Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038603.t1 | XP_024629627.1 | 99.4 | 856 | 5 | 0 | 1 | 856 | 1 | 856 | 0.00E+00 | 1744.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038603.t1 | Q9LRA7 | 74.9 | 867 | 206 | 4 | 1 | 855 | 1 | 867 | 0.0e+00 | 1365.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038603.t1 | A0A072U2F7 | 99.4 | 856 | 5 | 0 | 1 | 856 | 1 | 856 | 0.0e+00 | 1744.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene038603 | MS.gene026499 | PPI |
MS.gene95835 | MS.gene038603 | PPI |
MS.gene038603 | MS.gene029463 | PPI |
MS.gene038603 | MS.gene95324 | PPI |
MS.gene62674 | MS.gene038603 | PPI |
MS.gene038603 | MS.gene009143 | PPI |
MS.gene038603 | MS.gene035660 | PPI |
MS.gene038603 | MS.gene73417 | PPI |
MS.gene012447 | MS.gene038603 | PPI |
MS.gene038603 | MS.gene75183 | PPI |
MS.gene038603 | MS.gene040931 | PPI |
MS.gene038603 | MS.gene71778 | PPI |
MS.gene038603 | MS.gene031592 | PPI |
MS.gene038603 | MS.gene57938 | PPI |
MS.gene83030 | MS.gene038603 | PPI |
MS.gene038603 | MS.gene62674 | PPI |
MS.gene038603 | MS.gene018379 | PPI |
MS.gene038603 | MS.gene006702 | PPI |
MS.gene038603 | MS.gene015639 | PPI |
MS.gene038603 | MS.gene71003 | PPI |
MS.gene045478 | MS.gene038603 | PPI |
MS.gene038603 | MS.gene83030 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038603.t1 | MTR_8g063790 | 99.416 | 856 | 5 | 0 | 1 | 856 | 1 | 856 | 0.0 | 1766 |
MS.gene038603.t1 | MTR_1g109620 | 66.627 | 845 | 274 | 2 | 1 | 839 | 1 | 843 | 0.0 | 1191 |
MS.gene038603.t1 | MTR_4g080160 | 63.466 | 854 | 297 | 3 | 1 | 841 | 1 | 852 | 0.0 | 1150 |
MS.gene038603.t1 | MTR_8g105740 | 65.258 | 852 | 280 | 7 | 1 | 839 | 1 | 849 | 0.0 | 1149 |
MS.gene038603.t1 | MTR_1g032730 | 63.934 | 854 | 292 | 6 | 1 | 840 | 1 | 852 | 0.0 | 1131 |
MS.gene038603.t1 | MTR_4g129270 | 62.247 | 792 | 289 | 5 | 52 | 839 | 55 | 840 | 0.0 | 1036 |
MS.gene038603.t1 | MTR_4g129270 | 63.338 | 701 | 251 | 4 | 52 | 748 | 55 | 753 | 0.0 | 930 |
MS.gene038603.t1 | MTR_3g078210 | 60.053 | 751 | 299 | 1 | 77 | 827 | 3 | 752 | 0.0 | 926 |
MS.gene038603.t1 | MTR_3g467030 | 54.348 | 598 | 243 | 3 | 56 | 653 | 2 | 569 | 0.0 | 625 |
MS.gene038603.t1 | MTR_2g073260 | 34.207 | 763 | 426 | 21 | 52 | 787 | 122 | 835 | 1.43e-134 | 425 |
MS.gene038603.t1 | MTR_0034s0170 | 34.165 | 802 | 434 | 23 | 52 | 814 | 83 | 829 | 5.42e-132 | 417 |
MS.gene038603.t1 | MTR_8g087910 | 36.023 | 347 | 199 | 5 | 36 | 374 | 53 | 384 | 8.82e-68 | 231 |
MS.gene038603.t1 | MTR_3g076810 | 51.955 | 179 | 72 | 4 | 8 | 186 | 6 | 170 | 7.82e-52 | 179 |
MS.gene038603.t1 | MTR_8g087930 | 30.892 | 437 | 248 | 13 | 381 | 800 | 10 | 409 | 3.81e-50 | 185 |
MS.gene038603.t1 | MTR_3g467040 | 56.075 | 107 | 47 | 0 | 477 | 583 | 110 | 216 | 7.12e-33 | 127 |
MS.gene038603.t1 | MTR_3g467040 | 48.624 | 109 | 56 | 0 | 302 | 410 | 1 | 109 | 3.13e-27 | 111 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038603.t1 | AT1G23870 | 74.510 | 867 | 209 | 3 | 1 | 855 | 1 | 867 | 0.0 | 1370 |
MS.gene038603.t1 | AT1G70290 | 72.992 | 859 | 225 | 3 | 1 | 855 | 1 | 856 | 0.0 | 1338 |
MS.gene038603.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
MS.gene038603.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
MS.gene038603.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
MS.gene038603.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
MS.gene038603.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
MS.gene038603.t1 | AT1G70290 | 68.685 | 859 | 224 | 4 | 1 | 855 | 1 | 818 | 0.0 | 1241 |
MS.gene038603.t1 | AT1G60140 | 73.580 | 757 | 194 | 1 | 1 | 751 | 1 | 757 | 0.0 | 1195 |
MS.gene038603.t1 | AT4G17770 | 64.852 | 845 | 289 | 2 | 1 | 838 | 1 | 844 | 0.0 | 1177 |
MS.gene038603.t1 | AT4G17770 | 64.852 | 845 | 289 | 2 | 1 | 838 | 1 | 844 | 0.0 | 1177 |
MS.gene038603.t1 | AT1G68020 | 64.019 | 856 | 291 | 4 | 1 | 839 | 1 | 856 | 0.0 | 1156 |
MS.gene038603.t1 | AT1G68020 | 64.019 | 856 | 291 | 4 | 1 | 839 | 1 | 856 | 0.0 | 1156 |
MS.gene038603.t1 | AT1G06410 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1126 |
MS.gene038603.t1 | AT1G06410 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1126 |
MS.gene038603.t1 | AT1G06410 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1126 |
MS.gene038603.t1 | AT2G18700 | 60.327 | 857 | 326 | 6 | 1 | 851 | 1 | 849 | 0.0 | 1080 |
MS.gene038603.t1 | AT1G68020 | 63.476 | 679 | 231 | 4 | 1 | 662 | 1 | 679 | 0.0 | 915 |
MS.gene038603.t1 | AT1G16980 | 35.688 | 807 | 458 | 24 | 48 | 834 | 7 | 772 | 7.05e-146 | 451 |
MS.gene038603.t1 | AT4G27550 | 33.052 | 829 | 469 | 22 | 51 | 838 | 2 | 785 | 2.38e-133 | 417 |
MS.gene038603.t1 | AT4G27550 | 32.931 | 829 | 477 | 22 | 52 | 838 | 3 | 794 | 1.25e-132 | 416 |
MS.gene038603.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
MS.gene038603.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
MS.gene038603.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
MS.gene038603.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
MS.gene038603.t1 | AT1G16980 | 35.266 | 638 | 362 | 18 | 48 | 675 | 7 | 603 | 1.43e-118 | 374 |
Find 205 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAACTTCACCCTGCAAATT+TGG | 0.106547 | 8.3:-38517448 | None:intergenic |
TGGGGAATTGGTCTGGGCTT+GGG | 0.169334 | 8.3:+38518027 | MS.gene038603:CDS |
AAAAGGATCAATGAAATTTA+TGG | 0.184333 | 8.3:+38517550 | MS.gene038603:CDS |
CTGGGGAATTGGTCTGGGCT+TGG | 0.187166 | 8.3:+38518026 | MS.gene038603:CDS |
CAAGATGCAGACCCTGATTT+TGG | 0.207528 | 8.3:+38518583 | MS.gene038603:CDS |
CCAAGGGTTATGACTGTTCC+TGG | 0.261011 | 8.3:+38516458 | MS.gene038603:CDS |
ATAAATTTCATTGATCCTTT+TGG | 0.261126 | 8.3:-38517548 | None:intergenic |
GGGGAATTGGTCTGGGCTTG+GGG | 0.266295 | 8.3:+38518028 | MS.gene038603:CDS |
ATAAATCCTGCAAGGGGTTC+AGG | 0.270561 | 8.3:+38517484 | MS.gene038603:CDS |
TTGAGAATTTCATCCCTTAC+TGG | 0.274615 | 8.3:-38517085 | None:intergenic |
CTCTAAGCTAAAAGAGATTC+AGG | 0.278734 | 8.3:+38517321 | MS.gene038603:CDS |
CTTCTCTGAGTGGGGCCATC+AGG | 0.282889 | 8.3:+38517815 | MS.gene038603:CDS |
AAAGATAAGAAAGTTATTCT+TGG | 0.285155 | 8.3:+38517352 | MS.gene038603:CDS |
CTGGAATTGGGCAAGATGTT+TGG | 0.285774 | 8.3:-38519090 | None:intergenic |
GAATCAGATGTTAGTTCTTC+TGG | 0.292836 | 8.3:+38516503 | MS.gene038603:CDS |
GCAAAGATCATTATACTAAA+AGG | 0.294692 | 8.3:+38518001 | MS.gene038603:CDS |
CAAGTGGTCCAGCAATTCTT+TGG | 0.301605 | 8.3:-38518617 | None:intergenic |
ATAACCCTTGGAAGACTTCT+TGG | 0.323153 | 8.3:-38516446 | None:intergenic |
TGAGAAGGTTCTCTTGAATA+TGG | 0.324266 | 8.3:+38518836 | MS.gene038603:CDS |
TACTCATGATGTGGCATATT+GGG | 0.324520 | 8.3:+38517945 | MS.gene038603:CDS |
TCCCATCATCTGAAATTTAC+CGG | 0.324934 | 8.3:+38517056 | MS.gene038603:CDS |
CAGCAATTCTTTGGCTTGGC+AGG | 0.325831 | 8.3:-38518608 | None:intergenic |
CAACTTCACCCTGCAAATTT+GGG | 0.326749 | 8.3:-38517447 | None:intergenic |
CACGAAATCTGGTGGATTAC+CGG | 0.327222 | 8.3:-38518865 | None:intergenic |
TCCTTCCCTGAACCCCTTGC+AGG | 0.330095 | 8.3:-38517490 | None:intergenic |
AATATTGTGTTCATTGTTAG+TGG | 0.330780 | 8.3:+38518243 | MS.gene038603:CDS |
TTTAGTATAATGATCTTTGC+AGG | 0.332751 | 8.3:-38517998 | None:intergenic |
GCTTGGCAGGAGCCAAAATC+AGG | 0.332771 | 8.3:-38518595 | None:intergenic |
ACTAAAAGGTGCTGGGGAAT+TGG | 0.344491 | 8.3:+38518015 | MS.gene038603:CDS |
TCTCAAAAGAAACCTGGAAT+TGG | 0.347950 | 8.3:-38519103 | None:intergenic |
AAGGTGCTGGGGAATTGGTC+TGG | 0.348234 | 8.3:+38518020 | MS.gene038603:CDS |
TGGAATTGGGCAAGATGTTT+GGG | 0.350397 | 8.3:-38519089 | None:intergenic |
CTTGTTGTGTCTGAGTTCAT+TGG | 0.350593 | 8.3:+38517784 | MS.gene038603:CDS |
GAGATATTGATACTGCTAAA+TGG | 0.353153 | 8.3:+38516579 | MS.gene038603:CDS |
CCAATGCACATCACGAAATC+TGG | 0.354845 | 8.3:-38518876 | None:intergenic |
CGATTTCATCGAGTTAAACT+TGG | 0.356832 | 8.3:+38517013 | MS.gene038603:CDS |
GGGTTCAGGGAAGGATGTTC+AGG | 0.357166 | 8.3:+38517498 | MS.gene038603:CDS |
TTGTTGAATTCGGATTTAAT+TGG | 0.359446 | 8.3:+38517112 | MS.gene038603:CDS |
ATTTGTTTGCGGATCTTGAT+TGG | 0.360978 | 8.3:+38518467 | MS.gene038603:CDS |
TTAAGCACAGATATGACTTC+AGG | 0.363121 | 8.3:-38518198 | None:intergenic |
GGGATTATTTCTGACCTTGA+TGG | 0.367224 | 8.3:+38516479 | MS.gene038603:CDS |
CTGCCAAGCCAAAGAATTGC+TGG | 0.368870 | 8.3:+38518609 | MS.gene038603:CDS |
TCTCAAAGGATTGTTGAATT+CGG | 0.369451 | 8.3:+38517102 | MS.gene038603:CDS |
CATACAAAAGAACTAGTAGA+AGG | 0.371718 | 8.3:+38518112 | MS.gene038603:CDS |
ATAAGCACTCTTCTCGAAAC+GGG | 0.382221 | 8.3:-38517617 | None:intergenic |
TTTAGCTTAGAGGATGTAGA+AGG | 0.386302 | 8.3:-38517310 | None:intergenic |
AGCATATGGGTAGCATATAA+TGG | 0.386638 | 8.3:-38516832 | None:intergenic |
CAAACATCTTGCCCAATTCC+AGG | 0.387739 | 8.3:+38519091 | MS.gene038603:CDS |
GGGCCATCAGGGTCAATCCC+TGG | 0.389275 | 8.3:+38517827 | MS.gene038603:CDS |
TAACCCTTGGAAGACTTCTT+GGG | 0.392932 | 8.3:-38516445 | None:intergenic |
TATGAATTTAGCCCTCAGTA+TGG | 0.393080 | 8.3:+38517873 | MS.gene038603:CDS |
ATTCTATTACAATTAAAAGA+TGG | 0.393081 | 8.3:+38516626 | MS.gene038603:CDS |
GCAGCAGAACCCAAATTTGC+AGG | 0.398626 | 8.3:+38517438 | MS.gene038603:CDS |
GATGTTGTAAAGTTGCTTGA+TGG | 0.401203 | 8.3:+38519041 | MS.gene038603:CDS |
CTGCAAACAATATATTTGTA+TGG | 0.405626 | 8.3:-38517697 | None:intergenic |
GAATCTAAGCGCGGACATAT+AGG | 0.407020 | 8.3:+38517202 | MS.gene038603:CDS |
CTTCTCAGCTACCAAACCTT+TGG | 0.411552 | 8.3:-38518820 | None:intergenic |
GCCATCTTTCTTGATTATGA+TGG | 0.412733 | 8.3:+38518135 | MS.gene038603:CDS |
ATCATTATACTAAAAGGTGC+TGG | 0.413565 | 8.3:+38518007 | MS.gene038603:CDS |
GTTGTTCACCTTCTCTGAGT+GGG | 0.416077 | 8.3:+38517806 | MS.gene038603:CDS |
TTCTATTACAATTAAAAGAT+GGG | 0.419809 | 8.3:+38516627 | MS.gene038603:CDS |
GTCCGGTAAATTTCAGATGA+TGG | 0.420016 | 8.3:-38517058 | None:intergenic |
ATCACCATGATCTGAGCATA+TGG | 0.421283 | 8.3:-38516846 | None:intergenic |
CTCAAAAGAAACCTGGAATT+GGG | 0.424009 | 8.3:-38519102 | None:intergenic |
TGAAATTGCTCAGAGATTAC+TGG | 0.424931 | 8.3:+38516718 | MS.gene038603:CDS |
GTACTCATGATGTGGCATAT+TGG | 0.429323 | 8.3:+38517944 | MS.gene038603:CDS |
CAAGAGATTCTCTGAATGAA+TGG | 0.436703 | 8.3:+38518271 | MS.gene038603:CDS |
CAATATATTTGTATGGGACT+AGG | 0.441769 | 8.3:-38517690 | None:intergenic |
CTGCTAAATGGTGTTTCAGT+TGG | 0.444648 | 8.3:+38516591 | MS.gene038603:CDS |
CAAATATATTGTTTGCAGAC+AGG | 0.445837 | 8.3:+38517702 | MS.gene038603:CDS |
CTTTGACCGAGTGCTTTGGC+AGG | 0.445978 | 8.3:+38516871 | MS.gene038603:CDS |
TTTACCGGACTTTGCCAGTA+AGG | 0.446014 | 8.3:+38517071 | MS.gene038603:CDS |
CAGACAGGGAACTGCAAAGC+TGG | 0.446931 | 8.3:+38517717 | MS.gene038603:CDS |
ATGTTAGTTCTTCTGGATGT+CGG | 0.447873 | 8.3:+38516510 | MS.gene038603:CDS |
CTGCAGGTCATGGGGTAGAA+AGG | 0.448467 | 8.3:-38516762 | None:intergenic |
GGTGGAATAGCGACTCTGAA+TGG | 0.451271 | 8.3:+38518434 | MS.gene038603:intron |
ATCGCTTTGACCGAGTGCTT+TGG | 0.451315 | 8.3:+38516867 | MS.gene038603:CDS |
TGCGGATCTTGATTGGAAAC+AGG | 0.453319 | 8.3:+38518474 | MS.gene038603:CDS |
CATATAGGACTTGATTACTT+TGG | 0.456053 | 8.3:+38517217 | MS.gene038603:CDS |
ACAGGGAGTAACCAAAGGTT+TGG | 0.457006 | 8.3:+38518809 | MS.gene038603:intron |
GTTTACATCATGCAAACTGC+TGG | 0.460290 | 8.3:+38518293 | MS.gene038603:CDS |
CCAGATTTCGTGATGTGCAT+TGG | 0.463267 | 8.3:+38518876 | MS.gene038603:CDS |
GGCAAACATGTTGCCGCTGC+AGG | 0.463803 | 8.3:+38516550 | MS.gene038603:CDS |
TGAAGTCAAGGAAAGTGCTT+TGG | 0.467204 | 8.3:+38518549 | MS.gene038603:CDS |
TAAATCCTGCAAGGGGTTCA+GGG | 0.467451 | 8.3:+38517485 | MS.gene038603:CDS |
CACAGATATGACTTCAGGGC+TGG | 0.467927 | 8.3:-38518193 | None:intergenic |
TGTTAGTTCTTCTGGATGTC+GGG | 0.472937 | 8.3:+38516511 | MS.gene038603:CDS |
CAAAGGTTTGGTAGCTGAGA+AGG | 0.472991 | 8.3:+38518821 | MS.gene038603:CDS |
AGGTGCTGGGGAATTGGTCT+GGG | 0.473831 | 8.3:+38518021 | MS.gene038603:CDS |
CTGTGCTCTCAAAAGAAACC+TGG | 0.476062 | 8.3:-38519109 | None:intergenic |
AGAGTTATTTCACTTTCTCA+TGG | 0.477242 | 8.3:+38518054 | MS.gene038603:CDS |
CTGCAGTAGAATGCTAGGTC+TGG | 0.477809 | 8.3:+38517174 | MS.gene038603:CDS |
AAGCTTATTTAATTGCCAAA+AGG | 0.478363 | 8.3:+38517533 | MS.gene038603:CDS |
GTTGCATCGTCAATGCTGTA+AGG | 0.478965 | 8.3:+38517656 | MS.gene038603:CDS |
TTCTCTGAGTGGGGCCATCA+GGG | 0.481545 | 8.3:+38517816 | MS.gene038603:CDS |
ATGAATTTAGCCCTCAGTAT+GGG | 0.482655 | 8.3:+38517874 | MS.gene038603:CDS |
CAAGGGTTATGACTGTTCCT+GGG | 0.488044 | 8.3:+38516459 | MS.gene038603:CDS |
CAAAGAATTGCTGGACCACT+TGG | 0.490557 | 8.3:+38518618 | MS.gene038603:CDS |
TCTTGCTGCAGTAGAATGCT+AGG | 0.494534 | 8.3:+38517169 | MS.gene038603:CDS |
TTGTGTTCATTGTTAGTGGA+AGG | 0.496110 | 8.3:+38518247 | MS.gene038603:CDS |
AGCAACTGCATCTATATCCC+AGG | 0.496254 | 8.3:-38517845 | None:intergenic |
TCCGGTAAATTTCAGATGAT+GGG | 0.500703 | 8.3:-38517057 | None:intergenic |
TCAAATTATAAATCCTGCAA+GGG | 0.500735 | 8.3:+38517477 | MS.gene038603:CDS |
TCTGTATACGACTGCATGAC+AGG | 0.500792 | 8.3:-38518505 | None:intergenic |
GGTCCAGCAATTCTTTGGCT+TGG | 0.501011 | 8.3:-38518612 | None:intergenic |
ACCCAAACAAAATCATCATC+GGG | 0.501271 | 8.3:-38516947 | None:intergenic |
TGCTAAATGGTGTTTCAGTT+GGG | 0.502656 | 8.3:+38516592 | MS.gene038603:CDS |
CATCCCTTACTGGCAAAGTC+CGG | 0.504874 | 8.3:-38517075 | None:intergenic |
CTCTTGAATATGGTTAATGC+CGG | 0.507275 | 8.3:+38518846 | MS.gene038603:CDS |
AATAAGCACTCTTCTCGAAA+CGG | 0.515130 | 8.3:-38517618 | None:intergenic |
CTACCCATATGCTCAGATCA+TGG | 0.515637 | 8.3:+38516842 | MS.gene038603:CDS |
AACCCAAACAAAATCATCAT+CGG | 0.516929 | 8.3:-38516948 | None:intergenic |
GAACCAGCAATTGTTAAAAG+AGG | 0.517681 | 8.3:+38518658 | MS.gene038603:CDS |
ACAGATATGACTTCAGGGCT+GGG | 0.520588 | 8.3:-38518192 | None:intergenic |
GTGGAATAGCGACTCTGAAT+GGG | 0.520863 | 8.3:+38518435 | MS.gene038603:CDS |
AAATATATTGTTTGCAGACA+GGG | 0.522683 | 8.3:+38517703 | MS.gene038603:CDS |
ATGGTGTTTCAGTTGGGATG+AGG | 0.523696 | 8.3:+38516598 | MS.gene038603:CDS |
TAAGCACAGATATGACTTCA+GGG | 0.524391 | 8.3:-38518197 | None:intergenic |
GGCCATCAGGGTCAATCCCT+GGG | 0.525071 | 8.3:+38517828 | MS.gene038603:CDS |
GTTCTTCTGGATGTCGGGAG+CGG | 0.526826 | 8.3:+38516516 | MS.gene038603:CDS |
TCATTATACTAAAAGGTGCT+GGG | 0.528112 | 8.3:+38518008 | MS.gene038603:CDS |
TGCTGATACAATATGGTCAA+TGG | 0.528241 | 8.3:-38518091 | None:intergenic |
GGAAACAAGTCATTTGTTTG+CGG | 0.528499 | 8.3:+38518456 | MS.gene038603:CDS |
TTCAAATTATAAATCCTGCA+AGG | 0.529329 | 8.3:+38517476 | MS.gene038603:CDS |
ATCGTCAATGCTGTAAGGGA+TGG | 0.532615 | 8.3:+38517661 | MS.gene038603:CDS |
TGGATCTAATATTGAAGTCA+AGG | 0.535654 | 8.3:+38518537 | MS.gene038603:CDS |
TGAGATAGATGCTAGTGAGC+AGG | 0.537498 | 8.3:+38516694 | MS.gene038603:CDS |
CCAGGAACAGTCATAACCCT+TGG | 0.540553 | 8.3:-38516458 | None:intergenic |
GCTTAACTTCAACAATATGC+TGG | 0.541548 | 8.3:-38518681 | None:intergenic |
CAATCTGAAATTTCTAGCTG+TGG | 0.541729 | 8.3:+38517405 | MS.gene038603:CDS |
GCCATCATAATCAAGAAAGA+TGG | 0.544414 | 8.3:-38518136 | None:intergenic |
TTGTTCACCTTCTCTGAGTG+GGG | 0.546280 | 8.3:+38517807 | MS.gene038603:CDS |
TGTGTTCATTGTTAGTGGAA+GGG | 0.547481 | 8.3:+38518248 | MS.gene038603:CDS |
TATTGTTGAAGTTAAGCCAC+AGG | 0.548984 | 8.3:+38518687 | MS.gene038603:CDS |
CAGATATGACTTCAGGGCTG+GGG | 0.549497 | 8.3:-38518191 | None:intergenic |
CTGGGACTTGCAGCTGAACA+TGG | 0.550416 | 8.3:+38518312 | MS.gene038603:CDS |
AATCGTTTCCTCAAGAAAGT+AGG | 0.550967 | 8.3:-38516995 | None:intergenic |
TAAGAAAGTTATTCTTGGTG+TGG | 0.551636 | 8.3:+38517357 | MS.gene038603:CDS |
TGAATTTAGCCCTCAGTATG+GGG | 0.553092 | 8.3:+38517875 | MS.gene038603:CDS |
TGCAAACAATATATTTGTAT+GGG | 0.553617 | 8.3:-38517696 | None:intergenic |
GGAAGACTTCTTGGGGTGTG+AGG | 0.553746 | 8.3:-38516437 | None:intergenic |
TGCAAAGCTGGATGAAGCTG+TGG | 0.555064 | 8.3:+38517729 | MS.gene038603:CDS |
AGCATCTATCTCAACCTTGA+GGG | 0.558399 | 8.3:-38516684 | None:intergenic |
TTACCGGACTTTGCCAGTAA+GGG | 0.558832 | 8.3:+38517072 | MS.gene038603:CDS |
CATAAGCCTGCCAAAGCACT+CGG | 0.561670 | 8.3:-38516877 | None:intergenic |
TGATACTGAGGTAATCTATG+TGG | 0.564061 | 8.3:+38516658 | MS.gene038603:CDS |
TCACCATGATCTGAGCATAT+GGG | 0.565672 | 8.3:-38516845 | None:intergenic |
GAGCGGTCAATGATAATGAC+TGG | 0.567271 | 8.3:-38517589 | None:intergenic |
TCAAGGTCAGAAATAATCCC+AGG | 0.567364 | 8.3:-38516476 | None:intergenic |
TCCTGCAAGGGGTTCAGGGA+AGG | 0.568476 | 8.3:+38517489 | MS.gene038603:CDS |
GGTTGTTCACCTTCTCTGAG+TGG | 0.569153 | 8.3:+38517805 | MS.gene038603:CDS |
GATTTCATCGAGTTAAACTT+GGG | 0.570858 | 8.3:+38517014 | MS.gene038603:CDS |
CAGGATTTATAATTTGAACA+AGG | 0.572858 | 8.3:-38517471 | None:intergenic |
AATATTTGCAGACAAAGTCA+TGG | 0.573166 | 8.3:+38516913 | MS.gene038603:CDS |
GATACTGAGGTAATCTATGT+GGG | 0.575365 | 8.3:+38516659 | MS.gene038603:CDS |
TATTCTTGGTGTGGACGACA+TGG | 0.577773 | 8.3:+38517366 | MS.gene038603:CDS |
AGATATGACTTCAGGGCTGG+GGG | 0.578681 | 8.3:-38518190 | None:intergenic |
AATCTATGTGGGTTCCCTCA+AGG | 0.580394 | 8.3:+38516670 | MS.gene038603:CDS |
CATATCGATAGTGTTTCTCA+TGG | 0.584215 | 8.3:-38517918 | None:intergenic |
TCTTTACAGGGAGTAACCAA+AGG | 0.585367 | 8.3:+38518804 | MS.gene038603:intron |
TTTGATTTGTTGAGGTAGCG+AGG | 0.586241 | 8.3:-38519064 | None:intergenic |
CGGTAGGAATTCACATGGGT+AGG | 0.588120 | 8.3:+38517266 | MS.gene038603:CDS |
ATCCCAGGGATTGACCCTGA+TGG | 0.588505 | 8.3:-38517830 | None:intergenic |
ATACAAAAGAACTAGTAGAA+GGG | 0.590862 | 8.3:+38518113 | MS.gene038603:CDS |
AACCCTTGGAAGACTTCTTG+GGG | 0.592251 | 8.3:-38516444 | None:intergenic |
TCGTATACAGAAGCAACTGA+TGG | 0.593251 | 8.3:+38518517 | MS.gene038603:CDS |
ACACCCCAAGAAGTCTTCCA+AGG | 0.595682 | 8.3:+38516441 | MS.gene038603:CDS |
CTACCCATGTGAATTCCTAC+CGG | 0.597503 | 8.3:-38517265 | None:intergenic |
CGGGAGCTGATGGTAACGAC+GGG | 0.607532 | 8.3:-38518953 | None:intergenic |
TAGCATCTATCTCAACCTTG+AGG | 0.607564 | 8.3:-38516685 | None:intergenic |
TAAATTTCAGATGATGGGAA+AGG | 0.607697 | 8.3:-38517052 | None:intergenic |
GTAAGGGATGAAATTCTCAA+AGG | 0.608917 | 8.3:+38517088 | MS.gene038603:CDS |
CAAATTATAAATCCTGCAAG+GGG | 0.610053 | 8.3:+38517478 | MS.gene038603:CDS |
TTTACATCATGCAAACTGCT+GGG | 0.611466 | 8.3:+38518294 | MS.gene038603:CDS |
ATGCACATCACGAAATCTGG+TGG | 0.613992 | 8.3:-38518873 | None:intergenic |
CTGATGGCCCCACTCAGAGA+AGG | 0.614227 | 8.3:-38517814 | None:intergenic |
TGATGTGCATTGGAGATGAT+AGG | 0.616649 | 8.3:+38518886 | MS.gene038603:CDS |
CATTATACTAAAAGGTGCTG+GGG | 0.617606 | 8.3:+38518009 | MS.gene038603:CDS |
CAGCAGAACCCAAATTTGCA+GGG | 0.618312 | 8.3:+38517439 | MS.gene038603:CDS |
TAACATCTGATTCACCATCA+AGG | 0.622114 | 8.3:-38516493 | None:intergenic |
ATATGTTAGTACTCATGATG+TGG | 0.622726 | 8.3:+38517936 | MS.gene038603:CDS |
CAGGTCATGGGGTAGAAAGG+TGG | 0.624978 | 8.3:-38516759 | None:intergenic |
ACTGGATGACTTTAATTGCG+TGG | 0.625192 | 8.3:+38516736 | MS.gene038603:CDS |
CTTGGCAGGAGCCAAAATCA+GGG | 0.629827 | 8.3:-38518594 | None:intergenic |
TCGTCAATGCTGTAAGGGAT+GGG | 0.634025 | 8.3:+38517662 | MS.gene038603:CDS |
GAATTTAGCCCTCAGTATGG+GGG | 0.635859 | 8.3:+38517876 | MS.gene038603:CDS |
GGTAGGTAGGAAGCCTAGCA+AGG | 0.637239 | 8.3:+38518992 | MS.gene038603:CDS |
GGTAGCATATAATGGAAGAG+AGG | 0.639482 | 8.3:-38516824 | None:intergenic |
AAGTAGGCAAAATCATCAAG+TGG | 0.641749 | 8.3:-38516979 | None:intergenic |
CACCCCAAGAAGTCTTCCAA+GGG | 0.641869 | 8.3:+38516442 | MS.gene038603:CDS |
GCAACTGCATCTATATCCCA+GGG | 0.642398 | 8.3:-38517844 | None:intergenic |
TCAAGGAAAGTGCTTTGGTG+TGG | 0.650646 | 8.3:+38518554 | MS.gene038603:CDS |
TAGCAAGAACACTTTCCAAG+TGG | 0.651389 | 8.3:-38518633 | None:intergenic |
TCGGGAGCTGATGGTAACGA+CGG | 0.659800 | 8.3:-38518954 | None:intergenic |
TTTGCCGGTAGGAATTCACA+TGG | 0.662631 | 8.3:+38517261 | MS.gene038603:CDS |
TTGCATCGTCAATGCTGTAA+GGG | 0.663687 | 8.3:+38517657 | MS.gene038603:CDS |
TAAGCACTCTTCTCGAAACG+GGG | 0.682811 | 8.3:-38517616 | None:intergenic |
GCAAAGCTGGATGAAGCTGT+GGG | 0.684464 | 8.3:+38517730 | MS.gene038603:CDS |
ACAACAAGCATGCTTGTACG+AGG | 0.685754 | 8.3:-38517769 | None:intergenic |
TCGGGAGCGGAAAATCATTG+TGG | 0.689766 | 8.3:+38516529 | MS.gene038603:CDS |
TCTCGAAACGGGGAACAGAG+CGG | 0.692951 | 8.3:-38517606 | None:intergenic |
ATGATGGGAAAGGACTGTGA+AGG | 0.694384 | 8.3:-38517042 | None:intergenic |
GGATCTTGATTGGAAACAGG+TGG | 0.695331 | 8.3:+38518477 | MS.gene038603:CDS |
CTGGACTATGAATCTAAGCG+CGG | 0.708845 | 8.3:+38517193 | MS.gene038603:CDS |
TTGCCGGTAGGAATTCACAT+GGG | 0.730503 | 8.3:+38517262 | MS.gene038603:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTTTTCTATTTTCTTT+TGG | - | chr8.3:38518387-38518406 | None:intergenic | 10.0% |
!! | ATTCTATTACAATTAAAAGA+TGG | + | chr8.3:38516626-38516645 | MS.gene038603:CDS | 15.0% |
!! | TTCTATTACAATTAAAAGAT+GGG | + | chr8.3:38516627-38516646 | MS.gene038603:CDS | 15.0% |
!!! | AAATTTTGATAAATATAGTG+CGG | - | chr8.3:38517243-38517262 | None:intergenic | 15.0% |
!!! | GTTTTATTAATATAAGATTG+TGG | - | chr8.3:38518171-38518190 | None:intergenic | 15.0% |
!!! | TAATGTATTTTTTTATTTGC+AGG | + | chr8.3:38518413-38518432 | MS.gene038603:intron | 15.0% |
!!! | TATATTTATCAAAATTTTGC+CGG | + | chr8.3:38517246-38517265 | MS.gene038603:CDS | 15.0% |
!! | AAAAGGATCAATGAAATTTA+TGG | + | chr8.3:38517550-38517569 | MS.gene038603:CDS | 20.0% |
!! | AAAGATAAGAAAGTTATTCT+TGG | + | chr8.3:38517352-38517371 | MS.gene038603:CDS | 20.0% |
!! | GTTTCACTTAATATAAATAG+AGG | - | chr8.3:38518744-38518763 | None:intergenic | 20.0% |
!! | TGCAAACAATATATTTGTAT+GGG | - | chr8.3:38517699-38517718 | None:intergenic | 20.0% |
!!! | AACAATGAACACAATATTTT+TGG | - | chr8.3:38518241-38518260 | None:intergenic | 20.0% |
!!! | ATAAATTTCATTGATCCTTT+TGG | - | chr8.3:38517551-38517570 | None:intergenic | 20.0% |
!!! | TTTTTCTATTTTCTTTTGGT+GGG | - | chr8.3:38518383-38518402 | None:intergenic | 20.0% |
!!! | TTTTTTCTATTTTCTTTTGG+TGG | - | chr8.3:38518384-38518403 | None:intergenic | 20.0% |
! | AAATATATTGTTTGCAGACA+GGG | + | chr8.3:38517703-38517722 | MS.gene038603:CDS | 25.0% |
! | AAGCTTATTTAATTGCCAAA+AGG | + | chr8.3:38517533-38517552 | MS.gene038603:CDS | 25.0% |
! | AATATTGTGTTCATTGTTAG+TGG | + | chr8.3:38518243-38518262 | MS.gene038603:CDS | 25.0% |
! | ATACAAAAGAACTAGTAGAA+GGG | + | chr8.3:38518113-38518132 | MS.gene038603:CDS | 25.0% |
! | CAGGATTTATAATTTGAACA+AGG | - | chr8.3:38517474-38517493 | None:intergenic | 25.0% |
! | CTGCAAACAATATATTTGTA+TGG | - | chr8.3:38517700-38517719 | None:intergenic | 25.0% |
! | GCAAAGATCATTATACTAAA+AGG | + | chr8.3:38518001-38518020 | MS.gene038603:CDS | 25.0% |
! | TCAAATTATAAATCCTGCAA+GGG | + | chr8.3:38517477-38517496 | MS.gene038603:CDS | 25.0% |
! | TTCAAATTATAAATCCTGCA+AGG | + | chr8.3:38517476-38517495 | MS.gene038603:CDS | 25.0% |
! | TTGTTGAATTCGGATTTAAT+TGG | + | chr8.3:38517112-38517131 | MS.gene038603:CDS | 25.0% |
! | TTTAGTATAATGATCTTTGC+AGG | - | chr8.3:38518001-38518020 | None:intergenic | 25.0% |
!! | TCATGAATTTTCTCTTTACA+GGG | + | chr8.3:38518792-38518811 | MS.gene038603:intron | 25.0% |
!! | TTTTCTATTTTCTTTTGGTG+GGG | - | chr8.3:38518382-38518401 | None:intergenic | 25.0% |
!! | TTTTGTATGCTGATACAATA+TGG | - | chr8.3:38518101-38518120 | None:intergenic | 25.0% |
!!! | TGTATTTTTTTATTTGCAGG+TGG | + | chr8.3:38518416-38518435 | MS.gene038603:intron | 25.0% |
AACCCAAACAAAATCATCAT+CGG | - | chr8.3:38516951-38516970 | None:intergenic | 30.0% | |
AATATTTGCAGACAAAGTCA+TGG | + | chr8.3:38516913-38516932 | MS.gene038603:CDS | 30.0% | |
AATTTGAAAAACTCTACCTG+TGG | - | chr8.3:38518706-38518725 | None:intergenic | 30.0% | |
ATATGTTAGTACTCATGATG+TGG | + | chr8.3:38517936-38517955 | MS.gene038603:CDS | 30.0% | |
CAAATATATTGTTTGCAGAC+AGG | + | chr8.3:38517702-38517721 | MS.gene038603:CDS | 30.0% | |
CAAATTATAAATCCTGCAAG+GGG | + | chr8.3:38517478-38517497 | MS.gene038603:CDS | 30.0% | |
CAATATATTTGTATGGGACT+AGG | - | chr8.3:38517693-38517712 | None:intergenic | 30.0% | |
CATACAAAAGAACTAGTAGA+AGG | + | chr8.3:38518112-38518131 | MS.gene038603:CDS | 30.0% | |
CATATAGGACTTGATTACTT+TGG | + | chr8.3:38517217-38517236 | MS.gene038603:CDS | 30.0% | |
GAGATATTGATACTGCTAAA+TGG | + | chr8.3:38516579-38516598 | MS.gene038603:CDS | 30.0% | |
GATTTCATCGAGTTAAACTT+GGG | + | chr8.3:38517014-38517033 | MS.gene038603:CDS | 30.0% | |
TAAGAAAGTTATTCTTGGTG+TGG | + | chr8.3:38517357-38517376 | MS.gene038603:CDS | 30.0% | |
TCTCAAAGGATTGTTGAATT+CGG | + | chr8.3:38517102-38517121 | MS.gene038603:CDS | 30.0% | |
TGGATCTAATATTGAAGTCA+AGG | + | chr8.3:38518537-38518556 | MS.gene038603:CDS | 30.0% | |
! | AGAAAATATTTTGCCTTGCT+AGG | - | chr8.3:38519008-38519027 | None:intergenic | 30.0% |
! | AGAGTTATTTCACTTTCTCA+TGG | + | chr8.3:38518054-38518073 | MS.gene038603:CDS | 30.0% |
! | ATCATTATACTAAAAGGTGC+TGG | + | chr8.3:38518007-38518026 | MS.gene038603:CDS | 30.0% |
! | GTCATGAATTTTCTCTTTAC+AGG | + | chr8.3:38518791-38518810 | MS.gene038603:intron | 30.0% |
! | TTTATCAAAATTTTGCCGGT+AGG | + | chr8.3:38517250-38517269 | MS.gene038603:CDS | 30.0% |
! | TTTCACTTTCTCATGGTTTT+AGG | + | chr8.3:38518061-38518080 | MS.gene038603:CDS | 30.0% |
!! | GACGACATGGATATTTTTAA+GGG | + | chr8.3:38517379-38517398 | MS.gene038603:CDS | 30.0% |
!! | TAAATTTCAGATGATGGGAA+AGG | - | chr8.3:38517055-38517074 | None:intergenic | 30.0% |
!! | TCATTATACTAAAAGGTGCT+GGG | + | chr8.3:38518008-38518027 | MS.gene038603:CDS | 30.0% |
!!! | CTGAACATGGTTACTTTTTA+AGG | + | chr8.3:38518325-38518344 | MS.gene038603:CDS | 30.0% |
AAGTAGGCAAAATCATCAAG+TGG | - | chr8.3:38516982-38517001 | None:intergenic | 35.0% | |
AATAAGCACTCTTCTCGAAA+CGG | - | chr8.3:38517621-38517640 | None:intergenic | 35.0% | |
AATCGTTTCCTCAAGAAAGT+AGG | - | chr8.3:38516998-38517017 | None:intergenic | 35.0% | |
ACCCAAACAAAATCATCATC+GGG | - | chr8.3:38516950-38516969 | None:intergenic | 35.0% | |
AGCATATGGGTAGCATATAA+TGG | - | chr8.3:38516835-38516854 | None:intergenic | 35.0% | |
ATGAATTTAGCCCTCAGTAT+GGG | + | chr8.3:38517874-38517893 | MS.gene038603:CDS | 35.0% | |
ATTTGTTTGCGGATCTTGAT+TGG | + | chr8.3:38518467-38518486 | MS.gene038603:CDS | 35.0% | |
CAAGAGATTCTCTGAATGAA+TGG | + | chr8.3:38518271-38518290 | MS.gene038603:CDS | 35.0% | |
CATATCGATAGTGTTTCTCA+TGG | - | chr8.3:38517921-38517940 | None:intergenic | 35.0% | |
CGATTTCATCGAGTTAAACT+TGG | + | chr8.3:38517013-38517032 | MS.gene038603:CDS | 35.0% | |
CTCAAAAGAAACCTGGAATT+GGG | - | chr8.3:38519105-38519124 | None:intergenic | 35.0% | |
CTCTAAGCTAAAAGAGATTC+AGG | + | chr8.3:38517321-38517340 | MS.gene038603:CDS | 35.0% | |
CTCTTGAATATGGTTAATGC+CGG | + | chr8.3:38518846-38518865 | MS.gene038603:CDS | 35.0% | |
CTGCAGAAAAAGTTCTATCT+TGG | + | chr8.3:38516779-38516798 | MS.gene038603:CDS | 35.0% | |
GAACCAGCAATTGTTAAAAG+AGG | + | chr8.3:38518658-38518677 | MS.gene038603:CDS | 35.0% | |
GATACTGAGGTAATCTATGT+GGG | + | chr8.3:38516659-38516678 | MS.gene038603:CDS | 35.0% | |
GATGTTGTAAAGTTGCTTGA+TGG | + | chr8.3:38519041-38519060 | MS.gene038603:CDS | 35.0% | |
GCCATCATAATCAAGAAAGA+TGG | - | chr8.3:38518139-38518158 | None:intergenic | 35.0% | |
GCCATCTTTCTTGATTATGA+TGG | + | chr8.3:38518135-38518154 | MS.gene038603:CDS | 35.0% | |
GCTTAACTTCAACAATATGC+TGG | - | chr8.3:38518684-38518703 | None:intergenic | 35.0% | |
GGAAACAAGTCATTTGTTTG+CGG | + | chr8.3:38518456-38518475 | MS.gene038603:CDS | 35.0% | |
GTAAGGGATGAAATTCTCAA+AGG | + | chr8.3:38517088-38517107 | MS.gene038603:CDS | 35.0% | |
TAACATCTGATTCACCATCA+AGG | - | chr8.3:38516496-38516515 | None:intergenic | 35.0% | |
TAAGCACAGATATGACTTCA+GGG | - | chr8.3:38518200-38518219 | None:intergenic | 35.0% | |
TACTCATGATGTGGCATATT+GGG | + | chr8.3:38517945-38517964 | MS.gene038603:CDS | 35.0% | |
TATGAATTTAGCCCTCAGTA+TGG | + | chr8.3:38517873-38517892 | MS.gene038603:CDS | 35.0% | |
TATTGTTGAAGTTAAGCCAC+AGG | + | chr8.3:38518687-38518706 | MS.gene038603:CDS | 35.0% | |
TCCGGTAAATTTCAGATGAT+GGG | - | chr8.3:38517060-38517079 | None:intergenic | 35.0% | |
TCTCAAAAGAAACCTGGAAT+TGG | - | chr8.3:38519106-38519125 | None:intergenic | 35.0% | |
TGAAATTGCTCAGAGATTAC+TGG | + | chr8.3:38516718-38516737 | MS.gene038603:CDS | 35.0% | |
TGAGAAGGTTCTCTTGAATA+TGG | + | chr8.3:38518836-38518855 | MS.gene038603:CDS | 35.0% | |
TGATACTGAGGTAATCTATG+TGG | + | chr8.3:38516658-38516677 | MS.gene038603:CDS | 35.0% | |
TGCTAAATGGTGTTTCAGTT+GGG | + | chr8.3:38516592-38516611 | MS.gene038603:CDS | 35.0% | |
TGCTGATACAATATGGTCAA+TGG | - | chr8.3:38518094-38518113 | None:intergenic | 35.0% | |
TGTGTTCATTGTTAGTGGAA+GGG | + | chr8.3:38518248-38518267 | MS.gene038603:CDS | 35.0% | |
TTAAGCACAGATATGACTTC+AGG | - | chr8.3:38518201-38518220 | None:intergenic | 35.0% | |
TTGAGAATTTCATCCCTTAC+TGG | - | chr8.3:38517088-38517107 | None:intergenic | 35.0% | |
TTGTGTTCATTGTTAGTGGA+AGG | + | chr8.3:38518247-38518266 | MS.gene038603:CDS | 35.0% | |
TTTACATCATGCAAACTGCT+GGG | + | chr8.3:38518294-38518313 | MS.gene038603:CDS | 35.0% | |
! | AATCTTTTAGACTTAGCTGG+TGG | + | chr8.3:38516398-38516417 | MS.gene038603:CDS | 35.0% |
! | ATCCCGATGATGATTTTGTT+TGG | + | chr8.3:38516945-38516964 | MS.gene038603:CDS | 35.0% |
! | ATGTTAGTTCTTCTGGATGT+CGG | + | chr8.3:38516510-38516529 | MS.gene038603:CDS | 35.0% |
! | GAATCAGATGTTAGTTCTTC+TGG | + | chr8.3:38516503-38516522 | MS.gene038603:CDS | 35.0% |
! | GCTAATCTTTTAGACTTAGC+TGG | + | chr8.3:38516395-38516414 | MS.gene038603:CDS | 35.0% |
! | TCCCATCATCTGAAATTTAC+CGG | + | chr8.3:38517056-38517075 | MS.gene038603:CDS | 35.0% |
! | TGATTTTGCCTACTTTCTTG+AGG | + | chr8.3:38516987-38517006 | MS.gene038603:CDS | 35.0% |
! | TTTAGCTTAGAGGATGTAGA+AGG | - | chr8.3:38517313-38517332 | None:intergenic | 35.0% |
!! | CAAGATAGAACTTTTTCTGC+AGG | - | chr8.3:38516781-38516800 | None:intergenic | 35.0% |
!! | CAATCTGAAATTTCTAGCTG+TGG | + | chr8.3:38517405-38517424 | MS.gene038603:CDS | 35.0% |
!! | CATTATACTAAAAGGTGCTG+GGG | + | chr8.3:38518009-38518028 | MS.gene038603:CDS | 35.0% |
!! | GGACGACATGGATATTTTTA+AGG | + | chr8.3:38517378-38517397 | MS.gene038603:CDS | 35.0% |
!! | TCCCGATGATGATTTTGTTT+GGG | + | chr8.3:38516946-38516965 | MS.gene038603:CDS | 35.0% |
!!! | CTGAATCTCTTTTAGCTTAG+AGG | - | chr8.3:38517323-38517342 | None:intergenic | 35.0% |
!!! | TTTGGGCTTTTGATTTGTTG+AGG | - | chr8.3:38519075-38519094 | None:intergenic | 35.0% |
ACAACTTCACCCTGCAAATT+TGG | - | chr8.3:38517451-38517470 | None:intergenic | 40.0% | |
ACTGGATGACTTTAATTGCG+TGG | + | chr8.3:38516736-38516755 | MS.gene038603:CDS | 40.0% | |
AGCATCTATCTCAACCTTGA+GGG | - | chr8.3:38516687-38516706 | None:intergenic | 40.0% | |
ATAACCCTTGGAAGACTTCT+TGG | - | chr8.3:38516449-38516468 | None:intergenic | 40.0% | |
ATAAGCACTCTTCTCGAAAC+GGG | - | chr8.3:38517620-38517639 | None:intergenic | 40.0% | |
ATCACCATGATCTGAGCATA+TGG | - | chr8.3:38516849-38516868 | None:intergenic | 40.0% | |
CAACTTCACCCTGCAAATTT+GGG | - | chr8.3:38517450-38517469 | None:intergenic | 40.0% | |
CTGCTAAATGGTGTTTCAGT+TGG | + | chr8.3:38516591-38516610 | MS.gene038603:CDS | 40.0% | |
GTACTCATGATGTGGCATAT+TGG | + | chr8.3:38517944-38517963 | MS.gene038603:CDS | 40.0% | |
GTCCGGTAAATTTCAGATGA+TGG | - | chr8.3:38517061-38517080 | None:intergenic | 40.0% | |
GTTTACATCATGCAAACTGC+TGG | + | chr8.3:38518293-38518312 | MS.gene038603:CDS | 40.0% | |
TAACCCTTGGAAGACTTCTT+GGG | - | chr8.3:38516448-38516467 | None:intergenic | 40.0% | |
TACCGTGCAAGCAAAAATCT+CGG | - | chr8.3:38518976-38518995 | None:intergenic | 40.0% | |
TAGCAAGAACACTTTCCAAG+TGG | - | chr8.3:38518636-38518655 | None:intergenic | 40.0% | |
TAGCATCTATCTCAACCTTG+AGG | - | chr8.3:38516688-38516707 | None:intergenic | 40.0% | |
TCAAGGTCAGAAATAATCCC+AGG | - | chr8.3:38516479-38516498 | None:intergenic | 40.0% | |
TCACCATGATCTGAGCATAT+GGG | - | chr8.3:38516848-38516867 | None:intergenic | 40.0% | |
TCGTATACAGAAGCAACTGA+TGG | + | chr8.3:38518517-38518536 | MS.gene038603:CDS | 40.0% | |
TCTTTACAGGGAGTAACCAA+AGG | + | chr8.3:38518804-38518823 | MS.gene038603:intron | 40.0% | |
TGAATTTAGCCCTCAGTATG+GGG | + | chr8.3:38517875-38517894 | MS.gene038603:CDS | 40.0% | |
TGATGTGCATTGGAGATGAT+AGG | + | chr8.3:38518886-38518905 | MS.gene038603:CDS | 40.0% | |
TGGAATTGGGCAAGATGTTT+GGG | - | chr8.3:38519092-38519111 | None:intergenic | 40.0% | |
TTGCATCGTCAATGCTGTAA+GGG | + | chr8.3:38517657-38517676 | MS.gene038603:CDS | 40.0% | |
! | ATATCTCTTTTAGCCTGCAG+CGG | - | chr8.3:38516566-38516585 | None:intergenic | 40.0% |
! | CTTGTTGTGTCTGAGTTCAT+TGG | + | chr8.3:38517784-38517803 | MS.gene038603:CDS | 40.0% |
! | GGTAGCATATAATGGAAGAG+AGG | - | chr8.3:38516827-38516846 | None:intergenic | 40.0% |
! | TGGCCTCTTTTAACAATTGC+TGG | - | chr8.3:38518664-38518683 | None:intergenic | 40.0% |
! | TGGGTTTTCTTCTGATACTG+AGG | + | chr8.3:38516646-38516665 | MS.gene038603:CDS | 40.0% |
! | TGTTAGTTCTTCTGGATGTC+GGG | + | chr8.3:38516511-38516530 | MS.gene038603:CDS | 40.0% |
!! | AACTTTTTCTGCAGGTCATG+GGG | - | chr8.3:38516773-38516792 | None:intergenic | 40.0% |
!! | ACGCAGTTTTATGCAGGATT+TGG | + | chr8.3:38517969-38517988 | MS.gene038603:CDS | 40.0% |
!! | AGAACTTTTTCTGCAGGTCA+TGG | - | chr8.3:38516775-38516794 | None:intergenic | 40.0% |
!! | GAACTTTTTCTGCAGGTCAT+GGG | - | chr8.3:38516774-38516793 | None:intergenic | 40.0% |
!! | GGGATTATTTCTGACCTTGA+TGG | + | chr8.3:38516479-38516498 | MS.gene038603:CDS | 40.0% |
!! | TGAAGTCAAGGAAAGTGCTT+TGG | + | chr8.3:38518549-38518568 | MS.gene038603:CDS | 40.0% |
!! | TTTGATTTGTTGAGGTAGCG+AGG | - | chr8.3:38519067-38519086 | None:intergenic | 40.0% |
AACCCTTGGAAGACTTCTTG+GGG | - | chr8.3:38516447-38516466 | None:intergenic | 45.0% | |
AATCTATGTGGGTTCCCTCA+AGG | + | chr8.3:38516670-38516689 | MS.gene038603:CDS | 45.0% | |
ACAACAAGCATGCTTGTACG+AGG | - | chr8.3:38517772-38517791 | None:intergenic | 45.0% | |
ACAGATATGACTTCAGGGCT+GGG | - | chr8.3:38518195-38518214 | None:intergenic | 45.0% | |
ACAGGGAGTAACCAAAGGTT+TGG | + | chr8.3:38518809-38518828 | MS.gene038603:intron | 45.0% | |
ACCGTGCAAGCAAAAATCTC+GGG | - | chr8.3:38518975-38518994 | None:intergenic | 45.0% | |
AGCAACTGCATCTATATCCC+AGG | - | chr8.3:38517848-38517867 | None:intergenic | 45.0% | |
ATAAATCCTGCAAGGGGTTC+AGG | + | chr8.3:38517484-38517503 | MS.gene038603:CDS | 45.0% | |
ATCGTCAATGCTGTAAGGGA+TGG | + | chr8.3:38517661-38517680 | MS.gene038603:CDS | 45.0% | |
ATGCACATCACGAAATCTGG+TGG | - | chr8.3:38518876-38518895 | None:intergenic | 45.0% | |
ATGGTGTTTCAGTTGGGATG+AGG | + | chr8.3:38516598-38516617 | MS.gene038603:CDS | 45.0% | |
CAAACATCTTGCCCAATTCC+AGG | + | chr8.3:38519091-38519110 | MS.gene038603:CDS | 45.0% | |
CAAAGAATTGCTGGACCACT+TGG | + | chr8.3:38518618-38518637 | MS.gene038603:CDS | 45.0% | |
CAAGGGTTATGACTGTTCCT+GGG | + | chr8.3:38516459-38516478 | MS.gene038603:CDS | 45.0% | |
CAAGTGGTCCAGCAATTCTT+TGG | - | chr8.3:38518620-38518639 | None:intergenic | 45.0% | |
CAGCAGAACCCAAATTTGCA+GGG | + | chr8.3:38517439-38517458 | MS.gene038603:CDS | 45.0% | |
CCAATGCACATCACGAAATC+TGG | - | chr8.3:38518879-38518898 | None:intergenic | 45.0% | |
CCAGATTTCGTGATGTGCAT+TGG | + | chr8.3:38518876-38518895 | MS.gene038603:CDS | 45.0% | |
CTACCCATATGCTCAGATCA+TGG | + | chr8.3:38516842-38516861 | MS.gene038603:CDS | 45.0% | |
CTACCCATGTGAATTCCTAC+CGG | - | chr8.3:38517268-38517287 | None:intergenic | 45.0% | |
CTGGAATTGGGCAAGATGTT+TGG | - | chr8.3:38519093-38519112 | None:intergenic | 45.0% | |
CTGGACTATGAATCTAAGCG+CGG | + | chr8.3:38517193-38517212 | MS.gene038603:CDS | 45.0% | |
CTGTGCTCTCAAAAGAAACC+TGG | - | chr8.3:38519112-38519131 | None:intergenic | 45.0% | |
CTTCTCAGCTACCAAACCTT+TGG | - | chr8.3:38518823-38518842 | None:intergenic | 45.0% | |
GAATCTAAGCGCGGACATAT+AGG | + | chr8.3:38517202-38517221 | MS.gene038603:CDS | 45.0% | |
GAATTTAGCCCTCAGTATGG+GGG | + | chr8.3:38517876-38517895 | MS.gene038603:CDS | 45.0% | |
GACTGAGGAGGAAGAAACAA+AGG | - | chr8.3:38518358-38518377 | None:intergenic | 45.0% | |
GCAACTGCATCTATATCCCA+GGG | - | chr8.3:38517847-38517866 | None:intergenic | 45.0% | |
GGATCTTGATTGGAAACAGG+TGG | + | chr8.3:38518477-38518496 | MS.gene038603:CDS | 45.0% | |
GTGGAATAGCGACTCTGAAT+GGG | + | chr8.3:38518435-38518454 | MS.gene038603:CDS | 45.0% | |
GTTGCATCGTCAATGCTGTA+AGG | + | chr8.3:38517656-38517675 | MS.gene038603:CDS | 45.0% | |
GTTGTTCACCTTCTCTGAGT+GGG | + | chr8.3:38517806-38517825 | MS.gene038603:CDS | 45.0% | |
TAAATCCTGCAAGGGGTTCA+GGG | + | chr8.3:38517485-38517504 | MS.gene038603:CDS | 45.0% | |
TAAGCACTCTTCTCGAAACG+GGG | - | chr8.3:38517619-38517638 | None:intergenic | 45.0% | |
TCGTCAATGCTGTAAGGGAT+GGG | + | chr8.3:38517662-38517681 | MS.gene038603:CDS | 45.0% | |
TCTGTATACGACTGCATGAC+AGG | - | chr8.3:38518508-38518527 | None:intergenic | 45.0% | |
TCTTGCTGCAGTAGAATGCT+AGG | + | chr8.3:38517169-38517188 | MS.gene038603:CDS | 45.0% | |
TGAGATAGATGCTAGTGAGC+AGG | + | chr8.3:38516694-38516713 | MS.gene038603:CDS | 45.0% | |
TGCGGATCTTGATTGGAAAC+AGG | + | chr8.3:38518474-38518493 | MS.gene038603:CDS | 45.0% | |
TTACCGGACTTTGCCAGTAA+GGG | + | chr8.3:38517072-38517091 | MS.gene038603:CDS | 45.0% | |
TTGCCGGTAGGAATTCACAT+GGG | + | chr8.3:38517262-38517281 | MS.gene038603:CDS | 45.0% | |
TTGTTCACCTTCTCTGAGTG+GGG | + | chr8.3:38517807-38517826 | MS.gene038603:CDS | 45.0% | |
TTTACCGGACTTTGCCAGTA+AGG | + | chr8.3:38517071-38517090 | MS.gene038603:CDS | 45.0% | |
TTTGCCGGTAGGAATTCACA+TGG | + | chr8.3:38517261-38517280 | MS.gene038603:CDS | 45.0% | |
! | ATGATGGGAAAGGACTGTGA+AGG | - | chr8.3:38517045-38517064 | None:intergenic | 45.0% |
! | CAAAGGTTTGGTAGCTGAGA+AGG | + | chr8.3:38518821-38518840 | MS.gene038603:CDS | 45.0% |
! | CAAGATGCAGACCCTGATTT+TGG | + | chr8.3:38518583-38518602 | MS.gene038603:CDS | 45.0% |
! | GAGATTTTTGCTTGCACGGT+AGG | + | chr8.3:38518975-38518994 | MS.gene038603:CDS | 45.0% |
! | GAGCGGTCAATGATAATGAC+TGG | - | chr8.3:38517592-38517611 | None:intergenic | 45.0% |
! | GTTTTTGTAAGCAGCAGCTC+TGG | + | chr8.3:38516801-38516820 | MS.gene038603:CDS | 45.0% |
! | TATTCTTGGTGTGGACGACA+TGG | + | chr8.3:38517366-38517385 | MS.gene038603:CDS | 45.0% |
! | TCCCGAGATTTTTGCTTGCA+CGG | + | chr8.3:38518971-38518990 | MS.gene038603:CDS | 45.0% |
! | TTTTTGCTTGCACGGTAGGT+AGG | + | chr8.3:38518979-38518998 | MS.gene038603:CDS | 45.0% |
!! | ACTAAAAGGTGCTGGGGAAT+TGG | + | chr8.3:38518015-38518034 | MS.gene038603:CDS | 45.0% |
!! | CACGAAATCTGGTGGATTAC+CGG | - | chr8.3:38518868-38518887 | None:intergenic | 45.0% |
!! | TCAAGGAAAGTGCTTTGGTG+TGG | + | chr8.3:38518554-38518573 | MS.gene038603:CDS | 45.0% |
ACACCCCAAGAAGTCTTCCA+AGG | + | chr8.3:38516441-38516460 | MS.gene038603:CDS | 50.0% | |
AGATATGACTTCAGGGCTGG+GGG | - | chr8.3:38518193-38518212 | None:intergenic | 50.0% | |
ATCGCTTTGACCGAGTGCTT+TGG | + | chr8.3:38516867-38516886 | MS.gene038603:CDS | 50.0% | |
CACAGATATGACTTCAGGGC+TGG | - | chr8.3:38518196-38518215 | None:intergenic | 50.0% | |
CACCCCAAGAAGTCTTCCAA+GGG | + | chr8.3:38516442-38516461 | MS.gene038603:CDS | 50.0% | |
CAGATATGACTTCAGGGCTG+GGG | - | chr8.3:38518194-38518213 | None:intergenic | 50.0% | |
CATCCCTTACTGGCAAAGTC+CGG | - | chr8.3:38517078-38517097 | None:intergenic | 50.0% | |
CCAAGGGTTATGACTGTTCC+TGG | + | chr8.3:38516458-38516477 | MS.gene038603:CDS | 50.0% | |
CCAGGAACAGTCATAACCCT+TGG | - | chr8.3:38516461-38516480 | None:intergenic | 50.0% | |
CGGTAGGAATTCACATGGGT+AGG | + | chr8.3:38517266-38517285 | MS.gene038603:CDS | 50.0% | |
CTCAGAAACCCCCATACTGA+GGG | - | chr8.3:38517887-38517906 | None:intergenic | 50.0% | |
CTGCAGTAGAATGCTAGGTC+TGG | + | chr8.3:38517174-38517193 | MS.gene038603:CDS | 50.0% | |
CTGCCAAGCCAAAGAATTGC+TGG | + | chr8.3:38518609-38518628 | MS.gene038603:CDS | 50.0% | |
CTTGGCAGGAGCCAAAATCA+GGG | - | chr8.3:38518597-38518616 | None:intergenic | 50.0% | |
GCAAAAATCTCGGGAGCTGA+TGG | - | chr8.3:38518966-38518985 | None:intergenic | 50.0% | |
GCAAAGCTGGATGAAGCTGT+GGG | + | chr8.3:38517730-38517749 | MS.gene038603:CDS | 50.0% | |
GCAGCAGAACCCAAATTTGC+AGG | + | chr8.3:38517438-38517457 | MS.gene038603:CDS | 50.0% | |
GGTCCAGCAATTCTTTGGCT+TGG | - | chr8.3:38518615-38518634 | None:intergenic | 50.0% | |
GGTGGAATAGCGACTCTGAA+TGG | + | chr8.3:38518434-38518453 | MS.gene038603:intron | 50.0% | |
GGTTGTTCACCTTCTCTGAG+TGG | + | chr8.3:38517805-38517824 | MS.gene038603:CDS | 50.0% | |
TCGGGAGCGGAAAATCATTG+TGG | + | chr8.3:38516529-38516548 | MS.gene038603:CDS | 50.0% | |
TCTCAGAAACCCCCATACTG+AGG | - | chr8.3:38517888-38517907 | None:intergenic | 50.0% | |
TGCAAAGCTGGATGAAGCTG+TGG | + | chr8.3:38517729-38517748 | MS.gene038603:CDS | 50.0% | |
! | CATAAGCCTGCCAAAGCACT+CGG | - | chr8.3:38516880-38516899 | None:intergenic | 50.0% |
! | TTCTTTTGGTGGGGTGACTG+AGG | - | chr8.3:38518373-38518392 | None:intergenic | 50.0% |
!! | CAGCAATTCTTTGGCTTGGC+AGG | - | chr8.3:38518611-38518630 | None:intergenic | 50.0% |
!! | TTGGGCACGCAGTTTTATGC+AGG | + | chr8.3:38517963-38517982 | MS.gene038603:CDS | 50.0% |
ATCCCAGGGATTGACCCTGA+TGG | - | chr8.3:38517833-38517852 | None:intergenic | 55.0% | |
CAGACAGGGAACTGCAAAGC+TGG | + | chr8.3:38517717-38517736 | MS.gene038603:CDS | 55.0% | |
CAGGTCATGGGGTAGAAAGG+TGG | - | chr8.3:38516762-38516781 | None:intergenic | 55.0% | |
CTGCAGGTCATGGGGTAGAA+AGG | - | chr8.3:38516765-38516784 | None:intergenic | 55.0% | |
CTGGGACTTGCAGCTGAACA+TGG | + | chr8.3:38518312-38518331 | MS.gene038603:CDS | 55.0% | |
CTTTGACCGAGTGCTTTGGC+AGG | + | chr8.3:38516871-38516890 | MS.gene038603:CDS | 55.0% | |
GCTTGGCAGGAGCCAAAATC+AGG | - | chr8.3:38518598-38518617 | None:intergenic | 55.0% | |
GGAAGACTTCTTGGGGTGTG+AGG | - | chr8.3:38516440-38516459 | None:intergenic | 55.0% | |
GGGTTCAGGGAAGGATGTTC+AGG | + | chr8.3:38517498-38517517 | MS.gene038603:CDS | 55.0% | |
GGTAGGTAGGAAGCCTAGCA+AGG | + | chr8.3:38518992-38519011 | MS.gene038603:CDS | 55.0% | |
GTTCTTCTGGATGTCGGGAG+CGG | + | chr8.3:38516516-38516535 | MS.gene038603:CDS | 55.0% | |
TCTCGAAACGGGGAACAGAG+CGG | - | chr8.3:38517609-38517628 | None:intergenic | 55.0% | |
TTCTCTGAGTGGGGCCATCA+GGG | + | chr8.3:38517816-38517835 | MS.gene038603:CDS | 55.0% | |
! | TCGGGAGCTGATGGTAACGA+CGG | - | chr8.3:38518957-38518976 | None:intergenic | 55.0% |
! | TGGGGAATTGGTCTGGGCTT+GGG | + | chr8.3:38518027-38518046 | MS.gene038603:CDS | 55.0% |
! | TTTTGGTGGGGTGACTGAGG+AGG | - | chr8.3:38518370-38518389 | None:intergenic | 55.0% |
!! | AAGGTGCTGGGGAATTGGTC+TGG | + | chr8.3:38518020-38518039 | MS.gene038603:CDS | 55.0% |
!! | AGGTGCTGGGGAATTGGTCT+GGG | + | chr8.3:38518021-38518040 | MS.gene038603:CDS | 55.0% |
CTGATGGCCCCACTCAGAGA+AGG | - | chr8.3:38517817-38517836 | None:intergenic | 60.0% | |
CTTCTCTGAGTGGGGCCATC+AGG | + | chr8.3:38517815-38517834 | MS.gene038603:CDS | 60.0% | |
GGCAAACATGTTGCCGCTGC+AGG | + | chr8.3:38516550-38516569 | MS.gene038603:CDS | 60.0% | |
GGCCATCAGGGTCAATCCCT+GGG | + | chr8.3:38517828-38517847 | MS.gene038603:CDS | 60.0% | |
TCCTGCAAGGGGTTCAGGGA+AGG | + | chr8.3:38517489-38517508 | MS.gene038603:CDS | 60.0% | |
TCCTTCCCTGAACCCCTTGC+AGG | - | chr8.3:38517493-38517512 | None:intergenic | 60.0% | |
! | CGGGAGCTGATGGTAACGAC+GGG | - | chr8.3:38518956-38518975 | None:intergenic | 60.0% |
! | CTGGGGAATTGGTCTGGGCT+TGG | + | chr8.3:38518026-38518045 | MS.gene038603:CDS | 60.0% |
! | GGGGAATTGGTCTGGGCTTG+GGG | + | chr8.3:38518028-38518047 | MS.gene038603:CDS | 60.0% |
GGGCCATCAGGGTCAATCCC+TGG | + | chr8.3:38517827-38517846 | MS.gene038603:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 38516377 | 38519139 | 38516377 | ID=MS.gene038603 |
chr8.3 | mRNA | 38516377 | 38519139 | 38516377 | ID=MS.gene038603.t1;Parent=MS.gene038603 |
chr8.3 | exon | 38516377 | 38518346 | 38516377 | ID=MS.gene038603.t1.exon1;Parent=MS.gene038603.t1 |
chr8.3 | CDS | 38516377 | 38518346 | 38516377 | ID=cds.MS.gene038603.t1;Parent=MS.gene038603.t1 |
chr8.3 | exon | 38518435 | 38518708 | 38518435 | ID=MS.gene038603.t1.exon2;Parent=MS.gene038603.t1 |
chr8.3 | CDS | 38518435 | 38518708 | 38518435 | ID=cds.MS.gene038603.t1;Parent=MS.gene038603.t1 |
chr8.3 | exon | 38518813 | 38519139 | 38518813 | ID=MS.gene038603.t1.exon3;Parent=MS.gene038603.t1 |
chr8.3 | CDS | 38518813 | 38519139 | 38518813 | ID=cds.MS.gene038603.t1;Parent=MS.gene038603.t1 |
Gene Sequence |
Protein sequence |