gene75183:CDS | 25.0% |
| ! | TTATATACAGAAACTACTGA+TGG | - | chr1.3:74653021-74653040 | MS.gene75183:CDS | 25.0% |
| ! | TTTAAAAGAGTGAGTTCATT+TGG | + | chr1.3:74652821-74652840 | None:intergenic | 25.0% |
| ! | TTTGAGAAAGAGATTTAACA+GGG | - | chr1.3:74651440-74651459 | MS.gene75183:intron | 25.0% |
| ! | TTTGGATTATGATAGTACTA+TGG | - | chr1.3:74652580-74652599 | MS.gene75183:CDS | 25.0% |
| !! | AATATTTGCTGATAAAGTGA+TGG | - | chr1.3:74651350-74651369 | MS.gene75183:intron | 25.0% |
| !! | CTTTTCACTAAATTCTATCA+TGG | - | chr1.3:74651216-74651235 | MS.gene75183:intron | 25.0% |
| !!! | ACTTTTTTATTACTAACCTG+AGG | + | chr1.3:74653210-74653229 | None:intergenic | 25.0% |
| !!! | TTTTGAGAAAGAGATTTAAC+AGG | - | chr1.3:74651439-74651458 | MS.gene75183:intron | 25.0% |
| AAAAGGATAAACGACACATT+TGG | - | chr1.3:74651987-74652006 | MS.gene75183:intron | 30.0% | |
| AAGCAAAGCCAAATATTACT+TGG | - | chr1.3:74653947-74653966 | MS.gene75183:CDS | 30.0% | |
| ACATTGTTTCAGCTTATAAG+AGG | - | chr1.3:74652537-74652556 | MS.gene75183:CDS | 30.0% | |
| CACAATGAAAACACAATTCT+TGG | + | chr1.3:74652678-74652697 | None:intergenic | 30.0% | |
| CTGATAACAATGCAACAAAA+GGG | - | chr1.3:74653792-74653811 | MS.gene75183:CDS | 30.0% | |
| GAGTATATCATTTGTAGACA+AGG | - | chr1.3:74652140-74652159 | MS.gene75183:CDS | 30.0% | |
| TAGAATTTAGTGAAAAGCTC+AGG | + | chr1.3:74651213-74651232 | None:intergenic | 30.0% | |
| TCATGATCTTAGAAATAAGG+AGG | + | chr1.3:74653691-74653710 | None:intergenic | 30.0% | |
| TCGTAGATCAAAGAAAATAG+CGG | + | chr1.3:74653568-74653587 | None:intergenic | 30.0% | |
| TCTGATAACAATGCAACAAA+AGG | - | chr1.3:74653791-74653810 | MS.gene75183:CDS | 30.0% | |
| TCTGTATATAACTGCATAAC+TGG | + | chr1.3:74653012-74653031 | None:intergenic | 30.0% | |
| TGAAGTAAGATCTAACAAGT+TGG | + | chr1.3:74650818-74650837 | None:intergenic | 30.0% | |
| TGTGTCTTCCAAGTAATATT+TGG | + | chr1.3:74653958-74653977 | None:intergenic | 30.0% | |
| TTATGCATGAAAGAATGTTG+TGG | - | chr1.3:74652842-74652861 | MS.gene75183:CDS | 30.0% | |
| TTCTGAATTCTGACCTTATA+GGG | - | chr1.3:74651550-74651569 | MS.gene75183:intron | 30.0% | |
| TTGTTAGATCTTACTTCATG+CGG | - | chr1.3:74650820-74650839 | MS.gene75183:CDS | 30.0% | |
| TTTACAACATGCTGAAATGA+GGG | - | chr1.3:74651875-74651894 | MS.gene75183:CDS | 30.0% | |
| ! | AAACTTTAGAAAGCTATCTG+TGG | - | chr1.3:74652511-74652530 | MS.gene75183:CDS | 30.0% |
| ! | AATTGTGTTTTCATTGTGAG+TGG | - | chr1.3:74652680-74652699 | MS.gene75183:CDS | 30.0% |
| ! | AGGAATCAGCTTAAAACTTT+TGG | - | chr1.3:74651836-74651855 | MS.gene75183:CDS | 30.0% |
| ! | GAGAAGATAGATGAGATTTT+AGG | - | chr1.3:74652167-74652186 | MS.gene75183:CDS | 30.0% |
| ! | GTTTAACTTCCACAATGTAT+GGG | + | chr1.3:74653188-74653207 | None:intergenic | 30.0% |
| ! | TGGTCATGAATTCTTTTGAA+GGG | - | chr1.3:74653665-74653684 | MS.gene75183:CDS | 30.0% |
| ! | TTGGTCATGAATTCTTTTGA+AGG | - | chr1.3:74653664-74653683 | MS.gene75183:CDS | 30.0% |
| ! | TTTTACAACATGCTGAAATG+AGG | - | chr1.3:74651874-74651893 | MS.gene75183:CDS | 30.0% |
| ! | TTTTCTTCTTGTGAAAAGCT+TGG | - | chr1.3:74652731-74652750 | MS.gene75183:CDS | 30.0% |
| !! | AAGTAATATTTGGCTTTGCT+TGG | + | chr1.3:74653948-74653967 | None:intergenic | 30.0% |
| !! | ACAGATAGCTTTCTAAAGTT+TGG | + | chr1.3:74652512-74652531 | None:intergenic | 30.0% |
| !! | CAGATAGCTTTCTAAAGTTT+GGG | + | chr1.3:74652511-74652530 | None:intergenic | 30.0% |
| AAACTTATGCAACCGTGAAA+AGG | - | chr1.3:74651970-74651989 | MS.gene75183:intron | 35.0% | |
| AAGTTCATCTCTAACAGGAA+GGG | + | chr1.3:74651520-74651539 | None:intergenic | 35.0% | |
| AATCGCTTACTATGCAATTG+CGG | - | chr1.3:74652067-74652086 | MS.gene75183:intron | 35.0% | |
| AATTTAGTGAAAAGCTCAGG+TGG | + | chr1.3:74651210-74651229 | None:intergenic | 35.0% | |
| AGCATTAAGATTCTTCCTGT+TGG | - | chr1.3:74651687-74651706 | MS.gene75183:CDS | 35.0% | |
| ATCTGTTTCCAGTCAAAATC+AGG | + | chr1.3:74652982-74653001 | None:intergenic | 35.0% | |
| CATAATCCAAAAGAATCGCT+CGG | + | chr1.3:74652571-74652590 | None:intergenic | 35.0% | |
| CCAATGCATAGAACAAAATC+TGG | + | chr1.3:74653825-74653844 | None:intergenic | 35.0% | |
| CTAAGAAGTTCATCTCTAAC+AGG | + | chr1.3:74651525-74651544 | None:intergenic | 35.0% | |
| CTTCCTGTTGGTATTCATAT+AGG | - | chr1.3:74651699-74651718 | MS.gene75183:CDS | 35.0% | |
| CTTCTGAATTCTGACCTTAT+AGG | - | chr1.3:74651549-74651568 | MS.gene75183:intron | 35.0% | |
| GAAAGAGGAAAATGGTAAGT+GGG | - | chr1.3:74651017-74651036 | MS.gene75183:CDS | 35.0% | |
| GAGTGAGTTCATTTGGTATA+AGG | + | chr1.3:74652814-74652833 | None:intergenic | 35.0% | |
| GATGACATGGATATCTTCAA+AGG | - | chr1.3:74651816-74651835 | MS.gene75183:CDS | 35.0% | |
| GTTTCTGTAAGCAACATCTA+TGG | - | chr1.3:74651238-74651257 | MS.gene75183:intron | 35.0% | |
| TAAGGAACTTCTTGATCATC+TGG | - | chr1.3:74653122-74653141 | MS.gene75183:CDS | 35.0% | |
| TACATAGGTCTTGAGTACTA+TGG | - | chr1.3:74651654-74651673 | MS.gene75183:CDS | 35.0% | |
| TTACAACATGCTGAAATGAG+GGG | - | chr1.3:74651876-74651895 | MS.gene75183:CDS | 35.0% | |
| TTCATACTTTCGACTATGCT+AGG | - | chr1.3:74651574-74651593 | MS.gene75183:intron | 35.0% | |
| TTCTTTGATGGAGATTGCTT+AGG | - | chr1.3:74652880-74652899 | MS.gene75183:CDS | 35.0% | |
| ! | AGGATTTCGAGTAATAGCTT+TGG | - | chr1.3:74652484-74652503 | MS.gene75183:CDS | 35.0% |
| ! | CACTTGACATTTTTGTTGCA+GGG | - | chr1.3:74653738-74653757 | MS.gene75183:CDS | 35.0% |
| ! | CAGCTTAAAACTTTTGGCAA+TGG | - | chr1.3:74651842-74651861 | MS.gene75183:CDS | 35.0% |
| ! | CCAGATTTTGTTCTATGCAT+TGG | - | chr1.3:74653822-74653841 | MS.gene75183:CDS | 35.0% |
| ! | CGAAAGTATGAAACCCTATA+AGG | + | chr1.3:74651566-74651585 | None:intergenic | 35.0% |
| ! | CTTCTTTTACAGCTGAAAGA+TGG | - | chr1.3:74651063-74651082 | MS.gene75183:CDS | 35.0% |
| ! | GGTTTAACTTCCACAATGTA+TGG | + | chr1.3:74653189-74653208 | None:intergenic | 35.0% |
| ! | GTTGTATCGATCAAGATTAC+AGG | + | chr1.3:74652029-74652048 | None:intergenic | 35.0% |
| ! | TGTTTTCATTGTGAGTGGAA+AGG | - | chr1.3:74652685-74652704 | MS.gene75183:CDS | 35.0% |
| !! | TTTGCTTGGTTTTTGACCAA+CGG | + | chr1.3:74653934-74653953 | None:intergenic | 35.0% |
| !!! | TGTGTCGTTTATCCTTTTCA+CGG | + | chr1.3:74651985-74652004 | None:intergenic | 35.0% |
| AAAGGTCAAACTGTGATGCT+TGG | - | chr1.3:74651789-74651808 | MS.gene75183:CDS | 40.0% | |
| AAGATTACAGGTGTGTATCC+AGG | + | chr1.3:74652017-74652036 | None:intergenic | 40.0% | |
| AAGCTTCCCATTCTTCAGTA+TGG | + | chr1.3:74652948-74652967 | None:intergenic | 40.0% | |
| AAGGTCAAACTGTGATGCTT+GGG | - | chr1.3:74651790-74651809 | MS.gene75183:CDS | 40.0% | |
| ACCCAAACAAAATCCTCATC+AGG | + | chr1.3:74651387-74651406 | None:intergenic | 40.0% | |
| AGAGAAACACTCTCACTGAA+TGG | - | chr1.3:74652708-74652727 | MS.gene75183:CDS | 40.0% | |
| AGATCAGATGAGGACATGTT+TGG | - | chr1.3:74653852-74653871 | MS.gene75183:CDS | 40.0% | |
| ATCAGAACCAACACTGTTGT+TGG | + | chr1.3:74650929-74650948 | None:intergenic | 40.0% | |
| ATCAGATGAGGACATGTTTG+GGG | - | chr1.3:74653854-74653873 | MS.gene75183:CDS | 40.0% | |
| ATGGTAAGTGGGAATTCACT+TGG | - | chr1.3:74651028-74651047 | MS.gene75183:CDS | 40.0% | |
| ATGTTGGAAGAACCATCAAG+TGG | + | chr1.3:74651419-74651438 | None:intergenic | 40.0% | |
| ATTGCTTATCAATCCAAGCG+AGG | - | chr1.3:74651630-74651649 | MS.gene75183:intron | 40.0% | |
| ATTTGATCGATCTCTTTGGC+AGG | - | chr1.3:74651308-74651327 | MS.gene75183:intron | 40.0% | |
| CAAGAGAGGATGATCATTGT+TGG | - | chr1.3:74650967-74650986 | MS.gene75183:CDS | 40.0% | |
| CATTGTGGAAGTTAAACCTC+AGG | - | chr1.3:74653191-74653210 | MS.gene75183:CDS | 40.0% | |
| CCCAAACAAAATCCTCATCA+GGG | + | chr1.3:74651386-74651405 | None:intergenic | 40.0% | |
| CCTGCAACAAAAATGTCAAG+TGG | + | chr1.3:74653740-74653759 | None:intergenic | 40.0% | |
| CTTGACATGAACCGAAATCT+CGG | + | chr1.3:74653101-74653120 | None:intergenic | 40.0% | |
| GAAAGAGATTTAACAGGGCA+AGG | - | chr1.3:74651445-74651464 | MS.gene75183:intron | 40.0% | |
| GAAGTTCATCTCTAACAGGA+AGG | + | chr1.3:74651521-74651540 | None:intergenic | 40.0% | |
| GAATTTGCAGACCGAGATTT+CGG | - | chr1.3:74653087-74653106 | MS.gene75183:CDS | 40.0% | |
| GACAAGCCATACTGAAGAAT+GGG | - | chr1.3:74652939-74652958 | MS.gene75183:CDS | 40.0% | |
| GAGCCTGTTTCAGTTAAAAG+TGG | - | chr1.3:74653162-74653181 | MS.gene75183:CDS | 40.0% | |
| GAGCTAAGAAACCAGTTCAA+AGG | - | chr1.3:74651771-74651790 | MS.gene75183:CDS | 40.0% | |
| GATCAGATGAGGACATGTTT+GGG | - | chr1.3:74653853-74653872 | MS.gene75183:CDS | 40.0% | |
| GATCATCCTCTCTTGAGAAA+TGG | + | chr1.3:74650962-74650981 | None:intergenic | 40.0% | |
| GATGAAACCAACAACAGTGT+TGG | - | chr1.3:74650919-74650938 | MS.gene75183:CDS | 40.0% | |
| GCAACAGCATCAATATTCCA+CGG | + | chr1.3:74652284-74652303 | None:intergenic | 40.0% | |
| GCAACATCATCTTGCTCAAT+TGG | + | chr1.3:74651144-74651163 | None:intergenic | 40.0% | |
| GCACAAAGGAAAGAGGAAAA+TGG | - | chr1.3:74651009-74651028 | MS.gene75183:CDS | 40.0% | |
| GGAAAGAGGAAAATGGTAAG+TGG | - | chr1.3:74651016-74651035 | MS.gene75183:CDS | 40.0% | |
| GGATAAACGACACATTTGGA+AGG | - | chr1.3:74651991-74652010 | MS.gene75183:intron | 40.0% | |
| TAAAAGTGGCCCATACATTG+TGG | - | chr1.3:74653176-74653195 | MS.gene75183:CDS | 40.0% | |
| TACGCACGATGTTGCATATT+GGG | - | chr1.3:74652382-74652401 | MS.gene75183:CDS | 40.0% | |
| TATATCTCGGACGAAGGAAA+AGG | + | chr1.3:74651492-74651511 | None:intergenic | 40.0% | |
| TCACAGTTTGACCTTTGAAC+TGG | + | chr1.3:74651785-74651804 | None:intergenic | 40.0% | |
| TCCTGTTGCAGTAGAATGTT+GGG | - | chr1.3:74651606-74651625 | MS.gene75183:intron | 40.0% | |
| TCTTTCCTTTGTGCCTTCAA+TGG | + | chr1.3:74651003-74651022 | None:intergenic | 40.0% | |
| TGATCTACGATTGACAACAC+TGG | - | chr1.3:74653578-74653597 | MS.gene75183:CDS | 40.0% | |
| TGGCCTATATGAATACCAAC+AGG | + | chr1.3:74651705-74651724 | None:intergenic | 40.0% | |
| TGGGGTAATAACAAGTGCAA+GGG | - | chr1.3:74653872-74653891 | MS.gene75183:CDS | 40.0% | |
| TGGTAAGTGGGAATTCACTT+GGG | - | chr1.3:74651029-74651048 | MS.gene75183:CDS | 40.0% | |
| TTACAGCTGAAAGATGGTCT+TGG | - | chr1.3:74651069-74651088 | MS.gene75183:CDS | 40.0% | |
| TTGGGGTAATAACAAGTGCA+AGG | - | chr1.3:74653871-74653890 | MS.gene75183:CDS | 40.0% | |
| TTGTTACAGCAGTGAGAGAT+GGG | - | chr1.3:74652099-74652118 | MS.gene75183:CDS | 40.0% | |
| TTTCGGTTCATGTCAAGCTA+AGG | - | chr1.3:74653104-74653123 | MS.gene75183:CDS | 40.0% | |
| ! | AAGACACAAGCGAGATTTTG+AGG | - | chr1.3:74653970-74653989 | MS.gene75183:CDS | 40.0% |
| ! | ACCCTGATGAGGATTTTGTT+TGG | - | chr1.3:74651382-74651401 | MS.gene75183:intron | 40.0% |
| ! | AGCAGTTTGTTCAGAAGCAT+TGG | + | chr1.3:74654012-74654031 | None:intergenic | 40.0% |
| ! | ATTGAAGGCACAAAGGAAAG+AGG | - | chr1.3:74651002-74651021 | MS.gene75183:CDS | 40.0% |
| ! | CCACTTGACATTTTTGTTGC+AGG | - | chr1.3:74653737-74653756 | MS.gene75183:CDS | 40.0% |
| ! | GGAAGCATGTAGTGAAACAA+AGG | + | chr1.3:74651264-74651283 | None:intergenic | 40.0% |
| ! | GGTATAAGGAGTATGACACA+AGG | + | chr1.3:74652800-74652819 | None:intergenic | 40.0% |
| ! | TATCCAAAAGAAGAGCATGC+TGG | - | chr1.3:74652202-74652221 | MS.gene75183:CDS | 40.0% |
| ! | TGGCTTGTCCTGGAAAAAAA+AGG | + | chr1.3:74652928-74652947 | None:intergenic | 40.0% |
| !! | CCCTGATGAGGATTTTGTTT+GGG | - | chr1.3:74651383-74651402 | MS.gene75183:intron | 40.0% |
| !! | CGCATATGTTTTTCAGACTC+CGG | + | chr1.3:74652335-74652354 | None:intergenic | 40.0% |
| !! | GAGATTTTGAGGATGTTGCA+AGG | - | chr1.3:74653981-74654000 | MS.gene75183:CDS | 40.0% |
| !! | GCATATGTTTTTCAGACTCC+GGG | + | chr1.3:74652334-74652353 | None:intergenic | 40.0% |
| !! | GTCGATTTGATCGATCTCTT+TGG | - | chr1.3:74651304-74651323 | MS.gene75183:intron | 40.0% |
| !! | TCTTTCTGAGACAGAAAGCA+AGG | - | chr1.3:74651743-74651762 | MS.gene75183:CDS | 40.0% |
| !! | TGCGTCATGAGAAGCATTAT+AGG | - | chr1.3:74652351-74652370 | MS.gene75183:CDS | 40.0% |
| !! | TTTCTGTGCCTGATTTTGAC+TGG | - | chr1.3:74652971-74652990 | MS.gene75183:CDS | 40.0% |
| !!! | TGGGGAATTGGTTTTGGTTT+AGG | - | chr1.3:74652464-74652483 | MS.gene75183:CDS | 40.0% |
| AATGAGGGGAAAGGTTGTTC+TGG | - | chr1.3:74651890-74651909 | MS.gene75183:CDS | 45.0% | |
| ACATGCTGAAATGAGGGGAA+AGG | - | chr1.3:74651881-74651900 | MS.gene75183:CDS | 45.0% | |
| ACGAAGGAAAAGGACTATGG+AGG | + | chr1.3:74651482-74651501 | None:intergenic | 45.0% | |
| ACTGCACAAGCTGTTCAAGA+TGG | + | chr1.3:74652651-74652670 | None:intergenic | 45.0% | |
| AGAACCATGTTACGCTAGCA+TGG | - | chr1.3:74653357-74653376 | MS.gene75183:CDS | 45.0% | |
| AGATTTAACAGGGCAAGGCT+TGG | - | chr1.3:74651450-74651469 | MS.gene75183:intron | 45.0% | |
| AGCTATGGATTCCGCCTTAA+TGG | - | chr1.3:74652307-74652326 | MS.gene75183:CDS | 45.0% | |
| AGGTCAAACTGTGATGCTTG+GGG | - | chr1.3:74651791-74651810 | MS.gene75183:CDS | 45.0% | |
| ATAGTAGCGCTACAACGTAG+TGG | - | chr1.3:74653429-74653448 | MS.gene75183:CDS | 45.0% | |
| ATGGAAACAGCTTCAGCACT+AGG | + | chr1.3:74652632-74652651 | None:intergenic | 45.0% | |
| CATCCTCTCTTGAGAAATGG+AGG | + | chr1.3:74650959-74650978 | None:intergenic | 45.0% | |
| CATCTCTAACAGGAAGGGTT+CGG | + | chr1.3:74651515-74651534 | None:intergenic | 45.0% | |
| CGATACAACACTCCAGAGTT+GGG | - | chr1.3:74652040-74652059 | MS.gene75183:intron | 45.0% | |
| CTCCTGTTGCAGTAGAATGT+TGG | - | chr1.3:74651605-74651624 | MS.gene75183:intron | 45.0% | |
| CTCTCTTGAGAAATGGAGGA+CGG | + | chr1.3:74650955-74650974 | None:intergenic | 45.0% | |
| CTTCTTGCAGGATCTGGAAA+GGG | - | chr1.3:74652412-74652431 | MS.gene75183:CDS | 45.0% | |
| CTTGTAGAGATCATCTGAGG+AGG | - | chr1.3:74652435-74652454 | MS.gene75183:CDS | 45.0% | |
| CTTGTTACAGCAGTGAGAGA+TGG | - | chr1.3:74652098-74652117 | MS.gene75183:CDS | 45.0% | |
| CTTTCGGTCGTGAGAAGAAA+AGG | - | chr1.3:74650851-74650870 | MS.gene75183:CDS | 45.0% | |
| GAAGAAAAGGCTTCCAAGAG+TGG | - | chr1.3:74650864-74650883 | MS.gene75183:CDS | 45.0% | |
| GGAAGTTATCAACCCTGATG+AGG | - | chr1.3:74651371-74651390 | MS.gene75183:intron | 45.0% | |
| GGACAAGCCATACTGAAGAA+TGG | - | chr1.3:74652938-74652957 | MS.gene75183:CDS | 45.0% | |
| GGTTCATGACTACCACTTGA+TGG | - | chr1.3:74651404-74651423 | MS.gene75183:intron | 45.0% | |
| GTACGCACGATGTTGCATAT+TGG | - | chr1.3:74652381-74652400 | MS.gene75183:CDS | 45.0% | |
| TAGTGAAAAGCTCAGGTGGA+AGG | + | chr1.3:74651206-74651225 | None:intergenic | 45.0% | |
| TCAAATCGACCACCAAGATC+AGG | + | chr1.3:74651294-74651313 | None:intergenic | 45.0% | |
| TCCCAACATTCTACTGCAAC+AGG | + | chr1.3:74651610-74651629 | None:intergenic | 45.0% | |
| TCGATACAACACTCCAGAGT+TGG | - | chr1.3:74652039-74652058 | MS.gene75183:intron | 45.0% | |
| TGATGCTGTTGCTGAAGCTA+TGG | - | chr1.3:74652292-74652311 | MS.gene75183:CDS | 45.0% | |
| TGCTAGCGTAACATGGTTCT+AGG | + | chr1.3:74653357-74653376 | None:intergenic | 45.0% | |
| TGGTAACCAGCTTCCATTGA+AGG | - | chr1.3:74650987-74651006 | MS.gene75183:CDS | 45.0% | |
| TTCTTCTCACGACCGAAAGA+CGG | + | chr1.3:74650850-74650869 | None:intergenic | 45.0% | |
| TTGTTGCAGGGTGTGAGTAA+GGG | - | chr1.3:74653750-74653769 | MS.gene75183:CDS | 45.0% | |
| TTTGTGCCTTCAATGGAAGC+TGG | + | chr1.3:74650996-74651015 | None:intergenic | 45.0% | |
| TTTGTTGCAGGGTGTGAGTA+AGG | - | chr1.3:74653749-74653768 | MS.gene75183:CDS | 45.0% | |
| ! | AGCTTCCATTGAAGGCACAA+AGG | - | chr1.3:74650995-74651014 | MS.gene75183:CDS | 45.0% |
| ! | AGGAAGGGTTCGGTATATCT+CGG | + | chr1.3:74651505-74651524 | None:intergenic | 45.0% |
| ! | CTGGTGGTGTCTGAATTCAT+TGG | - | chr1.3:74652221-74652240 | MS.gene75183:CDS | 45.0% |
| ! | GATTCATGACTGACTCAAGC+TGG | + | chr1.3:74651725-74651744 | None:intergenic | 45.0% |
| ! | GGTGTTGCACTAATTGATCC+AGG | + | chr1.3:74652611-74652630 | None:intergenic | 45.0% |
| ! | TGGTGATGACAGATCAGATG+AGG | - | chr1.3:74653842-74653861 | MS.gene75183:CDS | 45.0% |
| ! | TTCTTCAGTATGGCTTGTCC+TGG | + | chr1.3:74652938-74652957 | None:intergenic | 45.0% |
| !! | AGATGCTGGGGAATTGGTTT+TGG | - | chr1.3:74652458-74652477 | MS.gene75183:CDS | 45.0% |
| !! | CAACACTGGCTTGAAGTAGT+TGG | - | chr1.3:74653592-74653611 | MS.gene75183:CDS | 45.0% |
| !!! | GGGCCACTTTTAACTGAAAC+AGG | + | chr1.3:74653168-74653187 | None:intergenic | 45.0% |
| AACGACACATTTGGAAGGCC+TGG | - | chr1.3:74651996-74652015 | MS.gene75183:intron | 50.0% | |
| AAGACCTATGTAGCCTCGCT+TGG | + | chr1.3:74651646-74651665 | None:intergenic | 50.0% | |
| AAGCGATTCTCTCCCAACTC+TGG | + | chr1.3:74652055-74652074 | None:intergenic | 50.0% | |
| AATCGCGCCGCTTAATGATG+GGG | + | chr1.3:74652252-74652271 | None:intergenic | 50.0% | |
| AGCTCAGGTGGAAGGAAAGT+TGG | + | chr1.3:74651198-74651217 | None:intergenic | 50.0% | |
| ATCATCTGAGGAGGAGATGC+TGG | - | chr1.3:74652444-74652463 | MS.gene75183:CDS | 50.0% | |
| ATCATTAAGCGGCGCGATTC+GGG | - | chr1.3:74652253-74652272 | MS.gene75183:CDS | 50.0% | |
| CAAATCGCAAACCCTGCTAG+AGG | - | chr1.3:74651915-74651934 | MS.gene75183:intron | 50.0% | |
| CAAGGAAACACGTCCGCAAT+GGG | + | chr1.3:74653909-74653928 | None:intergenic | 50.0% | |
| CAATCCAAGCGAGGCTACAT+AGG | - | chr1.3:74651639-74651658 | MS.gene75183:intron | 50.0% | |
| CATCATTAAGCGGCGCGATT+CGG | - | chr1.3:74652252-74652271 | MS.gene75183:CDS | 50.0% | |
| CGGACGAAGGAAAAGGACTA+TGG | + | chr1.3:74651485-74651504 | None:intergenic | 50.0% | |
| CGTCCTCCATTTCTCAAGAG+AGG | - | chr1.3:74650953-74650972 | MS.gene75183:CDS | 50.0% | |
| CTTCTTGCACATCCTTTCCG+CGG | + | chr1.3:74651941-74651960 | None:intergenic | 50.0% | |
| GAATCGCGCCGCTTAATGAT+GGG | + | chr1.3:74652253-74652272 | None:intergenic | 50.0% | |
| GATAGTACTATGGTGCAGCC+TGG | - | chr1.3:74652590-74652609 | MS.gene75183:CDS | 50.0% | |
| GCTTCTTGCAGGATCTGGAA+AGG | - | chr1.3:74652411-74652430 | MS.gene75183:CDS | 50.0% | |
| GGGCTTGTAGAGATCATCTG+AGG | - | chr1.3:74652432-74652451 | MS.gene75183:CDS | 50.0% | |
| GTGGGAATTCACTTGGGATG+AGG | - | chr1.3:74651035-74651054 | MS.gene75183:CDS | 50.0% | |
| GTTCGGTATATCTCGGACGA+AGG | + | chr1.3:74651498-74651517 | None:intergenic | 50.0% | |
| TCAAACTGTGATGCTTGGGG+TGG | - | chr1.3:74651794-74651813 | MS.gene75183:CDS | 50.0% | |
| TCATCTGAGGAGGAGATGCT+GGG | - | chr1.3:74652445-74652464 | MS.gene75183:CDS | 50.0% | |
| TTCAGACTCCGGGACCATTA+AGG | + | chr1.3:74652324-74652343 | None:intergenic | 50.0% | |
| ! | CCAAAAGAAGAGCATGCTGG+TGG | - | chr1.3:74652205-74652224 | MS.gene75183:CDS | 50.0% |
| ! | CCAAACCAGAGCACTCTCTT+TGG | + | chr1.3:74653061-74653080 | None:intergenic | 50.0% |
| ! | CCACCAGCATGCTCTTCTTT+TGG | + | chr1.3:74652208-74652227 | None:intergenic | 50.0% |
| ! | GGTTTTTGACCAACGGTGCA+AGG | + | chr1.3:74653927-74653946 | None:intergenic | 50.0% |
| !! | AGAGTCCAAAGAGAGTGCTC+TGG | - | chr1.3:74653053-74653072 | MS.gene75183:CDS | 50.0% |
| !! | CAAAAGAATCGCTCGGTGCT+TGG | + | chr1.3:74652564-74652583 | None:intergenic | 50.0% |
| !! | CCAAAGAGAGTGCTCTGGTT+TGG | - | chr1.3:74653058-74653077 | MS.gene75183:CDS | 50.0% |
| !! | CTTGGACTTGCTGCAGAACA+CGG | - | chr1.3:74652749-74652768 | MS.gene75183:CDS | 50.0% |
| !!! | CAAGCACCGAGCGATTCTTT+TGG | - | chr1.3:74652562-74652581 | MS.gene75183:CDS | 50.0% |
| AGACTCCGGGACCATTAAGG+CGG | + | chr1.3:74652321-74652340 | None:intergenic | 55.0% | |
| AGGAGGAGATGCTGGGGAAT+TGG | - | chr1.3:74652452-74652471 | MS.gene75183:CDS | 55.0% | |
| CATCTGAGGAGGAGATGCTG+GGG | - | chr1.3:74652446-74652465 | MS.gene75183:CDS | 55.0% | |
| CCAAGAGTGGCAACTGTTGC+TGG | - | chr1.3:74650877-74650896 | MS.gene75183:CDS | 55.0% | |
| CCAGCAACAGTTGCCACTCT+TGG | + | chr1.3:74650880-74650899 | None:intergenic | 55.0% | |
| CGAATCGCGCCGCTTAATGA+TGG | + | chr1.3:74652254-74652273 | None:intergenic | 55.0% | |
| GACGTGTTTCCTTGCACCGT+TGG | - | chr1.3:74653915-74653934 | MS.gene75183:CDS | 55.0% | |
| GATGCTTGGGGTGGATGACA+TGG | - | chr1.3:74651803-74651822 | MS.gene75183:CDS | 55.0% | |
| GCAAGGAAACACGTCCGCAA+TGG | + | chr1.3:74653910-74653929 | None:intergenic | 55.0% | |
| GCGTAGCTTCTTGCAGGATC+TGG | - | chr1.3:74652406-74652425 | MS.gene75183:CDS | 55.0% | |
| GGATTCCGCCTTAATGGTCC+CGG | - | chr1.3:74652313-74652332 | MS.gene75183:CDS | 55.0% | |
| GGCATCTCTATCGCCCATTG+CGG | - | chr1.3:74653893-74653912 | MS.gene75183:CDS | 55.0% | |
| GGCTGCTCCCCATCATTAAG+CGG | - | chr1.3:74652242-74652261 | MS.gene75183:CDS | 55.0% | |
| TCGGCCATGCTAGCGTAACA+TGG | + | chr1.3:74653364-74653383 | None:intergenic | 55.0% | |
| CCACCAAGATCAGGCGACAG+CGG | + | chr1.3:74651285-74651304 | None:intergenic | 60.0% | |
| CTTCCGCTGTCGCCTGATCT+TGG | - | chr1.3:74651279-74651298 | MS.gene75183:intron | 60.0% | |
| TCATGCGGCTCGCCGTCTTT+CGG | - | chr1.3:74650835-74650854 | MS.gene75183:CDS | 60.0% | |
| TTGGGCGCGTAGCTTCTTGC+AGG | - | chr1.3:74652400-74652419 | MS.gene75183:CDS | 60.0% | |
| CCGCTGTCGCCTGATCTTGG+TGG | - | chr1.3:74651282-74651301 | MS.gene75183:intron | 65.0% | |
| CCTTTCCGCGGCCTCTAGCA+GGG | + | chr1.3:74651929-74651948 | None:intergenic | 65.0% | |
| GCAAACCCTGCTAGAGGCCG+CGG | - | chr1.3:74651921-74651940 | MS.gene75183:intron | 65.0% | |
| TCCTTTCCGCGGCCTCTAGC+AGG | + | chr1.3:74651930-74651949 | None:intergenic | 65.0% | |
| ! | GCGCGATTCGGGTGAATCCG+TGG | - | chr1.3:74652264-74652283 | MS.gene75183:CDS | 65.0% |
| CCCTGCTAGAGGCCGCGGAA+AGG | - | chr1.3:74651926-74651945 | MS.gene75183:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 74650796 | 74654064 | 74650796 | ID=MS.gene75183 |
| chr1.3 | mRNA | 74650796 | 74654064 | 74650796 | ID=MS.gene75183.t1;Parent=MS.gene75183 |
| chr1.3 | exon | 74652077 | 74654064 | 74652077 | ID=MS.gene75183.t1.exon1;Parent=MS.gene75183.t1 |
| chr1.3 | CDS | 74652077 | 74654064 | 74652077 | ID=cds.MS.gene75183.t1;Parent=MS.gene75183.t1 |
| chr1.3 | exon | 74651648 | 74651921 | 74651648 | ID=MS.gene75183.t1.exon2;Parent=MS.gene75183.t1 |
| chr1.3 | CDS | 74651648 | 74651921 | 74651648 | ID=cds.MS.gene75183.t1;Parent=MS.gene75183.t1 |
| chr1.3 | exon | 74650796 | 74651101 | 74650796 | ID=MS.gene75183.t1.exon3;Parent=MS.gene75183.t1 |
| chr1.3 | CDS | 74650796 | 74651101 | 74650796 | ID=cds.MS.gene75183.t1;Parent=MS.gene75183.t1 |
| Gene Sequence |
| Protein sequence |
