AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038603


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038603.t1 MTR_8g063790 99.416 856 5 0 1 856 1 856 0.0 1766
MS.gene038603.t1 MTR_1g109620 66.627 845 274 2 1 839 1 843 0.0 1191
MS.gene038603.t1 MTR_4g080160 63.466 854 297 3 1 841 1 852 0.0 1150
MS.gene038603.t1 MTR_8g105740 65.258 852 280 7 1 839 1 849 0.0 1149
MS.gene038603.t1 MTR_1g032730 63.934 854 292 6 1 840 1 852 0.0 1131
MS.gene038603.t1 MTR_4g129270 62.247 792 289 5 52 839 55 840 0.0 1036
MS.gene038603.t1 MTR_4g129270 63.338 701 251 4 52 748 55 753 0.0 930
MS.gene038603.t1 MTR_3g078210 60.053 751 299 1 77 827 3 752 0.0 926
MS.gene038603.t1 MTR_3g467030 54.348 598 243 3 56 653 2 569 0.0 625
MS.gene038603.t1 MTR_2g073260 34.207 763 426 21 52 787 122 835 1.43e-134 425
MS.gene038603.t1 MTR_0034s0170 34.165 802 434 23 52 814 83 829 5.42e-132 417
MS.gene038603.t1 MTR_8g087910 36.023 347 199 5 36 374 53 384 8.82e-68 231
MS.gene038603.t1 MTR_3g076810 51.955 179 72 4 8 186 6 170 7.82e-52 179
MS.gene038603.t1 MTR_8g087930 30.892 437 248 13 381 800 10 409 3.81e-50 185
MS.gene038603.t1 MTR_3g467040 56.075 107 47 0 477 583 110 216 7.12e-33 127
MS.gene038603.t1 MTR_3g467040 48.624 109 56 0 302 410 1 109 3.13e-27 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038603.t1 AT1G23870 74.510 867 209 3 1 855 1 867 0.0 1370
MS.gene038603.t1 AT1G70290 72.992 859 225 3 1 855 1 856 0.0 1338
MS.gene038603.t1 AT1G60140 72.242 861 233 1 1 855 1 861 0.0 1331
MS.gene038603.t1 AT1G60140 72.242 861 233 1 1 855 1 861 0.0 1331
MS.gene038603.t1 AT1G60140 72.242 861 233 1 1 855 1 861 0.0 1331
MS.gene038603.t1 AT1G60140 72.242 861 233 1 1 855 1 861 0.0 1331
MS.gene038603.t1 AT1G60140 72.242 861 233 1 1 855 1 861 0.0 1331
MS.gene038603.t1 AT1G70290 68.685 859 224 4 1 855 1 818 0.0 1241
MS.gene038603.t1 AT1G60140 73.580 757 194 1 1 751 1 757 0.0 1195
MS.gene038603.t1 AT4G17770 64.852 845 289 2 1 838 1 844 0.0 1177
MS.gene038603.t1 AT4G17770 64.852 845 289 2 1 838 1 844 0.0 1177
MS.gene038603.t1 AT1G68020 64.019 856 291 4 1 839 1 856 0.0 1156
MS.gene038603.t1 AT1G68020 64.019 856 291 4 1 839 1 856 0.0 1156
MS.gene038603.t1 AT1G06410 63.077 845 296 4 1 837 1 837 0.0 1126
MS.gene038603.t1 AT1G06410 63.077 845 296 4 1 837 1 837 0.0 1126
MS.gene038603.t1 AT1G06410 63.077 845 296 4 1 837 1 837 0.0 1126
MS.gene038603.t1 AT2G18700 60.327 857 326 6 1 851 1 849 0.0 1080
MS.gene038603.t1 AT1G68020 63.476 679 231 4 1 662 1 679 0.0 915
MS.gene038603.t1 AT1G16980 35.688 807 458 24 48 834 7 772 7.05e-146 451
MS.gene038603.t1 AT4G27550 33.052 829 469 22 51 838 2 785 2.38e-133 417
MS.gene038603.t1 AT4G27550 32.931 829 477 22 52 838 3 794 1.25e-132 416
MS.gene038603.t1 AT1G78580 33.805 778 432 20 52 800 91 814 2.70e-132 419
MS.gene038603.t1 AT1G78580 33.805 778 432 20 52 800 91 814 2.70e-132 419
MS.gene038603.t1 AT1G78580 33.805 778 432 20 52 800 91 814 2.70e-132 419
MS.gene038603.t1 AT1G78580 33.805 778 432 20 52 800 91 814 2.70e-132 419
MS.gene038603.t1 AT1G16980 35.266 638 362 18 48 675 7 603 1.43e-118 374

Find 205 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACTTCACCCTGCAAATT+TGG 0.106547 8.3:-38517448 None:intergenic
TGGGGAATTGGTCTGGGCTT+GGG 0.169334 8.3:+38518027 MS.gene038603:CDS
AAAAGGATCAATGAAATTTA+TGG 0.184333 8.3:+38517550 MS.gene038603:CDS
CTGGGGAATTGGTCTGGGCT+TGG 0.187166 8.3:+38518026 MS.gene038603:CDS
CAAGATGCAGACCCTGATTT+TGG 0.207528 8.3:+38518583 MS.gene038603:CDS
CCAAGGGTTATGACTGTTCC+TGG 0.261011 8.3:+38516458 MS.gene038603:CDS
ATAAATTTCATTGATCCTTT+TGG 0.261126 8.3:-38517548 None:intergenic
GGGGAATTGGTCTGGGCTTG+GGG 0.266295 8.3:+38518028 MS.gene038603:CDS
ATAAATCCTGCAAGGGGTTC+AGG 0.270561 8.3:+38517484 MS.gene038603:CDS
TTGAGAATTTCATCCCTTAC+TGG 0.274615 8.3:-38517085 None:intergenic
CTCTAAGCTAAAAGAGATTC+AGG 0.278734 8.3:+38517321 MS.gene038603:CDS
CTTCTCTGAGTGGGGCCATC+AGG 0.282889 8.3:+38517815 MS.gene038603:CDS
AAAGATAAGAAAGTTATTCT+TGG 0.285155 8.3:+38517352 MS.gene038603:CDS
CTGGAATTGGGCAAGATGTT+TGG 0.285774 8.3:-38519090 None:intergenic
GAATCAGATGTTAGTTCTTC+TGG 0.292836 8.3:+38516503 MS.gene038603:CDS
GCAAAGATCATTATACTAAA+AGG 0.294692 8.3:+38518001 MS.gene038603:CDS
CAAGTGGTCCAGCAATTCTT+TGG 0.301605 8.3:-38518617 None:intergenic
ATAACCCTTGGAAGACTTCT+TGG 0.323153 8.3:-38516446 None:intergenic
TGAGAAGGTTCTCTTGAATA+TGG 0.324266 8.3:+38518836 MS.gene038603:CDS
TACTCATGATGTGGCATATT+GGG 0.324520 8.3:+38517945 MS.gene038603:CDS
TCCCATCATCTGAAATTTAC+CGG 0.324934 8.3:+38517056 MS.gene038603:CDS
CAGCAATTCTTTGGCTTGGC+AGG 0.325831 8.3:-38518608 None:intergenic
CAACTTCACCCTGCAAATTT+GGG 0.326749 8.3:-38517447 None:intergenic
CACGAAATCTGGTGGATTAC+CGG 0.327222 8.3:-38518865 None:intergenic
TCCTTCCCTGAACCCCTTGC+AGG 0.330095 8.3:-38517490 None:intergenic
AATATTGTGTTCATTGTTAG+TGG 0.330780 8.3:+38518243 MS.gene038603:CDS
TTTAGTATAATGATCTTTGC+AGG 0.332751 8.3:-38517998 None:intergenic
GCTTGGCAGGAGCCAAAATC+AGG 0.332771 8.3:-38518595 None:intergenic
ACTAAAAGGTGCTGGGGAAT+TGG 0.344491 8.3:+38518015 MS.gene038603:CDS
TCTCAAAAGAAACCTGGAAT+TGG 0.347950 8.3:-38519103 None:intergenic
AAGGTGCTGGGGAATTGGTC+TGG 0.348234 8.3:+38518020 MS.gene038603:CDS
TGGAATTGGGCAAGATGTTT+GGG 0.350397 8.3:-38519089 None:intergenic
CTTGTTGTGTCTGAGTTCAT+TGG 0.350593 8.3:+38517784 MS.gene038603:CDS
GAGATATTGATACTGCTAAA+TGG 0.353153 8.3:+38516579 MS.gene038603:CDS
CCAATGCACATCACGAAATC+TGG 0.354845 8.3:-38518876 None:intergenic
CGATTTCATCGAGTTAAACT+TGG 0.356832 8.3:+38517013 MS.gene038603:CDS
GGGTTCAGGGAAGGATGTTC+AGG 0.357166 8.3:+38517498 MS.gene038603:CDS
TTGTTGAATTCGGATTTAAT+TGG 0.359446 8.3:+38517112 MS.gene038603:CDS
ATTTGTTTGCGGATCTTGAT+TGG 0.360978 8.3:+38518467 MS.gene038603:CDS
TTAAGCACAGATATGACTTC+AGG 0.363121 8.3:-38518198 None:intergenic
GGGATTATTTCTGACCTTGA+TGG 0.367224 8.3:+38516479 MS.gene038603:CDS
CTGCCAAGCCAAAGAATTGC+TGG 0.368870 8.3:+38518609 MS.gene038603:CDS
TCTCAAAGGATTGTTGAATT+CGG 0.369451 8.3:+38517102 MS.gene038603:CDS
CATACAAAAGAACTAGTAGA+AGG 0.371718 8.3:+38518112 MS.gene038603:CDS
ATAAGCACTCTTCTCGAAAC+GGG 0.382221 8.3:-38517617 None:intergenic
TTTAGCTTAGAGGATGTAGA+AGG 0.386302 8.3:-38517310 None:intergenic
AGCATATGGGTAGCATATAA+TGG 0.386638 8.3:-38516832 None:intergenic
CAAACATCTTGCCCAATTCC+AGG 0.387739 8.3:+38519091 MS.gene038603:CDS
GGGCCATCAGGGTCAATCCC+TGG 0.389275 8.3:+38517827 MS.gene038603:CDS
TAACCCTTGGAAGACTTCTT+GGG 0.392932 8.3:-38516445 None:intergenic
TATGAATTTAGCCCTCAGTA+TGG 0.393080 8.3:+38517873 MS.gene038603:CDS
ATTCTATTACAATTAAAAGA+TGG 0.393081 8.3:+38516626 MS.gene038603:CDS
GCAGCAGAACCCAAATTTGC+AGG 0.398626 8.3:+38517438 MS.gene038603:CDS
GATGTTGTAAAGTTGCTTGA+TGG 0.401203 8.3:+38519041 MS.gene038603:CDS
CTGCAAACAATATATTTGTA+TGG 0.405626 8.3:-38517697 None:intergenic
GAATCTAAGCGCGGACATAT+AGG 0.407020 8.3:+38517202 MS.gene038603:CDS
CTTCTCAGCTACCAAACCTT+TGG 0.411552 8.3:-38518820 None:intergenic
GCCATCTTTCTTGATTATGA+TGG 0.412733 8.3:+38518135 MS.gene038603:CDS
ATCATTATACTAAAAGGTGC+TGG 0.413565 8.3:+38518007 MS.gene038603:CDS
GTTGTTCACCTTCTCTGAGT+GGG 0.416077 8.3:+38517806 MS.gene038603:CDS
TTCTATTACAATTAAAAGAT+GGG 0.419809 8.3:+38516627 MS.gene038603:CDS
GTCCGGTAAATTTCAGATGA+TGG 0.420016 8.3:-38517058 None:intergenic
ATCACCATGATCTGAGCATA+TGG 0.421283 8.3:-38516846 None:intergenic
CTCAAAAGAAACCTGGAATT+GGG 0.424009 8.3:-38519102 None:intergenic
TGAAATTGCTCAGAGATTAC+TGG 0.424931 8.3:+38516718 MS.gene038603:CDS
GTACTCATGATGTGGCATAT+TGG 0.429323 8.3:+38517944 MS.gene038603:CDS
CAAGAGATTCTCTGAATGAA+TGG 0.436703 8.3:+38518271 MS.gene038603:CDS
CAATATATTTGTATGGGACT+AGG 0.441769 8.3:-38517690 None:intergenic
CTGCTAAATGGTGTTTCAGT+TGG 0.444648 8.3:+38516591 MS.gene038603:CDS
CAAATATATTGTTTGCAGAC+AGG 0.445837 8.3:+38517702 MS.gene038603:CDS
CTTTGACCGAGTGCTTTGGC+AGG 0.445978 8.3:+38516871 MS.gene038603:CDS
TTTACCGGACTTTGCCAGTA+AGG 0.446014 8.3:+38517071 MS.gene038603:CDS
CAGACAGGGAACTGCAAAGC+TGG 0.446931 8.3:+38517717 MS.gene038603:CDS
ATGTTAGTTCTTCTGGATGT+CGG 0.447873 8.3:+38516510 MS.gene038603:CDS
CTGCAGGTCATGGGGTAGAA+AGG 0.448467 8.3:-38516762 None:intergenic
GGTGGAATAGCGACTCTGAA+TGG 0.451271 8.3:+38518434 MS.gene038603:intron
ATCGCTTTGACCGAGTGCTT+TGG 0.451315 8.3:+38516867 MS.gene038603:CDS
TGCGGATCTTGATTGGAAAC+AGG 0.453319 8.3:+38518474 MS.gene038603:CDS
CATATAGGACTTGATTACTT+TGG 0.456053 8.3:+38517217 MS.gene038603:CDS
ACAGGGAGTAACCAAAGGTT+TGG 0.457006 8.3:+38518809 MS.gene038603:intron
GTTTACATCATGCAAACTGC+TGG 0.460290 8.3:+38518293 MS.gene038603:CDS
CCAGATTTCGTGATGTGCAT+TGG 0.463267 8.3:+38518876 MS.gene038603:CDS
GGCAAACATGTTGCCGCTGC+AGG 0.463803 8.3:+38516550 MS.gene038603:CDS
TGAAGTCAAGGAAAGTGCTT+TGG 0.467204 8.3:+38518549 MS.gene038603:CDS
TAAATCCTGCAAGGGGTTCA+GGG 0.467451 8.3:+38517485 MS.gene038603:CDS
CACAGATATGACTTCAGGGC+TGG 0.467927 8.3:-38518193 None:intergenic
TGTTAGTTCTTCTGGATGTC+GGG 0.472937 8.3:+38516511 MS.gene038603:CDS
CAAAGGTTTGGTAGCTGAGA+AGG 0.472991 8.3:+38518821 MS.gene038603:CDS
AGGTGCTGGGGAATTGGTCT+GGG 0.473831 8.3:+38518021 MS.gene038603:CDS
CTGTGCTCTCAAAAGAAACC+TGG 0.476062 8.3:-38519109 None:intergenic
AGAGTTATTTCACTTTCTCA+TGG 0.477242 8.3:+38518054 MS.gene038603:CDS
CTGCAGTAGAATGCTAGGTC+TGG 0.477809 8.3:+38517174 MS.gene038603:CDS
AAGCTTATTTAATTGCCAAA+AGG 0.478363 8.3:+38517533 MS.gene038603:CDS
GTTGCATCGTCAATGCTGTA+AGG 0.478965 8.3:+38517656 MS.gene038603:CDS
TTCTCTGAGTGGGGCCATCA+GGG 0.481545 8.3:+38517816 MS.gene038603:CDS
ATGAATTTAGCCCTCAGTAT+GGG 0.482655 8.3:+38517874 MS.gene038603:CDS
CAAGGGTTATGACTGTTCCT+GGG 0.488044 8.3:+38516459 MS.gene038603:CDS
CAAAGAATTGCTGGACCACT+TGG 0.490557 8.3:+38518618 MS.gene038603:CDS
TCTTGCTGCAGTAGAATGCT+AGG 0.494534 8.3:+38517169 MS.gene038603:CDS
TTGTGTTCATTGTTAGTGGA+AGG 0.496110 8.3:+38518247 MS.gene038603:CDS
AGCAACTGCATCTATATCCC+AGG 0.496254 8.3:-38517845 None:intergenic
TCCGGTAAATTTCAGATGAT+GGG 0.500703 8.3:-38517057 None:intergenic
TCAAATTATAAATCCTGCAA+GGG 0.500735 8.3:+38517477 MS.gene038603:CDS
TCTGTATACGACTGCATGAC+AGG 0.500792 8.3:-38518505 None:intergenic
GGTCCAGCAATTCTTTGGCT+TGG 0.501011 8.3:-38518612 None:intergenic
ACCCAAACAAAATCATCATC+GGG 0.501271 8.3:-38516947 None:intergenic
TGCTAAATGGTGTTTCAGTT+GGG 0.502656 8.3:+38516592 MS.gene038603:CDS
CATCCCTTACTGGCAAAGTC+CGG 0.504874 8.3:-38517075 None:intergenic
CTCTTGAATATGGTTAATGC+CGG 0.507275 8.3:+38518846 MS.gene038603:CDS
AATAAGCACTCTTCTCGAAA+CGG 0.515130 8.3:-38517618 None:intergenic
CTACCCATATGCTCAGATCA+TGG 0.515637 8.3:+38516842 MS.gene038603:CDS
AACCCAAACAAAATCATCAT+CGG 0.516929 8.3:-38516948 None:intergenic
GAACCAGCAATTGTTAAAAG+AGG 0.517681 8.3:+38518658 MS.gene038603:CDS
ACAGATATGACTTCAGGGCT+GGG 0.520588 8.3:-38518192 None:intergenic
GTGGAATAGCGACTCTGAAT+GGG 0.520863 8.3:+38518435 MS.gene038603:CDS
AAATATATTGTTTGCAGACA+GGG 0.522683 8.3:+38517703 MS.gene038603:CDS
ATGGTGTTTCAGTTGGGATG+AGG 0.523696 8.3:+38516598 MS.gene038603:CDS
TAAGCACAGATATGACTTCA+GGG 0.524391 8.3:-38518197 None:intergenic
GGCCATCAGGGTCAATCCCT+GGG 0.525071 8.3:+38517828 MS.gene038603:CDS
GTTCTTCTGGATGTCGGGAG+CGG 0.526826 8.3:+38516516 MS.gene038603:CDS
TCATTATACTAAAAGGTGCT+GGG 0.528112 8.3:+38518008 MS.gene038603:CDS
TGCTGATACAATATGGTCAA+TGG 0.528241 8.3:-38518091 None:intergenic
GGAAACAAGTCATTTGTTTG+CGG 0.528499 8.3:+38518456 MS.gene038603:CDS
TTCAAATTATAAATCCTGCA+AGG 0.529329 8.3:+38517476 MS.gene038603:CDS
ATCGTCAATGCTGTAAGGGA+TGG 0.532615 8.3:+38517661 MS.gene038603:CDS
TGGATCTAATATTGAAGTCA+AGG 0.535654 8.3:+38518537 MS.gene038603:CDS
TGAGATAGATGCTAGTGAGC+AGG 0.537498 8.3:+38516694 MS.gene038603:CDS
CCAGGAACAGTCATAACCCT+TGG 0.540553 8.3:-38516458 None:intergenic
GCTTAACTTCAACAATATGC+TGG 0.541548 8.3:-38518681 None:intergenic
CAATCTGAAATTTCTAGCTG+TGG 0.541729 8.3:+38517405 MS.gene038603:CDS
GCCATCATAATCAAGAAAGA+TGG 0.544414 8.3:-38518136 None:intergenic
TTGTTCACCTTCTCTGAGTG+GGG 0.546280 8.3:+38517807 MS.gene038603:CDS
TGTGTTCATTGTTAGTGGAA+GGG 0.547481 8.3:+38518248 MS.gene038603:CDS
TATTGTTGAAGTTAAGCCAC+AGG 0.548984 8.3:+38518687 MS.gene038603:CDS
CAGATATGACTTCAGGGCTG+GGG 0.549497 8.3:-38518191 None:intergenic
CTGGGACTTGCAGCTGAACA+TGG 0.550416 8.3:+38518312 MS.gene038603:CDS
AATCGTTTCCTCAAGAAAGT+AGG 0.550967 8.3:-38516995 None:intergenic
TAAGAAAGTTATTCTTGGTG+TGG 0.551636 8.3:+38517357 MS.gene038603:CDS
TGAATTTAGCCCTCAGTATG+GGG 0.553092 8.3:+38517875 MS.gene038603:CDS
TGCAAACAATATATTTGTAT+GGG 0.553617 8.3:-38517696 None:intergenic
GGAAGACTTCTTGGGGTGTG+AGG 0.553746 8.3:-38516437 None:intergenic
TGCAAAGCTGGATGAAGCTG+TGG 0.555064 8.3:+38517729 MS.gene038603:CDS
AGCATCTATCTCAACCTTGA+GGG 0.558399 8.3:-38516684 None:intergenic
TTACCGGACTTTGCCAGTAA+GGG 0.558832 8.3:+38517072 MS.gene038603:CDS
CATAAGCCTGCCAAAGCACT+CGG 0.561670 8.3:-38516877 None:intergenic
TGATACTGAGGTAATCTATG+TGG 0.564061 8.3:+38516658 MS.gene038603:CDS
TCACCATGATCTGAGCATAT+GGG 0.565672 8.3:-38516845 None:intergenic
GAGCGGTCAATGATAATGAC+TGG 0.567271 8.3:-38517589 None:intergenic
TCAAGGTCAGAAATAATCCC+AGG 0.567364 8.3:-38516476 None:intergenic
TCCTGCAAGGGGTTCAGGGA+AGG 0.568476 8.3:+38517489 MS.gene038603:CDS
GGTTGTTCACCTTCTCTGAG+TGG 0.569153 8.3:+38517805 MS.gene038603:CDS
GATTTCATCGAGTTAAACTT+GGG 0.570858 8.3:+38517014 MS.gene038603:CDS
CAGGATTTATAATTTGAACA+AGG 0.572858 8.3:-38517471 None:intergenic
AATATTTGCAGACAAAGTCA+TGG 0.573166 8.3:+38516913 MS.gene038603:CDS
GATACTGAGGTAATCTATGT+GGG 0.575365 8.3:+38516659 MS.gene038603:CDS
TATTCTTGGTGTGGACGACA+TGG 0.577773 8.3:+38517366 MS.gene038603:CDS
AGATATGACTTCAGGGCTGG+GGG 0.578681 8.3:-38518190 None:intergenic
AATCTATGTGGGTTCCCTCA+AGG 0.580394 8.3:+38516670 MS.gene038603:CDS
CATATCGATAGTGTTTCTCA+TGG 0.584215 8.3:-38517918 None:intergenic
TCTTTACAGGGAGTAACCAA+AGG 0.585367 8.3:+38518804 MS.gene038603:intron
TTTGATTTGTTGAGGTAGCG+AGG 0.586241 8.3:-38519064 None:intergenic
CGGTAGGAATTCACATGGGT+AGG 0.588120 8.3:+38517266 MS.gene038603:CDS
ATCCCAGGGATTGACCCTGA+TGG 0.588505 8.3:-38517830 None:intergenic
ATACAAAAGAACTAGTAGAA+GGG 0.590862 8.3:+38518113 MS.gene038603:CDS
AACCCTTGGAAGACTTCTTG+GGG 0.592251 8.3:-38516444 None:intergenic
TCGTATACAGAAGCAACTGA+TGG 0.593251 8.3:+38518517 MS.gene038603:CDS
ACACCCCAAGAAGTCTTCCA+AGG 0.595682 8.3:+38516441 MS.gene038603:CDS
CTACCCATGTGAATTCCTAC+CGG 0.597503 8.3:-38517265 None:intergenic
CGGGAGCTGATGGTAACGAC+GGG 0.607532 8.3:-38518953 None:intergenic
TAGCATCTATCTCAACCTTG+AGG 0.607564 8.3:-38516685 None:intergenic
TAAATTTCAGATGATGGGAA+AGG 0.607697 8.3:-38517052 None:intergenic
GTAAGGGATGAAATTCTCAA+AGG 0.608917 8.3:+38517088 MS.gene038603:CDS
CAAATTATAAATCCTGCAAG+GGG 0.610053 8.3:+38517478 MS.gene038603:CDS
TTTACATCATGCAAACTGCT+GGG 0.611466 8.3:+38518294 MS.gene038603:CDS
ATGCACATCACGAAATCTGG+TGG 0.613992 8.3:-38518873 None:intergenic
CTGATGGCCCCACTCAGAGA+AGG 0.614227 8.3:-38517814 None:intergenic
TGATGTGCATTGGAGATGAT+AGG 0.616649 8.3:+38518886 MS.gene038603:CDS
CATTATACTAAAAGGTGCTG+GGG 0.617606 8.3:+38518009 MS.gene038603:CDS
CAGCAGAACCCAAATTTGCA+GGG 0.618312 8.3:+38517439 MS.gene038603:CDS
TAACATCTGATTCACCATCA+AGG 0.622114 8.3:-38516493 None:intergenic
ATATGTTAGTACTCATGATG+TGG 0.622726 8.3:+38517936 MS.gene038603:CDS
CAGGTCATGGGGTAGAAAGG+TGG 0.624978 8.3:-38516759 None:intergenic
ACTGGATGACTTTAATTGCG+TGG 0.625192 8.3:+38516736 MS.gene038603:CDS
CTTGGCAGGAGCCAAAATCA+GGG 0.629827 8.3:-38518594 None:intergenic
TCGTCAATGCTGTAAGGGAT+GGG 0.634025 8.3:+38517662 MS.gene038603:CDS
GAATTTAGCCCTCAGTATGG+GGG 0.635859 8.3:+38517876 MS.gene038603:CDS
GGTAGGTAGGAAGCCTAGCA+AGG 0.637239 8.3:+38518992 MS.gene038603:CDS
GGTAGCATATAATGGAAGAG+AGG 0.639482 8.3:-38516824 None:intergenic
AAGTAGGCAAAATCATCAAG+TGG 0.641749 8.3:-38516979 None:intergenic
CACCCCAAGAAGTCTTCCAA+GGG 0.641869 8.3:+38516442 MS.gene038603:CDS
GCAACTGCATCTATATCCCA+GGG 0.642398 8.3:-38517844 None:intergenic
TCAAGGAAAGTGCTTTGGTG+TGG 0.650646 8.3:+38518554 MS.gene038603:CDS
TAGCAAGAACACTTTCCAAG+TGG 0.651389 8.3:-38518633 None:intergenic
TCGGGAGCTGATGGTAACGA+CGG 0.659800 8.3:-38518954 None:intergenic
TTTGCCGGTAGGAATTCACA+TGG 0.662631 8.3:+38517261 MS.gene038603:CDS
TTGCATCGTCAATGCTGTAA+GGG 0.663687 8.3:+38517657 MS.gene038603:CDS
TAAGCACTCTTCTCGAAACG+GGG 0.682811 8.3:-38517616 None:intergenic
GCAAAGCTGGATGAAGCTGT+GGG 0.684464 8.3:+38517730 MS.gene038603:CDS
ACAACAAGCATGCTTGTACG+AGG 0.685754 8.3:-38517769 None:intergenic
TCGGGAGCGGAAAATCATTG+TGG 0.689766 8.3:+38516529 MS.gene038603:CDS
TCTCGAAACGGGGAACAGAG+CGG 0.692951 8.3:-38517606 None:intergenic
ATGATGGGAAAGGACTGTGA+AGG 0.694384 8.3:-38517042 None:intergenic
GGATCTTGATTGGAAACAGG+TGG 0.695331 8.3:+38518477 MS.gene038603:CDS
CTGGACTATGAATCTAAGCG+CGG 0.708845 8.3:+38517193 MS.gene038603:CDS
TTGCCGGTAGGAATTCACAT+GGG 0.730503 8.3:+38517262 MS.gene038603:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTCTATTTTCTTT+TGG - chr8.3:38518387-38518406 None:intergenic 10.0%
!! ATTCTATTACAATTAAAAGA+TGG + chr8.3:38516626-38516645 MS.gene038603:CDS 15.0%
!! TTCTATTACAATTAAAAGAT+GGG + chr8.3:38516627-38516646 MS.gene038603:CDS 15.0%
!!! AAATTTTGATAAATATAGTG+CGG - chr8.3:38517243-38517262 None:intergenic 15.0%
!!! GTTTTATTAATATAAGATTG+TGG - chr8.3:38518171-38518190 None:intergenic 15.0%
!!! TAATGTATTTTTTTATTTGC+AGG + chr8.3:38518413-38518432 MS.gene038603:intron 15.0%
!!! TATATTTATCAAAATTTTGC+CGG + chr8.3:38517246-38517265 MS.gene038603:CDS 15.0%
!! AAAAGGATCAATGAAATTTA+TGG + chr8.3:38517550-38517569 MS.gene038603:CDS 20.0%
!! AAAGATAAGAAAGTTATTCT+TGG + chr8.3:38517352-38517371 MS.gene038603:CDS 20.0%
!! GTTTCACTTAATATAAATAG+AGG - chr8.3:38518744-38518763 None:intergenic 20.0%
!! TGCAAACAATATATTTGTAT+GGG - chr8.3:38517699-38517718 None:intergenic 20.0%
!!! AACAATGAACACAATATTTT+TGG - chr8.3:38518241-38518260 None:intergenic 20.0%
!!! ATAAATTTCATTGATCCTTT+TGG - chr8.3:38517551-38517570 None:intergenic 20.0%
!!! TTTTTCTATTTTCTTTTGGT+GGG - chr8.3:38518383-38518402 None:intergenic 20.0%
!!! TTTTTTCTATTTTCTTTTGG+TGG - chr8.3:38518384-38518403 None:intergenic 20.0%
! AAATATATTGTTTGCAGACA+GGG + chr8.3:38517703-38517722 MS.gene038603:CDS 25.0%
! AAGCTTATTTAATTGCCAAA+AGG + chr8.3:38517533-38517552 MS.gene038603:CDS 25.0%
! AATATTGTGTTCATTGTTAG+TGG + chr8.3:38518243-38518262 MS.gene038603:CDS 25.0%
! ATACAAAAGAACTAGTAGAA+GGG + chr8.3:38518113-38518132 MS.gene038603:CDS 25.0%
! CAGGATTTATAATTTGAACA+AGG - chr8.3:38517474-38517493 None:intergenic 25.0%
! CTGCAAACAATATATTTGTA+TGG - chr8.3:38517700-38517719 None:intergenic 25.0%
! GCAAAGATCATTATACTAAA+AGG + chr8.3:38518001-38518020 MS.gene038603:CDS 25.0%
! TCAAATTATAAATCCTGCAA+GGG + chr8.3:38517477-38517496 MS.gene038603:CDS 25.0%
! TTCAAATTATAAATCCTGCA+AGG + chr8.3:38517476-38517495 MS.gene038603:CDS 25.0%
! TTGTTGAATTCGGATTTAAT+TGG + chr8.3:38517112-38517131 MS.gene038603:CDS 25.0%
! TTTAGTATAATGATCTTTGC+AGG - chr8.3:38518001-38518020 None:intergenic 25.0%
!! TCATGAATTTTCTCTTTACA+GGG + chr8.3:38518792-38518811 MS.gene038603:intron 25.0%
!! TTTTCTATTTTCTTTTGGTG+GGG - chr8.3:38518382-38518401 None:intergenic 25.0%
!! TTTTGTATGCTGATACAATA+TGG - chr8.3:38518101-38518120 None:intergenic 25.0%
!!! TGTATTTTTTTATTTGCAGG+TGG + chr8.3:38518416-38518435 MS.gene038603:intron 25.0%
AACCCAAACAAAATCATCAT+CGG - chr8.3:38516951-38516970 None:intergenic 30.0%
AATATTTGCAGACAAAGTCA+TGG + chr8.3:38516913-38516932 MS.gene038603:CDS 30.0%
AATTTGAAAAACTCTACCTG+TGG - chr8.3:38518706-38518725 None:intergenic 30.0%
ATATGTTAGTACTCATGATG+TGG + chr8.3:38517936-38517955 MS.gene038603:CDS 30.0%
CAAATATATTGTTTGCAGAC+AGG + chr8.3:38517702-38517721 MS.gene038603:CDS 30.0%
CAAATTATAAATCCTGCAAG+GGG + chr8.3:38517478-38517497 MS.gene038603:CDS 30.0%
CAATATATTTGTATGGGACT+AGG - chr8.3:38517693-38517712 None:intergenic 30.0%
CATACAAAAGAACTAGTAGA+AGG + chr8.3:38518112-38518131 MS.gene038603:CDS 30.0%
CATATAGGACTTGATTACTT+TGG + chr8.3:38517217-38517236 MS.gene038603:CDS 30.0%
GAGATATTGATACTGCTAAA+TGG + chr8.3:38516579-38516598 MS.gene038603:CDS 30.0%
GATTTCATCGAGTTAAACTT+GGG + chr8.3:38517014-38517033 MS.gene038603:CDS 30.0%
TAAGAAAGTTATTCTTGGTG+TGG + chr8.3:38517357-38517376 MS.gene038603:CDS 30.0%
TCTCAAAGGATTGTTGAATT+CGG + chr8.3:38517102-38517121 MS.gene038603:CDS 30.0%
TGGATCTAATATTGAAGTCA+AGG + chr8.3:38518537-38518556 MS.gene038603:CDS 30.0%
! AGAAAATATTTTGCCTTGCT+AGG - chr8.3:38519008-38519027 None:intergenic 30.0%
! AGAGTTATTTCACTTTCTCA+TGG + chr8.3:38518054-38518073 MS.gene038603:CDS 30.0%
! ATCATTATACTAAAAGGTGC+TGG + chr8.3:38518007-38518026 MS.gene038603:CDS 30.0%
! GTCATGAATTTTCTCTTTAC+AGG + chr8.3:38518791-38518810 MS.gene038603:intron 30.0%
! TTTATCAAAATTTTGCCGGT+AGG + chr8.3:38517250-38517269 MS.gene038603:CDS 30.0%
! TTTCACTTTCTCATGGTTTT+AGG + chr8.3:38518061-38518080 MS.gene038603:CDS 30.0%
!! GACGACATGGATATTTTTAA+GGG + chr8.3:38517379-38517398 MS.gene038603:CDS 30.0%
!! TAAATTTCAGATGATGGGAA+AGG - chr8.3:38517055-38517074 None:intergenic 30.0%
!! TCATTATACTAAAAGGTGCT+GGG + chr8.3:38518008-38518027 MS.gene038603:CDS 30.0%
!!! CTGAACATGGTTACTTTTTA+AGG + chr8.3:38518325-38518344 MS.gene038603:CDS 30.0%
AAGTAGGCAAAATCATCAAG+TGG - chr8.3:38516982-38517001 None:intergenic 35.0%
AATAAGCACTCTTCTCGAAA+CGG - chr8.3:38517621-38517640 None:intergenic 35.0%
AATCGTTTCCTCAAGAAAGT+AGG - chr8.3:38516998-38517017 None:intergenic 35.0%
ACCCAAACAAAATCATCATC+GGG - chr8.3:38516950-38516969 None:intergenic 35.0%
AGCATATGGGTAGCATATAA+TGG - chr8.3:38516835-38516854 None:intergenic 35.0%
ATGAATTTAGCCCTCAGTAT+GGG + chr8.3:38517874-38517893 MS.gene038603:CDS 35.0%
ATTTGTTTGCGGATCTTGAT+TGG + chr8.3:38518467-38518486 MS.gene038603:CDS 35.0%
CAAGAGATTCTCTGAATGAA+TGG + chr8.3:38518271-38518290 MS.gene038603:CDS 35.0%
CATATCGATAGTGTTTCTCA+TGG - chr8.3:38517921-38517940 None:intergenic 35.0%
CGATTTCATCGAGTTAAACT+TGG + chr8.3:38517013-38517032 MS.gene038603:CDS 35.0%
CTCAAAAGAAACCTGGAATT+GGG - chr8.3:38519105-38519124 None:intergenic 35.0%
CTCTAAGCTAAAAGAGATTC+AGG + chr8.3:38517321-38517340 MS.gene038603:CDS 35.0%
CTCTTGAATATGGTTAATGC+CGG + chr8.3:38518846-38518865 MS.gene038603:CDS 35.0%
CTGCAGAAAAAGTTCTATCT+TGG + chr8.3:38516779-38516798 MS.gene038603:CDS 35.0%
GAACCAGCAATTGTTAAAAG+AGG + chr8.3:38518658-38518677 MS.gene038603:CDS 35.0%
GATACTGAGGTAATCTATGT+GGG + chr8.3:38516659-38516678 MS.gene038603:CDS 35.0%
GATGTTGTAAAGTTGCTTGA+TGG + chr8.3:38519041-38519060 MS.gene038603:CDS 35.0%
GCCATCATAATCAAGAAAGA+TGG - chr8.3:38518139-38518158 None:intergenic 35.0%
GCCATCTTTCTTGATTATGA+TGG + chr8.3:38518135-38518154 MS.gene038603:CDS 35.0%
GCTTAACTTCAACAATATGC+TGG - chr8.3:38518684-38518703 None:intergenic 35.0%
GGAAACAAGTCATTTGTTTG+CGG + chr8.3:38518456-38518475 MS.gene038603:CDS 35.0%
GTAAGGGATGAAATTCTCAA+AGG + chr8.3:38517088-38517107 MS.gene038603:CDS 35.0%
TAACATCTGATTCACCATCA+AGG - chr8.3:38516496-38516515 None:intergenic 35.0%
TAAGCACAGATATGACTTCA+GGG - chr8.3:38518200-38518219 None:intergenic 35.0%
TACTCATGATGTGGCATATT+GGG + chr8.3:38517945-38517964 MS.gene038603:CDS 35.0%
TATGAATTTAGCCCTCAGTA+TGG + chr8.3:38517873-38517892 MS.gene038603:CDS 35.0%
TATTGTTGAAGTTAAGCCAC+AGG + chr8.3:38518687-38518706 MS.gene038603:CDS 35.0%
TCCGGTAAATTTCAGATGAT+GGG - chr8.3:38517060-38517079 None:intergenic 35.0%
TCTCAAAAGAAACCTGGAAT+TGG - chr8.3:38519106-38519125 None:intergenic 35.0%
TGAAATTGCTCAGAGATTAC+TGG + chr8.3:38516718-38516737 MS.gene038603:CDS 35.0%
TGAGAAGGTTCTCTTGAATA+TGG + chr8.3:38518836-38518855 MS.gene038603:CDS 35.0%
TGATACTGAGGTAATCTATG+TGG + chr8.3:38516658-38516677 MS.gene038603:CDS 35.0%
TGCTAAATGGTGTTTCAGTT+GGG + chr8.3:38516592-38516611 MS.gene038603:CDS 35.0%
TGCTGATACAATATGGTCAA+TGG - chr8.3:38518094-38518113 None:intergenic 35.0%
TGTGTTCATTGTTAGTGGAA+GGG + chr8.3:38518248-38518267 MS.gene038603:CDS 35.0%
TTAAGCACAGATATGACTTC+AGG - chr8.3:38518201-38518220 None:intergenic 35.0%
TTGAGAATTTCATCCCTTAC+TGG - chr8.3:38517088-38517107 None:intergenic 35.0%
TTGTGTTCATTGTTAGTGGA+AGG + chr8.3:38518247-38518266 MS.gene038603:CDS 35.0%
TTTACATCATGCAAACTGCT+GGG + chr8.3:38518294-38518313 MS.gene038603:CDS 35.0%
! AATCTTTTAGACTTAGCTGG+TGG + chr8.3:38516398-38516417 MS.gene038603:CDS 35.0%
! ATCCCGATGATGATTTTGTT+TGG + chr8.3:38516945-38516964 MS.gene038603:CDS 35.0%
! ATGTTAGTTCTTCTGGATGT+CGG + chr8.3:38516510-38516529 MS.gene038603:CDS 35.0%
! GAATCAGATGTTAGTTCTTC+TGG + chr8.3:38516503-38516522 MS.gene038603:CDS 35.0%
! GCTAATCTTTTAGACTTAGC+TGG + chr8.3:38516395-38516414 MS.gene038603:CDS 35.0%
! TCCCATCATCTGAAATTTAC+CGG + chr8.3:38517056-38517075 MS.gene038603:CDS 35.0%
! TGATTTTGCCTACTTTCTTG+AGG + chr8.3:38516987-38517006 MS.gene038603:CDS 35.0%
! TTTAGCTTAGAGGATGTAGA+AGG - chr8.3:38517313-38517332 None:intergenic 35.0%
!! CAAGATAGAACTTTTTCTGC+AGG - chr8.3:38516781-38516800 None:intergenic 35.0%
!! CAATCTGAAATTTCTAGCTG+TGG + chr8.3:38517405-38517424 MS.gene038603:CDS 35.0%
!! CATTATACTAAAAGGTGCTG+GGG + chr8.3:38518009-38518028 MS.gene038603:CDS 35.0%
!! GGACGACATGGATATTTTTA+AGG + chr8.3:38517378-38517397 MS.gene038603:CDS 35.0%
!! TCCCGATGATGATTTTGTTT+GGG + chr8.3:38516946-38516965 MS.gene038603:CDS 35.0%
!!! CTGAATCTCTTTTAGCTTAG+AGG - chr8.3:38517323-38517342 None:intergenic 35.0%
!!! TTTGGGCTTTTGATTTGTTG+AGG - chr8.3:38519075-38519094 None:intergenic 35.0%
ACAACTTCACCCTGCAAATT+TGG - chr8.3:38517451-38517470 None:intergenic 40.0%
ACTGGATGACTTTAATTGCG+TGG + chr8.3:38516736-38516755 MS.gene038603:CDS 40.0%
AGCATCTATCTCAACCTTGA+GGG - chr8.3:38516687-38516706 None:intergenic 40.0%
ATAACCCTTGGAAGACTTCT+TGG - chr8.3:38516449-38516468 None:intergenic 40.0%
ATAAGCACTCTTCTCGAAAC+GGG - chr8.3:38517620-38517639 None:intergenic 40.0%
ATCACCATGATCTGAGCATA+TGG - chr8.3:38516849-38516868 None:intergenic 40.0%
CAACTTCACCCTGCAAATTT+GGG - chr8.3:38517450-38517469 None:intergenic 40.0%
CTGCTAAATGGTGTTTCAGT+TGG + chr8.3:38516591-38516610 MS.gene038603:CDS 40.0%
GTACTCATGATGTGGCATAT+TGG + chr8.3:38517944-38517963 MS.gene038603:CDS 40.0%
GTCCGGTAAATTTCAGATGA+TGG - chr8.3:38517061-38517080 None:intergenic 40.0%
GTTTACATCATGCAAACTGC+TGG + chr8.3:38518293-38518312 MS.gene038603:CDS 40.0%
TAACCCTTGGAAGACTTCTT+GGG - chr8.3:38516448-38516467 None:intergenic 40.0%
TACCGTGCAAGCAAAAATCT+CGG - chr8.3:38518976-38518995 None:intergenic 40.0%
TAGCAAGAACACTTTCCAAG+TGG - chr8.3:38518636-38518655 None:intergenic 40.0%
TAGCATCTATCTCAACCTTG+AGG - chr8.3:38516688-38516707 None:intergenic 40.0%
TCAAGGTCAGAAATAATCCC+AGG - chr8.3:38516479-38516498 None:intergenic 40.0%
TCACCATGATCTGAGCATAT+GGG - chr8.3:38516848-38516867 None:intergenic 40.0%
TCGTATACAGAAGCAACTGA+TGG + chr8.3:38518517-38518536 MS.gene038603:CDS 40.0%
TCTTTACAGGGAGTAACCAA+AGG + chr8.3:38518804-38518823 MS.gene038603:intron 40.0%
TGAATTTAGCCCTCAGTATG+GGG + chr8.3:38517875-38517894 MS.gene038603:CDS 40.0%
TGATGTGCATTGGAGATGAT+AGG + chr8.3:38518886-38518905 MS.gene038603:CDS 40.0%
TGGAATTGGGCAAGATGTTT+GGG - chr8.3:38519092-38519111 None:intergenic 40.0%
TTGCATCGTCAATGCTGTAA+GGG + chr8.3:38517657-38517676 MS.gene038603:CDS 40.0%
! ATATCTCTTTTAGCCTGCAG+CGG - chr8.3:38516566-38516585 None:intergenic 40.0%
! CTTGTTGTGTCTGAGTTCAT+TGG + chr8.3:38517784-38517803 MS.gene038603:CDS 40.0%
! GGTAGCATATAATGGAAGAG+AGG - chr8.3:38516827-38516846 None:intergenic 40.0%
! TGGCCTCTTTTAACAATTGC+TGG - chr8.3:38518664-38518683 None:intergenic 40.0%
! TGGGTTTTCTTCTGATACTG+AGG + chr8.3:38516646-38516665 MS.gene038603:CDS 40.0%
! TGTTAGTTCTTCTGGATGTC+GGG + chr8.3:38516511-38516530 MS.gene038603:CDS 40.0%
!! AACTTTTTCTGCAGGTCATG+GGG - chr8.3:38516773-38516792 None:intergenic 40.0%
!! ACGCAGTTTTATGCAGGATT+TGG + chr8.3:38517969-38517988 MS.gene038603:CDS 40.0%
!! AGAACTTTTTCTGCAGGTCA+TGG - chr8.3:38516775-38516794 None:intergenic 40.0%
!! GAACTTTTTCTGCAGGTCAT+GGG - chr8.3:38516774-38516793 None:intergenic 40.0%
!! GGGATTATTTCTGACCTTGA+TGG + chr8.3:38516479-38516498 MS.gene038603:CDS 40.0%
!! TGAAGTCAAGGAAAGTGCTT+TGG + chr8.3:38518549-38518568 MS.gene038603:CDS 40.0%
!! TTTGATTTGTTGAGGTAGCG+AGG - chr8.3:38519067-38519086 None:intergenic 40.0%
AACCCTTGGAAGACTTCTTG+GGG - chr8.3:38516447-38516466 None:intergenic 45.0%
AATCTATGTGGGTTCCCTCA+AGG + chr8.3:38516670-38516689 MS.gene038603:CDS 45.0%
ACAACAAGCATGCTTGTACG+AGG - chr8.3:38517772-38517791 None:intergenic 45.0%
ACAGATATGACTTCAGGGCT+GGG - chr8.3:38518195-38518214 None:intergenic 45.0%
ACAGGGAGTAACCAAAGGTT+TGG + chr8.3:38518809-38518828 MS.gene038603:intron 45.0%
ACCGTGCAAGCAAAAATCTC+GGG - chr8.3:38518975-38518994 None:intergenic 45.0%
AGCAACTGCATCTATATCCC+AGG - chr8.3:38517848-38517867 None:intergenic 45.0%
ATAAATCCTGCAAGGGGTTC+AGG + chr8.3:38517484-38517503 MS.gene038603:CDS 45.0%
ATCGTCAATGCTGTAAGGGA+TGG + chr8.3:38517661-38517680 MS.gene038603:CDS 45.0%
ATGCACATCACGAAATCTGG+TGG - chr8.3:38518876-38518895 None:intergenic 45.0%
ATGGTGTTTCAGTTGGGATG+AGG + chr8.3:38516598-38516617 MS.gene038603:CDS 45.0%
CAAACATCTTGCCCAATTCC+AGG + chr8.3:38519091-38519110 MS.gene038603:CDS 45.0%
CAAAGAATTGCTGGACCACT+TGG + chr8.3:38518618-38518637 MS.gene038603:CDS 45.0%
CAAGGGTTATGACTGTTCCT+GGG + chr8.3:38516459-38516478 MS.gene038603:CDS 45.0%
CAAGTGGTCCAGCAATTCTT+TGG - chr8.3:38518620-38518639 None:intergenic 45.0%
CAGCAGAACCCAAATTTGCA+GGG + chr8.3:38517439-38517458 MS.gene038603:CDS 45.0%
CCAATGCACATCACGAAATC+TGG - chr8.3:38518879-38518898 None:intergenic 45.0%
CCAGATTTCGTGATGTGCAT+TGG + chr8.3:38518876-38518895 MS.gene038603:CDS 45.0%
CTACCCATATGCTCAGATCA+TGG + chr8.3:38516842-38516861 MS.gene038603:CDS 45.0%
CTACCCATGTGAATTCCTAC+CGG - chr8.3:38517268-38517287 None:intergenic 45.0%
CTGGAATTGGGCAAGATGTT+TGG - chr8.3:38519093-38519112 None:intergenic 45.0%
CTGGACTATGAATCTAAGCG+CGG + chr8.3:38517193-38517212 MS.gene038603:CDS 45.0%
CTGTGCTCTCAAAAGAAACC+TGG - chr8.3:38519112-38519131 None:intergenic 45.0%
CTTCTCAGCTACCAAACCTT+TGG - chr8.3:38518823-38518842 None:intergenic 45.0%
GAATCTAAGCGCGGACATAT+AGG + chr8.3:38517202-38517221 MS.gene038603:CDS 45.0%
GAATTTAGCCCTCAGTATGG+GGG + chr8.3:38517876-38517895 MS.gene038603:CDS 45.0%
GACTGAGGAGGAAGAAACAA+AGG - chr8.3:38518358-38518377 None:intergenic 45.0%
GCAACTGCATCTATATCCCA+GGG - chr8.3:38517847-38517866 None:intergenic 45.0%
GGATCTTGATTGGAAACAGG+TGG + chr8.3:38518477-38518496 MS.gene038603:CDS 45.0%
GTGGAATAGCGACTCTGAAT+GGG + chr8.3:38518435-38518454 MS.gene038603:CDS 45.0%
GTTGCATCGTCAATGCTGTA+AGG + chr8.3:38517656-38517675 MS.gene038603:CDS 45.0%
GTTGTTCACCTTCTCTGAGT+GGG + chr8.3:38517806-38517825 MS.gene038603:CDS 45.0%
TAAATCCTGCAAGGGGTTCA+GGG + chr8.3:38517485-38517504 MS.gene038603:CDS 45.0%
TAAGCACTCTTCTCGAAACG+GGG - chr8.3:38517619-38517638 None:intergenic 45.0%
TCGTCAATGCTGTAAGGGAT+GGG + chr8.3:38517662-38517681 MS.gene038603:CDS 45.0%
TCTGTATACGACTGCATGAC+AGG - chr8.3:38518508-38518527 None:intergenic 45.0%
TCTTGCTGCAGTAGAATGCT+AGG + chr8.3:38517169-38517188 MS.gene038603:CDS 45.0%
TGAGATAGATGCTAGTGAGC+AGG + chr8.3:38516694-38516713 MS.gene038603:CDS 45.0%
TGCGGATCTTGATTGGAAAC+AGG + chr8.3:38518474-38518493 MS.gene038603:CDS 45.0%
TTACCGGACTTTGCCAGTAA+GGG + chr8.3:38517072-38517091 MS.gene038603:CDS 45.0%
TTGCCGGTAGGAATTCACAT+GGG + chr8.3:38517262-38517281 MS.gene038603:CDS 45.0%
TTGTTCACCTTCTCTGAGTG+GGG + chr8.3:38517807-38517826 MS.gene038603:CDS 45.0%
TTTACCGGACTTTGCCAGTA+AGG + chr8.3:38517071-38517090 MS.gene038603:CDS 45.0%
TTTGCCGGTAGGAATTCACA+TGG + chr8.3:38517261-38517280 MS.gene038603:CDS 45.0%
! ATGATGGGAAAGGACTGTGA+AGG - chr8.3:38517045-38517064 None:intergenic 45.0%
! CAAAGGTTTGGTAGCTGAGA+AGG + chr8.3:38518821-38518840 MS.gene038603:CDS 45.0%
! CAAGATGCAGACCCTGATTT+TGG + chr8.3:38518583-38518602 MS.gene038603:CDS 45.0%
! GAGATTTTTGCTTGCACGGT+AGG + chr8.3:38518975-38518994 MS.gene038603:CDS 45.0%
! GAGCGGTCAATGATAATGAC+TGG - chr8.3:38517592-38517611 None:intergenic 45.0%
! GTTTTTGTAAGCAGCAGCTC+TGG + chr8.3:38516801-38516820 MS.gene038603:CDS 45.0%
! TATTCTTGGTGTGGACGACA+TGG + chr8.3:38517366-38517385 MS.gene038603:CDS 45.0%
! TCCCGAGATTTTTGCTTGCA+CGG + chr8.3:38518971-38518990 MS.gene038603:CDS 45.0%
! TTTTTGCTTGCACGGTAGGT+AGG + chr8.3:38518979-38518998 MS.gene038603:CDS 45.0%
!! ACTAAAAGGTGCTGGGGAAT+TGG + chr8.3:38518015-38518034 MS.gene038603:CDS 45.0%
!! CACGAAATCTGGTGGATTAC+CGG - chr8.3:38518868-38518887 None:intergenic 45.0%
!! TCAAGGAAAGTGCTTTGGTG+TGG + chr8.3:38518554-38518573 MS.gene038603:CDS 45.0%
ACACCCCAAGAAGTCTTCCA+AGG + chr8.3:38516441-38516460 MS.gene038603:CDS 50.0%
AGATATGACTTCAGGGCTGG+GGG - chr8.3:38518193-38518212 None:intergenic 50.0%
ATCGCTTTGACCGAGTGCTT+TGG + chr8.3:38516867-38516886 MS.gene038603:CDS 50.0%
CACAGATATGACTTCAGGGC+TGG - chr8.3:38518196-38518215 None:intergenic 50.0%
CACCCCAAGAAGTCTTCCAA+GGG + chr8.3:38516442-38516461 MS.gene038603:CDS 50.0%
CAGATATGACTTCAGGGCTG+GGG - chr8.3:38518194-38518213 None:intergenic 50.0%
CATCCCTTACTGGCAAAGTC+CGG - chr8.3:38517078-38517097 None:intergenic 50.0%
CCAAGGGTTATGACTGTTCC+TGG + chr8.3:38516458-38516477 MS.gene038603:CDS 50.0%
CCAGGAACAGTCATAACCCT+TGG - chr8.3:38516461-38516480 None:intergenic 50.0%
CGGTAGGAATTCACATGGGT+AGG + chr8.3:38517266-38517285 MS.gene038603:CDS 50.0%
CTCAGAAACCCCCATACTGA+GGG - chr8.3:38517887-38517906 None:intergenic 50.0%
CTGCAGTAGAATGCTAGGTC+TGG + chr8.3:38517174-38517193 MS.gene038603:CDS 50.0%
CTGCCAAGCCAAAGAATTGC+TGG + chr8.3:38518609-38518628 MS.gene038603:CDS 50.0%
CTTGGCAGGAGCCAAAATCA+GGG - chr8.3:38518597-38518616 None:intergenic 50.0%
GCAAAAATCTCGGGAGCTGA+TGG - chr8.3:38518966-38518985 None:intergenic 50.0%
GCAAAGCTGGATGAAGCTGT+GGG + chr8.3:38517730-38517749 MS.gene038603:CDS 50.0%
GCAGCAGAACCCAAATTTGC+AGG + chr8.3:38517438-38517457 MS.gene038603:CDS 50.0%
GGTCCAGCAATTCTTTGGCT+TGG - chr8.3:38518615-38518634 None:intergenic 50.0%
GGTGGAATAGCGACTCTGAA+TGG + chr8.3:38518434-38518453 MS.gene038603:intron 50.0%
GGTTGTTCACCTTCTCTGAG+TGG + chr8.3:38517805-38517824 MS.gene038603:CDS 50.0%
TCGGGAGCGGAAAATCATTG+TGG + chr8.3:38516529-38516548 MS.gene038603:CDS 50.0%
TCTCAGAAACCCCCATACTG+AGG - chr8.3:38517888-38517907 None:intergenic 50.0%
TGCAAAGCTGGATGAAGCTG+TGG + chr8.3:38517729-38517748 MS.gene038603:CDS 50.0%
! CATAAGCCTGCCAAAGCACT+CGG - chr8.3:38516880-38516899 None:intergenic 50.0%
! TTCTTTTGGTGGGGTGACTG+AGG - chr8.3:38518373-38518392 None:intergenic 50.0%
!! CAGCAATTCTTTGGCTTGGC+AGG - chr8.3:38518611-38518630 None:intergenic 50.0%
!! TTGGGCACGCAGTTTTATGC+AGG + chr8.3:38517963-38517982 MS.gene038603:CDS 50.0%
ATCCCAGGGATTGACCCTGA+TGG - chr8.3:38517833-38517852 None:intergenic 55.0%
CAGACAGGGAACTGCAAAGC+TGG + chr8.3:38517717-38517736 MS.gene038603:CDS 55.0%
CAGGTCATGGGGTAGAAAGG+TGG - chr8.3:38516762-38516781 None:intergenic 55.0%
CTGCAGGTCATGGGGTAGAA+AGG - chr8.3:38516765-38516784 None:intergenic 55.0%
CTGGGACTTGCAGCTGAACA+TGG + chr8.3:38518312-38518331 MS.gene038603:CDS 55.0%
CTTTGACCGAGTGCTTTGGC+AGG + chr8.3:38516871-38516890 MS.gene038603:CDS 55.0%
GCTTGGCAGGAGCCAAAATC+AGG - chr8.3:38518598-38518617 None:intergenic 55.0%
GGAAGACTTCTTGGGGTGTG+AGG - chr8.3:38516440-38516459 None:intergenic 55.0%
GGGTTCAGGGAAGGATGTTC+AGG + chr8.3:38517498-38517517 MS.gene038603:CDS 55.0%
GGTAGGTAGGAAGCCTAGCA+AGG + chr8.3:38518992-38519011 MS.gene038603:CDS 55.0%
GTTCTTCTGGATGTCGGGAG+CGG + chr8.3:38516516-38516535 MS.gene038603:CDS 55.0%
TCTCGAAACGGGGAACAGAG+CGG - chr8.3:38517609-38517628 None:intergenic 55.0%
TTCTCTGAGTGGGGCCATCA+GGG + chr8.3:38517816-38517835 MS.gene038603:CDS 55.0%
! TCGGGAGCTGATGGTAACGA+CGG - chr8.3:38518957-38518976 None:intergenic 55.0%
! TGGGGAATTGGTCTGGGCTT+GGG + chr8.3:38518027-38518046 MS.gene038603:CDS 55.0%
! TTTTGGTGGGGTGACTGAGG+AGG - chr8.3:38518370-38518389 None:intergenic 55.0%
!! AAGGTGCTGGGGAATTGGTC+TGG + chr8.3:38518020-38518039 MS.gene038603:CDS 55.0%
!! AGGTGCTGGGGAATTGGTCT+GGG + chr8.3:38518021-38518040 MS.gene038603:CDS 55.0%
CTGATGGCCCCACTCAGAGA+AGG - chr8.3:38517817-38517836 None:intergenic 60.0%
CTTCTCTGAGTGGGGCCATC+AGG + chr8.3:38517815-38517834 MS.gene038603:CDS 60.0%
GGCAAACATGTTGCCGCTGC+AGG + chr8.3:38516550-38516569 MS.gene038603:CDS 60.0%
GGCCATCAGGGTCAATCCCT+GGG + chr8.3:38517828-38517847 MS.gene038603:CDS 60.0%
TCCTGCAAGGGGTTCAGGGA+AGG + chr8.3:38517489-38517508 MS.gene038603:CDS 60.0%
TCCTTCCCTGAACCCCTTGC+AGG - chr8.3:38517493-38517512 None:intergenic 60.0%
! CGGGAGCTGATGGTAACGAC+GGG - chr8.3:38518956-38518975 None:intergenic 60.0%
! CTGGGGAATTGGTCTGGGCT+TGG + chr8.3:38518026-38518045 MS.gene038603:CDS 60.0%
! GGGGAATTGGTCTGGGCTTG+GGG + chr8.3:38518028-38518047 MS.gene038603:CDS 60.0%
GGGCCATCAGGGTCAATCCC+TGG + chr8.3:38517827-38517846 MS.gene038603:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 38516377 38519139 38516377 ID=MS.gene038603
chr8.3 mRNA 38516377 38519139 38516377 ID=MS.gene038603.t1;Parent=MS.gene038603
chr8.3 exon 38516377 38518346 38516377 ID=MS.gene038603.t1.exon1;Parent=MS.gene038603.t1
chr8.3 CDS 38516377 38518346 38516377 ID=cds.MS.gene038603.t1;Parent=MS.gene038603.t1
chr8.3 exon 38518435 38518708 38518435 ID=MS.gene038603.t1.exon2;Parent=MS.gene038603.t1
chr8.3 CDS 38518435 38518708 38518435 ID=cds.MS.gene038603.t1;Parent=MS.gene038603.t1
chr8.3 exon 38518813 38519139 38518813 ID=MS.gene038603.t1.exon3;Parent=MS.gene038603.t1
chr8.3 CDS 38518813 38519139 38518813 ID=cds.MS.gene038603.t1;Parent=MS.gene038603.t1
Gene Sequence

>MS.gene038603

ATGACATCAAGATCGTATGCTAATCTTTTAGACTTAGCTGGTGGAGACTTGCTTGATATTCCTCACACCCCAAGAAGTCTTCCAAGGGTTATGACTGTTCCTGGGATTATTTCTGACCTTGATGGTGAATCAGATGTTAGTTCTTCTGGATGTCGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCGCTGCAGGCTAAAAGAGATATTGATACTGCTAAATGGTGTTTCAGTTGGGATGAGGATTCAATTCTATTACAATTAAAAGATGGGTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCCCTCAAGGTTGAGATAGATGCTAGTGAGCAGGATGAAATTGCTCAGAGATTACTGGATGACTTTAATTGCGTGGCCACCTTTCTACCCCATGACCTGCAGAAAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCTCTCTTCCATTATATGCTACCCATATGCTCAGATCATGGTGATCGCTTTGACCGAGTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTGATCCCGATGATGATTTTGTTTGGGTTCATGACTACCACTTGATGATTTTGCCTACTTTCTTGAGGAAACGATTTCATCGAGTTAAACTTGGGTTTTTCCTTCACAGTCCTTTCCCATCATCTGAAATTTACCGGACTTTGCCAGTAAGGGATGAAATTCTCAAAGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTCGATTACGCACGTCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGCGGACATATAGGACTTGATTACTTTGGCCGCACTATATTTATCAAAATTTTGCCGGTAGGAATTCACATGGGTAGGCTTGACTCTGTATTAAATCTTCCTTCTACATCCTCTAAGCTAAAAGAGATTCAGGAAGAGTTTAAAGATAAGAAAGTTATTCTTGGTGTGGACGACATGGATATTTTTAAGGGTATCAATCTGAAATTTCTAGCTGTGGAACAGCTGCTGCAGCAGAACCCAAATTTGCAGGGTGAAGTTGTCCTTGTTCAAATTATAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAAGAAGCTTATTTAATTGCCAAAAGGATCAATGAAATTTATGGTTCAAAACATTATCAGCCAGTCATTATCATTGACCGCTCTGTTCCCCGTTTCGAGAAGAGTGCTTATTATGCTCTAGCTGAATGTTGCATCGTCAATGCTGTAAGGGATGGGATGAACCTAGTCCCATACAAATATATTGTTTGCAGACAGGGAACTGCAAAGCTGGATGAAGCTGTGGGTAGACAAAGTGATTCTCCTCGTACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTGAGTGGGGCCATCAGGGTCAATCCCTGGGATATAGATGCAGTTGCTGATGCTATGAATTTAGCCCTCAGTATGGGGGTTTCTGAGAAGAAGTTGCGCCATGAGAAACACTATCGATATGTTAGTACTCATGATGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCCTGCAAAGATCATTATACTAAAAGGTGCTGGGGAATTGGTCTGGGCTTGGGGTTCAGAGTTATTTCACTTTCTCATGGTTTTAGGAAGCTGTCCATTGACCATATTGTATCAGCATACAAAAGAACTAGTAGAAGGGCCATCTTTCTTGATTATGATGGCACTCTTGTACCACAATCTTATATTAATAAAACCCCCAGCCCTGAAGTCATATCTGTGCTTAATTCTCTTTGTAATGATACCAAAAATATTGTGTTCATTGTTAGTGGAAGGGCAAGAGATTCTCTGAATGAATGGTTTACATCATGCAAACTGCTGGGACTTGCAGCTGAACATGGTTACTTTTTAAGGTATGTCTCCTTTGTTTCTTCCTCCTCAGTCACCCCACCAAAAGAAAATAGAAAAAAATATAATACTAATGTATTTTTTTATTTGCAGGTGGAATAGCGACTCTGAATGGGAAACAAGTCATTTGTTTGCGGATCTTGATTGGAAACAGGTGGTGCTGCCTGTCATGCAGTCGTATACAGAAGCAACTGATGGATCTAATATTGAAGTCAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGCTCCTGCCAAGCCAAAGAATTGCTGGACCACTTGGAAAGTGTTCTTGCTAATGAACCAGCAATTGTTAAAAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGTAGAGTTTTTCAAATTCGTTCACTGCATCTTCCTCTATTTATATTAAGTGAAACTAGTAAGCTTGAATTGTTTTAATTGATGTCATGAATTTTCTCTTTACAGGGAGTAACCAAAGGTTTGGTAGCTGAGAAGGTTCTCTTGAATATGGTTAATGCCGGTAATCCACCAGATTTCGTGATGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGTACAGTCTCGTGCCCGTCGTTACCATCAGCTCCCGAGATTTTTGCTTGCACGGTAGGTAGGAAGCCTAGCAAGGCAAAATATTTTCTTGATGACACTGCTGATGTTGTAAAGTTGCTTGATGGCCTCGCTACCTCAACAAATCAAAAGCCCAAACATCTTGCCCAATTCCAGGTTTCTTTTGAGAGCACAGTTTCTTAG

Protein sequence

>MS.gene038603.t1

MTSRSYANLLDLAGGDLLDIPHTPRSLPRVMTVPGIISDLDGESDVSSSGCRERKIIVANMLPLQAKRDIDTAKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKVEIDASEQDEIAQRLLDDFNCVATFLPHDLQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRVLWQAYVSANKIFADKVMEVIDPDDDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSSKLKEIQEEFKDKKVILGVDDMDIFKGINLKFLAVEQLLQQNPNLQGEVVLVQIINPARGSGKDVQEAKKEAYLIAKRINEIYGSKHYQPVIIIDRSVPRFEKSAYYALAECCIVNAVRDGMNLVPYKYIVCRQGTAKLDEAVGRQSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMNLALSMGVSEKKLRHEKHYRYVSTHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVISLSHGFRKLSIDHIVSAYKRTSRRAIFLDYDGTLVPQSYINKTPSPEVISVLNSLCNDTKNIVFIVSGRARDSLNEWFTSCKLLGLAAEHGYFLRWNSDSEWETSHLFADLDWKQVVLPVMQSYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAIVKRGQHIVEVKPQGVTKGLVAEKVLLNMVNAGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPSAPEIFACTVGRKPSKAKYFLDDTADVVKLLDGLATSTNQKPKHLAQFQVSFESTVS